BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0248.6
(573 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14955 UP|O22305 (O22305) Peptide transporter, complete 539 e-154
TC14389 weakly similar to UP|Q9FNL8 (Q9FNL8) Peptide transporter... 466 e-132
AV409553 188 2e-48
CB826936 149 9e-37
CN824992 144 3e-35
TC14390 weakly similar to UP|Q9FNL8 (Q9FNL8) Peptide transporter... 132 1e-31
TC16709 weakly similar to PIR|T47573|T47573 peptide transport-li... 131 3e-31
TC13000 similar to PIR|T47573|T47573 peptide transport-like prot... 119 1e-27
AW720047 119 2e-27
TC18768 112 2e-26
BU494138 103 6e-23
TC12979 similar to UP|Q9LQL2 (Q9LQL2) F5D14.23 protein, partial ... 93 1e-19
TC13937 weakly similar to UP|Q9LVE0 (Q9LVE0) Nitrate transporter... 93 1e-19
CB828533 91 7e-19
BI420182 87 1e-17
BP076619 86 2e-17
BP043790 84 5e-17
TC18700 similar to UP|Q9LYR6 (Q9LYR6) Peptide transporter-like p... 81 5e-16
BP071089 78 4e-15
TC19180 similar to PIR|T10255|T10255 nitrite transport protein, ... 77 6e-15
>TC14955 UP|O22305 (O22305) Peptide transporter, complete
Length = 2300
Score = 539 bits (1389), Expect = e-154
Identities = 259/366 (70%), Positives = 309/366 (83%)
Frame = +1
Query: 204 EEKFGWALGYAISAIGFLVAFIAFFLGTPMYRHKSRKARSSAKGFIRVPVVAFRNRKLQV 263
+ K L Y++SAIGFL++ I FF G+P+YRHKSR+ARS + FIRVP+VAFRNRKLQ+
Sbjct: 646 KRKMDXGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRVPLVAFRNRKLQL 825
Query: 264 PSNPSELHEFEMEHYVSSGRRKLHHTPCFRFLDKAAITESNTDNSNPPCTVTQVEKAKVV 323
P NPSELHEF++ +Y+SSG RK+HHT F FLD+AAI ESNTD SNPPCTVTQVE K+V
Sbjct: 826 PCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQVEGTKLV 1005
Query: 324 IGMFHIWLLMLIPSNFWAVEVTIFVKQGTTMDRSLGPHFHFPAASLWSFAVFTMVISLPI 383
+GMF IWLLMLIP+N WA+E TIFV+QGTTMDR+LGP F PAASLW F V T +I LPI
Sbjct: 1006 LGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLTTLICLPI 1185
Query: 384 YDNFFIPFMRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVEIQRMHVIRKHNIVGPKE 443
YD++FIPFMRR TGNHRG+KLLQRVGIG+AIQ+I +AVTYAVE QRM VI+KH+IVGP+E
Sbjct: 1186 YDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQRMSVIKKHHIVGPEE 1365
Query: 444 VVPMSIFWLLPQNVIFGVANTFLASGLLEFFYDQSPEEMKVLGTTFYTSTMAGGNYFNSF 503
VPMSIFWLLPQN+I GV+N FLA+G+LEFFYDQSPEEMK LGTT TS +A G+Y N+F
Sbjct: 1366 TVPMSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTF 1545
Query: 504 LVTVVDKVTRKMCDHSWIGDNLNESHLDHYYAFLFVIAIFNFGVFLWVSNGYIYKKECTS 563
LVT++DK+ +WIG+NLN+SHLD+YYAFLFVI+ NFGVFLWVS+GYIYKKE TS
Sbjct: 1546 LVTMIDKL-------NWIGNNLNDSHLDYYYAFLFVISALNFGVFLWVSSGYIYKKENTS 1704
Query: 564 TTEPND 569
TTE +D
Sbjct: 1705 TTEVHD 1722
Score = 333 bits (853), Expect = 6e-92
Identities = 160/232 (68%), Positives = 188/232 (80%)
Frame = +3
Query: 1 MEAQAHTLDGTVDLGGRPVISSVTGKWKACTFILVYQVFERFAYYGIGADLVNYMTVHLH 60
ME + +TLDGTVDL GRPV+SS+TGK KACT+ILVY+V ERFAYYG+GA+LVN+MT L+
Sbjct: 36 MEGKGYTLDGTVDLAGRPVLSSLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLN 215
Query: 61 KNVVTSITSVSNWSGLSWITPILGAYIADSYLGRFWTITLSLLIYAMGLGLLVLTSSLKG 120
K+VV+SITS +NWSGL+ +TPILGAYIAD+Y GRFWTIT SLLIYA+GL LLVLT++LK
Sbjct: 216 KDVVSSITSFNNWSGLATLTPILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKS 395
Query: 121 LGPTCENGVCKEASNFQLAFFYLSIYTIAIGSGAVKPNMSTFGADQFDDFKPGEKEHKVS 180
L P CENG+C+EASN Q+A FY S+YTIA+GSGAVKPNMSTFGADQFDDF+ EKE KVS
Sbjct: 396 LRPACENGICREASNLQVALFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVS 575
Query: 181 FFNWWVFTTACGTLASTLFVVYIEEKFGWALGYAISAIGFLVAFIAFFLGTP 232
FFNWW F ACG+L +TLFVVYI+EK G G F FLG P
Sbjct: 576 FFNWWAFNGACGSLMATLFVVYIQEKNGXGFGLQFICYWFSTFLYYLFLGFP 731
>TC14389 weakly similar to UP|Q9FNL8 (Q9FNL8) Peptide transporter, partial
(72%)
Length = 1990
Score = 466 bits (1198), Expect = e-132
Identities = 229/532 (43%), Positives = 338/532 (63%), Gaps = 5/532 (0%)
Frame = +3
Query: 36 YQVFERFAYYGIGADLVNYMTVHLHKNVVTSITSVSNWSGLSWITPILGAYIADSYLGRF 95
Y++FER AYYGI ++LV ++ LH+ V S +VSNW+G+ W TP++GAYIAD+YLGR+
Sbjct: 27 YELFERMAYYGISSNLVVFLGSKLHEGTVASSNNVSNWAGVVWTTPLVGAYIADAYLGRY 206
Query: 96 WTITLSLLIYAMGLGLLVLTSSLKGLGPT-CENGV----CKEASNFQLAFFYLSIYTIAI 150
WT ++ IY +G+ LL LT SL L P C GV C +AS + FYL++Y IA+
Sbjct: 207 WTFIIASCIYLLGMCLLTLTVSLPALRPPPCAQGVENQDCPQASPWTRGIFYLALYIIAL 386
Query: 151 GSGAVKPNMSTFGADQFDDFKPGEKEHKVSFFNWWVFTTACGTLASTLFVVYIEEKFGWA 210
G+G KPN+ST GADQFD+++P E +K+SFFNWWVF+ G L ST +VYI++ W+
Sbjct: 387 GAGGTKPNISTMGADQFDEYEPKENTYKLSFFNWWVFSILVGVLFSTTVLVYIQDNLSWS 566
Query: 211 LGYAISAIGFLVAFIAFFLGTPMYRHKSRKARSSAKGFIRVPVVAFRNRKLQVPSNPSEL 270
LGY + +G + + F +GTP YRHK S ++V V A K VP +P +L
Sbjct: 567 LGYGLPTVGLAFSILVFLVGTPFYRHKLPSG-SPLTRMLQVFVAAGIKWKAHVPHDPKQL 743
Query: 271 HEFEMEHYVSSGRRKLHHTPCFRFLDKAAITESNTDNSNPPCTVTQVEKAKVVIGMFHIW 330
HE ME Y ++ R ++ HT RFLDKAA+ T CTVTQVE+ K + M I
Sbjct: 744 HELSMEEYANNSRNRIDHTSTLRFLDKAAVKTGKTSPWRL-CTVTQVEETKQMTKMVPIL 920
Query: 331 LLMLIPSNFWAVEVTIFVKQGTTMDRSLGPHFHFPAASLWSFAVFTMVISLPIYDNFFIP 390
+ LIP T+F+KQGTT+DRS+GP+F P A L + + +M+ S+PIYD F+P
Sbjct: 921 ITTLIPCTMLIQAHTLFIKQGTTLDRSMGPNFEIPPAGLSAILIISMLTSIPIYDRVFVP 1100
Query: 391 FMRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVEIQRMHVIRKHNIVGPKEVVPMSIF 450
+RR+T N RG+ +LQR+G G+ + ++ + + + E +R+ V R+ +++G +++P+SIF
Sbjct: 1101VIRRYTKNPRGITMLQRLGAGLLMYVLIMVIAWLTERKRLRVAREKHLLGQHDIIPLSIF 1280
Query: 451 WLLPQNVIFGVANTFLASGLLEFFYDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVTVVDK 510
L+PQ + GVA F ++FFY Q+PE MK LG ++ T+++A G + +SFL++ V
Sbjct: 1281ILIPQYALTGVAENFAEIAKMDFFYYQAPEGMKSLGISYSTTSVALGCFLSSFLLSTVAD 1460
Query: 511 VTRKMCDHSWIGDNLNESHLDHYYAFLFVIAIFNFGVFLWVSNGYIYKKECT 562
+T+K WI DNLN S LD+YYAF+ +++ NF FL + + Y + T
Sbjct: 1461ITKKHSHQGWILDNLNISRLDYYYAFMVILSFLNFLCFLVTAKFFDYNVDVT 1616
>AV409553
Length = 433
Score = 188 bits (477), Expect = 2e-48
Identities = 84/144 (58%), Positives = 106/144 (73%)
Frame = +2
Query: 97 TITLSLLIYAMGLGLLVLTSSLKGLGPTCENGVCKEASNFQLAFFYLSIYTIAIGSGAVK 156
T TLS ++Y MG+ LL + SLK L PTC NG+C +AS Q+ FFY ++YT AIG+G K
Sbjct: 2 TFTLSSIVYVMGMILLTVAVSLKSLKPTCTNGICNKASTSQIVFFYTALYTTAIGAGGTK 181
Query: 157 PNMSTFGADQFDDFKPGEKEHKVSFFNWWVFTTACGTLASTLFVVYIEEKFGWALGYAIS 216
PN+STFGADQFDDF P EK+ K SFFNWW+FT+ G L +TL +VYI+E GW LGY I
Sbjct: 182 PNISTFGADQFDDFNPHEKQTKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIP 361
Query: 217 AIGFLVAFIAFFLGTPMYRHKSRK 240
G L++ + F++GTPMYRHK RK
Sbjct: 362 TSGLLLSLVIFYVGTPMYRHKVRK 433
>CB826936
Length = 596
Score = 149 bits (377), Expect = 9e-37
Identities = 71/166 (42%), Positives = 114/166 (67%)
Frame = +3
Query: 392 MRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVEIQRMHVIRKHNIVGPKEVVPMSIFW 451
MR++T N RG+ +LQR+G G+ + II + + E +R+ V R++N++G + +P++IF
Sbjct: 6 MRQYTKNPRGIAMLQRLGAGLVMYIITMVTAWLSERKRLSVAREYNLLGQHDKIPLTIFI 185
Query: 452 LLPQNVIFGVANTFLASGLLEFFYDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVTVVDKV 511
LLPQ + GVAN F+ +L+FFYDQ+PE MK LG ++ T++ A G +F+SFL++ V +
Sbjct: 186 LLPQFALTGVANNFVDIAMLDFFYDQAPEGMKSLGISYSTTSTALGCFFSSFLLSTVADL 365
Query: 512 TRKMCDHSWIGDNLNESHLDHYYAFLFVIAIFNFGVFLWVSNGYIY 557
T+K W+ DNLN SHLD+YYAF+ ++++ NF FL + + Y
Sbjct: 366 TKKHGHKGWVLDNLNVSHLDYYYAFMAILSVANFLCFLVAAKLFAY 503
>CN824992
Length = 708
Score = 144 bits (364), Expect = 3e-35
Identities = 91/235 (38%), Positives = 130/235 (54%), Gaps = 13/235 (5%)
Frame = +2
Query: 103 LIYAMGLGLLVLTSSLKGLGPTCENGV------CKEASNFQLAFFYLSIYTIAIGSGAVK 156
+I+ +GL L LT+ L L P NG C S++Q A FY+SIY IA+G+G +
Sbjct: 14 VIFVVGLASLSLTTYLFLLEP---NGCGDKELPCTSHSSYQTALFYVSIYLIALGNGGYQ 184
Query: 157 PNMSTFGADQFDDFKPGEKEHKVSFFNWWVFTTACGTLASTLFVVYIEEKFGWALGYAIS 216
PN++TFGADQFD+ P E+ K+SFF+++ G+L S + Y E+ W LG+ S
Sbjct: 185 PNIATFGADQFDEEDPKEQHSKISFFSYFYLALNLGSLFSNTILNYFEDDGLWTLGFWAS 364
Query: 217 AIGFLVAFIAFFLGTPMYRHKSRKARSSAKGFIRVPVVAFRNRKLQV-PSNPSELHEFEM 275
A +A + F GTP YR+ + + F +V V A R K++V P +LH E+
Sbjct: 365 AGSAFLALVLFLCGTPWYRY-FKPGGNPVPRFCQVFVAAMRKWKVKVSPGEEDQLH--EV 535
Query: 276 EHYVSSGRRKLHHTPCFRFLDKAAITESNTDNSNPPC------TVTQVEKAKVVI 324
E ++G RK+ HT FRFLDKAA+ S C TVTQVE+ K ++
Sbjct: 536 EECSTNGGRKMFHTEGFRFLDKAALITSQESKQENECSLWHLSTVTQVEEVKCIL 700
>TC14390 weakly similar to UP|Q9FNL8 (Q9FNL8) Peptide transporter, partial
(18%)
Length = 622
Score = 132 bits (333), Expect = 1e-31
Identities = 58/102 (56%), Positives = 78/102 (75%)
Frame = +1
Query: 6 HTLDGTVDLGGRPVISSVTGKWKACTFILVYQVFERFAYYGIGADLVNYMTVHLHKNVVT 65
+T DGTVDL GRPV+ S TG WKACTFI+ Y++FER AYYGI ++LV ++ LH+ V
Sbjct: 82 YTQDGTVDLKGRPVLRSKTGSWKACTFIVGYELFERMAYYGISSNLVVFLGSKLHEGTVA 261
Query: 66 SITSVSNWSGLSWITPILGAYIADSYLGRFWTITLSLLIYAM 107
S +VSNW+G+ W TP++GAYIAD+YLGR+WT ++ IY +
Sbjct: 262 SSNNVSNWAGVVWTTPLVGAYIADAYLGRYWTFIIASCIYLL 387
>TC16709 weakly similar to PIR|T47573|T47573 peptide transport-like protein
- Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(41%)
Length = 712
Score = 131 bits (330), Expect = 3e-31
Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 6/238 (2%)
Frame = +1
Query: 217 AIGFLVAFIAFFLGTPMYRHKSRKARSSAKGFIRVPVVAFRNRKLQVPSNPSELHEFEME 276
A+ VA ++FF GT +YR++ + S +V V + R +Q P + S L+E
Sbjct: 4 AVAMAVAVVSFFSGTRLYRNQ-KPGGSPLTRMCQVVVASMRKCGVQAPDDKSLLYEIADT 180
Query: 277 HYVSSGRRKLHHTPCFRFLDKAAITESNTDNSNPP-----CTVTQVEKAKVVIGMFHIWL 331
G RKL HT F DKAA+ ++D + CT TQVE+ K ++ M +W
Sbjct: 181 ESAIKGSRKLDHTNELSFFDKAAVVVQSSDQKDSVDPWRLCTETQVEELKSILRMLPVWA 360
Query: 332 LMLIPSNFWAVEVTIFVKQGTTMDRSLG-PHFHFPAASLWSFAVFTMVISLPIYDNFFIP 390
+I + + T+FV QG TM+ +G +F P A+L F +++ +P+YD +P
Sbjct: 361 TGIIFATVYGQMSTLFVLQGQTMNTHVGNSNFKIPPAALSIFDTLSVIFWVPVYDWIIVP 540
Query: 391 FMRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVEIQRMHVIRKHNIVGPKEVVPMS 448
R+ +G+ G+ LQR+GIG+ I I + +E+ R+ ++R+HN KE VPMS
Sbjct: 541 IARKFSGHKNGLTQLQRMGIGLFISIFAMVAAAILEVIRLRMVRRHNYYELKE-VPMS 711
>TC13000 similar to PIR|T47573|T47573 peptide transport-like protein -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(21%)
Length = 446
Score = 119 bits (298), Expect = 1e-27
Identities = 57/116 (49%), Positives = 77/116 (66%)
Frame = +3
Query: 2 EAQAHTLDGTVDLGGRPVISSVTGKWKACTFILVYQVFERFAYYGIGADLVNYMTVHLHK 61
E +T DGTVD G P TG WKAC FIL + ER AYYG+ +LV Y L++
Sbjct: 99 EDDNYTKDGTVDYLGNPANKKQTGTWKACPFILGNECCERLAYYGMSTNLVLYFKKQLNQ 278
Query: 62 NVVTSITSVSNWSGLSWITPILGAYIADSYLGRFWTITLSLLIYAMGLGLLVLTSS 117
+ T+ +VSNWSG +ITP++GA++ADSYLGR+WTI +IY +G+ LL L++S
Sbjct: 279 HSATASKNVSNWSGTCYITPLIGAFLADSYLGRYWTIACFSIIYVIGMTLLTLSAS 446
>AW720047
Length = 419
Score = 119 bits (297), Expect = 2e-27
Identities = 55/132 (41%), Positives = 90/132 (67%), Gaps = 1/132 (0%)
Frame = +3
Query: 27 WKACTFILVYQVFERFAYYGIGADLVNYMTVHLHKNVVTSITSVSNWSGLSWITPILGAY 86
WKAC FIL ER AYYGI +LV Y+T L++ V++ +V+ + G ++TP++G++
Sbjct: 6 WKACPFILGSFFCERLAYYGIATNLVIYLTTKLNEGTVSAAKNVNTFHGTCYLTPLIGSF 185
Query: 87 IADSYLGRFWTITLSLLIYAMGLGLLVLTSSLKGLGPT-CENGVCKEASNFQLAFFYLSI 145
+AD+Y GR+WTIT+ +Y +G+ +L+L++++ L P C N VC A+ Q F+L +
Sbjct: 186 LADAYWGRYWTITVFYAVYLIGMCILILSATIPALKPAECVNSVC-TATLAQSVXFFLGL 362
Query: 146 YTIAIGSGAVKP 157
Y+IA+G+G +KP
Sbjct: 363 YSIALGTGGIKP 398
>TC18768
Length = 738
Score = 112 bits (281), Expect(2) = 2e-26
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Frame = +2
Query: 270 LHEFEMEHYVSSGRRKLH---------HTPCFRFLDKAAI----TESNTDNSN-PPCTVT 315
LH F+ +H S + LH HT FRFLDKA I SNT S+ C+V
Sbjct: 155 LHFFKRKHIYPSNPQMLHGDQNNVGQVHTDKFRFLDKACIRVEEAGSNTKKSSWRLCSVG 334
Query: 316 QVEKAKVVIGMFHIWLLMLIPSNFWAVEVTIFVKQGTTMDRSLGPHFHFPAASLWSFAVF 375
QVE+ K+++ + I+ ++ + A T V+QG+ MD L FH P ASL S
Sbjct: 335 QVEQVKILLSVIPIFSCTIVFNTILAQLQTFSVQQGSAMDTHLTKSFHIPPASLQSIPYI 514
Query: 376 TMVISLPIYDNFFIPFMRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVEIQRMHVIRK 435
++I +P+YD FF+PF RR TG+ G+ L+R+G G+ + + +E +R
Sbjct: 515 LLIIVVPLYDTFFVPFARRITGHESGISPLRRIGFGLFLATFSMVSAALLEKKRRDEALN 694
Query: 436 HNIVGPKEVVPMSIFWLLPQ 455
HN +SIFW+ PQ
Sbjct: 695 HN-------KTLSIFWITPQ 733
Score = 23.9 bits (50), Expect(2) = 2e-26
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 203 IEEKFGWALGYAISAIGFLVAFIAFFLGTPMYRHK 237
I+ G +G+ ISA + I+ GT YR+K
Sbjct: 4 IQTHSGMDVGFGISAAVMAMGLISLISGTFYYRNK 108
>BU494138
Length = 518
Score = 103 bits (258), Expect = 6e-23
Identities = 58/163 (35%), Positives = 85/163 (51%)
Frame = +2
Query: 307 NSNPPCTVTQVEKAKVVIGMFHIWLLMLIPSNFWAVEVTIFVKQGTTMDRSLGPHFHFPA 366
NS ++ QVE+ K + +F IW ++ A + T V Q MDR +G F PA
Sbjct: 2 NSARVVSIQQVEEIKCLARIFPIWAAGILGFTAMAQQGTFTVSQAMKMDRHIGSKFQIPA 181
Query: 367 ASLWSFAVFTMVISLPIYDNFFIPFMRRHTGNHRGVKLLQRVGIGIAIQIIGIAVTYAVE 426
SL + T+ + +P YD FF+P +RR T + G+ LLQR+GIG+ ++ + V VE
Sbjct: 182 GSLGVISFITIGLWVPFYDRFFVPAVRRITKHEGGITLLQRIGIGMVFSVLSMIVAGLVE 361
Query: 427 IQRMHVIRKHNIVGPKEVVPMSIFWLLPQNVIFGVANTFLASG 469
R V + P + PMS+ WL PQ V+ G+ F A G
Sbjct: 362 KVRRGVANSN--PNPLGIAPMSVMWLAPQLVLMGLCEAFNAIG 484
>TC12979 similar to UP|Q9LQL2 (Q9LQL2) F5D14.23 protein, partial (25%)
Length = 601
Score = 93.2 bits (230), Expect = 1e-19
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = +3
Query: 2 EAQAHTLDGTVDLGGRPVISSVTGKWKACTFILVYQVFERFAYYGIGADLVNYMTVHLHK 61
EA+ TLDG+VD GRP I + +G+W A T IL+ Q A++G+G +LV ++T L +
Sbjct: 150 EAEEVTLDGSVDWHGRPAIRAKSGRWVAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQ 329
Query: 62 NVVTSITSVSNWSGLSWITPILGAYIADSYLGRFWTITLSLLIYAMGLGLLVLTSSLKGL 121
+ + +VS W+G ++ ++GA+++DSY GR+ T + I+ +GL L L+S L L
Sbjct: 330 DNADAANNVSKWTGTVYLFSLVGAFLSDSYWGRYKTCAIFQGIFVLGLVFLSLSSYLSLL 509
Query: 122 GPT-CENGV--CKEASNFQLAFFYLSIYTI 148
P C + + C + S+ ++ F Y I
Sbjct: 510 RPKGCGSELLHCGKHSSLEMGMFSYQSYLI 599
>TC13937 weakly similar to UP|Q9LVE0 (Q9LVE0) Nitrate transporter
(AT3g21670/MIL23_23), partial (27%)
Length = 558
Score = 92.8 bits (229), Expect = 1e-19
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Frame = +2
Query: 5 AHTLDGTVDLGGRPVISSVTGKWKACTFILVYQVFERFAYYGIGADLVNYMTVHLHKNVV 64
A + VD GRP S TG W A IL ++ ++ GI ++V Y+ L+
Sbjct: 62 AEDIAAAVDYLGRPPDKSKTGGWTAAWLILGVELAQKIMVLGISMNIVTYLVGVLNLPTA 241
Query: 65 TSITSVSNWSGLSWITPILGAYIADSYLGRFWTITLSLLIYAMGLGLLVLTSSLKGL-GP 123
S T V+N G + +LG ++AD LGR+ TI +S I A+G+ LL +++ + P
Sbjct: 242 YSATIVTNCLGTMNLVSLLGGFLADVKLGRYLTIAISATISAVGMCLLTGATTIPSMKAP 421
Query: 124 TC-----ENGVCKEASNFQLAFFYLSIYTIAIGSGAVKPNMSTFG 163
C ++ C EAS Q+A +++YTIA+G+G +K ++S FG
Sbjct: 422 PCSSVQRQHHECIEASGKQVALLLVALYTIAVGAGGIKSSVSGFG 556
>CB828533
Length = 557
Score = 90.5 bits (223), Expect = 7e-19
Identities = 46/109 (42%), Positives = 71/109 (64%), Gaps = 1/109 (0%)
Frame = +1
Query: 130 CKEASNFQLAFFYLSIYTIAIGSGAVKPNMSTFGADQFDDFKPGEKEHKVSFFNWWVFTT 189
C EAS Q+A +++YTIA+G+G +K ++S FG+DQFD P E++ V FFN + F
Sbjct: 187 CIEASGKQVALLLVALYTIAVGAGGIKSSVSGFGSDQFDTTDPREEKKMVFFFNRFYFFV 366
Query: 190 ACGTLASTLFVVYIEEKFGWALGYAISAIGFLVAFIAFFL-GTPMYRHK 237
+ G+L S L +VY+++ G G+ I A G ++ +AF L G P+YR+K
Sbjct: 367 STGSLFSVLVLVYVQDNIGRGWGFGIPA-GIMLVSLAFLLYGKPLYRYK 510
>BI420182
Length = 506
Score = 86.7 bits (213), Expect = 1e-17
Identities = 40/110 (36%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +3
Query: 32 FILVYQVFERFAYYGIGADLVNYMTVHLHKNVVTSITSVSNWSGLSWITPILGAYIADSY 91
FI ++ E+ A G ++++Y+T LH + + +++N+ G + +TP+LGA+I+DSY
Sbjct: 171 FIFANEICEKLAVVGFSTNMISYLTTQLHMPLTKAANTLTNFGGTASLTPLLGAFISDSY 350
Query: 92 LGRFWTITLSLLIYAMGLGLLVLTSSLKGLGPTCENG--VCKEASNFQLA 139
G+FWTIT++ ++Y +G+ L +++ L L P G VCK+A++ QLA
Sbjct: 351 AGKFWTITMASVLYQIGMVSLTISAVLPQLRPPPCRGEEVCKQATDGQLA 500
>BP076619
Length = 432
Score = 85.9 bits (211), Expect = 2e-17
Identities = 37/106 (34%), Positives = 62/106 (57%)
Frame = -3
Query: 458 IFGVANTFLASGLLEFFYDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVTVVDKVTRKMCD 517
+FGV+ F GL EFFYDQ P E++ LG Y S G++ + FL++V++ VT K
Sbjct: 427 LFGVSEVFTLVGLQEFFYDQVPNELRSLGLALYLSIFGVGSFLSGFLISVIETVTGKDGP 248
Query: 518 HSWIGDNLNESHLDHYYAFLFVIAIFNFGVFLWVSNGYIYKKECTS 563
W +NL+++H+D++Y L ++ F +F+ + Y+Y + S
Sbjct: 247 DRWFANNLHKAHIDYFYWLLAGFSVVGFAMFMCFAKSYVYNHQGAS 110
>BP043790
Length = 477
Score = 84.3 bits (207), Expect = 5e-17
Identities = 36/84 (42%), Positives = 61/84 (71%)
Frame = -1
Query: 474 FYDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVTVVDKVTRKMCDHSWIGDNLNESHLDHY 533
FYDQ+PE MK LGT+++T+++ G++ ++FL++ V +T++ W+ DNLN S LD+Y
Sbjct: 477 FYDQAPEGMKSLGTSYFTTSLGLGSFLSTFLLSTVADITKRNGHKGWVLDNLNISRLDYY 298
Query: 534 YAFLFVIAIFNFGVFLWVSNGYIY 557
YAF+ V+++ NF FL V+ ++Y
Sbjct: 297 YAFMAVLSLLNFLCFLVVAKMFVY 226
>TC18700 similar to UP|Q9LYR6 (Q9LYR6) Peptide transporter-like protein,
partial (18%)
Length = 615
Score = 80.9 bits (198), Expect = 5e-16
Identities = 36/123 (29%), Positives = 68/123 (55%)
Frame = +1
Query: 447 MSIFWLLPQNVIFGVANTFLASGLLEFFYDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVT 506
+S +WLL Q + GVA F GLLEF Y+++P+ MK +G+ + G + + + +
Sbjct: 46 LSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAATIINS 225
Query: 507 VVDKVTRKMCDHSWIGDNLNESHLDHYYAFLFVIAIFNFGVFLWVSNGYIYKKECTSTTE 566
++ +T K SW+ N+N D++Y L +++ NF +F++ ++ Y Y+ + E
Sbjct: 226 IIKSLTGKEGKESWLAQNINTGRFDYFYWILTALSLVNFCIFIYSAHRYKYRTQQVYEME 405
Query: 567 PND 569
+D
Sbjct: 406 KHD 414
>BP071089
Length = 393
Score = 77.8 bits (190), Expect = 4e-15
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = -3
Query: 475 YDQSPEEMKVLGTTFYTSTMAGGNYFNSFLVTVVDKVTRKMCDHSWIGDNLNESHLDHYY 534
Y ++P+ M+ L + +T A GNY ++ LV +V KVT WI DN+N HLD++Y
Sbjct: 391 YGEAPDAMRSLCSALSLTTNALGNYVSTLLVIIVTKVTTSSGSLGWIPDNMNRGHLDYFY 212
Query: 535 AFLFVIAIFNFGVFLWVSNGYIYKK 559
L V+++ NF V+LW++ Y YKK
Sbjct: 211 WLLTVLSLLNFLVYLWIAKRYTYKK 137
>TC19180 similar to PIR|T10255|T10255 nitrite transport protein, chloroplast
- cucumber {Cucumis sativus;} , partial (12%)
Length = 408
Score = 77.4 bits (189), Expect = 6e-15
Identities = 47/129 (36%), Positives = 66/129 (50%), Gaps = 5/129 (3%)
Frame = +1
Query: 306 DNSNPPC-----TVTQVEKAKVVIGMFHIWLLMLIPSNFWAVEVTIFVKQGTTMDRSLGP 360
DNS P TV +VE+ K +I M IW ++ +A + T ++Q TMDR +
Sbjct: 16 DNSKTPNKWRLNTVHRVEELKSIIRMGPIWASGILLITAYAQQGTFSLQQAKTMDRHITK 195
Query: 361 HFHFPAASLWSFAVFTMVISLPIYDNFFIPFMRRHTGNHRGVKLLQRVGIGIAIQIIGIA 420
F PA S+ F + TM+ + +YD I RR TG RG+ L R+GIG I I
Sbjct: 196 SFQIPAGSMSVFTIITMLTTTALYDRVLIRVARRFTGLDRGISFLHRMGIGFVISTIATF 375
Query: 421 VTYAVEIQR 429
V VE++R
Sbjct: 376 VAGFVEMKR 402
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.326 0.140 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,657,465
Number of Sequences: 28460
Number of extensions: 179564
Number of successful extensions: 1217
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of query: 573
length of database: 4,897,600
effective HSP length: 95
effective length of query: 478
effective length of database: 2,193,900
effective search space: 1048684200
effective search space used: 1048684200
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0248.6