BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0249.5
(848 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AI967524 244 3e-65
BP043024 159 2e-39
BP028259 156 1e-38
TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%) 153 1e-37
AV407690 148 3e-36
BF177767 137 9e-33
BP051839 123 8e-31
AV422410 120 1e-27
TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 117 8e-27
TC10999 similar to UP|Q8RZN6 (Q8RZN6) Ankyrin-like protein, part... 114 5e-26
TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 112 3e-25
BI419208 110 7e-25
TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partia... 100 1e-21
TC18162 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (5%) 97 1e-20
TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin l... 93 2e-19
BP042300 80 1e-15
AV766252 75 6e-14
TC19404 similar to GB|AAM70566.1|21700885|AY124857 At2g39750/T5I... 57 3e-13
AV428170 70 2e-12
TC12439 similar to UP|Q9FMJ2 (Q9FMJ2) Ankyrin-like protein, part... 69 2e-12
>AI967524
Length = 460
Score = 244 bits (624), Expect = 3e-65
Identities = 110/147 (74%), Positives = 123/147 (82%)
Frame = +2
Query: 328 LCNVTAGADYIPCLDNEMAIKKLRSTKHFEHRERHCPEEAPTCLVPTPKGYKRSIEWPSS 387
LCNVTAG D+IPCLDN AIK L TKH+EHRER CPEE PTCLV P+GYKR IEWP S
Sbjct: 20 LCNVTAGPDFIPCLDNLKAIKHLPITKHYEHRERQCPEEPPTCLVSLPEGYKRPIEWPKS 199
Query: 388 RDKIWYHNVPHSMLAEVKGHQNWVKVTGEFLTFPGGGTQFIHGALHYIDFLQKAEAGIAW 447
R+KIWY NVPH+ LAE KGHQNWVK TGE+LTFPGGGTQF HGALHYID + ++ I+W
Sbjct: 200 REKIWYSNVPHTKLAEFKGHQNWVKATGEYLTFPGGGTQFKHGALHYIDTIAQSVPDISW 379
Query: 448 GKHTRVILDVGCGVGSFGGYLFERDVV 474
G+ TRVILDVGCGV SFGG+LFERDV+
Sbjct: 380 GQQTRVILDVGCGVASFGGFLFERDVL 460
>BP043024
Length = 447
Score = 159 bits (402), Expect = 2e-39
Identities = 76/140 (54%), Positives = 98/140 (69%)
Frame = -1
Query: 420 FPGGGTQFIHGALHYIDFLQKAEAGIAWGKHTRVILDVGCGVGSFGGYLFERDVVAMSFA 479
FPGGGTQF GA YID Q A R LD GCGV S+G YL+ R+VVAMSFA
Sbjct: 441 FPGGGTQFPQGADKYID--QLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFA 268
Query: 480 PKDEHEAQVQFALERGIPAISAVMGSTRLPFPSRVFDLIHCARCRVPWHVDGGMLLLELN 539
P+D HEAQVQFALERG+PA+ V+G+ +LP+PS FD+ HC+RC +PW + G+ ++E++
Sbjct: 267 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVD 88
Query: 540 RLLRPGGYFVWCATPVYQKL 559
R+LRPGGY+V P +L
Sbjct: 87 RVLRPGGYWVLSGPPSIGRL 28
>BP028259
Length = 502
Score = 156 bits (394), Expect = 1e-38
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 773 LFSKLKERCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGM 832
LFSKLKERCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGM
Sbjct: 500 LFSKLKERCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGM 321
Query: 833 LCAKRGTWRPDSAALS 848
LCAKRGTWRPDSAALS
Sbjct: 320 LCAKRGTWRPDSAALS 273
>TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%)
Length = 709
Score = 153 bits (387), Expect = 1e-37
Identities = 69/103 (66%), Positives = 86/103 (82%), Gaps = 2/103 (1%)
Frame = +3
Query: 742 IYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRPGGTLI 801
IYERGLF IYHDWCESFSTYPR+YDLLHAD+LFSKLKERC ++ V+AEVDR++RP G LI
Sbjct: 3 IYERGLFXIYHDWCESFSTYPRSYDLLHADSLFSKLKERCNIVAVIAEVDRMLRPQGYLI 182
Query: 802 VRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKRGTWRP 842
+RD TI E+E++ KSLHW+I TY+K +G+LC ++ WRP
Sbjct: 183 IRDNVETIGEIESMTKSLHWDIQFTYSKLGDGLLCIQKTLWRP 311
Score = 32.7 bits (73), Expect = 0.25
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 513 RVFDLIHC--------ARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLEEDVE 564
R +DL+H RC + ++ E++R+LRP GY + + ++VE
Sbjct: 66 RSYDLLHADSLFSKLKERCNIV------AVIAEVDRMLRPQGYLI---------IRDNVE 200
Query: 565 IWKEMSSLTKKMCWEL 580
E+ S+TK + W++
Sbjct: 201 TIGEIESMTKSLHWDI 248
>AV407690
Length = 427
Score = 148 bits (374), Expect = 3e-36
Identities = 67/134 (50%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
Frame = +3
Query: 455 LDVGCGVGSFGGYLFERDVVAMSFAPKDEHEAQVQFALERGIPAISAVMGSTRLPFPSRV 514
LD GCGV S+G YL +R+V+AMSFAPKD HEAQVQFALERG+PA+ V+G+ LP+PSR
Sbjct: 6 LDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSRA 185
Query: 515 FDLIHCARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPV--------YQKLEEDVEI- 565
FD+ C+RC +PW + G L+E++R+LRPGGY++ P+ +Q+ +EDV+
Sbjct: 186 FDMAQCSRCLIPWAANEGKYLMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKAE 365
Query: 566 WKEMSSLTKKMCWE 579
+ + L + +CWE
Sbjct: 366 QRNIEELAESLCWE 407
Score = 29.3 bits (64), Expect = 2.7
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 18/59 (30%)
Frame = +3
Query: 787 MAEVDRIIRPGGTLIVRDEPNTIK------------------EVEALLKSLHWEITYTK 827
+ EVDR++RPGG I+ P K +E L +SL WE Y K
Sbjct: 246 LMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKAEQRNIEELAESLCWEKKYEK 422
>BF177767
Length = 494
Score = 137 bits (344), Expect = 9e-33
Identities = 68/140 (48%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Frame = +3
Query: 677 QDFTADTERWRNIVDELSNIG--ITWSNVRNIMDMRAVYGGFAAALRELPVWVFNVV-NI 733
+ + D +WR V+ I + RNIMDM A G FAAA+ +WV NVV I
Sbjct: 27 ETYQDDNTKWRKHVNAYKKINRLLDTGRYRNIMDMNAGLGSFAAAIESSKLWVMNVVPTI 206
Query: 734 DAPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRI 793
+TL +IYERGL GIYHDWCE FSTYPRTYDL+HA LFS K +C + ++ E+DRI
Sbjct: 207 AEKNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHAHGLFSLYKSKCNIEDILLEMDRI 386
Query: 794 IRPGGTLIVRDEPNTIKEVE 813
+RP G +I RDE + + +V+
Sbjct: 387 LRPEGAVIFRDEVDVLIKVK 446
Score = 37.4 bits (85), Expect = 0.010
Identities = 36/135 (26%), Positives = 57/135 (41%), Gaps = 8/135 (5%)
Frame = +3
Query: 452 RVILDVGCGVGSFGGYLFERDVVAMSFAPKDEHEAQVQFALERGIPAISAVMGSTRLPFP 511
R I+D+ G+GSF + + M+ P + + ERG+ I +P
Sbjct: 114 RNIMDMNAGLGSFAAAIESSKLWVMNVVPTIAEKNTLGVIYERGLIGIYHDWCEGFSTYP 293
Query: 512 SRVFDLIHC--------ARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLEEDV 563
R +DLIH ++C + +LLE++R+LRP G ++ + E DV
Sbjct: 294 -RTYDLIHAHGLFSLYKSKCNIE------DILLEMDRILRPEGAVIF-------RDEVDV 431
Query: 564 EIWKEMSSLTKKMCW 578
I KK CW
Sbjct: 432 LI------KVKKTCW 458
>BP051839
Length = 551
Score = 123 bits (308), Expect(2) = 8e-31
Identities = 68/159 (42%), Positives = 96/159 (59%), Gaps = 5/159 (3%)
Frame = +1
Query: 622 SNAAWYVPLQACMHRVPENQAERGAKWPEVWPRRVKKAPYWLNS-SEVGIYGKPAPQDFT 680
+++ YV L+AC+ ++P + WP R+ + P L S + I + + F
Sbjct: 85 ASSIMYVGLKACITQLPSDGYGVNVT---TWPSRLHQPPDRLQSIKQDAIISRV--ELFR 249
Query: 681 ADTERWRNIVDELSNIGITWS--NVRNIMDMRAVYGGFAAALRELPV--WVFNVVNIDAP 736
A+++ W I+D W N+RN+MDMRA +GGFAAAL +L + WV NVV +
Sbjct: 250 AESKYWNEIIDSYVR-AYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGF 426
Query: 737 DTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFS 775
+TLP++Y+RGL G+ HDWCE F TYPRTYDLLHA LFS
Sbjct: 427 NTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFS 543
Score = 28.5 bits (62), Expect(2) = 8e-31
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 594 AIYRKPTSNECYDNRE-KNQPPMC 616
AI+RKP +N CY +R+ PP+C
Sbjct: 29 AIWRKPLNNSCYLSRDIPVHPPLC 100
>AV422410
Length = 440
Score = 120 bits (300), Expect = 1e-27
Identities = 66/156 (42%), Positives = 86/156 (54%), Gaps = 7/156 (4%)
Frame = +2
Query: 627 YVPLQACMHRVPENQAERGA----KWPEVWPRRVKKAPYWLNSSEVGIYGKPAPQDFTAD 682
Y L+ C+ R + E KWPE ++ N ++V + AD
Sbjct: 2 YFKLKKCVSRTSSVKGEYSIGVIPKWPERLTAPQPRSTLLKNGADV----------YQAD 151
Query: 683 TERWRNIVDELS---NIGITWSNVRNIMDMRAVYGGFAAALRELPVWVFNVVNIDAPDTL 739
T RW V N+ + S+VRN+MDM A +GGFAAAL PVWV NVV P TL
Sbjct: 152 TRRWLRRVAYYKHSLNMKLGTSSVRNVMDMNAFFGGFAAALISDPVWVMNVVPARKPSTL 331
Query: 740 PIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFS 775
+I++RGL G+YHDWCE FSTYPRTYDL+H ++ S
Sbjct: 332 DVIFDRGLIGVYHDWCEPFSTYPRTYDLIHVSSIES 439
>TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 664
Score = 117 bits (293), Expect = 8e-27
Identities = 50/100 (50%), Positives = 72/100 (72%)
Frame = +1
Query: 738 TLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRPG 797
TL IYERGL GIYHDWCE+ STYPRTYDL+HAD+LFS +RCKL ++ E+DRI+RP
Sbjct: 10 TLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRPE 189
Query: 798 GTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGMLCAKR 837
G +I+RD+ + + +V+++ L W+ ++G L ++
Sbjct: 190 GAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREK 309
Score = 31.6 bits (70), Expect = 0.55
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 493 ERGIPAISAVMGSTRLPFPSRVFDLIHCA--------RCRVPWHVDGGMLLLELNRLLRP 544
ERG+ I +P R +DLIH RC++ +LLE++R+LRP
Sbjct: 28 ERGLIGIYHDWCEAMSTYP-RTYDLIHADSLFSLYNDRCKLE------DILLEMDRILRP 186
Query: 545 GGYFVWCATPVYQKLEEDVEIWKEMSSLTKKMCWELVTINKDE 587
G + + +DV++ ++ S+ + W+ V ++ ++
Sbjct: 187 EGAVI---------IRDDVDMLVKVKSIANGLEWDSVIVDHED 288
>TC10999 similar to UP|Q8RZN6 (Q8RZN6) Ankyrin-like protein, partial (11%)
Length = 639
Score = 114 bits (286), Expect = 5e-26
Identities = 53/87 (60%), Positives = 68/87 (77%), Gaps = 2/87 (2%)
Frame = +1
Query: 758 FSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLK 817
FSTYPR+YDLLHAD+LFSKLK+RCK V+AEVDR++RP G LIVRD I E+++L+K
Sbjct: 1 FSTYPRSYDLLHADHLFSKLKKRCKFEAVVAEVDRMLRPEGKLIVRDSVEIINELQSLVK 180
Query: 818 SLHWEI--TYTKEQEGMLCAKRGTWRP 842
S+ WE+ TY+KE G LC ++ WRP
Sbjct: 181 SMQWEVRMTYSKENVGFLCVQKSMWRP 261
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 513 RVFDLIHC--------ARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLEEDVE 564
R +DL+H RC+ ++ E++R+LRP G + + + VE
Sbjct: 16 RSYDLLHADHLFSKLKKRCKFE------AVVAEVDRMLRPEGKLI---------VRDSVE 150
Query: 565 IWKEMSSLTKKMCWEL-VTINKDEL 588
I E+ SL K M WE+ +T +K+ +
Sbjct: 151 IINELQSLVKSMQWEVRMTYSKENV 225
>TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 749
Score = 112 bits (279), Expect = 3e-25
Identities = 46/97 (47%), Positives = 70/97 (71%)
Frame = +3
Query: 735 APDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRII 794
A +TL +++ERGL GIYHDWCE FSTYPRTYDL+HA++LFS + C L ++ E+DRI+
Sbjct: 6 AQNTLGVVFERGLIGIYHDWCEGFSTYPRTYDLIHANDLFSLYQGTCNLEDILLEMDRIL 185
Query: 795 RPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEG 831
RP G +I+RDE + + +V+ ++ + W+ ++G
Sbjct: 186 RPEGVVIIRDEVDVLIKVKKIIGGMRWDTKMVDHEDG 296
>BI419208
Length = 361
Score = 110 bits (276), Expect = 7e-25
Identities = 52/125 (41%), Positives = 74/125 (58%)
Frame = +3
Query: 463 SFGGYLFERDVVAMSFAPKDEHEAQVQFALERGIPAISAVMGSTRLPFPSRVFDLIHCAR 522
SF L +++V+ +S KD+ Q ALERG P++ + G RLPFPS VFD +HC
Sbjct: 3 SFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSYVFDAVHCGG 182
Query: 523 CRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLEEDVEIWKEMSSLTKKMCWELVT 582
C +PWH +GG LLLE+NR+LRPGGYF+ + E + M+ LT +CW ++
Sbjct: 183 CSIPWHSNGGKLLLEMNRILRPGGYFIMSTK------HDSFEQEEAMTMLTASICWNILA 344
Query: 583 INKDE 587
D+
Sbjct: 345 HKSDD 359
>TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partial (79%)
Length = 584
Score = 100 bits (248), Expect = 1e-21
Identities = 39/95 (41%), Positives = 66/95 (69%)
Frame = +3
Query: 737 DTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRP 796
+TL +IYERGL G Y +WCE+ STYPRTYD +H D++F+ + RC + ++ E+DRI+RP
Sbjct: 9 NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRILRP 188
Query: 797 GGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEG 831
G++I+RD+ + + +V+ ++ W+ ++G
Sbjct: 189 QGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKG 293
>TC18162 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (5%)
Length = 559
Score = 96.7 bits (239), Expect = 1e-20
Identities = 42/85 (49%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Frame = +1
Query: 761 YPRTYDLLHADNLFSKLKERCKL-IPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSL 819
YPR+YDLLH D+LFS+LK RCK + ++ E+DRI+RPGG I+RD+ + +E +L+S+
Sbjct: 1 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 180
Query: 820 HWEI--TYTKEQEGMLCAKRGTWRP 842
WEI ++ +++EG+LCA++ WRP
Sbjct: 181 QWEIRMSFNQDKEGILCAQKTLWRP 255
Score = 34.7 bits (78), Expect = 0.065
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +1
Query: 513 RVFDLIHCA--------RCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLEEDVE 564
R +DL+H RC+ P + ++E++R+LRPGG+ + + + VE
Sbjct: 7 RSYDLLHVDHLFSRLKNRCKQPVSI-----VVEMDRILRPGGWTI---------IRDKVE 144
Query: 565 IWKEMSSLTKKMCWEL-VTINKDE 587
I + + + M WE+ ++ N+D+
Sbjct: 145 ILNALEEILRSMQWEIRMSFNQDK 216
>TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin like
protein), partial (14%)
Length = 419
Score = 93.2 bits (230), Expect = 2e-19
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +2
Query: 611 NQPPMCKDDDDSNAAWYVPLQACMHRVPENQAERGAKWPEVWPRRVKKAPYWLNSSEVGI 670
++PP+C+ D+D +A W V ++AC+ ++ WP R+ P L ++ G
Sbjct: 2 SRPPLCQSDEDPDAVWGVNMEACITPYSDHVNRAKGSGLAPWPARLTSPPPRL--ADFGY 175
Query: 671 YGKPAPQDFTADTERWRNIVDELSNI---GITWSNVRNIMDMRAVYGGFAAALRELPVWV 727
+ + F DTE W+ V++ N+ I+ + +RNIMDM+A G FAAALR+ VWV
Sbjct: 176 ----SNEMFEKDTELWQRRVEKYWNLLSPKISSNTLRNIMDMKASMGSFAAALRDKDVWV 343
Query: 728 FNVVNIDAPDTLPIIYERGLFGIYH 752
NVV D +TL ++Y+RGL G H
Sbjct: 344 MNVVPQDGLNTLKLVYDRGLIGSTH 418
>BP042300
Length = 119
Score = 80.5 bits (197), Expect = 1e-15
Identities = 35/39 (89%), Positives = 36/39 (91%)
Frame = -3
Query: 521 ARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKL 559
ARCRVPWH DGG+LLLELNRLLRPGGYFVW ATPVYQ L
Sbjct: 117 ARCRVPWHEDGGLLLLELNRLLRPGGYFVWSATPVYQTL 1
>AV766252
Length = 585
Score = 74.7 bits (182), Expect = 6e-14
Identities = 29/77 (37%), Positives = 54/77 (69%)
Frame = -1
Query: 757 SFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALL 816
+ STYPRTYDL+H D++FS +RC+L ++ E+DR++RP G++I+R + + + +V++++
Sbjct: 585 AMSTYPRTYDLIHGDSIFSLYNDRCELEDILLEMDRVLRPEGSVIIRGDVDILIKVKSIV 406
Query: 817 KSLHWEITYTKEQEGML 833
+ WE ++G L
Sbjct: 405 NGMDWESQIVDHEDGPL 355
Score = 28.1 bits (61), Expect = 6.1
Identities = 15/54 (27%), Positives = 29/54 (52%)
Frame = -1
Query: 534 LLLELNRLLRPGGYFVWCATPVYQKLEEDVEIWKEMSSLTKKMCWELVTINKDE 587
+LLE++R+LRP G + + DV+I ++ S+ M WE ++ ++
Sbjct: 498 ILLEMDRVLRPEGSVI---------IRGDVDILIKVKSIVNGMDWESQIVDHED 364
>TC19404 similar to GB|AAM70566.1|21700885|AY124857 At2g39750/T5I7.5
{Arabidopsis thaliana;}, partial (12%)
Length = 520
Score = 57.0 bits (136), Expect(2) = 3e-13
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +2
Query: 753 DWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEV 790
DWCE F TYPRTYDLLHA NL S K+RC + +M E+
Sbjct: 2 DWCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEM 115
Score = 35.4 bits (80), Expect(2) = 3e-13
Identities = 15/41 (36%), Positives = 23/41 (55%)
Frame = +3
Query: 791 DRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEG 831
DRI+RPGG +RD + E+ + K++ W+ T EG
Sbjct: 117 DRILRPGGRAYIRDSLAIMDELVEIAKAIGWQATVRDTSEG 239
>AV428170
Length = 405
Score = 69.7 bits (169), Expect = 2e-12
Identities = 45/142 (31%), Positives = 70/142 (48%), Gaps = 6/142 (4%)
Frame = +3
Query: 594 AIYRKPTSN-ECYDNREKNQPPMCKDDDDSNAAWYVPLQACMHRVPE--NQAERGAKWPE 650
AI++K ++ +C NR P+C+ +++ + AWY +Q C+ +PE ++ E E
Sbjct: 3 AIWQKAQNHLDCKANR-----PICQAENNPDKAWYTDMQTCLSPLPEVSSKEETAGGALE 167
Query: 651 VWPRRVKKAPYWLNSSEVGIYGKPAPQDFTADTERWRNIVDELSNIGITWSN---VRNIM 707
WP RVK P + +G+ + F+ D E W+ V + RN +
Sbjct: 168 NWPDRVKATPPRIF---MGVIKGVTSETFSEDNELWKKRVSYYKKVNNQLGKPGRYRNFL 338
Query: 708 DMRAVYGGFAAALRELPVWVFN 729
DM A GGFAAA + PVWV N
Sbjct: 339 DMNANLGGFAAAFIKYPVWVMN 404
>TC12439 similar to UP|Q9FMJ2 (Q9FMJ2) Ankyrin-like protein, partial (5%)
Length = 534
Score = 69.3 bits (168), Expect = 2e-12
Identities = 45/142 (31%), Positives = 70/142 (48%), Gaps = 4/142 (2%)
Frame = +3
Query: 8 NNRRSSSPSYVSTLTILLFIALCVFGVWMLSSSSLVSPQTQSDESTTTRTAIDTSSTTDT 67
NN+RS+S SY ST+TI++F+ALC+ G+WML+SSS+V Q +T + S
Sbjct: 144 NNKRSAS-SYCSTVTIVVFVALCLVGLWMLTSSSVVPVQNVDVSQDSTTNDVKEQSEVKQ 320
Query: 68 DFSSSQDNPETTTIKTDDSAETTTKSEEQKNDEVFRDNPGNLPDDAIKSD----DKNSNN 123
S + E T TD F D+ G+LP+DA K D +N+++
Sbjct: 321 QSESESEVKEQPTDTTDSKPRR------------FEDDAGDLPEDATKGDTSVTSENNSD 464
Query: 124 EQHKQQSAISDAQISEESTLTQ 145
KQ+ + + + S T+
Sbjct: 465 LPEKQEDKLDEKPAEQFSDDTK 530
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,823,632
Number of Sequences: 28460
Number of extensions: 222631
Number of successful extensions: 1233
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of query: 848
length of database: 4,897,600
effective HSP length: 98
effective length of query: 750
effective length of database: 2,108,520
effective search space: 1581390000
effective search space used: 1581390000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0249.5