TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0227.11
         (425 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8429 weakly similar to UP|BAD03306 (BAD03306) MAP3K-like prote...   396  e-111
AW719881                                                              155  9e-39
AV770798                                                              149  9e-37
BP063326                                                               94  6e-20
BP053195                                                               64  6e-11
TC11022 similar to UP|O81702 (O81702) Gr1-protein, partial (9%)        30  0.99
TC16224 similar to UP|O49575 (O49575) Receptor kinase - like pro...    30  0.99
TC10905 similar to UP|Q94BV2 (Q94BV2) AT5g58570/mzn1_20, partial...    28  2.2
TC9242 similar to PIR|B86320|B86320 3-phosphoserine phosphatase ...    27  4.9
TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fra...    27  6.4
TC15965 homologue to UP|Q8S902 (Q8S902) Syringolide-induced prot...    27  8.4

>TC8429 weakly similar to UP|BAD03306 (BAD03306) MAP3K-like protein kinase,
           partial (55%)
          Length = 1298

 Score =  396 bits (1018), Expect = e-111
 Identities = 196/336 (58%), Positives = 252/336 (74%), Gaps = 3/336 (0%)
 Frame = +3

Query: 17  ILVLLDSSLALK-FKPLQQEGQICVANKN-CNSGLHCETCVTNGNVRPRCTRTQPINPTS 74
           I  L+ +SL    +  L Q  + C  + N C+ GL C  C +      RCTR + I+PTS
Sbjct: 102 IATLVSASLVFGCYYILVQIAETCSRDINDCDLGLQCLECHSQN----RCTRIRTISPTS 269

Query: 75  KVKGLPFNRYSWLTTHNSFALLGQKSMTGSVILSPTNQQDTITDQLNNGVRGLMLDLYDF 134
           KV  LPFN YSWLTTHNSFA  G    TGS +L+ TNQ+D+ITDQL NGVRGLMLD++D+
Sbjct: 270 KVMELPFNEYSWLTTHNSFAAKGVNWSTGSPVLAFTNQEDSITDQLKNGVRGLMLDMWDY 449

Query: 135 ENDVWLCHSFGGQCYNYTAFQPAINVLKEIQVFLEANPSEIVTIIIEDYVTSPKGLTKVF 194
           E+ +WLC    G C  YT FQPA+NVLKE++VFL  +P+EI+TI I+D+VTS  G+ KVF
Sbjct: 450 EDTIWLCR---GPCTKYTTFQPALNVLKEVRVFLVTHPTEIITIFIDDHVTSGNGVNKVF 620

Query: 195 DAAGLRKYWFPVSRMPKNGGDWPKVDDMVQKNQRLVVFTSKASKEASEGIAYEWRYLVEN 254
           D A LRK+WFPVS+MPKNG DWP V  M++KN RL+VFTS AS+EASEGIAYEW Y+VE+
Sbjct: 621 DKARLRKFWFPVSKMPKNGSDWPTVKTMIRKNYRLIVFTSNASREASEGIAYEWNYVVES 800

Query: 255 QYGNGGMKAGSCPNRAESPSMNTTSRSLVLVNFFRDLPD-VAQSCKDNSAPLLSMVSTCN 313
           Q+GN G+K GSC NR ES  MN  ++SLVL+N+FR++ +   ++C+DNS+PL++M+  C 
Sbjct: 801 QFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDEACRDNSSPLIAMMHVCF 980

Query: 314 QAAGKRWPNFIAVDFYKRSDGGGAPEAVDVANGHLV 349
           +AAG RWPNFIAVDFYKR DGGGAPEA+D+AN +L+
Sbjct: 981 RAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNLI 1088


>AW719881 
          Length = 495

 Score =  155 bits (393), Expect = 9e-39
 Identities = 74/127 (58%), Positives = 89/127 (69%)
 Frame = +1

Query: 14  LFTILVLLDSSLALKFKPLQQEGQICVANKNCNSGLHCETCVTNGNVRPRCTRTQPINPT 73
           L  IL L   S + K       G+ C    +C+ GL C+TC  NGN RPRC+R QP NPT
Sbjct: 142 LIAILCLFTCSSSSKI------GETC---GSCDGGLTCQTCPANGNTRPRCSRIQPSNPT 294

Query: 74  SKVKGLPFNRYSWLTTHNSFALLGQKSMTGSVILSPTNQQDTITDQLNNGVRGLMLDLYD 133
           +KVKGLPFNRYSWLT+HNSFA  G +S TGS I++P NQ DT+  QL NGVRG MLD+YD
Sbjct: 295 TKVKGLPFNRYSWLTSHNSFAQAGARSATGSFIIAPMNQDDTVAQQLKNGVRGFMLDMYD 474

Query: 134 FENDVWL 140
           F+ND+WL
Sbjct: 475 FQNDIWL 495


>AV770798 
          Length = 503

 Score =  149 bits (376), Expect = 9e-37
 Identities = 73/147 (49%), Positives = 102/147 (68%), Gaps = 4/147 (2%)
 Frame = +1

Query: 32  LQQEGQI---CVANKNCNSGLHCETCVTNGNVRPRCTRTQPINPTSKVKG-LPFNRYSWL 87
           LQ + Q+   C ++ +C SGL+C +C    + R RC R+   +    +   LPFN+Y++L
Sbjct: 64  LQWKSQLLEECSSDDDCGSGLYCFSCGAKFS-RSRCVRSSITDQFKLINNSLPFNKYAFL 240

Query: 88  TTHNSFALLGQKSMTGSVILSPTNQQDTITDQLNNGVRGLMLDLYDFENDVWLCHSFGGQ 147
           TTHN+FA+ G+ S TG   L+  NQ+D++T QL NG RGLMLD YD++ DVWLCHSF G+
Sbjct: 241 TTHNAFAMDGEPSHTGVPRLTIINQEDSVTQQLKNGGRGLMLDTYDYDGDVWLCHSFQGK 420

Query: 148 CYNYTAFQPAINVLKEIQVFLEANPSE 174
           C++YTAF+PAI+ LKE+  FL ANP E
Sbjct: 421 CHDYTAFEPAIDTLKEVAAFLSANPKE 501


>BP063326 
          Length = 492

 Score = 93.6 bits (231), Expect = 6e-20
 Identities = 43/75 (57%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -3

Query: 257 GNGGMKAGSCPNRAESPSMNTTSRSLVLVNFFRDLPDVA-QSCKDNSAPLLSMVSTCNQA 315
           GN G+K GSC NR ES  MN  ++SLVL+N+FR++ +   ++C+DNS+PL++M+  C +A
Sbjct: 394 GNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDEACRDNSSPLIAMMHVCFRA 215

Query: 316 AGKRWPNFIAVDFYK 330
           AG RWPNFIAVDFYK
Sbjct: 214 AGNRWPNFIAVDFYK 170


>BP053195 
          Length = 417

 Score = 63.5 bits (153), Expect = 6e-11
 Identities = 32/60 (53%), Positives = 39/60 (64%), Gaps = 7/60 (11%)
 Frame = -2

Query: 326 VDFYKRSDGGGAPEAVDVANGHLVCGCGNIATCKVRLT-------PITFIPPHTHLNLHV 378
           VD+Y RSDGGGAPEAVDVA+GHL CGC ++A C+   T       PI+  PP +    HV
Sbjct: 416 VDYYPRSDGGGAPEAVDVASGHLACGCDHLAYCQGNGTFGSCDVPPISPPPPASEATPHV 237


>TC11022 similar to UP|O81702 (O81702) Gr1-protein, partial (9%)
          Length = 514

 Score = 29.6 bits (65), Expect = 0.99
 Identities = 14/39 (35%), Positives = 20/39 (50%)
 Frame = -3

Query: 366 TFIPPHTHLNLHVLNFDLCRKTWDLEHVNYLKLKQLLNM 404
           TF+  H H +L  +N     + W L    +L LKQ +NM
Sbjct: 419 TFLNKHGHSSLATMNLPFYMRKW*LLFPPFLNLKQQINM 303


>TC16224 similar to UP|O49575 (O49575) Receptor kinase - like protein
           (Receptor kinase-like protein), partial (3%)
          Length = 446

 Score = 29.6 bits (65), Expect = 0.99
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 210 PKNGGDWPKVDDMVQKNQRLVVFTSKASKEASEGIAYEWRYLVENQYGNG 259
           PK+GG WP++     + Q L     +  ++  EG  + WR+ + N + NG
Sbjct: 202 PKHGGGWPELRQGTGEIQLLT--DLQPPEQVLEGETWFWRFCLWNGWENG 345


>TC10905 similar to UP|Q94BV2 (Q94BV2) AT5g58570/mzn1_20, partial (76%)
          Length = 955

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 17/56 (30%), Positives = 28/56 (49%), Gaps = 1/56 (1%)
 Frame = +3

Query: 50  HCETCVTNGN-VRPRCTRTQPINPTSKVKGLPFNRYSWLTTHNSFALLGQKSMTGS 104
           H E C+  G   R + TR+         +G+P +RYS  + H+S ++   +S  GS
Sbjct: 402 HLEKCMGKGRKARLKVTRSSTATQKRYSRGIPASRYSSYSNHSSNSI--NRSANGS 563


>TC9242 similar to PIR|B86320|B86320 3-phosphoserine phosphatase [imported]
           - Arabidopsis                thaliana {Arabidopsis
           thaliana;}, partial (35%)
          Length = 516

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +2

Query: 347 HLVCGCGN--IATCKVRLTPITFIPPHTHLNLHVLNFDLC 384
           HL+CGC       CK  L    F  PH  + + V  F +C
Sbjct: 221 HLLCGCSTS*SCCCKS*LASFRF*RPHKFVGVTVFFFFIC 340


>TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fragment),
           partial (48%)
          Length = 679

 Score = 26.9 bits (58), Expect = 6.4
 Identities = 14/36 (38%), Positives = 17/36 (46%), Gaps = 4/36 (11%)
 Frame = +3

Query: 132 YDFENDVWLCHSFGGQCYNY----TAFQPAINVLKE 163
           Y F N + +C  FGG  YN+    T  QP   V  E
Sbjct: 288 YGFSNPLTVCCGFGGPPYNFDLRVTCGQPGYQVCDE 395


>TC15965 homologue to UP|Q8S902 (Q8S902) Syringolide-induced protein 19-1-5,
           partial (86%)
          Length = 1021

 Score = 26.6 bits (57), Expect = 8.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 47  SGLHCETCVTNGNVRPRCTRTQPINPTSKVKGLPFNRYSW 86
           S  HC  C++  +  P+ T    +NPT  V    + R SW
Sbjct: 882 SWYHCNNCISCNSSAPKATCLDLLNPT-LVTATHWMRQSW 766



 Score = 26.6 bits (57), Expect = 8.4
 Identities = 19/59 (32%), Positives = 29/59 (48%), Gaps = 13/59 (22%)
 Frame = +1

Query: 8   LAIATTLFTIL---------VLLDSSLALKFKPL----QQEGQICVANKNCNSGLHCET 53
           LA +T + T+L          ++  SL++  KPL      E  IC+A   C+S L+ ET
Sbjct: 127 LATSTRISTLLGEMVVPRYSTMVTFSLSILTKPLGLASSPEMNICLARLTCSSSLYLET 303


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.321    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,126,667
Number of Sequences: 28460
Number of extensions: 119089
Number of successful extensions: 584
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of query: 425
length of database: 4,897,600
effective HSP length: 93
effective length of query: 332
effective length of database: 2,250,820
effective search space: 747272240
effective search space used: 747272240
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)