BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0234.16
(747 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 47 1e-05
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 42 5e-04
TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment),... 41 6e-04
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 40 0.002
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 39 0.002
TC9979 similar to UP|HIR5_MOUSE (Q9QZ23) HIRA-interacting protei... 38 0.007
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 35 0.033
TC9962 similar to UP|Q8L7Z6 (Q8L7Z6) AT3g54680/T5N23_40, partial... 35 0.033
TC16697 35 0.044
AV777541 35 0.044
TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II ... 35 0.057
AV427333 35 0.057
TC9030 similar to GB|AAM63479.1|21554372|AY086477 phospholipase-... 35 0.057
TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, ... 34 0.075
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 34 0.075
TC17431 similar to UP|Q44395 (Q44395) Ti plasmid pTi15955 T-DNA ... 34 0.075
TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, parti... 34 0.097
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 34 0.097
TC14123 similar to UP|Q93X25 (Q93X25) 2-Cys peroxiredoxin, parti... 34 0.097
TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17... 34 0.097
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/188 (27%), Positives = 74/188 (39%), Gaps = 5/188 (2%)
Frame = +1
Query: 317 PLTPIPESQPAAQTTSPPHSPRSSFFQP---SPNEAPLWNNFRTNPPDPLIQPHPSPSKH 373
P TP P +QP T PP +P S+ P SP +AP NN P P P P+ S+
Sbjct: 40 PKTPSPGNQPP-HTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPT-SQP 213
Query: 374 QNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCP 433
+ LP + QP H+ P+ PP T +P+ + P
Sbjct: 214 PYIPLPPKTPSPISQPPHV-PT--------PPSTPSPISQPPYT---------------P 321
Query: 434 SPRRYPGPRPERLVDPDEPILANPLHEA--DPLAQQVQPAPHQQQPVQPEPEPEQSVSNH 491
+P + P P + P P +P+ + P + P+P Q P P P P S
Sbjct: 322 TPPKTPSPTSQPPHTPTPPNTPSPISQPPYTPTPPKT-PSPTNQPPHIPSP-PNSSSPTS 495
Query: 492 SSVRSPNP 499
+P+P
Sbjct: 496 QPPNTPSP 519
Score = 33.5 bits (75), Expect = 0.13
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +1
Query: 306 PISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQ 365
PIS + P TP P SQP T +PP + PSP P N P P+ Q
Sbjct: 247 PISQPPHVPTPPSTPSPISQP-PYTPTPPKT-------PSPTSQPPHTPTPPNTPSPISQ 402
Query: 366 PHPSPSKHQNVWLPELLIQTLPQPIHL-YPSQLMLLTLLPPITLNP 410
P +P+ P QP H+ P T PP T +P
Sbjct: 403 PPYTPT-------PPKTPSPTNQPPHIPSPPNSSSPTSQPPNTPSP 519
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 41.6 bits (96), Expect = 5e-04
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Frame = +3
Query: 313 QSSNPLTPIPESQPAAQTTS------PPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQP 366
QS PL P P S P +++ PPH P++ P P P N + P+P+ P
Sbjct: 66 QSQPPLQP-PSSLPQTSSSTTPPISAPPHPPQNPNPTPIPAPNPNPNPIQIQNPNPIHNP 242
Query: 367 HPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPP 405
+P P+ P P P PS + LPP
Sbjct: 243 NPRPTPTPPQPRPPPTFNRAPPPQQQQPSHFSHFSSLPP 359
Score = 35.0 bits (79), Expect = 0.044
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 433 PSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHS 492
P P P P P ++ +P NP+H +P P P P P+Q +H
Sbjct: 174 PIPAPNPNPNPIQIQNP------NPIHNPNPRPTPTPPQPRPPPTFNRAPPPQQQQPSHF 335
Query: 493 SVRSPNPLVATSEPHLGASEPHVQTCDIGSP 523
S S P + P +S + I +P
Sbjct: 336 SHFSSLPPSSAPSPSPASSFNSTPSPSIPAP 428
>TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment), partial
(79%)
Length = 1017
Score = 41.2 bits (95), Expect = 6e-04
Identities = 51/196 (26%), Positives = 66/196 (33%), Gaps = 15/196 (7%)
Frame = +3
Query: 319 TPIPESQPAAQTTSPP--HSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHP------SP 370
+P P +P + + PP HSP + +P P +PP P +PHP P
Sbjct: 120 SPPPPPKPYSYHSPPPPVHSPPPPYEKPHP--------VYHSPPPPYEKPHPVYHSPPPP 275
Query: 371 SKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLEN-SWRSEKEKVSTLEE-- 427
H+ P + P P H YP P P ++ + S V T
Sbjct: 276 PPHKPYKYP-----SPPPPPHKYPHPHPHPVYHSPPPPPPKKHYKYSSPPPPVHTYPHPH 440
Query: 428 --YYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPV--QPEPE 483
Y+ P YP P P P P P A P V PH PV P P
Sbjct: 441 PVYHSPPPPVHTYPHPHPVYHSPPPPPPHEKPYKYASPPPPPVHTYPH---PVYHSPPPP 611
Query: 484 PEQSVSNHSSVRSPNP 499
H +SP P
Sbjct: 612 VHSPPPPHYYYKSPPP 659
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 39.7 bits (91), Expect = 0.002
Identities = 21/73 (28%), Positives = 33/73 (44%)
Frame = -1
Query: 317 PLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNV 376
PL +P Q P P + P+PN P PP+P++ P P+P++
Sbjct: 739 PLRRRRRMKPPLQPLRQPQPPTPNLLNPNPNPIP--------PPNPILSPTPTPTRPPPH 584
Query: 377 WLPELLIQTLPQP 389
LP L +++ P P
Sbjct: 583 PLPLLTLKSNPSP 545
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 39.3 bits (90), Expect = 0.002
Identities = 50/203 (24%), Positives = 69/203 (33%), Gaps = 9/203 (4%)
Frame = +1
Query: 313 QSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSK 372
+S P P+P+ PP+ +S P P+ +P + +PP P P P P
Sbjct: 16 KSPPPPPPVPKPYYYKSPPPPPYYYKSP---PPPSPSPPPPYYYQSPPPPSHSP-PPPYY 183
Query: 373 HQNVWLPELLIQTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEE--YYL 430
+++ P P P + Y S PP + +P + S + YY
Sbjct: 184 YKSPPPP----SPSPPPPYYYKSP-------PPPSPSPPPPYYYKSPPPPSPIPHPPYYY 330
Query: 431 TCPSPRRYPGPRPERLVDPDEPILA--NPLHEADPLAQQVQPAP-----HQQQPVQPEPE 483
P P P P V P P + P H A P PAP PV+ P
Sbjct: 331 KSPPPPTSSPPPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTYIYKSPPPPVKLPPP 510
Query: 484 PEQSVSNHSSVRSPNPLVATSEP 506
P S SP P P
Sbjct: 511 PYHYTSPPPPSPSPAPTYIYKSP 579
>TC9979 similar to UP|HIR5_MOUSE (Q9QZ23) HIRA-interacting protein 5
(mHIRIP5), partial (36%)
Length = 1304
Score = 37.7 bits (86), Expect = 0.007
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +3
Query: 332 SPPHSPRSSFFQP---SPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQ 388
SPP RSS P SP P +F +PPD + P SK + P L TL
Sbjct: 90 SPPQRRRSSLPMPLLLSPLPPPPLFHFSDSPPD---KGEPCSSKRSRLQTPCLSCFTLAS 260
Query: 389 PIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPG 440
+ + TL+PP L L +S S VS+L+ P+P+ PG
Sbjct: 261 LLWKLEAPTSP-TLVPP*ILPSLNHSSPSTGLLVSSLDRISSRLPNPKMLPG 413
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 35.4 bits (80), Expect = 0.033
Identities = 55/221 (24%), Positives = 70/221 (30%), Gaps = 3/221 (1%)
Frame = -3
Query: 326 PAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQT 385
P Q PP +P SS P P + N P + P P P H P
Sbjct: 708 PLQQRRQPPWNPPSSTPHYPPPHRPYYENTL-----PSLPPSPPPPPHSRTSQPPP---- 556
Query: 386 LPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPER 445
PQ P PP L RS + TL PSP P P+P R
Sbjct: 555 -PQADTAAPGTP------PPPELRRDRQKQRSSRTSSRTLSPRSPRPPSPSCSPPPKPNR 397
Query: 446 LVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSE 505
+ LA P P + P S H S +P+P +E
Sbjct: 396 TA------------KRRRLASAPDPPP-MMMTTKSSPGTVISAQTHESPSAPSP----TE 268
Query: 506 PHLGA---SEPHVQTCDIGSPQGASEAHSSNHPASPETNLS 543
+L S P T +S HSS SP+ +L+
Sbjct: 267 ENLRRRR*SSPGSCT-SFAEFSASSGEHSSTPSRSPQRSLA 148
>TC9962 similar to UP|Q8L7Z6 (Q8L7Z6) AT3g54680/T5N23_40, partial (21%)
Length = 585
Score = 35.4 bits (80), Expect = 0.033
Identities = 38/141 (26%), Positives = 53/141 (36%)
Frame = +1
Query: 336 SPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPS 395
S +S +Q + + PL + T P P P P P+ H L LL+ TLP PI L+P
Sbjct: 52 SVQSGGWQKTTSMLPLTSTTSTRNP*PPRTPPPPPT-HPRTLLLLLLLHTLPLPILLFPH 228
Query: 396 QLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILA 455
NP+ S + P P P P RL L
Sbjct: 229 -----------PTNPMAGS---------------SS*PDPLPNPSRTPPRLHRHSHNHLP 330
Query: 456 NPLHEADPLAQQVQPAPHQQQ 476
NP P ++ PAP++ +
Sbjct: 331 NPARSNVP---RITPAPNRDR 384
Score = 28.5 bits (62), Expect = 4.1
Identities = 25/95 (26%), Positives = 38/95 (39%), Gaps = 1/95 (1%)
Frame = +3
Query: 391 HLYPSQLMLLTLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPD 450
H+Y + T T NP +N + ++ ++ P+ P R L P
Sbjct: 108 HIYEKSIT--TKNTTTTTNPSKNPSLAPSSSYASASYSAVSAPNK---PHGRILVLTRPT 272
Query: 451 EPILANPLHEADPLAQQV-QPAPHQQQPVQPEPEP 484
+ +P A P Q QP+P Q+ P P PEP
Sbjct: 273 PKPVTHPTTPAPPQPQPPSQPSPIQRAPDHPRPEP 377
>TC16697
Length = 635
Score = 35.0 bits (79), Expect = 0.044
Identities = 20/55 (36%), Positives = 26/55 (46%)
Frame = -1
Query: 315 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPS 369
S+P P P + A T+PP + S P PN + T+P P QPHPS
Sbjct: 548 SSPSPPAPSQRKPAPATAPPSNSSQS---PPPNPSS------TDPTSPAPQPHPS 411
>AV777541
Length = 466
Score = 35.0 bits (79), Expect = 0.044
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = +1
Query: 606 QLLHAEGSQRIEAAKQRFARRVALHEQEQRQ-----KLLEAIEEARRKQEQAEEAARLAA 660
+L+ AE QR+ A QR + +E+R+ + AIE+ RRK+E+A+
Sbjct: 124 KLIEAEKLQRL-AEMQRKKEEAQIRREEERKASSAAREARAIEQLRRKEERAK------- 279
Query: 661 AQDEQARLEAERLEA---EAEARR 681
AQ E+A L A++L E+E RR
Sbjct: 280 AQQEEAELLAQKLAERLNESEQRR 351
Score = 32.0 bits (71), Expect = 0.37
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Frame = +1
Query: 614 QRIEAAKQRFARRVALHEQEQRQKLL--EAIEEARRKQEQAEEAARLAAAQ--DEQARLE 669
Q++ ++ R A ++ + + +Q++ L EA+ E RRK +AE+ RLA Q E+A++
Sbjct: 19 QKLHGSELRRAEKLQVIKSKQKEDLAREEAVLE-RRKLIEAEKLQRLAEMQRKKEEAQIR 195
Query: 670 AERLEAEAEARRLAPVVFTPVASASTPANQAAQNVPSSSTHSSSSRLDTVEQRLNTHESM 729
E + A R A + +A Q + RL+ EQR +
Sbjct: 196 REEERKASSAAREARAI--EQLRRKEERAKAQQEEAELLAQKLAERLNESEQRRKIYLEQ 369
Query: 730 LIE---MKQMMMELLRRS 744
+ E ++ LLRRS
Sbjct: 370 IRERANLRDQSSPLLRRS 423
>TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II , partial
(6%)
Length = 583
Score = 34.7 bits (78), Expect = 0.057
Identities = 29/110 (26%), Positives = 43/110 (38%), Gaps = 10/110 (9%)
Frame = -1
Query: 439 PGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEPE----PEQSVSNHSSV 494
P P R + I + E DP P P P+ P P P S + H
Sbjct: 433 PPSSPGRKKSSETAIRPHSASEPDPAPP---PPPPSSPPMSPSPTATSPPTSSPNTHPPT 263
Query: 495 RSPNP------LVATSEPHLGASEPHVQTCDIGSPQGASEAHSSNHPASP 538
+PNP T+ ++ P +T P+ ASE+ +S+ P+SP
Sbjct: 262 PTPNP*SSPSPSTTTA----SSASPSTKTLPSTRPRPASESPTSSSPSSP 125
Score = 28.1 bits (61), Expect = 5.3
Identities = 26/83 (31%), Positives = 34/83 (40%)
Frame = -2
Query: 316 NPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQN 375
+PL P P P PH R F P P + PL + R P PL Q S +
Sbjct: 240 HPLRPQPRHPP-------PHHRRRRF--PQPAQDPLPSPRRRRPRVPLHQALAPASHLRG 88
Query: 376 VWLPELLIQTLPQPIHLYPSQLM 398
L LL TL +P+ P + +
Sbjct: 87 SPLRLLLRLTLRRPLRRPPPRTL 19
>AV427333
Length = 387
Score = 34.7 bits (78), Expect = 0.057
Identities = 19/66 (28%), Positives = 26/66 (38%), Gaps = 7/66 (10%)
Frame = +3
Query: 315 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPN-------EAPLWNNFRTNPPDPLIQPH 367
S+ P P P+ +SPP F P P+ P+ PP P + P
Sbjct: 183 SHSFAPPPRGHPSPPPSSPPPPSSHPFTPPPPHVRPPPSPHHPITPPPHVRPPPPPLPPS 362
Query: 368 PSPSKH 373
PSP+ H
Sbjct: 363 PSPNHH 380
Score = 28.9 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 433 PSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQVQPAPHQQQPVQPEP 482
P PR +P P P P H P V+P P P+ P P
Sbjct: 198 PPPRGHPSPPPSSPPPPSS-------HPFTPPPPHVRPPPSPHHPITPPP 326
>TC9030 similar to GB|AAM63479.1|21554372|AY086477 phospholipase-like
protein {Arabidopsis thaliana;}, partial (53%)
Length = 596
Score = 34.7 bits (78), Expect = 0.057
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 463 PLAQQVQPA--PHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEPHLGASEPHVQTCDI 520
P A P+ PH +P Q EP P + S S S + TS P + T D
Sbjct: 166 PAASSFSPSGGPHSLRPNQSEPSPSCTASPASQAGSSSSPPYTS-PKPDSPPAPSTTRDT 342
Query: 521 GSPQGASEAHSSNHPASPETNLSIIP 546
SP G+S + P+S + S IP
Sbjct: 343 ASPTGSSRTSPMSTPSSMTASRSSIP 420
>TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, partial
(24%)
Length = 702
Score = 34.3 bits (77), Expect = 0.075
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Frame = +1
Query: 344 PSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPIHLYPSQLMLLTLL 403
P P+ L ++ PP L+Q H +H L QT +H P L L
Sbjct: 166 PPPHSTSLHSHQPRFPPTNLLQSH---FRH--------LQQTHHMELHHPPLHLARRHLP 312
Query: 404 PPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADP 463
P L P R + + CP P++ P PRP +P+ + P
Sbjct: 313 PKPRLPPRPRKSRPPRLPPPLNLPHSAPCPQPQKQPLPRPH-----TKPLQPHRHETPLP 477
Query: 464 LAQQV-----QPAPHQQQPVQPEPEPEQSVSNHSSVR 495
L QQ+ + A P+ P P P+Q + S R
Sbjct: 478 LPQQLLR*LPRHAHLPHPPLPP*PLPQQPLRRDSGRR 588
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 34.3 bits (77), Expect = 0.075
Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 16/199 (8%)
Frame = +1
Query: 324 SQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNPPDPLIQPHPSPSKHQNVWLPELLI 383
S P +++T+PP S + P+ P ++ T PP P ++ P
Sbjct: 220 SPPESRSTTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCPP 399
Query: 384 QTLPQPIHLYPSQLMLLTLLPPITLNPLENSWRSEKEKVS----TLEEYYLTCPSPRRYP 439
P PS+ PP NP NS + K S T PSP P
Sbjct: 400 PASPAATAPAPSK------TPP---NPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSP 552
Query: 440 GPRPERLVDPDEPILANP--------LHEADPLAQQVQPAPHQQQPVQPEPEPEQSVSNH 491
P + ++P P + P+ +P+ + P P E S+ +
Sbjct: 553 ISTPSSPENQEKPASTPPSAPPRSTSSSSSSPINTPRKPSSATKAPASSPPGSELSLHHS 732
Query: 492 ----SSVRSPNPLVATSEP 506
S S P +++SEP
Sbjct: 733 PPSASRKSSTTPKISSSEP 789
>TC17431 similar to UP|Q44395 (Q44395) Ti plasmid pTi15955 T-DNA region,
partial (12%)
Length = 737
Score = 34.3 bits (77), Expect = 0.075
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 300 NLFDALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNNFRTNP 359
NL +S NP P S P++ T + PR + P E P W R +
Sbjct: 54 NLATLTRVSPAAPSQPNPSPPRTTSSPSSPTRNAASRPRPT----RPGEPPSW---RRST 212
Query: 360 PDPLIQPHPSP 370
P PL P PSP
Sbjct: 213 PWPLSAPAPSP 245
>TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, partial (81%)
Length = 1294
Score = 33.9 bits (76), Expect = 0.097
Identities = 24/89 (26%), Positives = 37/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 463 PLAQQVQPAPHQQQPVQPEPEPEQSVSNHSSVRSPNPLVATSEP---HLGASEPHVQTCD 519
PL + P+ P P P Q ++ SS+ SP+P P A+ P T
Sbjct: 125 PLLSPLSPSA----PPHPSPSSPQPPNSPSSLSSPDPSSPPPPPPPSPPNANPPTTLTPP 292
Query: 520 IGSPQGASEAHSSNHPASPETNLSIIPYT 548
+PQ + S H SP+ + ++P T
Sbjct: 293 SSTPQTQKKTSPSTHQKSPKASSLLLPST 379
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 33.9 bits (76), Expect = 0.097
Identities = 50/206 (24%), Positives = 74/206 (35%), Gaps = 18/206 (8%)
Frame = +3
Query: 295 SDDDLNLFDALPISALLKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNN 354
SD D L + + SS+P P P PAA ++SPP S+ P+P
Sbjct: 54 SDSDPWLLSSAASRSPPSSSSSPSPPPPPHAPAAASSSPP--TPSATLPPTP-------- 203
Query: 355 FRTNPPDPLIQPHPSPSKHQNVWLPELLIQTLPQPI------------HLYP--SQLMLL 400
+PP P P P + N P T P+ H P S +L
Sbjct: 204 ---SPPSPRSDPSPLSTSTTN---PTTSSSTTPKTTTNKSNPNTARLSHAAP*GSPPLLT 365
Query: 401 TLLPPITLNPLENSWRSEKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHE 460
T PP P +S + + S+ + L+ P P GP P A P
Sbjct: 366 TTSPPSVTAPRTSS--ASRLPSSSALDAALSPPLPCTSSGPS-----SPPVTTTAPPCTA 524
Query: 461 ADPLAQQV----QPAPHQQQPVQPEP 482
P+ ++ +PA + P++ P
Sbjct: 525 ISPMTRRSTAPRRPATSRSPPLRLRP 602
>TC14123 similar to UP|Q93X25 (Q93X25) 2-Cys peroxiredoxin, partial (89%)
Length = 1130
Score = 33.9 bits (76), Expect = 0.097
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 301 LFDALPISAL-LKQSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPNEAPLWNN 354
LF P ++L + S NPL+ P S P+ T P HS R SF + +E PL N
Sbjct: 110 LFSPKPTTSLSIPNSLNPLSTKPFSLPSVSLTRPSHS-RRSFLVRATSELPLVGN 271
>TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;}, partial (28%)
Length = 466
Score = 33.9 bits (76), Expect = 0.097
Identities = 20/56 (35%), Positives = 30/56 (52%), Gaps = 3/56 (5%)
Frame = +3
Query: 288 SSKSAVASDDDLNLFDALPISALLKQSSNP---LTPIPESQPAAQTTSPPHSPRSS 340
S+ S V+SD + F P S+L +++P L PIP S+ A+ PP P S+
Sbjct: 129 SALSIVSSDGHVTAFSGTPTSSLTPPATSPSPLLKPIPASRIRARFLPPPPPPTSA 296
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,729,840
Number of Sequences: 28460
Number of extensions: 254796
Number of successful extensions: 2569
Number of sequences better than 10.0: 268
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2446
length of query: 747
length of database: 4,897,600
effective HSP length: 97
effective length of query: 650
effective length of database: 2,136,980
effective search space: 1389037000
effective search space used: 1389037000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0234.16