BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0228b.2
(357 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BI420239 295 1e-80
TC18886 weakly similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/h... 238 1e-63
TC8381 206 4e-54
AV419166 188 1e-48
TC18753 177 2e-45
AV429155 176 7e-45
TC12742 similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/hydrolas... 163 5e-41
AV415524 156 6e-39
TC13086 similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/hydrolas... 156 6e-39
TC17020 weakly similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/h... 135 1e-32
TC13014 133 5e-32
TC19930 weakly similar to UP|Q9AX26 (Q9AX26) GDSL-motif lipase/h... 127 4e-30
TC10565 118 1e-27
AV767701 113 4e-26
AU240152 112 1e-25
TC14230 110 5e-25
BP041040 107 2e-24
BP040561 103 3e-23
AV416139 101 2e-22
TC11616 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like prot... 101 2e-22
>BI420239
Length = 621
Score = 295 bits (754), Expect = 1e-80
Identities = 146/206 (70%), Positives = 174/206 (83%), Gaps = 3/206 (1%)
Frame = +1
Query: 9 LVLSLVLM---VACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDF 65
LVL+LV++ +A Q+ + NSQ VPCLF+FGDSL+DSGNNNNL T +K ++LPYGIDF
Sbjct: 10 LVLALVILLVAIAIRQYCLQRNSQ-VPCLFIFGDSLSDSGNNNNLETDAKVDYLPYGIDF 186
Query: 66 PTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSAGIRQETGTNL 125
PTGPTGRYTNG N IDK+ ++LG E FIPPFANLSGSDILKGVNYASGSAGIR+E+GTNL
Sbjct: 187 PTGPTGRYTNGRNAIDKITELLGLEDFIPPFANLSGSDILKGVNYASGSAGIRKESGTNL 366
Query: 126 GTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIGTNDYEQNYFLPDLFNT 185
GTN+NMGLQ+ H IVSQIS +L GFHKA +L++CLYYV IGTNDYEQNYFLPDLF+T
Sbjct: 367 GTNINMGLQIYFHMAIVSQISARL-GFHKAKRHLSKCLYYVNIGTNDYEQNYFLPDLFDT 543
Query: 186 SRTYTPEQYAKVLTHQLSHYLKALHH 211
S YTPE+YAK L ++LSHYL+ L +
Sbjct: 544 SSKYTPEEYAKDLINRLSHYLQILRN 621
>TC18886 weakly similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif
lipase/hydrolase-like protein, partial (23%)
Length = 547
Score = 238 bits (607), Expect = 1e-63
Identities = 121/162 (74%), Positives = 127/162 (77%)
Frame = +1
Query: 1 MACEIKAWLVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLP 60
MACEIKAWLVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLP
Sbjct: 40 MACEIKAWLVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLP 219
Query: 61 YGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSAGIRQE 120
YGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYAS
Sbjct: 220 YGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASAF------ 381
Query: 121 TGTNLGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQC 162
+ + G G + QH TI + + FH+ C
Sbjct: 382 SRNSAGNRNQFGYKCQHGITIATS*NHSFSNFHQTWRVSQSC 507
Score = 117 bits (294), Expect = 2e-27
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +2
Query: 114 SAGIRQETGTNLGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIG 169
SAGIRQETGTNLGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIG
Sbjct: 380 SAGIRQETGTNLGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIG 547
>TC8381
Length = 844
Score = 206 bits (525), Expect = 4e-54
Identities = 101/145 (69%), Positives = 119/145 (81%), Gaps = 3/145 (2%)
Frame = +3
Query: 211 HVGARKTVVVSLDRLGCIPKVFV--NGSCIEKQNAAAFLFNDQLKSLVDRFNKKTLKGSK 268
H GARKT++V +DRLGCIPK + NGSCIEK+N AAFLFNDQLK+LVDR+N K L SK
Sbjct: 3 HFGARKTIMVGMDRLGCIPKARLTNNGSCIEKENVAAFLFNDQLKALVDRYNHKILPDSK 182
Query: 269 FIFINSTAIIHDKSNGFKFTNAPCCTTN-ERGKCILNGTPCQNRTEYVFWDGIHTSEAAN 327
FIFINSTAIIHD+S+GF T+A CC N RG C+ N TPCQNR++Y FWDGIHT+EAAN
Sbjct: 183 FIFINSTAIIHDQSHGFTITDAACCQLNTTRGVCLPNLTPCQNRSQYKFWDGIHTTEAAN 362
Query: 328 IVTATISYSTSDSAIAHPTNIKHLV 352
I+TAT+SYSTSD IAHP NI+ L+
Sbjct: 363 ILTATVSYSTSDPNIAHPMNIQKLL 437
>AV419166
Length = 270
Score = 188 bits (478), Expect = 1e-48
Identities = 89/89 (100%), Positives = 89/89 (100%)
Frame = +3
Query: 161 QCLYYVYIGTNDYEQNYFLPDLFNTSRTYTPEQYAKVLTHQLSHYLKALHHVGARKTVVV 220
QCLYYVYIGTNDYEQNYFLPDLFNTSRTYTPEQYAKVLTHQLSHYLKALHHVGARKTVVV
Sbjct: 3 QCLYYVYIGTNDYEQNYFLPDLFNTSRTYTPEQYAKVLTHQLSHYLKALHHVGARKTVVV 182
Query: 221 SLDRLGCIPKVFVNGSCIEKQNAAAFLFN 249
SLDRLGCIPKVFVNGSCIEKQNAAAFLFN
Sbjct: 183 SLDRLGCIPKVFVNGSCIEKQNAAAFLFN 269
>TC18753
Length = 562
Score = 177 bits (450), Expect = 2e-45
Identities = 83/169 (49%), Positives = 118/169 (69%)
Frame = +3
Query: 8 WLVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFPT 67
++VL L++ + + +G VPC F FGDSL D+GNNN L +L+KAN+ PYGIDFP
Sbjct: 54 FIVLVLIVCLWSTTTTGVGAEPQVPCFFSFGDSLVDNGNNNRLSSLAKANYRPYGIDFPG 233
Query: 68 GPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSAGIRQETGTNLGT 127
GPTGR++NG +D + ++LGF +IPP+A G DIL+GVNYAS +AGIR+ETG LG
Sbjct: 234 GPTGRFSNGKTSVDVIGELLGFGSYIPPYATTRGQDILRGVNYASAAAGIREETGQQLGG 413
Query: 128 NVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIGTNDYEQN 176
++ Q+Q+++ VSQ+ LG + A NYL++C+Y + IG+NDY N
Sbjct: 414 RISFRGQVQNYQRTVSQLINLLGDENTAANYLSKCIYSIGIGSNDYLNN 560
>AV429155
Length = 393
Score = 176 bits (445), Expect = 7e-45
Identities = 85/126 (67%), Positives = 103/126 (81%), Gaps = 1/126 (0%)
Frame = +3
Query: 1 MACEIKAWLVLSLVLMVA-CMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFL 59
M CE K WL L L+L+VA CMQHSV G + VPCLF+FGDSL+D+GNNNNL T +K+N+
Sbjct: 18 MPCETKTWLFLPLLLLVANCMQHSVHGKPE-VPCLFIFGDSLSDNGNNNNLVTSTKSNYK 194
Query: 60 PYGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSAGIRQ 119
PYGIDFPTGPTGR+TNG +D ++Q+LGFE FIPPFAN S SDILKGVNYAS +AGI
Sbjct: 195 PYGIDFPTGPTGRFTNGPTTVDIISQLLGFENFIPPFANTSDSDILKGVNYASAAAGICV 374
Query: 120 ETGTNL 125
E+GT++
Sbjct: 375 ESGTHM 392
>TC12742 similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/hydrolase-like
protein, partial (6%)
Length = 590
Score = 163 bits (412), Expect = 5e-41
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +3
Query: 283 NGFKFTNAPCCTTNERGKCILNGTPCQNRTEYVFWDGIHTSEAANIVTATISYSTSDSAI 342
NGFKFTNAPCCTTNERGKCILNGTPCQNRTEYVFWDGIHTSEAANIVTATISYSTSDSAI
Sbjct: 3 NGFKFTNAPCCTTNERGKCILNGTPCQNRTEYVFWDGIHTSEAANIVTATISYSTSDSAI 182
Query: 343 AHPTNIKHLVHDILK 357
AHPTNIKHLVHDILK
Sbjct: 183 AHPTNIKHLVHDILK 227
>AV415524
Length = 411
Score = 156 bits (394), Expect = 6e-39
Identities = 67/135 (49%), Positives = 104/135 (76%)
Frame = +2
Query: 46 NNNNLPTLSKANFLPYGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDIL 105
+NN L +L++A+++PYGIDFP GP+GR++NG +D +A++LGF+ FIPP+ + SG DIL
Sbjct: 2 SNNALRSLARADYMPYGIDFPGGPSGRFSNGKTTVDVIAELLGFDDFIPPYVSTSGDDIL 181
Query: 106 KGVNYASGSAGIRQETGTNLGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYY 165
+GVN+AS +AGIR+ETG LG ++ Q+Q++++ VSQ+ LG +A NYL++C+Y
Sbjct: 182 RGVNFASAAAGIREETGQQLGGRISFSGQVQNYQSTVSQVVNILGNEDQAANYLSKCIYS 361
Query: 166 VYIGTNDYEQNYFLP 180
+ +G+NDY NYF+P
Sbjct: 362 IGLGSNDYLNNYFMP 406
>TC13086 similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif lipase/hydrolase-like
protein, partial (35%)
Length = 524
Score = 156 bits (394), Expect = 6e-39
Identities = 75/151 (49%), Positives = 107/151 (70%), Gaps = 5/151 (3%)
Frame = +3
Query: 5 IKAWLVLSLV--LMVACM---QHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFL 59
I W+V++LV +MV C+ + +G VPC F+FGDSL D+GNNN L + +KAN+L
Sbjct: 54 IMKWIVMNLVAVVMVVCLGLWSTTRVGADPQVPCYFIFGDSLVDNGNNNQLNS*AKANYL 233
Query: 60 PYGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSAGIRQ 119
PYGIDF GPTGR++NG +D +A++LGF+ +IPP++ G DILKGVNYAS +AGIR+
Sbjct: 234 PYGIDFGGGPTGRFSNGKTTVDVVAELLGFDSYIPPYSTARGQDILKGVNYASAAAGIRE 413
Query: 120 ETGTNLGTNVNMGLQLQHHRTIVSQISTKLG 150
ETG LG ++ Q+++++ VSQ+ LG
Sbjct: 414 ETGQQLGGRISFSGQVENYQRTVSQVVNLLG 506
>TC17020 weakly similar to UP|Q8LDT8 (Q8LDT8) GDSL-motif
lipase/hydrolase-like protein, partial (8%)
Length = 604
Score = 135 bits (339), Expect = 1e-32
Identities = 63/91 (69%), Positives = 73/91 (79%)
Frame = +3
Query: 262 KTLKGSKFIFINSTAIIHDKSNGFKFTNAPCCTTNERGKCILNGTPCQNRTEYVFWDGIH 321
K SK++FIN+TAIIHDKS GF T CC TN+ G C + TPCQNR EYVFWDGIH
Sbjct: 3 KPFTNSKYVFINTTAIIHDKSQGFTVTEKVCCPTNKDGVCNPDQTPCQNRNEYVFWDGIH 182
Query: 322 TSEAANIVTATISYSTSDSAIAHPTNIKHLV 352
++EAAN+VTATISYSTS++AIAHPTNIK LV
Sbjct: 183 STEAANLVTATISYSTSNTAIAHPTNIKKLV 275
>TC13014
Length = 485
Score = 133 bits (334), Expect = 5e-32
Identities = 65/119 (54%), Positives = 81/119 (67%)
Frame = +2
Query: 234 NGSCIEKQNAAAFLFNDQLKSLVDRFNKKTLKGSKFIFINSTAIIHDKSNGFKFTNAPCC 293
NG+C+E++NAAA +FN++LKS V +FN K SKFIFINSTA S GFK NA CC
Sbjct: 20 NGACVEEENAAAIIFNNKLKSSVPKFNPKFSADSKFIFINSTAGSLGNSLGFKVLNASCC 199
Query: 294 TTNERGKCILNGTPCQNRTEYVFWDGIHTSEAANIVTATISYSTSDSAIAHPTNIKHLV 352
T G CI + PCQNR EY+FWD H ++AANI TA SY+ S+ A +P +IK LV
Sbjct: 200 KTGAHGLCIRDQIPCQNRNEYIFWDEFHPTKAANIFTAFASYNASNPAFTYPIDIKPLV 376
>TC19930 weakly similar to UP|Q9AX26 (Q9AX26) GDSL-motif
lipase/hydrolase-like protein, partial (11%)
Length = 329
Score = 127 bits (318), Expect = 4e-30
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 5/100 (5%)
Frame = +2
Query: 1 MACEIKAWLVLSLVLM---VACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKAN 57
MAC IK WL+++LV++ +A MQ V N+Q VPCLFVFGDSL+DSGNNNNL TL+K
Sbjct: 32 MACGIKTWLIIALVVLLVAIAIMQIFVQRNTQ-VPCLFVFGDSLSDSGNNNNLETLAKVA 208
Query: 58 FLPYGIDFPTG--PTGRYTNGLNPIDKLAQILGFEKFIPP 95
+ PYGIDFPTG PTGRY+NG +DKL ++LGFE FIPP
Sbjct: 209 YPPYGIDFPTGPTPTGRYSNGRTAVDKLTELLGFEDFIPP 328
>TC10565
Length = 616
Score = 118 bits (296), Expect = 1e-27
Identities = 60/116 (51%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +2
Query: 240 KQNAAAFLFNDQLKSLVDRFNKKTLKGSKFIFINSTAIIHDKS--NGFKFTNAPCCTTNE 297
++NAAAF+FND+LKSLV+ FN K SKFIFIN+T+I + + +G T+A CC+
Sbjct: 2 EENAAAFIFNDKLKSLVELFNNKLSATSKFIFINTTSIDQENTLVSGISVTDAACCSPGL 181
Query: 298 RGKCILNGTPCQNRTEYVFWDGIHTSEAANIVTATISYST-SDSAIAHPTNIKHLV 352
G+CI + PC NR++YVFWD HT EA N++TA SY T S+ A +P +IKHLV
Sbjct: 182 LGECIPDEIPCYNRSDYVFWDEFHTPEAWNLLTAIKSYDTSSNQAFTYPLDIKHLV 349
>AV767701
Length = 622
Score = 113 bits (283), Expect = 4e-26
Identities = 65/162 (40%), Positives = 94/162 (57%), Gaps = 2/162 (1%)
Frame = +3
Query: 35 FVFGDSLADSGNNNNLPTLSKANFLPYGIDFPT-GPTGRYTNGLNPIDKLAQILGFEKFI 93
FVFGDSL DSGNNN L T ++A+ PYGID+PT PTGR++NGLN D ++Q LG E +
Sbjct: 138 FVFGDSLVDSGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDLISQQLGAESVL 317
Query: 94 PPFA-NLSGSDILKGVNYASGSAGIRQETGTNLGTNVNMGLQLQHHRTIVSQISTKLGGF 152
P + L G+ +L G N+AS GI +TGT + M QL + ++++++ G
Sbjct: 318 PYLSPQLRGNKLLLGANFASAGIGILNDTGTQFLNIIRMYRQLDYFEEYQHRLASQI-GV 494
Query: 153 HKAVNYLTQCLYYVYIGTNDYEQNYFLPDLFNTSRTYTPEQY 194
K + + L + +G ND+ NY+L SR Y+ Y
Sbjct: 495 TKTKALVDKALVLITVGGNDFVNNYYLVPYSARSRQYSLPDY 620
>AU240152
Length = 300
Score = 112 bits (280), Expect = 1e-25
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Frame = +1
Query: 9 LVLSLVLMVA-CMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFPT 67
+VL L+L+VA MQHSV G + VPCLF+FGDSL+D GNNNNLPT +K+N+ PYGIDFPT
Sbjct: 58 VVLPLLLLVAKSMQHSVHGEPE-VPCLFIFGDSLSDDGNNNNLPTSTKSNYNPYGIDFPT 234
Query: 68 GPTGRYTNGLNPIDKLAQILGF 89
GPTGR+TNG ID + Q+LGF
Sbjct: 235 GPTGRFTNGPTAIDIIGQLLGF 300
>TC14230
Length = 740
Score = 110 bits (274), Expect = 5e-25
Identities = 71/196 (36%), Positives = 104/196 (52%), Gaps = 2/196 (1%)
Frame = +1
Query: 9 LVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFPT- 67
LVL L L QH+ FVFGDSL DSGNN+ L T ++A+ PYGIDFPT
Sbjct: 88 LVLVLFLSSVSAQHT--------RAFFVFGDSLVDSGNNDFLATTARADAPPYGIDFPTH 243
Query: 68 GPTGRYTNGLNPIDKLAQILGFEKFIPPFAN-LSGSDILKGVNYASGSAGIRQETGTNLG 126
PTGR++NGLN D ++ LG E +P + L G +L G N+AS GI +TG
Sbjct: 244 RPTGRFSNGLNIPDLISLELGLEPTLPYLSPLLVGEKLLIGANFASAGIGILNDTGIQFL 423
Query: 127 TNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIGTNDYEQNYFLPDLFNTS 186
+++ QL+ + ++S +G N + + L+ + +G ND+ NY+L S
Sbjct: 424 HIIHIEKQLKLFQQYQKRVSAHIGR-EGTRNLVNRALFLITLGGNDFVNNYYLVPYSARS 600
Query: 187 RTYTPEQYAKVLTHQL 202
R Y+ Y + + +L
Sbjct: 601 RQYSLPDYVRYIISEL 648
>BP041040
Length = 550
Score = 107 bits (268), Expect = 2e-24
Identities = 61/168 (36%), Positives = 96/168 (56%), Gaps = 3/168 (1%)
Frame = +3
Query: 14 VLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFPTG-PTGR 72
+ ++ H +S VP + VFGDS DSGNNN +PT++K+NF PYG DFP G PTGR
Sbjct: 27 LFLIEIFLHISTSSSGKVPAIIVFGDSSVDSGNNNFIPTMAKSNFEPYGRDFPDGNPTGR 206
Query: 73 YTNGLNPIDKLAQILGFEKFIPPFAN--LSGSDILKGVNYASGSAGIRQETGTNLGTNVN 130
++NG D +++ G + IP + + S SD GV +AS G T +N+ +
Sbjct: 207 FSNGRIAPDFISEAFGLKPTIPAYLDPAYSISDFASGVCFASAGTGYDNST-SNVADVIP 383
Query: 131 MGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIGTNDYEQNYF 178
+ ++++++ ++ LG KA + + LY V IGTND+ +NY+
Sbjct: 384 LWKEVEYYKDYRQKLVAYLGD-EKANEIVKEALYLVSIGTNDFLENYY 524
>BP040561
Length = 515
Score = 103 bits (258), Expect = 3e-23
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Frame = +1
Query: 27 NSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFPT-GPTGRYTNGLNPIDKLAQ 85
+S FVFGDSL D+GNN+ L T ++A+ PYGIDFPT PTGR++NGLN D +++
Sbjct: 52 DSTQTRAFFVFGDSLVDNGNNDFLATTARADAPPYGIDFPTHKPTGRFSNGLNIPDLISE 231
Query: 86 ILGFEKFIPPFAN-LSGSDILKGVNYASGSAGIRQETGTNLGTNVNMGLQLQHHRTIVSQ 144
LG E +P + L G +L G N+AS GI +TG ++M QL+ + +
Sbjct: 232 QLGLEPTMPYLSPLLMGEKLLVGANFASAGIGILNDTGFQFLNIIHMYKQLKLFQHYQQR 411
Query: 145 ISTKLG--GFHKAVNYLTQCLYYVYIGTNDYEQNYFL 179
+S ++G G K VN + L + +G ND+ NY+L
Sbjct: 412 LSAQIGPEGTKKLVN---KALVLITLGGNDFVNNYYL 513
>AV416139
Length = 210
Score = 101 bits (252), Expect = 2e-22
Identities = 45/70 (64%), Positives = 56/70 (79%)
Frame = +1
Query: 56 ANFLPYGIDFPTGPTGRYTNGLNPIDKLAQILGFEKFIPPFANLSGSDILKGVNYASGSA 115
AN+ PYGIDFP GPTGR+TNG +D LAQ++GF +IPP + G ++L+GVNYASG+A
Sbjct: 1 ANYRPYGIDFPLGPTGRFTNGRTYVDALAQLMGFRTYIPPSSRARGLELLRGVNYASGAA 180
Query: 116 GIRQETGTNL 125
GIRQETG NL
Sbjct: 181 GIRQETGDNL 210
>TC11616 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like protein,
partial (41%)
Length = 569
Score = 101 bits (252), Expect = 2e-22
Identities = 63/174 (36%), Positives = 96/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 7 AWLVLSLVLMVACMQHSVLGNSQAVPCLFVFGDSLADSGNNNNLPTLSKANFLPYGIDFP 66
A L +VL+VA S ++A FVFGDSL D+GNNN L T ++A+ PYGID P
Sbjct: 56 ASLACYIVLVVALA--SGFRGAEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDTP 229
Query: 67 TG-PTGRYTNGLNPIDKLAQILGFEKFIPPFA-NLSGSDILKGVNYASGSAGIRQETGTN 124
G PTGR++NG N D +++ LG E +P + L+G ++L G N+AS GI +TG
Sbjct: 230 NGRPTGRFSNGRNIPDFISEQLGAEPTLPYLSPELNGDNLLVGANFASAGIGILNDTGIQ 409
Query: 125 LGTNVNMGLQLQHHRTIVSQISTKLGGFHKAVNYLTQCLYYVYIGTNDYEQNYF 178
+ + QL++ ++S +G + + L + +G ND+ NY+
Sbjct: 410 FINIIRIFRQLEYFDEYQQRVSALIGP-EETQRLVNGALVLITLGGNDFVNNYY 568
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,408,760
Number of Sequences: 28460
Number of extensions: 85789
Number of successful extensions: 566
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of query: 357
length of database: 4,897,600
effective HSP length: 91
effective length of query: 266
effective length of database: 2,307,740
effective search space: 613858840
effective search space used: 613858840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0228b.2