TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0192.12
         (60 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8228 similar to UP|GPX4_CITSI (Q06652) Probable phospholipid h...   104  3e-24
TC8743 similar to UP|Q8W259 (Q8W259) Phospholipid hydroperoxide ...    88  3e-19
BG662108                                                               77  7e-16
BP048453                                                               50  1e-07

>TC8228 similar to UP|GPX4_CITSI (Q06652) Probable phospholipid
           hydroperoxide glutathione peroxidase  (PHGPx)
           (Salt-associated protein) , partial (95%)
          Length = 883

 Score =  104 bits (260), Expect = 3e-24
 Identities = 51/60 (85%), Positives = 52/60 (86%)
 Frame = +2

Query: 1   GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
           G TNSNYTELS LYEKYK KGLEIL F CNQF AQEPGD+EQIQEFV TRFK EFPVFDK
Sbjct: 293 GLTNSNYTELSQLYEKYKSKGLEILGFPCNQFGAQEPGDNEQIQEFVCTRFKAEFPVFDK 472


>TC8743 similar to UP|Q8W259 (Q8W259) Phospholipid hydroperoxide
           glutathione peroxidase  , complete
          Length = 680

 Score = 88.2 bits (217), Expect = 3e-19
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = +1

Query: 1   GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
           G T +NY EL+ LYEKYK KGLEILAF CNQF  QEPG +++IQ+ V TRFK EFPVFDK
Sbjct: 250 GLTQTNYKELNILYEKYKSKGLEILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDK 429


>BG662108 
          Length = 410

 Score = 77.0 bits (188), Expect = 7e-16
 Identities = 34/60 (56%), Positives = 45/60 (74%)
 Frame = +2

Query: 1   GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
           GF  +NYT+L+ LY +YK  GLEILAF CNQF  +EPG S++ Q+FV TR+K  +P+F K
Sbjct: 215 GFAEANYTQLTQLYTRYKGSGLEILAFPCNQFLRKEPGTSQEAQDFVCTRYKAVYPIFGK 394


>BP048453 
          Length = 527

 Score = 49.7 bits (117), Expect = 1e-07
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = -2

Query: 21  GLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
           GLEILAF CN F   EPG  ++ + F  TRFK E+P+F K
Sbjct: 526 GLEILAFPCNPFLKPEPGTGQEAEPFACTRFKAEYPLFGK 407


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.337    0.151    0.469 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 828,007
Number of Sequences: 28460
Number of extensions: 6265
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of query: 60
length of database: 4,897,600
effective HSP length: 36
effective length of query: 24
effective length of database: 3,873,040
effective search space: 92952960
effective search space used: 92952960
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 49 (23.5 bits)