Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0224.12
         (426 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CB826981                                                               39  0.002
TC16618                                                                35  0.031
TC9577 weakly similar to UP|ATPD_PEA (Q02758) ATP synthase delta...    34  0.053
CN825562                                                               34  0.053
TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein...    33  0.069
TC13829 similar to UP|P93321 (P93321) Cdc2MsD protein, partial (...    33  0.090
BP029625                                                               33  0.12
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu...    32  0.15
AV779145                                                               32  0.15
BP066689                                                               32  0.20
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar...    32  0.20
BP056890                                                               32  0.20
TC14757 similar to UP|O04361 (O04361) Prohibitin, complete             32  0.20
AI967644                                                               32  0.20
TC19122 similar to UP|Q9LXI5 (Q9LXI5) Zinc finger-like protein, ...    32  0.20
TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, parti...    32  0.20
TC18748 similar to GB|AAN28890.1|23506061|AY143951 At4g02590/T10...    27  0.21
TC17983 similar to UP|Q9XEX5 (Q9XEX5) Cytidine deaminase  , part...    32  0.26
TC15560 similar to SP|Q03173|NDPP_MOUSE NPC derived proline rich...    31  0.34
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ...    31  0.34

>CB826981 
          Length = 591

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 25/68 (36%), Positives = 31/68 (44%)
 Frame = +3

Query: 58  WQHPGCEPYYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVI 117
           WQ   CE Y  K+C  +L N  P   +N         V   EVQG   Q+PP+ QP Q  
Sbjct: 96  WQGACCESYRRKKCLIDL-NLAPAVTENREQEGPSSQVVTQEVQGD--QQPPVAQPPQ-- 260

Query: 118 GLMPPPKA 125
             +PP  A
Sbjct: 261 DALPPEVA 284


>TC16618 
          Length = 1228

 Score = 34.7 bits (78), Expect = 0.031
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
 Frame = +3

Query: 115 QVIGLMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQG---ARVALSSPHAKGGS 171
           Q + L+PPP     + +    SS    T+PQQP P+   P      +R    SP      
Sbjct: 594 QTLFLLPPPSISPKLKSPKTQSSLSPSTNPQQPPPASSPPPNSSARSRCLSISPWRTRDP 773

Query: 172 ASSKT----AASSHTS 183
           A SKT    +A+ HT+
Sbjct: 774 ACSKTDGFLSAAKHTT 821


>TC9577 weakly similar to UP|ATPD_PEA (Q02758) ATP synthase delta chain,
           chloroplast precursor  , partial (54%)
          Length = 627

 Score = 33.9 bits (76), Expect = 0.053
 Identities = 44/184 (23%), Positives = 67/184 (35%), Gaps = 15/184 (8%)
 Frame = +3

Query: 51  FNSKPIAWQHPGCEPYYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPI 110
           FNS     +     P+   +      + PP  ++  PSP  E +   +    S  + PP 
Sbjct: 9   FNSTTTLLRLSSLSPFLPSQKWRRRCSTPP--LRFKPSPPPETSSPRNPSSTSPSRAPPS 182

Query: 111 IQPDQVIGLMPPPKADVLVSTHSEP---------SSRQLQTSPQQPQPSPQQPR--QGAR 159
                 +   PPP A    + HSEP         +     TSP    PS   P   + +R
Sbjct: 183 PHSTSNLSQSPPPAAP--AAAHSEPE*TPPPPPATPPHSPTSPAPTNPSTPPPPTWRSSR 356

Query: 160 VALSSPHAKGGS----ASSKTAASSHTSGERLSALLVEDPLSIFQSFFDGTLDLESPPRQ 215
            +  +P     S    ++SKT+ASS T+  R  +           S   GT    S  R+
Sbjct: 357 RSFLTPRCSTISPTQPSASKTSASSSTTLPRARSF----------SHIPGTSSTSSSTRR 506

Query: 216 AETT 219
             T+
Sbjct: 507 GSTS 518


>CN825562 
          Length = 658

 Score = 33.9 bits (76), Expect = 0.053
 Identities = 27/101 (26%), Positives = 39/101 (37%)
 Frame = +3

Query: 85  NMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQTSP 144
           NMPSP +EE V   +  G   ++PP+I  D            +      +P    L+   
Sbjct: 180 NMPSPQKEEEVVKKKYGGMMPKKPPLISKDHERAYFDSADWALGKQGGGKPKG-PLEALR 356

Query: 145 QQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGE 185
            + QP+ QQ R        SP+A  G       +   TS E
Sbjct: 357 PKLQPTQQQTRY-----RKSPYAPSGEEGGSVPSEDATSNE 464


>TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein {Danio
           rerio;} , partial (5%)
          Length = 678

 Score = 33.5 bits (75), Expect = 0.069
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +1

Query: 108 PPIIQPDQVIGLMPPPKADVL-VSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPH 166
           PP++        +PPP   +  ++T S PSSR   T  Q P PSP QP         SP 
Sbjct: 367 PPLLMSATDRAPLPPPSTHLTSLTTPSPPSSRT--TITQTPLPSPPQP--------PSPP 516

Query: 167 AKGGSASSKTAASSHTSGERLSALLVEDPLS 197
            K G A+        +S +R    L+  PL+
Sbjct: 517 PKYGVATIPPPPLPMSSIDRTPLPLLSTPLT 609


>TC13829 similar to UP|P93321 (P93321) Cdc2MsD protein, partial (43%)
          Length = 515

 Score = 33.1 bits (74), Expect = 0.090
 Identities = 23/79 (29%), Positives = 34/79 (42%)
 Frame = +3

Query: 87  PSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQTSPQQ 146
           PS   +EN S D  +      PP          +PPP A  +      P SR  + +PQ+
Sbjct: 162 PSRRSQENPSRDGRRRRPSDRPP--------RSLPPPDALPIHLHRPPPQSRARRQNPQK 317

Query: 147 PQPSPQQPRQGARVALSSP 165
            QP P + R+    A+ +P
Sbjct: 318 QQPPPLRRRRPPSSAV*TP 374


>BP029625 
          Length = 450

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 16/49 (32%), Positives = 27/49 (54%)
 Frame = +1

Query: 106 QEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQP 154
           Q+ PI++  +   L PP  +   ++THS P+      +P+QP   PQ+P
Sbjct: 271 QQTPIVKRTR---LTPPSISSRPITTHSSPAGDPPPPTPKQPTQKPQRP 408


>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
           partial (43%)
          Length = 1038

 Score = 32.3 bits (72), Expect = 0.15
 Identities = 39/174 (22%), Positives = 60/174 (34%), Gaps = 3/174 (1%)
 Frame = +2

Query: 80  PQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQ 139
           P   Q+ P P +           ++   PP+  P  V    PP  A         P S  
Sbjct: 266 PPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPP 445

Query: 140 LQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERLSALLVEDPLSIF 199
             T    P P+   P     V  +SP        SK+ A +        A  +   +S+ 
Sbjct: 446 PAT---PPPPAATPPPALTPVPATSPAPAPAKVKSKSPAPA-------PAPALAPVVSLS 595

Query: 200 QSFFDGTLDLESPPRQAETTETAQSGGVADDSQIEEAFVQLK---GLVFDAGFI 250
            S        E+P     +   A S   +DDS +E+++   K    LVF + F+
Sbjct: 596 PS--------EAPGPSLSSLSPALSPAASDDSGVEKSWSMQKMIGSLVFGSAFL 733


>AV779145 
          Length = 417

 Score = 32.3 bits (72), Expect = 0.15
 Identities = 36/121 (29%), Positives = 49/121 (39%), Gaps = 1/121 (0%)
 Frame = +2

Query: 87  PSPAREENVSHDEVQGSEGQEP-PIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQTSPQ 145
           PSPAR    SH +   S   +P P           P   +    +  S P +  L  SP 
Sbjct: 65  PSPAR---FSHSKPPPSPTTQPTPSPHGTPPHATAPGTASLAAPAATSPPLTSPLSPSPA 235

Query: 146 QPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERLSALLVEDPLSIFQSFFDG 205
              P+P  P      +LSSP     S S  T  +  TS  RLS+L     L++  + F+G
Sbjct: 236 NSPPTPSPP------SLSSPP----SPSPTTRCAPATSHPRLSSLTSLRFLNLSNNLFNG 385

Query: 206 T 206
           T
Sbjct: 386 T 388


>BP066689 
          Length = 470

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -1

Query: 2   SKMAVPRAMWFSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKL 47
           S+  +P  +W+ S    +  SSSSSS  SS SSL+S+ S P  D++
Sbjct: 275 SEGTLPPILWYLS----LGSSSSSSSSSSSCSSLSSSPSTPFSDEI 150


>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
           thaliana;}, partial (44%)
          Length = 700

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -2

Query: 13  SSKPPPIALSSSSSSLESSSSSLNSTES 40
           SS PPP A SSSSSS  SSS S +S+ S
Sbjct: 108 SSSPPPGASSSSSSSPSSSSPSSSSSSS 25



 Score = 28.1 bits (61), Expect = 2.9
 Identities = 21/74 (28%), Positives = 32/74 (42%), Gaps = 4/74 (5%)
 Frame = -2

Query: 123 PKADVLVSTHSEPSSRQLQTSPQQPQP----SPQQPRQGARVALSSPHAKGGSASSKTAA 178
           PK+    S+ S  SS    +S   P P    +P      +  + SSP     S+SS + +
Sbjct: 237 PKSSSSSSSSSSSSSSSSSSSGSPPPPRPPSTPPSSSSSSSSSSSSPPPGASSSSSSSPS 58

Query: 179 SSHTSGERLSALLV 192
           SS  S    S+ L+
Sbjct: 57  SSSPSSSSSSSPLI 16



 Score = 26.6 bits (57), Expect = 8.4
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 18  PIALSSSSSSLESSSSSLNSTESDP 42
           P + SSSSSS  SSSSS +S+ S P
Sbjct: 237 PKSSSSSSSSSSSSSSSSSSSGSPP 163


>BP056890 
          Length = 581

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
 Frame = -2

Query: 165 PHAKGGSASSKTAASSHTSGERLSALLVEDPLSIFQSFFDG--------TLDLESPPR 214
           PH+  GS+SS TA+S+H         L+ DP S+F S +           L L+SPP+
Sbjct: 481 PHSYSGSSSSSTASSTHQKYPH----LIFDPNSVFLSNYRTFRRLETWVALGLDSPPK 320


>TC14757 similar to UP|O04361 (O04361) Prohibitin, complete
          Length = 1141

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 23/65 (35%), Positives = 30/65 (45%)
 Frame = +1

Query: 118 GLMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTA 177
           G  PP +    V+T  +P S   QTSP  P  S   P      +  S  A   S+S+ +A
Sbjct: 7   GSGPPRQISKWVAT--KPQSPSSQTSPAPPSASALPPPPSTPPSTPSMEASAPSSSTDSA 180

Query: 178 ASSHT 182
           ASS T
Sbjct: 181 ASSTT 195


>AI967644 
          Length = 244

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 14/39 (35%), Positives = 22/39 (55%)
 Frame = -1

Query: 117 IGLMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQPR 155
           +GL PPP     ++T+++     LQ+ PQ PQP  +  R
Sbjct: 217 VGLFPPPPPLPKLNTNADNMDHTLQSVPQNPQPERRTRR 101


>TC19122 similar to UP|Q9LXI5 (Q9LXI5) Zinc finger-like protein, partial
           (58%)
          Length = 737

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 30/120 (25%), Positives = 43/120 (35%)
 Frame = -3

Query: 60  HPGCEPYYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGL 119
           HP    +  + C  +  + P    ++ PSP            G+ G      +      L
Sbjct: 693 HPHNHHHVLRSCSASHPSPPGSPSRSAPSPIP*NRTHTRASPGTGGTRKASTRTGT*TRL 514

Query: 120 MPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAAS 179
            P  +A     T S P S   Q  PQQ QP+P          LSSP     + S +TA +
Sbjct: 513 TP--RASCTSRTGSAPPSPTAQKEPQQQQPAP----------LSSPKKSTAAGSPETATT 370


>TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, partial (81%)
          Length = 1294

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 29/121 (23%), Positives = 43/121 (34%), Gaps = 9/121 (7%)
 Frame = +2

Query: 108 PPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQTSPQQ---------PQPSPQQPRQGA 158
           PP++ P   +    PP        H  PSS Q   SP           P P P  P    
Sbjct: 122 PPLLSP---LSPSAPP--------HPSPSSPQPPNSPSSLSSPDPSSPPPPPPPSPPNAN 268

Query: 159 RVALSSPHAKGGSASSKTAASSHTSGERLSALLVEDPLSIFQSFFDGTLDLESPPRQAET 218
                +P +       KT+ S+H    + S+LL+    +            +SPPR  ++
Sbjct: 269 PPTTLTPPSSTPQTQKKTSPSTHQKSPKASSLLLPSTTA------PSKPRTKSPPRMRKS 430

Query: 219 T 219
           T
Sbjct: 431 T 433


>TC18748 similar to GB|AAN28890.1|23506061|AY143951 At4g02590/T10P11_13
           {Arabidopsis thaliana;}, partial (36%)
          Length = 803

 Score = 26.9 bits (58), Expect(2) = 0.21
 Identities = 24/87 (27%), Positives = 36/87 (40%), Gaps = 7/87 (8%)
 Frame = +1

Query: 88  SPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVST------HSEPSSRQLQ 141
           SP  +  +S D+ +G        ++PD   G     + DV+V        H +P      
Sbjct: 265 SPVYQLGLSLDQGKGGG-----FLKPDDASGSGNRFREDVVVGARHKNAFHGQPMPT--- 420

Query: 142 TSPQQPQPSPQQPRQGARVA-LSSPHA 167
           T P  P P P +PR  AR    + PH+
Sbjct: 421 TVPSAPHPPPMRPRVRARRGQATDPHS 501



 Score = 23.5 bits (49), Expect(2) = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 16  PPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTK 69
           PPP   SSS SS  +S +SL  TE   +   L    +S P     P  EP +T+
Sbjct: 119 PPPPTTSSSKSS--ASQTSLPPTEPTLLPCTLR*CCSSTPAT--SPPAEPAFTR 268


>TC17983 similar to UP|Q9XEX5 (Q9XEX5) Cytidine deaminase  , partial (42%)
          Length = 519

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 15/40 (37%), Positives = 22/40 (54%)
 Frame = +2

Query: 135 PSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASS 174
           P+S Q  ++PQ+P P    P  G+  +  SPH  G S+ S
Sbjct: 98  PNSSQASSTPQKPSPDHPSPTSGSPPS-DSPHRVGSSSES 214


>TC15560 similar to SP|Q03173|NDPP_MOUSE NPC derived proline rich protein 1
           (NDPP-1). {Mus musculus;}, partial (8%)
          Length = 1134

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 39/182 (21%), Positives = 63/182 (34%), Gaps = 5/182 (2%)
 Frame = +3

Query: 77  NFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKA----DVLVSTH 132
           + PP     +P P      SH          PP   P Q     P PK+        + H
Sbjct: 180 SLPPPSPPPLPPPQAPPLPSHLPSPEPSSTMPPSTPPPQPTKPCPLPKSTPSQPPSSAPH 359

Query: 133 SEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERLSALLV 192
             P+S  L  SP  P   P      A  + +       ++++ T AS  T+   L     
Sbjct: 360 RVPTSSSL-ASPTSPSSGPHSTTMAAPFSSTRTSTPSPNSNNPTPASKPTTFSSLQK*AS 536

Query: 193 EDPLSIFQSFFDGTLDLESPPRQAETTETAQSGGVADDSQI-EEAFVQLKGLVFDAGFIS 251
               S+ +         +SPP  A+    + S   + +S I +  F +  G  F +   +
Sbjct: 537 TLSFSLRRE--------QSPPEIADPFRISSSRNASSESTICQTTFTKSHGT*FSSTGRA 692

Query: 252 GV 253
           G+
Sbjct: 693 GI 698


>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
           (68%)
          Length = 1097

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 39/180 (21%), Positives = 58/180 (31%), Gaps = 8/180 (4%)
 Frame = +1

Query: 17  PPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECRDNL- 75
           PP   SS SS+   S SS  + +S                +   P C P  +        
Sbjct: 289 PPTPKSSHSSTPPPSRSSSTTPKS------------KNATSLTAPSCPPPASPAATAPAP 432

Query: 76  SNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEP 135
           S  PP    N   P+  ++   +    S    PP      +     P   +   ST    
Sbjct: 433 SKTPPNPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSA 612

Query: 136 SSRQLQTSPQQPQPSPQQPRQGARVALSSP-------HAKGGSASSKTAASSHTSGERLS 188
             R   +S   P  +P++P    +   SSP       H    SAS K++ +   S    S
Sbjct: 613 PPRSTSSSSSSPINTPRKPSSATKAPASSPPGSELSLHHSPPSASRKSSTTPKISSSEPS 792



 Score = 28.9 bits (63), Expect = 1.7
 Identities = 39/168 (23%), Positives = 59/168 (34%), Gaps = 23/168 (13%)
 Frame = +1

Query: 13  SSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECR 72
           SS PPP   SS++   ++++S    +   P     T    SK     +P         C+
Sbjct: 313 SSTPPPSRSSSTTPKSKNATSLTAPSCPPPASPAATAPAPSKTPP--NPPTNSSKPSSCK 486

Query: 73  DNLSNFPPQDMQNMP-SPARE--ENVSHDEVQGSEGQEPPIIQPDQVIG----------- 118
            +L N  P  + + P SP        S  E Q      PP   P                
Sbjct: 487 SSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSAPPRSTSSSSSSPINTPRK 666

Query: 119 --------LMPPPKADVLVSTHSEPS-SRQLQTSPQQPQPSPQQPRQG 157
                      PP +++ +  HS PS SR+  T+P+     P   R+G
Sbjct: 667 PSSATKAPASSPPGSELSLH-HSPPSASRKSSTTPKISSSEPSHSRRG 807



 Score = 26.6 bits (57), Expect = 8.4
 Identities = 36/182 (19%), Positives = 59/182 (31%), Gaps = 5/182 (2%)
 Frame = +1

Query: 13  SSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECR 72
           SS+P   A ++S++   ++SS   S  + P         +S+P     P   P       
Sbjct: 160 SSEPCTTATTTSTTKAATNSSPPESRSTTPP--------SSEPTCLLAPASPPT------ 297

Query: 73  DNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMP-----PPKADV 127
                 P     + P P+R  + +      +    P    P       P     PP    
Sbjct: 298 ------PKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCPPPASPAATAPAPSKTPPNPPT 459

Query: 128 LVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERL 187
             S  S   S    T+P     +P  P        SSP  +   AS+  +A   ++    
Sbjct: 460 NSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSAPPRSTSSSS 639

Query: 188 SA 189
           S+
Sbjct: 640 SS 645


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.310    0.126    0.342 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,664,474
Number of Sequences: 28460
Number of extensions: 118779
Number of successful extensions: 1877
Number of sequences better than 10.0: 149
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of query: 426
length of database: 4,897,600
effective HSP length: 93
effective length of query: 333
effective length of database: 2,250,820
effective search space: 749523060
effective search space used: 749523060
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)


Lotus: description of TM0224.12