
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0195b.3
(495 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP035488 375 e-105
CB826792 110 7e-25
AV422239 76 1e-14
AV766731 66 1e-11
TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, ... 60 6e-10
BP040806 58 3e-09
AV772727 57 7e-09
AV771187 56 1e-08
AV429083 54 6e-08
BP041405 51 5e-07
TC13348 weakly similar to UP|Q9LUJ4 (Q9LUJ4) Gb|AAF26800.1, part... 50 1e-06
BI418759 48 4e-06
BP042107 47 9e-06
AV421658 45 4e-05
AV779633 44 8e-05
AV767495 43 1e-04
AV413186 41 4e-04
TC13232 41 5e-04
TC15507 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61... 40 7e-04
BP042555 40 0.001
>BP035488
Length = 534
Score = 375 bits (963), Expect = e-105
Identities = 177/177 (100%), Positives = 177/177 (100%)
Frame = +3
Query: 198 KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT 257
KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT
Sbjct: 3 KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT 182
Query: 258 YATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD 317
YATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD
Sbjct: 183 YATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD 362
Query: 318 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL
Sbjct: 363 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 533
Score = 63.2 bits (152), Expect = 1e-10
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Frame = +3
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D+ N I++ C EA V++D+ C P++ TY + IK L K ++ +L
Sbjct: 66 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLF 245
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYM 407
M + +C P+ V +C++++L + VP LE M+ GC + YN +++
Sbjct: 246 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 425
Query: 408 KWDNQDGLRKTWDEMER--NGCGPDRRSYTIMIH 439
K + + + ++MER C P+ +Y+ +++
Sbjct: 426 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN 527
Score = 37.0 bits (84), Expect = 0.007
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
+N++L + N ++ W ++ + C PD +Y I + GK+ A++ FR M
Sbjct: 78 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMW 257
Query: 459 SKGMVAEP 466
++G +P
Sbjct: 258 NEGCNCKP 281
>CB826792
Length = 485
Score = 110 bits (274), Expect = 7e-25
Identities = 56/156 (35%), Positives = 91/156 (57%)
Frame = +3
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
V EA+ + Q M++ P+V TYNSLIK LCK R++++ E+ DM ++ + P T+
Sbjct: 21 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR--NITPTIRTF 194
Query: 368 SCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
L+ EEV +L++M GC + + Y +++R + +W D + K W+ M +G
Sbjct: 195 HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 374
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
DR SY ++IHG + NGK+K+A Y+ EM KG +
Sbjct: 375 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 482
Score = 48.1 bits (113), Expect = 3e-06
Identities = 35/163 (21%), Positives = 75/163 (45%)
Frame = +3
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
L + + V++A L + + + D+ T+N ++ C EAK V+ D+M P
Sbjct: 3 LAKGRLVKEAVNLLQTMEKN-NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 179
Query: 254 DLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
+ T+ F + L + ++ L R + C P + +I C +++ E +
Sbjct: 180 TIRTFHAFFRILRVEEEVFELLDKMREL-----GCYPTIETYIMLIRKFCRWRKLDEVFK 344
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
++ M+E G + ++Y LI L ++++ ++ +M+RK
Sbjct: 345 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 473
>AV422239
Length = 387
Score = 76.3 bits (186), Expect = 1e-14
Identities = 37/122 (30%), Positives = 77/122 (62%)
Frame = +2
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+YA T R + +++ L ++ +++ + + +M ++ G++N +TF ++R++A AHKV+EA
Sbjct: 5 NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNK-GMLNVETFCIVMRKYARAHKVDEA 181
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ F +++ + +L AF LL LC+ ++V A+ +F S F+ D+KT++++L
Sbjct: 182 VYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDLKTYSILLE 355
Query: 229 GW 230
GW
Sbjct: 356 GW 361
Score = 33.5 bits (75), Expect = 0.082
Identities = 23/89 (25%), Positives = 45/89 (49%)
Frame = +2
Query: 247 MASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
M +K ++ T+ ++ + K+ A+ F M + ++ N ++ ALC +
Sbjct: 98 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM--DKYEVPQNLAAFNGLLSALCKSR 271
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIK 335
V +A E+F MK R EP++ TY+ L++
Sbjct: 272 NVRKAQEIFDSMKGR-FEPDLKTYSILLE 355
>AV766731
Length = 576
Score = 65.9 bits (159), Expect = 1e-11
Identities = 52/180 (28%), Positives = 84/180 (45%), Gaps = 6/180 (3%)
Frame = -3
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+ V N +I+ LC +R+ A+E+ M E G ++ T NSL LCK ++K L
Sbjct: 553 PNTVKKNSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIAL 374
Query: 350 VEDMERKKGSCMPNAVTYS------CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
M+ K PN Y C + LK +E+ VL G +L+ Y +++
Sbjct: 373 F--MKVKDPKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLS---EGYNLNVMTYTVMI 209
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
Y K D + +ME NGC P+ ++ +I +E + A R FREM ++ ++
Sbjct: 208 NGYCKEGLLDEAQALLSKMEDNGCIPNAVNFQTIICALFEKNENDKAERLFREMIARDLL 29
Score = 50.4 bits (119), Expect = 6e-07
Identities = 37/164 (22%), Positives = 78/164 (47%)
Frame = -3
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L K R ++ D M + T ++L H +++AI++F +
Sbjct: 535 NSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIALFMKVKD 356
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
+ ++ + ++ LC+ ++ A+ +F E + ++ T+ V++NG+C G
Sbjct: 355 PKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSE-GYNLNVMTYTVMINGYCKEGLLD 179
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGM 281
EA+ + + + C P+ + T I AL +K + A +LFR M
Sbjct: 178 EAQALLSKMEDNGCIPNAVNFQTIICALFEKNENDKAERLFREM 47
>TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, partial
(12%)
Length = 350
Score = 60.5 bits (145), Expect = 6e-10
Identities = 37/117 (31%), Positives = 62/117 (52%)
Frame = +3
Query: 257 TYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQ 316
TY TFI K+GK+ +AL++ + M GC+ + N +I L K ++ E +
Sbjct: 6 TYDTFIWKFCKEGKISSALRVLKDMERNGCS--KTLQTYNSLILGLGSKGQIFEMYGLMD 179
Query: 317 DMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
+M+ERG P++ TYN++I LC+ + E L+ +M K PN ++ L+ S
Sbjct: 180 EMRERGICPDICTYNNVISCLCEGGKTEDATSLLHEMLDK--GISPNISSFKILIKS 344
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/117 (29%), Positives = 56/117 (46%)
Frame = +3
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGM 281
T++ + +C G A RV KD+ + C L TY + I L KG++ L M
Sbjct: 6 TYDTFIWKFCKEGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 185
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
G C PD+ N +I LC + +A + +M ++G PN++++ LIK C
Sbjct: 186 RERGI-C-PDICTYNNVISCLCEGGKTEDATSLLHEMLDKGISPNISSFKILIKSCC 350
Score = 49.7 bits (117), Expect = 1e-06
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +3
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP 362
C + ++ AL V +DM+ GC + TYNSLI L ++ ++Y L+++M R++G C P
Sbjct: 33 CKEGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM-RERGIC-P 206
Query: 363 NAVTY----SCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLR 404
+ TY SCL K E+ +L M G S + + ++++
Sbjct: 207 DICTYNNVISCLCEGGK-TEDATSLLHEMLDKGISPNISSFKILIK 341
Score = 30.8 bits (68), Expect = 0.53
Identities = 17/54 (31%), Positives = 27/54 (49%)
Frame = +3
Query: 421 EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+MERNGC ++Y +I G G++ + EM +G+ + T VIS
Sbjct: 75 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGICPDICTYNNVIS 236
Score = 30.0 bits (66), Expect = 0.90
Identities = 20/86 (23%), Positives = 38/86 (43%)
Frame = +3
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKL 277
+ ++T+N ++ G G E + ++ PD+ TY I L + GK A L
Sbjct: 99 KTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGICPDICTYNNVISCLCEGGKTEDATSL 278
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALC 303
M ++G + P++ +I + C
Sbjct: 279 LHEMLDKGIS--PNISSFKILIKSCC 350
Score = 26.6 bits (57), Expect = 10.0
Identities = 14/81 (17%), Positives = 38/81 (46%)
Frame = +3
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+++L+ + ++ E + + G+ D+ + ++ LC EDA +L H +
Sbjct: 111 TYNSLILGLGSKGQIFEMYGLMDEMRERGICPDICTYNNVISCLCEGGKTEDATSLLH-E 287
Query: 211 AREFQLHRDIKTWNVILNGWC 231
+ + +I ++ +++ C
Sbjct: 288 MLDKGISPNISSFKILIKSCC 350
>BP040806
Length = 534
Score = 58.2 bits (139), Expect = 3e-09
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +1
Query: 257 TYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQ 316
TY L K G+ A +LF M EGC+ P+ ++ A C + EA +
Sbjct: 94 TYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETY--TALLAAYCRSNLLDEAFSILN 267
Query: 317 DMKERG-CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN 372
+MK C+P+V TY++LIK + + V L EDM + S MPN VT + +L+
Sbjct: 268 EMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR--SIMPNTVTQNIVLS 432
Score = 47.0 bits (110), Expect = 7e-06
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = +1
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVV 293
G H A++++ ++ C P TY + A + L A + M N C+PDV
Sbjct: 130 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPL-CQPDVF 306
Query: 294 ICNCIIDAL--CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ +I FK + E L ++DM R PN T N ++ K + +++ +++
Sbjct: 307 TYSTLIKPCVDAFKFDLVELL--YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 480
Query: 352 DMERKKGSCMPNAVTYSCL 370
M + SC P+ T + +
Sbjct: 481 SM-LESTSCKPDVWTMNTI 534
Score = 41.6 bits (96), Expect = 3e-04
Identities = 39/178 (21%), Positives = 78/178 (42%), Gaps = 2/178 (1%)
Frame = +1
Query: 85 DVLRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE 144
D LRR + P + F+ + Y P ++ +LGK + Q+F M
Sbjct: 10 DALRRSMAS-SPEV--FDMLKEHSFYEPKEGTYMKLXVLLGKSGQPHRARQLFTTMIEEG 180
Query: 145 GLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGL-DLDLDAFRTLLMWLCRYKHVEDA 203
+ +T++ LL + ++ ++EA S+ + L D+ + TL+ +
Sbjct: 181 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 360
Query: 204 ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMAS-KCRPDLFTYAT 260
E L+ A + + T N++L+G+ G + ++V ++ S C+PD++T T
Sbjct: 361 ELLYEDMAARSIMPNTV-TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 531
Score = 37.0 bits (84), Expect = 0.007
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +1
Query: 221 KTWNVILNGWCVLGNAHEAKRVWKDIMASK-CRPDLFTYATFIKALTKKGKLGTALKLFR 279
+T+ +L +C EA + ++ C+PD+FTY+T IK K L+
Sbjct: 196 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 375
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATYNSL 333
M + P+ V N ++ + + +V M E C+P+V T N++
Sbjct: 376 DM--AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 534
>AV772727
Length = 528
Score = 57.0 bits (136), Expect = 7e-09
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = -2
Query: 255 LFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+ TY + + AL K + A+ L + ++G +PD+ N IID LC RV +A E+
Sbjct: 527 VITYHSLLDALCKNHHVDKAIALLERVKDKGI--QPDMYTYNIIIDGLCKSGRVKDAQEL 354
Query: 315 FQDMKERGCEPNVATYNSLIKHLC 338
FQD+ +G NV TYN +I LC
Sbjct: 353 FQDLLIKGYRLNVVTYNIMINGLC 282
Score = 55.8 bits (133), Expect = 2e-08
Identities = 28/83 (33%), Positives = 50/83 (59%)
Frame = -2
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V+ + ++DALC V +A+ + + +K++G +P++ TYN +I LCK R++ EL +
Sbjct: 527 VITYHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQ 348
Query: 352 DMERKKGSCMPNAVTYSCLLNSL 374
D+ K N VTY+ ++N L
Sbjct: 347 DLLIK--GYRLNVVTYNIMINGL 285
Score = 47.0 bits (110), Expect = 7e-06
Identities = 26/91 (28%), Positives = 49/91 (53%)
Frame = -2
Query: 187 FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
+ +LL LC+ HV+ A L + ++ + D+ T+N+I++G C G +A+ +++D+
Sbjct: 518 YHSLLDALCKNHHVDKAIALLE-RVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDL 342
Query: 247 MASKCRPDLFTYATFIKALTKKGKLGTALKL 277
+ R ++ TY I L +G AL L
Sbjct: 341 LIKGYRLNVVTYNIMINGLCIEGLSDEALAL 249
Score = 40.0 bits (92), Expect = 9e-04
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = -2
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGM 281
T++ +L+ C + +A + + + +PD++TY I L K G++ A +LF+ +
Sbjct: 521 TYHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDL 342
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEAL 312
+G + +VV N +I+ LC + EAL
Sbjct: 341 LIKG--YRLNVVTYNIMINGLCIEGLSDEAL 255
>AV771187
Length = 484
Score = 56.2 bits (134), Expect = 1e-08
Identities = 24/68 (35%), Positives = 47/68 (68%)
Frame = -3
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
R+ ALE+F+DMK++GC PN TY+SLI++ +++ E++ DM+R +P++ +
Sbjct: 239 RIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSS 63
Query: 367 YSCLLNSL 374
Y+ ++++L
Sbjct: 62 YTPIIHAL 39
Score = 35.8 bits (81), Expect = 0.016
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = -3
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNL 401
R+++ EL EDM++K C PN VTY L+ E+ +E
Sbjct: 239 RIQRALELFEDMKKK--GCAPNRVTYDSLIRYYSATNEIDRAVE---------------- 114
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCG-PDRRSYTIMIHGHYENGKMKDAMRY 453
VLR +M+R G P SYT +IH E G++ +A +
Sbjct: 113 VLR----------------DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 3
Score = 33.1 bits (74), Expect = 0.11
Identities = 28/86 (32%), Positives = 37/86 (42%), Gaps = 11/86 (12%)
Frame = -2
Query: 251 CRPDLFTYATFIKALTKKG-----------KLGTALKLFRGMWNEGCNCKPDVVICNCII 299
C PD FTY I + + G +L A +LFR M +G PDVV +I
Sbjct: 435 CPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG--FVPDVVTYMPLI 262
Query: 300 DALCFKKRVPEALEVFQDMKERGCEP 325
D C PE+ V +E+G P
Sbjct: 261 DGCCKTLSYPESS*VV*GYEEKGVCP 184
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/59 (33%), Positives = 29/59 (48%), Gaps = 13/59 (22%)
Frame = -2
Query: 420 DEMERNG--CGPDRRSYTIMIHGHYENG-----------KMKDAMRYFREMTSKGMVAE 465
D+ME G C PD +YTI+I + +G ++ +A R FR M KG V +
Sbjct: 462 DQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 286
Score = 27.7 bits (60), Expect = 4.5
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -3
Query: 419 WDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+++M++ GC P+R +Y +I + ++ A+ R+M
Sbjct: 215 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 99
>AV429083
Length = 316
Score = 53.9 bits (128), Expect = 6e-08
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +3
Query: 247 MASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
+ + +PD+ T+ + AL KKGK+ A + M +G PD+V + ++D C K
Sbjct: 21 LKNNIKPDVSTFNILVDALCKKGKVKHAKNVLAVMIKQGV--APDLVTYSTLLDGYCLTK 194
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+ + V M G PNV +YN +I CK++ +++
Sbjct: 195 DMYKGKYVLNAMGRVGVTPNVDSYNIVINGFCKVKLVDE 311
Score = 50.8 bits (120), Expect = 5e-07
Identities = 29/86 (33%), Positives = 46/86 (52%)
Frame = +3
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
N KPDV N ++DALC K +V A V M ++G P++ TY++L+ C + M K
Sbjct: 30 NIKPDVSTFNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGYCLTKDMYKG 209
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLN 372
++ M R PN +Y+ ++N
Sbjct: 210 KYVLNAMGRV--GVTPNVDSYNIVIN 281
>BP041405
Length = 546
Score = 50.8 bits (120), Expect = 5e-07
Identities = 39/164 (23%), Positives = 71/164 (42%)
Frame = +3
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGM 281
T N +LN G +++ + P+ +TYA +KAL +KG + + +F+ M
Sbjct: 18 TCNFLLNRLVGHGKVEMVLAIYEQLKRLGLSPNHYTYAIVMKALYRKGDV---VHVFQEM 188
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
E PD +I+ LC R + Q+ ++ V Y ++I C
Sbjct: 189 --EEAGVTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFCNEM 362
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE 385
++++ +V DMER+ +P+ YS L+ +P L+
Sbjct: 363 KLDEAESVVLDMERQ--GLVPDVNIYSALICGYCKSHNLPRALD 488
Score = 46.2 bits (108), Expect = 1e-05
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
Frame = +3
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
CN +++ L +V L +++ +K G PN TY ++K L + + V++ E
Sbjct: 21 CNFLLNRLVGHGKVEMVLAIYEQLKRLGLSPNHYTYAIVMKALYRKGDVVHVFQ-----E 185
Query: 355 RKKGSCMPNAVTYSCLLNSL-KGPEEVPGV--LERMERNGCSLSDDIYNLVLRLYMKWDN 411
++ P++ + L+ L K G L+ + + Y V+ +
Sbjct: 186 MEEAGVTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFCNEMK 365
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D +MER G PD Y+ +I G+ ++ + A+ + +M SKG+
Sbjct: 366 LDEAESVVLDMERQGLVPDVNIYSALICGYCKSHNLPRALDLYADMISKGI 518
Score = 45.4 bits (106), Expect = 2e-05
Identities = 38/174 (21%), Positives = 77/174 (43%), Gaps = 2/174 (1%)
Frame = +3
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
CN +L+ L + E + +++++ N T++ +++ A ++ + + +F E
Sbjct: 21 CNFLLNRLVGHGKVEMVLAIYEQLKRLGLSPNHYTYAIVMK---ALYRKGDVVHVFQEME 191
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ G+ D L+ LC+ H D F + R+ ++ + +++G+C
Sbjct: 192 EAGVTPDSYCNAVLIEGLCK-NHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFCNEMKL 368
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMWNEG--CNC 288
EA+ V D+ PD+ Y+ I K L AL L+ M ++G NC
Sbjct: 369 DEAESVVLDMERQGLVPDVNIYSALICGYCKSHNLPRALDLYADMISKGIKTNC 530
Score = 38.1 bits (87), Expect = 0.003
Identities = 32/137 (23%), Positives = 59/137 (42%)
Frame = +3
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERME 388
T N L+ L ++E V + E ++R S PN TY+ ++ +L +V V + ME
Sbjct: 18 TCNFLLNRLVGHGKVEMVLAIYEQLKRLGLS--PNHYTYAIVMKALYRKGDVVHVFQEME 191
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
G + +++ K D + E + + +YT +IHG K+
Sbjct: 192 EAGVTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFCNEMKLD 371
Query: 449 DAMRYFREMTSKGMVAE 465
+A +M +G+V +
Sbjct: 372 EAESVVLDMERQGLVPD 422
>TC13348 weakly similar to UP|Q9LUJ4 (Q9LUJ4) Gb|AAF26800.1, partial (7%)
Length = 539
Score = 49.7 bits (117), Expect = 1e-06
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
DVV N +I C R AL + ++M+ER C P++ TY+ L+K CK +RM+ + LV
Sbjct: 33 DVVTYNTMISTACAHSREETALRLLKEMEERSCTPDLETYHPLLKMCCKKKRMKVLKFLV 212
Score = 40.0 bits (92), Expect = 9e-04
Identities = 21/56 (37%), Positives = 32/56 (56%)
Frame = +3
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+DM ++G +V TYN++I C R E L+++ME + SC P+ TY LL
Sbjct: 3 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER--SCTPDLETYHPLL 164
Score = 37.4 bits (85), Expect = 0.006
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKL 271
RD+ T+N +++ C A R+ K++ C PDL TY +K KK ++
Sbjct: 30 RDVVTYNTMISTACAHSREETALRLLKEMEERSCTPDLETYHPLLKMCCKKKRM 191
>BI418759
Length = 543
Score = 47.8 bits (112), Expect = 4e-06
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Frame = +2
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSHRE-----GLVNEDTFSTLLRRFAAAHKVEE 167
T CN +L++L K + + +FD+M VN DTF+ ++ K E
Sbjct: 110 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 289
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A++ F A T +SKA D+ +N I+
Sbjct: 290 ALATF----------------------------RKAGTKSNSKA----FAMDVAGYNNII 373
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGM 281
+ +C G EA+ +++++ + PD+ T+ T I A K ++ ALK+F M
Sbjct: 374 SRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 535
Score = 36.2 bits (82), Expect = 0.013
Identities = 28/101 (27%), Positives = 46/101 (44%), Gaps = 4/101 (3%)
Frame = +2
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDI----MASKCRPDLFTYATFIKALTKKGKLGTALKL 277
T+N+++N LG HEA ++ + D+ Y I + G L A L
Sbjct: 239 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 418
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
F + ++ + PDV +IDA +R+ +AL+VF M
Sbjct: 419 FEELCSKSLS--PDVPTHRTLIDAYMKMERIDDALKVFHRM 535
>BP042107
Length = 515
Score = 46.6 bits (109), Expect = 9e-06
Identities = 26/104 (25%), Positives = 50/104 (48%)
Frame = +1
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVI 294
N +A + ++ P + ++ + +L K TA+ L M +G +PD+V
Sbjct: 196 NVDDAVSFFNRMLQMHPTPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGI--RPDIVT 369
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
+ +I+ C ++ A V ++ +RG +PN N+L+K LC
Sbjct: 370 SSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC 501
>AV421658
Length = 281
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +1
Query: 318 MKERGCEPNVATYNSLIKHLCKIRR--MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL- 374
M ER P+V TYN+LI CK++ +EK +E+ +M K +P+A TY L+ +L
Sbjct: 7 MTERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHK--GILPDADTYEPLIRTLC 180
Query: 375 --KGPEEVPGVLERMERNGCSLSDDIY 399
+ E + M R G S +++ Y
Sbjct: 181 LQQRLSEAYDLFREMLRWGVSPNNETY 261
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 PDLFTYATFIKALTK--KGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPE 310
PD+ TY T I K + L A ++ M ++G PD +I LC ++R+ E
Sbjct: 28 PDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGI--LPDADTYEPLIRTLCLQQRLSE 201
Query: 311 ALEVFQDMKERGCEPNVATYNSLI 334
A ++F++M G PN TY L+
Sbjct: 202 AYDLFREMLRWGVSPNNETYTGLM 273
>AV779633
Length = 440
Score = 43.5 bits (101), Expect = 8e-05
Identities = 33/123 (26%), Positives = 60/123 (47%), Gaps = 22/123 (17%)
Frame = -2
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK---IRRMEKVY 347
DV+ N +ID C + +AL + ++ + G +P++ +YNSL+K CK + R E ++
Sbjct: 418 DVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRAESLF 239
Query: 348 ELVEDMER--KKGSCMPNAV--------------TYSCLLNSLK---GPEEVPGVLERME 388
+ + +R + G NAV TY+ L+++ G EE + E+M
Sbjct: 238 DEILGFQRDGESGQLKNNAVDTRDELRNIRPTLATYTTLISAYGKHCGIEESRSLYEQMV 59
Query: 389 RNG 391
+G
Sbjct: 58 MSG 50
Score = 36.2 bits (82), Expect = 0.013
Identities = 33/140 (23%), Positives = 58/140 (40%), Gaps = 9/140 (6%)
Frame = -2
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKL 277
RD+ N +++G+C G +A + ++ + +PD+ +Y + +K K G L A L
Sbjct: 421 RDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRAESL 242
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-----RGCEPNVATYNS 332
F D + +R E+ ++ + + R P +ATY +
Sbjct: 241 F---------------------DEILGFQRDGESGQLKNNAVDTRDELRNIRPTLATYTT 125
Query: 333 LI----KHLCKIRRMEKVYE 348
LI KH C I +YE
Sbjct: 124 LISAYGKH-CGIEESRSLYE 68
>AV767495
Length = 586
Score = 42.7 bits (99), Expect = 1e-04
Identities = 21/54 (38%), Positives = 31/54 (56%)
Frame = +2
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
DVV + +IDALC V ++ + M E+G PNV TYNS+I ++ +E
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALE 187
>AV413186
Length = 398
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/109 (30%), Positives = 53/109 (48%)
Frame = +1
Query: 266 TKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP 325
+K G L TA ++F + N K DVV+ N +I AL EA+ + DM G EP
Sbjct: 13 SKCGSLETAWRVFNLVGN-----KQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEP 177
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
N AT+ L+ +++ + + M + G +P+ Y+CL + L
Sbjct: 178 NRATFVVLLNACSLSGLVQEGLQFFKFMTSEFG-VVPDQEHYACLTDLL 321
Score = 29.6 bits (65), Expect = 1.2
Identities = 10/41 (24%), Positives = 29/41 (70%)
Frame = +1
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
++M R+G P+R ++ ++++ +G +++ +++F+ MTS+
Sbjct: 148 NDMIRSGVEPNRATFVVLLNACSLSGLVQEGLQFFKFMTSE 270
>TC13232
Length = 551
Score = 40.8 bits (94), Expect = 5e-04
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
GC + Y+++LR++ + D WD+M G P + ++I K+ A
Sbjct: 10 GCEPTVSTYDIILRMFCDEERLDMAMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 189
Query: 451 MRYFREMTSKGM 462
+YF++M G+
Sbjct: 190 CKYFQQMLDVGI 225
Score = 32.0 bits (71), Expect = 0.24
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 320 ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
E GCEP V+TY+ +++ C R++ + + M + +P + L+++L
Sbjct: 4 EMGCEPTVSTYDIILRMFCDEERLDMAMAVWDQMRAR--GILPGMHVFFVLISAL 162
>TC15507 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61870
{Arabidopsis thaliana;}, partial (24%)
Length = 746
Score = 40.4 bits (93), Expect = 7e-04
Identities = 32/114 (28%), Positives = 49/114 (42%)
Frame = +3
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
EA +VF DMK+RG +P Y +L LC+ E +E+ ++ K +PN T
Sbjct: 96 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK--GWVPNFTTMKK 269
Query: 370 LLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
L+ L G S +DD L+ ++ K+ WDE+E
Sbjct: 270 LVTGLV---------------GVSQTDDAKELIKQVKEKFTESS---DKWDEIE 377
>BP042555
Length = 510
Score = 39.7 bits (91), Expect = 0.001
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
+V +A + + M RG P+VATYN LI C++ R ++ ++ DM ++ S P+ T
Sbjct: 228 QVDKAHNMLKYMIVRGFSPSVATYNELIHGYCRVDRFKEAVGILRDMAKRGXS--PDVDT 401
Query: 367 YSCLL 371
Y L+
Sbjct: 402 YYPLI 416
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/66 (28%), Positives = 35/66 (52%)
Frame = +3
Query: 220 IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFR 279
+ T+N +++G+C + EA + +D+ PD+ TY I + GKLG A ++
Sbjct: 288 VATYNELIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPLICGFCQTGKLGKAFEMKA 467
Query: 280 GMWNEG 285
M ++G
Sbjct: 468 KMVHKG 485
Score = 32.0 bits (71), Expect = 0.24
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +3
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
++ +L+ M G S S YN ++ Y + D +M + G PD +Y +
Sbjct: 234 DKAHNMLKYMIVRGFSPSVATYNELIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPL 413
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
I G + GK+ A +M KG++ + T
Sbjct: 414 ICGFCQTGKLGKAFEMKAKMVHKGILPDADT 506
Score = 29.3 bits (64), Expect = 1.5
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
++P+ NE++ ++ RF+E + +M+ R + DT+ L+ F K+ +A
Sbjct: 276 FSPSVATYNELIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPLICGFCQTGKLGKAF 455
Query: 170 SMFYTREQFGLDLDLDAF 187
M G+ D D +
Sbjct: 456 EMKAKMVHKGILPDADTY 509
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,027,347
Number of Sequences: 28460
Number of extensions: 134642
Number of successful extensions: 943
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of query: 495
length of database: 4,897,600
effective HSP length: 94
effective length of query: 401
effective length of database: 2,222,360
effective search space: 891166360
effective search space used: 891166360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0195b.3