TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0221.5
         (190 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP063282                                                               31  0.12
TC8124 weakly similar to UP|IF5Z_ARATH (Q9S825) Probable eukaryo...    31  0.12
TC9622 weakly similar to UP|AAQ54501 (AAQ54501) Glucosyltransfer...    29  0.45

>BP063282 
          Length = 519

 Score = 31.2 bits (69), Expect = 0.12
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 142 LCTLLILRSLNVNKDPFRP*E 162
           LCT +++RSLNVN+ PF P E
Sbjct: 177 LCTSIVVRSLNVNQGPFIPQE 115


>TC8124 weakly similar to UP|IF5Z_ARATH (Q9S825) Probable eukaryotic
           translation initiation factor 5-2 (eIF-5 2), partial
           (5%)
          Length = 884

 Score = 31.2 bits (69), Expect = 0.12
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 142 LCTLLILRSLNVNKDPFRP*E 162
           LCT +++RSLNVN+ PF P E
Sbjct: 718 LCTSIVVRSLNVNQGPFIPQE 780


>TC9622 weakly similar to UP|AAQ54501 (AAQ54501) Glucosyltransferase
           (Fragment), partial (84%)
          Length = 584

 Score = 29.3 bits (64), Expect = 0.45
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 115 LKDEVFMYQRTYITKVLKGFYMDKSCPLCTLLILRSLNVNK 155
           L + V +Y+R +  ++LKG+ M  S PL   +++ + N NK
Sbjct: 562 LLNGVIIYRR*FYIELLKGYMMKNSMPLIA*ILIDNNNNNK 440


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.359    0.163    0.534 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,837,486
Number of Sequences: 28460
Number of extensions: 31860
Number of successful extensions: 369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of query: 190
length of database: 4,897,600
effective HSP length: 85
effective length of query: 105
effective length of database: 2,478,500
effective search space: 260242500
effective search space used: 260242500
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 52 (24.6 bits)