BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0226.15
(219 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC9075 similar to UP|Q93VH8 (Q93VH8) 2-oxoglutarate-dependent di... 152 6e-38
TC17084 142 3e-35
AV768266 82 9e-17
TC7936 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, pa... 74 2e-14
TC14685 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partia... 73 4e-14
TC15818 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxyge... 72 6e-14
TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial... 70 4e-13
TC14222 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carb... 70 4e-13
BI417790 68 1e-12
BP059571 67 2e-12
BP043485 66 4e-12
TC14383 homologue to UP|Q8W3Y3 (Q8W3Y3) 1-aminocyclopropane-1-ca... 66 5e-12
TC10874 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxyge... 60 4e-10
TC15185 60 4e-10
TC15759 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxyge... 60 4e-10
BP065280 56 4e-09
TC16602 weakly similar to UP|Q7X9N5 (Q7X9N5) Gibberellin 2-oxida... 55 9e-09
AV766090 54 2e-08
TC18626 54 2e-08
TC8129 similar to UP|Q9XG83 (Q9XG83) GA 2-oxidase, partial (90%) 54 2e-08
>TC9075 similar to UP|Q93VH8 (Q93VH8) 2-oxoglutarate-dependent dioxygenase
(Fragment), partial (26%)
Length = 533
Score = 152 bits (383), Expect = 6e-38
Identities = 76/101 (75%), Positives = 85/101 (83%)
Frame = +3
Query: 119 KPSSESQSFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEE 178
KPSSES F+VM+ D HAWSNGRL+SPFHRVMMTGNEARYS LFS+PKG YIIK PEE
Sbjct: 3 KPSSES--FVVMIGDSLHAWSNGRLHSPFHRVMMTGNEARYSTGLFSIPKGEYIIKTPEE 176
Query: 179 LVDEEHPLLYKPFDLEEFLKHSFNKEKGKRDDQFALHSYCG 219
LVDEEHPLL+KPFD EFLK+ + EKG+R DQFAL +YCG
Sbjct: 177 LVDEEHPLLFKPFDHVEFLKYYYT-EKGQR-DQFALRTYCG 293
>TC17084
Length = 597
Score = 142 bits (359), Expect = 3e-35
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = +1
Query: 1 VKNTSVYEKVETLTKILWPNGNPSFRYALCSFSEHLSELDQIVRKMVLESLGVEKYLDEH 60
+ + +V EKVE + ILWP+GNPSF + SFSE LSELD I+RKMVLESLGVEKYLDEH
Sbjct: 307 IDDANVSEKVEAMANILWPDGNPSFSKTINSFSEQLSELDHIIRKMVLESLGVEKYLDEH 486
Query: 61 LNSTNYFLKTMKYKGPQTSDTKVGLDTHTDTAILTIL 97
LNSTNY L+ MKYKGP+TSDTK+GL TH+D I+TIL
Sbjct: 487 LNSTNYLLRVMKYKGPETSDTKLGLTTHSDKNIVTIL 597
>AV768266
Length = 255
Score = 81.6 bits (200), Expect = 9e-17
Identities = 37/54 (68%), Positives = 45/54 (82%)
Frame = -1
Query: 166 VPKGGYIIKAPEELVDEEHPLLYKPFDLEEFLKHSFNKEKGKRDDQFALHSYCG 219
+PKGGY++KAP+ELVDEEHPLL+KPFD EFLK+ + EKG D+FAL SYCG
Sbjct: 255 IPKGGYMVKAPKELVDEEHPLLFKPFDHVEFLKYYYT-EKGLEGDKFALRSYCG 97
>TC7936 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, partial
(94%)
Length = 1492
Score = 73.9 bits (180), Expect = 2e-14
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Frame = +3
Query: 18 WPNGNPSFRYALCSFSEHLSELDQIVRKMVLESLGVEKY--------LDEHLNSTNYFLK 69
WP+ ++ +SE L L + +++ E++G+EK +D+ + NY+ K
Sbjct: 585 WPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKV-VVNYYPK 761
Query: 70 TMKYKGPQTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIV 129
PQ D +GL HTD +T+L Q QV GL+ +G+ WI+ +P +F+V
Sbjct: 762 C-----PQP-DLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQP--VEGAFVV 917
Query: 130 MMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYK 189
+ D H SNGR + H+ ++ N +R S A F P + P ++ + E ++ +
Sbjct: 918 NLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATV-YPLKVREGEKSVMEE 1094
Query: 190 PFDLEEFLKHSFNKE 204
P E + +K+
Sbjct: 1095PITFAEMYRRKMSKD 1139
>TC14685 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partial (38%)
Length = 1323
Score = 72.8 bits (177), Expect = 4e-14
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Frame = +1
Query: 80 DTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWS 139
D VGL++H D LT++ Q + GL+V T +G W+ KP + ++ + D S
Sbjct: 793 DLTVGLNSHADPGALTVVLQDHIGGLQVRTTEG--WVDVKPL--DGALVINIGDLLQIIS 960
Query: 140 NGRLNSPFHRVMM-TGNEARYSAALFSVPKGGYIIKAP-EELVDEEHPLLYKPFDLEEFL 197
N S HRV+ + NE R S A+F P + P EL E P LY+ F L+EFL
Sbjct: 961 NEEYKSADHRVLANSANEPRVSVAVFLNPGNREKLFGPLPELTSAEKPALYRNFTLDEFL 1140
Query: 198 KHSFNKE 204
F KE
Sbjct: 1141TRFFKKE 1161
>TC15818 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxygenase-like
protein (AT5g05600/MOP10_14), partial (37%)
Length = 618
Score = 72.4 bits (176), Expect = 6e-14
Identities = 48/124 (38%), Positives = 65/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 74 KGPQTSDTKVGLDTHTDTAILTILFQSQ-VDGLEVLTKDGRKWISYKPSSESQSFIVMMN 132
K PQ D +GL H+D LTIL V GL+V + G WI+ KP + FI+ +
Sbjct: 8 KCPQP-DLTLGLSPHSDPGGLTILLPDDFVSGLQV--RKGNYWITVKPVPNA--FIINIG 172
Query: 133 DCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFD 192
D SN S HRV++ N+ R S A+F PK +I+ +ELV EE P LY P
Sbjct: 173 DQIQVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPALYPPMT 352
Query: 193 LEEF 196
+E+
Sbjct: 353 YDEY 364
>TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial (29%)
Length = 1477
Score = 69.7 bits (169), Expect = 4e-13
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Frame = +1
Query: 18 WPNGNPSFRYALCSFSEHLSELDQIVRKMVLESLGVE-KYLDEHLNSTNYFLKTMKYKGP 76
WP +R + +++ L EL + +M+ E LG++ +Y L+ L P
Sbjct: 445 WPLKPARYREVVEKYTKELRELGSQILEMLCEGLGLDPRYCCAGLSENPLLLSNHYPPCP 624
Query: 77 QTSDTKVGLDTHTDTAILTILFQ-SQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCF 135
+ S T +GL H D ++TIL Q + V+ L+V KDG +WIS +P +F+V +
Sbjct: 625 EPSLT-LGLSKHRDPTLVTILLQDTDVNALQVF-KDG-EWISIEPIP--YAFVVNIGLLL 789
Query: 136 HAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFDLEE 195
SNGRL HRV+ + +R + A F PK I++ + LV +Y+ EE
Sbjct: 790 QIISNGRLVGVEHRVVTNSSISRTTVAYFIRPKKEEIVEPAKALVRTGAHPIYRSIAFEE 969
Query: 196 FLK 198
FL+
Sbjct: 970 FLR 978
>TC14222 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carboxylate
oxidase homolog (ACC oxidase) , partial (97%)
Length = 1597
Score = 69.7 bits (169), Expect = 4e-13
Identities = 55/186 (29%), Positives = 90/186 (47%), Gaps = 6/186 (3%)
Frame = +1
Query: 19 PNGNPSFRYALCSFSEHLSELDQIVRKMVLESLGVEK-YLDEHLNST---NYFLKTMKYK 74
P+ + +R + F+ L +L + + ++ E+LG+EK YL + + N+ K Y
Sbjct: 355 PDLDEDYRKVMKEFAVKLEKLAENLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYP 534
Query: 75 GPQTSDTKVGLDTHTDTAILTILFQS-QVDGLEVLTKDGRKWISYKPSSESQSFIVMMND 133
D GL HTD + +LFQ +V GL++L D +WI P S +V + D
Sbjct: 535 PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHS--IVVNLGD 702
Query: 134 CFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIK-APEELVDEEHPLLYKPFD 192
+NG+ S HRV+ + AR S A F P +I AP + ++E +Y F
Sbjct: 703 QLEVITNGKYKSVMHRVIAQTDGARMSLASFYNPGDDAVISPAPSLVKEDETSQVYPKFV 882
Query: 193 LEEFLK 198
E+++K
Sbjct: 883 FEDYMK 900
>BI417790
Length = 610
Score = 68.2 bits (165), Expect = 1e-12
Identities = 38/117 (32%), Positives = 58/117 (49%)
Frame = +3
Query: 80 DTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWS 139
D +G H D+ LTIL Q +V GL+V K +W+ P ++ +I+ + D W
Sbjct: 42 DIVLGCGRHKDSGALTILAQDEVSGLQVRRKCDGQWVRLNPLPDA--YIINVGDVIQVWC 215
Query: 140 NGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFDLEEF 196
N S HRV + +AR S F P ++ EEL +EE+P Y P++ +F
Sbjct: 216 NDAYESVEHRVKLNPEKARLSYPFFLYPSHYTNVEPLEELTNEENPPKYTPYNWGKF 386
>BP059571
Length = 386
Score = 67.0 bits (162), Expect = 2e-12
Identities = 39/102 (38%), Positives = 54/102 (52%)
Frame = +2
Query: 90 DTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGRLNSPFHR 149
D LTIL Q QV GL+V + +W S P + +F+V + D F A SNGR S HR
Sbjct: 77 DPTSLTILHQDQVGGLQVFVDN--EWHSISP--DLNAFVVNIGDTFMALSNGRYKSCLHR 244
Query: 150 VMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPF 191
++ + R S A F P+ ++ P ELVD +P +Y F
Sbjct: 245 AVVNSEKTRKSLAFFLCPRNDKVVTPPCELVDSCNPRIYPDF 370
>BP043485
Length = 522
Score = 66.2 bits (160), Expect = 4e-12
Identities = 34/106 (32%), Positives = 56/106 (52%)
Frame = -2
Query: 104 GLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAAL 163
GLEV K ++W+ +PS ++ +I+ + D WSN S HR M+ + RYS
Sbjct: 521 GLEVKNKANQQWVRVEPSPDA--YIINVGDIIQVWSNDAYESVEHRAMLNSEKQRYSIPF 348
Query: 164 FSVPKGGYIIKAPEELVDEEHPLLYKPFDLEEFLKHSFNKEKGKRD 209
F P +K +ELV+E++P Y+P+ +FL + + KR+
Sbjct: 347 FFFPSHDTEVKPLDELVNEQNPSKYRPYKWGKFLVYRKSTNFRKRN 210
>TC14383 homologue to UP|Q8W3Y3 (Q8W3Y3) 1-aminocyclopropane-1-carboxylic
acid oxidase, complete
Length = 1249
Score = 65.9 bits (159), Expect = 5e-12
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Frame = +3
Query: 19 PNGNPSFRYALCSFSEHLSELDQIVRKMVLESLGVEK-YLDEHLNSTN---YFLKTMKYK 74
P+ +R + F+ + +L + + ++ E+LG+EK YL + + + + K Y
Sbjct: 348 PDLTDEYRKVMKDFALRIEKLSEDLLDLLCENLGLEKGYLKKAFHGSRGPTFGTKVANYP 527
Query: 75 GPQTSDTKVGLDTHTDTAILTILFQS-QVDGLEVLTKDGRKWISYKPSSESQSFIVMMND 133
+ GL HTD + +LFQ +V GL++L KDG +W+ P S +V + D
Sbjct: 528 PCPKPNLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDG-EWVDVPPMRHS--IVVNLGD 695
Query: 134 CFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVD---EEHPLLYKP 190
+NG+ S HRV+ + R S A F P +I EL++ EE LY
Sbjct: 696 QLEVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPELLEKEAEEKNQLYPK 875
Query: 191 FDLEEFLK 198
F E+++K
Sbjct: 876 FVFEDYMK 899
>TC10874 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxygenase-like
protein, partial (38%)
Length = 723
Score = 59.7 bits (143), Expect = 4e-10
Identities = 39/115 (33%), Positives = 59/115 (50%), Gaps = 1/115 (0%)
Frame = +2
Query: 83 VGLDTHTDTAILTILF-QSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNG 141
+GL +H+D +T+L QV GL+V + G WI+ P+ + FIV + D SN
Sbjct: 8 LGLSSHSDPGGMTMLLPDDQVRGLQV--RKGDDWITVNPARHA--FIVNIGDQIQVLSNA 175
Query: 142 RLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFDLEEF 196
S HRV++ ++ R S A F PK I+ +ELV + P LY +E+
Sbjct: 176 IYTSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPVKELVTPDKPALYPAMTFDEY 340
>TC15185
Length = 876
Score = 59.7 bits (143), Expect = 4e-10
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 84 GLDTHTDTAILTILFQSQVDGLEVLT-KDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 142
G HTD ++T+L V GL++ +D + I + +FIV + D WSNG
Sbjct: 18 GAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLERWSNGV 197
Query: 143 LNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFDLEEFLKHSFN 202
S HRV+ G E RYS A F P +++ + +P + P ++L +N
Sbjct: 198 FKSTLHRVLGNGQE-RYSIAYFLEPSHDCLVECLPTCKSDSNPPQFPPILCRDYLSQRYN 374
>TC15759 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxygenase-like
protein, partial (34%)
Length = 929
Score = 59.7 bits (143), Expect = 4e-10
Identities = 40/111 (36%), Positives = 57/111 (51%)
Frame = +2
Query: 96 ILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGRLNSPFHRVMMTGN 155
+L QV GL+V + G WI+ KP + FIV + D SN S HRV++ N
Sbjct: 2 LLPDDQVTGLQV--RKGDNWITVKPVPHA--FIVNIGDQIQVLSNAIYKSVEHRVIVNSN 169
Query: 156 EARYSAALFSVPKGGYIIKAPEELVDEEHPLLYKPFDLEEFLKHSFNKEKG 206
+ R S A F P+G I+ +ELV E+ P LY +E+ + F + KG
Sbjct: 170 KERVSLAFFYNPRGDIPIEPAKELVKEDKPALYTAMTFDEYRR--FIRMKG 316
>BP065280
Length = 470
Score = 56.2 bits (134), Expect = 4e-09
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = -1
Query: 126 SFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHP 185
+FI+ + D WSNG+ S HRV++ + R S F +P ++K EELV+E P
Sbjct: 458 AFIINVGDITEVWSNGKYESVEHRVVVNAEKERLSYPFFFLPAHHVMVKPAEELVNEHXP 279
Query: 186 LLYKPFDLEEFLKHSFNKEKGKRD-DQFALHSY 217
Y+ ++ +F + + KRD D +H +
Sbjct: 278 ARYREYNYGKFYANRNRSDFKKRDVDXIQVHHF 180
>TC16602 weakly similar to UP|Q7X9N5 (Q7X9N5) Gibberellin 2-oxidase, partial
(11%)
Length = 476
Score = 55.1 bits (131), Expect = 9e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 126 SFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYIIKAPEELVDEEHP 185
++I+ + D WSN S HRVM+ + RYS F P +K E+L++E++P
Sbjct: 7 AYIINVGDITQVWSNDAYESVEHRVMVNSEKERYSIPYFFFPAHDTEVKPLEKLINEQNP 186
Query: 186 LLYKPFDLEEFLKHSFNKEKGKRD 209
Y+P+ +FL H N K++
Sbjct: 187 AKYRPYKWGKFLIHRKNSNFEKQN 258
>AV766090
Length = 532
Score = 54.3 bits (129), Expect = 2e-08
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = -1
Query: 114 KWISYKPSSESQSFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYS-AALFSVPKGGYI 172
KW++ +P + F+V + D +SNG+ S HRV++ ++R S A+L S+P +
Sbjct: 526 KWVTVQPIPNA--FVVNIGDHLEIYSNGKYKSVLHRVVVNEVKSRVSVASLHSLPFTCTV 353
Query: 173 IKAPEELVDEEHPLLYKPFDLEEFLKHSFNKEKGKRD 209
+P+ L+DEE+P Y D E FL + ++E K+D
Sbjct: 352 RVSPK-LIDEENPKRYMDTDFETFLAYVSSREPKKKD 245
>TC18626
Length = 469
Score = 54.3 bits (129), Expect = 2e-08
Identities = 29/83 (34%), Positives = 42/83 (49%)
Frame = +2
Query: 114 KWISYKPSSESQSFIVMMNDCFHAWSNGRLNSPFHRVMMTGNEARYSAALFSVPKGGYII 173
+WI KP S FI+ + D WSN S HRVM+ + R+S F P +
Sbjct: 11 EWIRVKPIFNS--FIINVGDMIQVWSNDAYESVEHRVMVNSEKDRFSIPFFLKPALYTDV 184
Query: 174 KAPEELVDEEHPLLYKPFDLEEF 196
K EEL D++HP +Y+ + +F
Sbjct: 185 KPLEELTDDKHPPIYRAINWGQF 253
>TC8129 similar to UP|Q9XG83 (Q9XG83) GA 2-oxidase, partial (90%)
Length = 1278
Score = 54.3 bits (129), Expect = 2e-08
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +2
Query: 83 VGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 142
+G HTD ++++L + GL++ +DG W+S P + SF + + D +NG
Sbjct: 722 IGFGEHTDPQMISVLRSNNTSGLQICLRDG-TWVSIPP--DQTSFFINVGDSLQVMTNGS 892
Query: 143 LNSPFHRVMMTGNEARYSAALF-SVPKGGYIIKAPEELVDEEHPLLYKPFDLEEFLKHSF 201
S HRV+ +R S F P + P LV +E LYK F E+ K ++
Sbjct: 893 FRSVKHRVLSDTAMSRVSMIYFGGAPLTEKLAPLP-SLVSKEEDSLYKEFTWGEYKKAAY 1069
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,750,588
Number of Sequences: 28460
Number of extensions: 47122
Number of successful extensions: 284
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of query: 219
length of database: 4,897,600
effective HSP length: 87
effective length of query: 132
effective length of database: 2,421,580
effective search space: 319648560
effective search space used: 319648560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)
Lotus: description of TM0226.15