TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0180a.12
         (1023 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC16610 similar to UP|O49541 (O49541) Oxoglutarate dehydrogenase...   612  e-176
TC14414 similar to UP|Q84VW8 (Q84VW8) At3g55410, partial (12%)        233  1e-61
TC18068 homologue to UP|O49541 (O49541) Oxoglutarate dehydrogena...   184  6e-47
BP074116                                                               30  1.9
CB829288                                                               30  2.5
AV422795                                                               28  7.4
TC8712 homologue to UP|O81413 (O81413) Ferric leghemoglobin redu...    28  9.7
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu...    28  9.7

>TC16610 similar to UP|O49541 (O49541) Oxoglutarate dehydrogenase - like
           protein , partial (33%)
          Length = 968

 Score =  612 bits (1578), Expect = e-176
 Identities = 290/321 (90%), Positives = 310/321 (96%)
 Frame = +2

Query: 453 TDVAKALNAPIFHVNGDDVESVVHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSF 512
           TDVAKAL  PIFHVNGDDVE+VVH CELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSF
Sbjct: 5   TDVAKALECPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSF 184

Query: 513 TQPKMYKVIRNHPSALEIYQKKLLELGELTQEDIDKIHKKVTSILNDEFLASKDYIPKRR 572
           TQPKMYKVIR+HPSALEIYQKKLLE GEL +EDIDKIH KVTSILN+EFLASK+YIPKRR
Sbjct: 185 TQPKMYKVIRSHPSALEIYQKKLLESGELAKEDIDKIHNKVTSILNEEFLASKEYIPKRR 364

Query: 573 DWLSAYWSGFKSPEQLSRIRNTGVKPDILKNVGKAITALPESLNPHRAVKKVYEQRAQMV 632
           DWLSAYW+GFKSPEQLSRIRNTGVKP+ILKNVGKAIT +P++  PH+AVK++Y+QRAQM+
Sbjct: 365 DWLSAYWTGFKSPEQLSRIRNTGVKPEILKNVGKAITTIPDNFTPHKAVKRIYDQRAQMI 544

Query: 633 ETGEDIDWGFAEALAFATLIVEGNHVRLSGQDVERGTFSHRHAVVHDQATGEKYCPLDHV 692
           ETGEDIDWGFAEALAFATL+VEGNHVRLSGQDVERGTFSHRHAVVHDQ TG+KYCPLDHV
Sbjct: 545 ETGEDIDWGFAEALAFATLLVEGNHVRLSGQDVERGTFSHRHAVVHDQTTGDKYCPLDHV 724

Query: 693 IMNQNEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVIFDNFLSS 752
           IMNQNEEMFTVSNSSLSEFGVLGFE+GYSMENPNSLVIWEAQFGDFANGA VIFDNFL+S
Sbjct: 725 IMNQNEEMFTVSNSSLSEFGVLGFEVGYSMENPNSLVIWEAQFGDFANGAHVIFDNFLAS 904

Query: 753 GESKWLRQTGLVVLLPHGYDG 773
           GESKWLRQTGLV+LLPHGYDG
Sbjct: 905 GESKWLRQTGLVMLLPHGYDG 967


>TC14414 similar to UP|Q84VW8 (Q84VW8) At3g55410, partial (12%)
          Length = 779

 Score =  233 bits (594), Expect = 1e-61
 Identities = 107/126 (84%), Positives = 118/126 (92%)
 Frame = +1

Query: 898  ILCSGKVYYELDEQRTKDDAKDVAICRVEQLCPFPYDLVQRELKRYPNAEVVWCQEEPMN 957
            +LCSGKVYYELD+ RTK D KDVAICRVEQLCPFPYDLV RELKRYPNAEVVWCQEEPMN
Sbjct: 1    VLCSGKVYYELDDHRTKVDGKDVAICRVEQLCPFPYDLVPRELKRYPNAEVVWCQEEPMN 180

Query: 958  MGGYSYILPRLITSMKALGRGGYEDVKYVGRAPSAATATGFLKVHQREQAELVHKAMQHK 1017
            MGGY+YILPRLI+SMKA+GRGGYEDVKYVGRAPSAATATGFLKVH +EQAE+  KA+Q +
Sbjct: 181  MGGYTYILPRLISSMKAVGRGGYEDVKYVGRAPSAATATGFLKVHPKEQAEIAEKALQRE 360

Query: 1018 PINFPY 1023
            P+NFP+
Sbjct: 361  PLNFPF 378


>TC18068 homologue to UP|O49541 (O49541) Oxoglutarate dehydrogenase - like
           protein , partial (7%)
          Length = 537

 Score =  184 bits (467), Expect = 6e-47
 Identities = 94/130 (72%), Positives = 105/130 (80%), Gaps = 8/130 (6%)
 Frame = -1

Query: 1   MAWFRAAALSIAKHAIRRNLFRGGSSYYVTRTTNLPST--------SRKLHTTIFKSEAH 52
           MAWFRA   ++AKHAIR+ L +GGSSY+V+R    PS+        SR   TT+FKS   
Sbjct: 387 MAWFRAGT-NLAKHAIRKTLSKGGSSYHVSRARVFPSSPLSGGGSGSRGFQTTVFKSREQ 211

Query: 53  AAPVPRPVPLSRLTDNFLDGTSSAYLEELQRAWEADPSSVDESWDNFFRNFVGQASTSPG 112
           AAPVPR VPLSRLTD+FLDGTSS YLEELQRAWEADP+SVDESWDNFFRNFVGQASTSPG
Sbjct: 210 AAPVPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQASTSPG 31

Query: 113 ISGQTIQESM 122
           +SGQTIQESM
Sbjct: 30  LSGQTIQESM 1


>BP074116 
          Length = 405

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 20/63 (31%), Positives = 33/63 (51%)
 Frame = +2

Query: 411 VYETLHLSALPNYTTGGTIHIVFNNQVAFTTDPESGRSSQYSTDVAKALNAPIFHVNGDD 470
           +Y +  +      TT   I+I+  +   FTTDP    SSQ+S +V K+L A +F  + D 
Sbjct: 2   IYYSYSILTTNQETTHTVIYIIGESAANFTTDPS---SSQFS-NVKKSLAAGLFQKSEDG 169

Query: 471 VES 473
            ++
Sbjct: 170 ADN 178


>CB829288 
          Length = 451

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -1

Query: 796 IIPEMDPT-----LRKQIQECNLQIVNVTTPANFFHVLRRQIHREFRKPLIVMSPKNLLR 850
           I+P + P      L  Q  E  + I N T P +F H   +    + +    V  P+N ++
Sbjct: 286 ILPRLMPMVPSYILHLQAAESTIPIPNPTNPIHFAHTQFKNTPFQLKIFTAVKPPQNPMK 107

Query: 851 SKVCRSNLS 859
           S  CR++ S
Sbjct: 106 SLPCRNHFS 80


>AV422795 
          Length = 419

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 16/54 (29%), Positives = 26/54 (47%)
 Frame = +1

Query: 41  KLHTTIFKSEAHAAPVPRPVPLSRLTDNFLDGTSSAYLEELQRAWEADPSSVDE 94
           K+H T+F    H  P+P   P   L+    D +       +++A+E+D SS  E
Sbjct: 52  KIHNTLFAQILHTLPLPLRNP--NLSPERPDSSLRRRSSSMEQAYESDSSSRSE 207


>TC8712 homologue to UP|O81413 (O81413) Ferric leghemoglobin reductase-2
           precursor , partial (60%)
          Length = 1230

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 15/45 (33%), Positives = 23/45 (50%)
 Frame = +1

Query: 765 VLLPHGYDGQGPEHSSGRLERYLQMADDHPYIIPEMDPTLRKQIQ 809
           +++  GY G       GRL   + + +  P I+P MD  +RKQ Q
Sbjct: 40  IVIGAGYIGLEMGSVWGRLGSEVTVVEFAPDIVPTMDAEIRKQFQ 174


>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
           partial (43%)
          Length = 1038

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 33  TNLPSTSRKLHTTIFKSEAHA-APVPRPVPLSRLTDNFLDGTSSAYLEELQRAWEADPSS 91
           T +P+TS        KS++ A AP P   P+  L+ +   G S + L        +D S 
Sbjct: 491 TPVPATSPAPAPAKVKSKSPAPAPAPALAPVVSLSPSEAPGPSLSSLSPALSPAASDDSG 670

Query: 92  VDESW 96
           V++SW
Sbjct: 671 VEKSW 685


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.319    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,074,868
Number of Sequences: 28460
Number of extensions: 231705
Number of successful extensions: 999
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of query: 1023
length of database: 4,897,600
effective HSP length: 99
effective length of query: 924
effective length of database: 2,080,060
effective search space: 1921975440
effective search space used: 1921975440
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)