
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0253.14
(346 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC18667 weakly similar to UP|Q9C9F2 (Q9C9F2) MtN21-like protein,... 508 e-145
TC8070 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (73%) 128 4e-43
TC16237 weakly similar to UP|Q84TV1 (Q84TV1) Nodulin-like protei... 150 2e-37
CB828366 121 3e-36
BP073083 123 4e-29
BI419330 113 4e-26
TC19268 similar to UP|Q9C9F2 (Q9C9F2) MtN21-like protein, partia... 107 3e-24
TC16483 homologue to UP|O24091 (O24091) MtN21 protein, partial (... 103 6e-23
TC12488 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (47%) 94 3e-20
TC19992 similar to UP|Q8LE45 (Q8LE45) Nodulin-like protein, part... 80 5e-16
TC16612 similar to UP|Q9SUF0 (Q9SUF0) Nodulin-like protein, part... 77 6e-15
TC17447 weakly similar to UP|Q8L9I2 (Q8L9I2) Nodulin MtN21-like ... 76 9e-15
BF177642 74 5e-14
TC9020 weakly similar to PIR|H84792|H84792 nodulin-like protein ... 69 1e-12
BI419045 61 2e-10
TC19785 weakly similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (... 60 7e-10
AV422152 55 1e-08
TC13120 weakly similar to UP|Q8LRB6 (Q8LRB6) Nodulin-like protei... 54 5e-08
TC11191 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (9%) 50 6e-07
TC17799 weakly similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (8%) 48 2e-06
>TC18667 weakly similar to UP|Q9C9F2 (Q9C9F2) MtN21-like protein, partial
(27%)
Length = 911
Score = 508 bits (1308), Expect = e-145
Identities = 252/310 (81%), Positives = 283/310 (91%)
Frame = +3
Query: 33 YFFSSAFMVPLAYFVERERKPKITMKVLFQAFLCGLFGATIQQNLFVEGVALAGATYATA 92
Y FSSAFM+PLAYF ER+ KPKITMKVLFQAFLCGLFGATIQ+NLFVE V AGATY +A
Sbjct: 3 YLFSSAFMIPLAYFAERKSKPKITMKVLFQAFLCGLFGATIQENLFVEAVTWAGATYPSA 182
Query: 93 MLERLNIKTKTGKAKVLGPLVGVSGAMILTFYRSIEIHLWPTIVNLMKNKPKNAATSHIF 152
MLERLNI+TKTGKAKV+G L+G+SGAMILTFY+SIEIHLWPTIVN ++KPK+ AT H++
Sbjct: 183 MLERLNIETKTGKAKVVGTLIGISGAMILTFYKSIEIHLWPTIVN--QSKPKDVATGHVW 356
Query: 153 GTSLAFGTCLSYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFAVCMERDNWSRWK 212
GTSLAFGTC+SYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFA+ MERDNWS+WK
Sbjct: 357 GTSLAFGTCISYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFALGMERDNWSQWK 536
Query: 213 LGWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKL 272
LGWNI+L TA+Y GVVASG+ WVL AW LRLKGPLYAS+FNPL LVIVAIAGSLFL+EKL
Sbjct: 537 LGWNIELLTALYTGVVASGVVWVLMAWCLRLKGPLYASAFNPLLLVIVAIAGSLFLEEKL 716
Query: 273 YLGSVIGALLIVLGLYIVLWGKGKELKSNVEQKHKNDPLEEVEPLEIVTTKQINGKSADD 332
YLGS+IG++LIVLGLYIVLWGKGKELKS++EQKHKND + EVEPLEIVTTKQI+GK+ D
Sbjct: 717 YLGSIIGSILIVLGLYIVLWGKGKELKSHMEQKHKNDSV-EVEPLEIVTTKQIDGKNVD- 890
Query: 333 KSVDDGNDIK 342
DGND+K
Sbjct: 891 ---IDGNDLK 911
>TC8070 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (73%)
Length = 1758
Score = 128 bits (321), Expect(2) = 4e-43
Identities = 76/228 (33%), Positives = 121/228 (52%), Gaps = 14/228 (6%)
Frame = +1
Query: 90 ATAMLERLNIKTKTGKAKVLGPLVGVSGAMILTFYRSIEIHL-WPTIVNLMKNKPKNAAT 148
A +E++ + K G AKV G + V GA ++T Y+ I+ P + +++ P+
Sbjct: 451 AILRIEQVRLNRKDGIAKVAGTVFCVIGASVITLYKGPTIYSPVPPLNSIITPHPQTQLL 630
Query: 149 SHI-------------FGTSLAFGTCLSYSIWLIIQARMSAKFPWHYTSAALMSVMACIQ 195
+ G G CLS+S WL++QA + K+P + + IQ
Sbjct: 631 GSVSLSLGDANGKNWTLGCLYLIGHCLSWSGWLVLQAPILKKYPARLSVTSYTCFFGLIQ 810
Query: 196 STIFAVCMERDNWSRWKLGWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPL 255
+ A+ +ERD + W ++FT +Y GVVASGI + + W + GP++ + + P+
Sbjct: 811 FLVIALIVERDAQA-WIFHSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPV 987
Query: 256 FLVIVAIAGSLFLDEKLYLGSVIGALLIVLGLYIVLWGKGKELKSNVE 303
++VAI SL L E+ YLG +IGA+LIV+GLY+VLWGK E K +E
Sbjct: 988 QTLVVAIMASLALGEEFYLGGIIGAILIVVGLYLVLWGKNAERKFAME 1131
Score = 63.2 bits (152), Expect(2) = 4e-43
Identities = 30/90 (33%), Positives = 50/90 (55%)
Frame = +3
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
M+ +QF +AG ++ + + G+S V YR + ++P AYF+E++ +P IT+ L
Sbjct: 135 MLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFL 314
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYA 90
FQ FL L G T Q ++ G+ T+A
Sbjct: 315 FQFFLLALVGITANQGFYLLGLDNTSPTFA 404
>TC16237 weakly similar to UP|Q84TV1 (Q84TV1) Nodulin-like protein, partial
(11%)
Length = 695
Score = 150 bits (380), Expect = 2e-37
Identities = 85/130 (65%), Positives = 99/130 (75%), Gaps = 1/130 (0%)
Frame = +3
Query: 214 GWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKLY 273
GWNIK F+ ++ V + WVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKLY
Sbjct: 9 GWNIK-FSLQFMWVCSFWNTWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKLY 185
Query: 274 LGSVIGALLIVLGLYIVLWG-KGKELKSNVEQKHKNDPLEEVEPLEIVTTKQINGKSADD 332
LGSVIGALLIVL + G K K ++ + Q K L+++ LEIVTT I+GKS DD
Sbjct: 186 LGSVIGALLIVLXAIXLSCGVKVKS*RAMLSQSIKMTHLQKLNXLEIVTTSPIHGKSDDD 365
Query: 333 KSVDDGNDIK 342
KSVDDGND++
Sbjct: 366 KSVDDGNDMQ 395
>CB828366
Length = 568
Score = 121 bits (303), Expect(2) = 3e-36
Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 94 LERLNIKTKTGKAKVLGPLVGVSGAMILTFYRSIEIHLWPTIVNLMKN-KPKNAATSHIF 152
LE+ N+ T+ GKAK+LG L GV GAMILT Y I WP ++L K P A S ++
Sbjct: 204 LEKPNLGTRAGKAKLLGTLTGVGGAMILTLYEGRRIFNWPLHIDLSKYMSPPPANGSRLW 383
Query: 153 GTSLAFGTCLSYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFAVCMERDNWSRWK 212
G LA GT L +S+W I+QA MS KFPW Y+ AAL SVM+ IQS I+A+C ERD WS+ K
Sbjct: 384 GLILALGTSLCFSLWYIVQANMSQKFPWQYSVAALTSVMSAIQSIIYALCTERD-WSQCK 560
Query: 213 L 213
+
Sbjct: 561 V 563
Score = 47.4 bits (111), Expect(2) = 3e-36
Identities = 22/38 (57%), Positives = 28/38 (72%)
Frame = +1
Query: 42 PLAYFVERERKPKITMKVLFQAFLCGLFGATIQQNLFV 79
P+A ER+ IT VLFQAFLCGLFG ++QQNL++
Sbjct: 1 PVALLFERKSMQHITGIVLFQAFLCGLFGGSLQQNLYL 114
>BP073083
Length = 352
Score = 123 bits (309), Expect = 4e-29
Identities = 60/84 (71%), Positives = 72/84 (85%)
Frame = -2
Query: 226 GVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKLYLGSVIGALLIVL 285
G VASG+ WVL AW LRLKGPL AS+F+PL LV+VA+ GSLF + KLYLGS+IG++LIVL
Sbjct: 348 GGVASGVVWVLMAWCLRLKGPL*ASAFHPLLLVLVALPGSLFFEGKLYLGSIIGSILIVL 169
Query: 286 GLYIVLWGKGKELKSNVEQKHKND 309
GLY+VLWG GKELKS++E KH ND
Sbjct: 168 GLYLVLWG*GKELKSHMEPKH*ND 97
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/62 (41%), Positives = 35/62 (55%)
Frame = -3
Query: 283 IVLGLYIVLWGKGKELKSNVEQKHKNDPLEEVEPLEIVTTKQINGKSADDKSVDDGNDIK 342
+ LG + K K ++ Q K P+ VEPLEIVTT I+GK+ D DG+D+K
Sbjct: 176 LCLGYTLSCGVKVKN*RAIWSQSIKMTPVA-VEPLEIVTTNPIDGKNVD----IDGHDLK 12
Query: 343 CG 344
CG
Sbjct: 11 CG 6
>BI419330
Length = 470
Score = 113 bits (283), Expect = 4e-26
Identities = 52/137 (37%), Positives = 86/137 (61%)
Frame = +1
Query: 164 YSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFAVCMERDNWSRWKLGWNIKLFTAV 223
+S + I+QA K+P + A + + +QS+ + ME + + W LG + KLF
Sbjct: 22 FSAFYILQAITLRKYPAEMSLATWICFVGALQSSALTIFMEHHDPAAWSLGLDSKLFACA 201
Query: 224 YVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDEKLYLGSVIGALLI 283
Y G+V S + + + V++ KGP++ ++FNPL ++IV + L EKLYLGS+IG +++
Sbjct: 202 YSGIVTSAVQFYVQGTVIKTKGPVFVTAFNPLRMIIVTALACILLSEKLYLGSLIGGVVV 381
Query: 284 VLGLYIVLWGKGKELKS 300
V+GLY+V+WGK KE K+
Sbjct: 382 VMGLYLVVWGKAKEQKN 432
>TC19268 similar to UP|Q9C9F2 (Q9C9F2) MtN21-like protein, partial (8%)
Length = 505
Score = 107 bits (267), Expect = 3e-24
Identities = 60/129 (46%), Positives = 80/129 (61%), Gaps = 9/129 (6%)
Frame = +2
Query: 105 KAKVLGPLVGVSGAMILTFYRSIEIHLWPTIVNLMKNKPKNAATSHIFGT---------S 155
KAK++G + G+ GAM+LT + EI + VNL+ P N H GT S
Sbjct: 2 KAKIVGTITGIGGAMVLTLVKGKEIKIESFHVNLLH--PXNGTHPHAGGTGENLLGALCS 175
Query: 156 LAFGTCLSYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFAVCMERDNWSRWKLGW 215
LA GT SYS+WLIIQ +M+ ++ HYTS ALMS A + S +FA+ +ERD WS+W+LGW
Sbjct: 176 LASGT--SYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERD-WSQWRLGW 346
Query: 216 NIKLFTAVY 224
NI+L T Y
Sbjct: 347 NIRLLTVAY 373
>TC16483 homologue to UP|O24091 (O24091) MtN21 protein, partial (24%)
Length = 739
Score = 103 bits (256), Expect = 6e-23
Identities = 44/87 (50%), Positives = 65/87 (74%)
Frame = +1
Query: 211 WKLGWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDE 270
W +GW++ L A Y G+V S I + + V+R KGP++A++F+PL ++IVAI GS L E
Sbjct: 1 WTIGWDMNLLAAAYAGIVTSSISYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAE 180
Query: 271 KLYLGSVIGALLIVLGLYIVLWGKGKE 297
+++LG +IG++LIV+GLY VLWGK KE
Sbjct: 181 QIFLGGIIGSILIVIGLYSVLWGKHKE 261
>TC12488 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (47%)
Length = 887
Score = 94.4 bits (233), Expect = 3e-20
Identities = 64/244 (26%), Positives = 110/244 (44%), Gaps = 38/244 (15%)
Frame = +1
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
M+ +QF +AG ++ + + G+S V YR + ++P AYF+E++ +P IT+ L
Sbjct: 157 MLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFL 336
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYATAM----------------LERLNIKTKTG 104
Q F L G T Q ++ G+ T+A+A+ +E++ + K G
Sbjct: 337 VQFFFLALVGITANQAFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDG 516
Query: 105 KAKVLGPLVGVSGAMILTFYRSIEIHLWPTIVNLMKNKP---KNAATSHIFGTSLAF--- 158
AK+ G + V GA ++T Y+ PTI N P ++ T+ + S +F
Sbjct: 517 IAKIAGTVFCVVGASVITLYKG------PTIYNPSPAVPHVNSSSITAPVIEESWSFSSL 678
Query: 159 ----------------GTCLSYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFAVC 202
G CLS+S WL++QA + K+P + + +Q + A+
Sbjct: 679 GDANGKNWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALV 858
Query: 203 MERD 206
ERD
Sbjct: 859 AERD 870
>TC19992 similar to UP|Q8LE45 (Q8LE45) Nodulin-like protein, partial (46%)
Length = 615
Score = 80.1 bits (196), Expect = 5e-16
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
Frame = +2
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
+V IQ +AG+ +L K + GMS VL+ YR+ + M P A ++++ +PK+T +
Sbjct: 59 VVFIQSGYAGMDVLCKAALNNGMSNYVLVVYRHAVAFVVMAPFALILDKKIRPKMTFSIF 238
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYATAM----------------LERLNIKTKTG 104
+ L I QNL+ G+ AT+A +M LE++ IK+
Sbjct: 239 VKIVALSLLEPVIDQNLYYLGMKYTTATFAVSMYNILPAITFLMAYILKLEKIKIKSIRS 418
Query: 105 KAKVLGPLVGVSGAMILTFYRSIEIHLWPT 134
+AKV G L V+GAM++T + E+ L+ T
Sbjct: 419 QAKVFGTLATVAGAMVMTLIKGPELELFGT 508
>TC16612 similar to UP|Q9SUF0 (Q9SUF0) Nodulin-like protein, partial (39%)
Length = 589
Score = 76.6 bits (187), Expect = 6e-15
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Frame = +3
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
MV +QF +AG+ I+ + GMS VL YR+ + FM P A +ER+ +PK+T+ V
Sbjct: 174 MVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHIIAFCFMAPFALVLERKIRPKMTLPVF 353
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYATA----------------MLERLNIKTKTG 104
+ + G + QNL+ G+ T+A+A LE +N K
Sbjct: 354 LRLVVLGFLEPVLDQNLYNMGMKNTSTTFASATINVLPAITFVLALIFRLETVNFKKIHS 533
Query: 105 KAKVLGPLVGVSGAMILT 122
AKV+G +V VSGAM++T
Sbjct: 534 VAKVIGTVVTVSGAMVMT 587
>TC17447 weakly similar to UP|Q8L9I2 (Q8L9I2) Nodulin MtN21-like protein,
partial (24%)
Length = 590
Score = 75.9 bits (185), Expect = 9e-15
Identities = 41/109 (37%), Positives = 61/109 (55%)
Frame = +3
Query: 209 SRWKLGWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFL 268
S WK+G N L + + G+ S + + +L LKG +Y + F PL + I + G +FL
Sbjct: 36 SVWKIGLNTALASILCSGIFGSILNLAVHTHMLHLKGAVYVAMFKPLSIAIAVVLGVMFL 215
Query: 269 DEKLYLGSVIGALLIVLGLYIVLWGKGKELKSNVEQKHKNDPLEEVEPL 317
+ L+LGSVIGA +I +G Y V+WGK E +V + + P E PL
Sbjct: 216 GDTLHLGSVIGATVISIGFYTVMWGKATEEVDDVPR--QEPPTTENAPL 356
>BF177642
Length = 482
Score = 73.6 bits (179), Expect = 5e-14
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +1
Query: 211 WKLGWNIKLFTAVYVGVVASGIPWVLTAWVLRLKGPLYASSFNPLFLVIVAIAGSLFLDE 270
W L + +L Y + + V+ AW R KGP+Y + F+PL +VI + G LFL +
Sbjct: 106 WILRPDKELVAVCYSAIFVVTMRSVVYAWAFRKKGPIYVAMFSPLGMVIAVVLGVLFLGD 285
Query: 271 KLYLGSVIGALLIVLGLYIVLWGKGKE 297
LYLGS+IGA++I +G Y V+W + +E
Sbjct: 286 ILYLGSLIGAVIIAIGFYGVIWAQAQE 366
>TC9020 weakly similar to PIR|H84792|H84792 nodulin-like protein [imported]
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(16%)
Length = 759
Score = 68.9 bits (167), Expect = 1e-12
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +3
Query: 250 SSFNPLFLVIVAIAGSLFLDEKLYLGSVIGALLIVLGLYIVLWGKGKELKSNVEQKHKND 309
++FNPL +VIVAI GS L E++YLG VIGA++I+LGLY+V+WGK K+ S
Sbjct: 3 TAFNPLCMVIVAILGSFCLAEQMYLGRVIGAIVILLGLYLVVWGKNKDYDS--------- 155
Query: 310 PLEEVEPLEIVTTKQINGKSADDKSVDDGNDI 341
P + ++ KQ +A DK +++
Sbjct: 156 PPSPIINEHVLPDKQTTESNAKDKEKPSNHEL 251
>BI419045
Length = 370
Score = 61.2 bits (147), Expect = 2e-10
Identities = 30/92 (32%), Positives = 50/92 (53%)
Frame = +3
Query: 10 GVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVLFQAFLCGLF 69
G+ +L K + GMS VL+ YR+ + M P A +++ +PK+T + + L
Sbjct: 93 GMDVLCKAALNNGMSNYVLVVYRHVVAFVVMAPFALILDKNIRPKMTFSIFVKIVALSLL 272
Query: 70 GATIQQNLFVEGVALAGATYATAMLERLNIKT 101
I QNL+ G+ AT+A +MLE++ IK+
Sbjct: 273 EPVIAQNLYFLGMKYTTATFAVSMLEKIKIKS 368
>TC19785 weakly similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (16%)
Length = 514
Score = 59.7 bits (143), Expect = 7e-10
Identities = 29/68 (42%), Positives = 45/68 (65%)
Frame = +2
Query: 245 GPLYASSFNPLFLVIVAIAGSLFLDEKLYLGSVIGALLIVLGLYIVLWGKGKELKSNVEQ 304
GP+ AS + PL ++VA+ S+ E +LG +IGA LI+ GLY+V+WG+ +E KS Q
Sbjct: 5 GPVLASIYLPLQTLLVALMSSIVFGEDFFLGGIIGAFLIMTGLYLVVWGRTQETKS--AQ 178
Query: 305 KHKNDPLE 312
++ P+E
Sbjct: 179 EYMKVPIE 202
>AV422152
Length = 465
Score = 55.5 bits (132), Expect = 1e-08
Identities = 26/97 (26%), Positives = 53/97 (53%)
Frame = +2
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
+V +QF ++G+ ++ + GMS +L YR+ + + P A+ +ER+ +PK+T+ +
Sbjct: 122 IVSLQFGYSGMYVITMVSFKHGMSHWILSVYRHVVALIIIAPFAFVLERKIRPKMTLPIF 301
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYATAMLERL 97
+ G + QNL+ G+ + T+A+A + L
Sbjct: 302 LRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVL 412
>TC13120 weakly similar to UP|Q8LRB6 (Q8LRB6) Nodulin-like protein, partial
(22%)
Length = 609
Score = 53.5 bits (127), Expect = 5e-08
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Frame = +3
Query: 1 MVLIQFIFAGVSILFKLVASTGMSLTVLMAYRYFFSSAFMVPLAYFVERERKPKITMKVL 60
++ +QF AG+ I GMS V + YR ++ + P A+ +ER+ +PK++++V
Sbjct: 105 LLAVQFGSAGMFIFAMDAMKKGMSHYVFIVYRNAIAAITLSPFAFVLERKIRPKMSVRVF 284
Query: 61 FQAFLCGLFGATIQQNLFVEGVALAGATYATAM----------------LERLNIKTKTG 104
+ F + Q + G+ L A++ +A+ +E + IK
Sbjct: 285 AEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNAAPSITFVMAVVLKMEHMKIKEVAC 464
Query: 105 KAKVLGPLVGVSGAMILTFYR 125
+AK++G V G +++ Y+
Sbjct: 465 QAKMIGTAVTFGGTLLMALYK 527
>TC11191 similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (9%)
Length = 544
Score = 50.1 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 268 LDEKLYLGSVIGALLIVLGLYIVLWGKGKELKSNVEQ 304
L E+ YLG +IGA+LIV+GLY+VLWGK +E K EQ
Sbjct: 2 LGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKIIKEQ 112
>TC17799 weakly similar to UP|Q9LQZ3 (Q9LQZ3) F10A5.28, partial (8%)
Length = 497
Score = 48.1 bits (113), Expect = 2e-06
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 273 YLGSVIGALLIVLGLYIVLWGKGKELKSNVEQKHKNDPLEEVEPLEIVTTKQINGKSADD 332
Y+GS+IGA+LIV GLY V+W K KE+K N N+ + VE + T + N S
Sbjct: 19 YIGSIIGAVLIVCGLYAVIWVKSKEMKMNTVLVSSNES-DRVEIVLRSTGSEENSNSNGI 195
Query: 333 KSVDDGNDIKCGD 345
+ + D D D
Sbjct: 196 QVIRDDEDSSAED 234
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.325 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,837,990
Number of Sequences: 28460
Number of extensions: 82103
Number of successful extensions: 653
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of query: 346
length of database: 4,897,600
effective HSP length: 91
effective length of query: 255
effective length of database: 2,307,740
effective search space: 588473700
effective search space used: 588473700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0253.14