BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0166.6
(766 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%) 44 7e-05
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 44 1e-04
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 43 2e-04
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 43 2e-04
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 43 2e-04
AV769326 42 5e-04
TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like arabinogalac... 42 5e-04
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 41 8e-04
BP044109 40 0.001
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 39 0.002
TC10315 similar to UP|P93166 (P93166) SCOF-1, partial (42%) 39 0.002
TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-... 39 0.003
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 39 0.003
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 39 0.003
AW719831 39 0.004
AV419448 39 0.004
BI420016 38 0.005
TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Ce... 38 0.005
BP078507 38 0.007
TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, p... 37 0.009
>TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%)
Length = 799
Score = 44.3 bits (103), Expect = 7e-05
Identities = 40/129 (31%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Frame = +1
Query: 307 PIPESQPAAQTTTP-PHSPRSS-------FFQPSPTEAPLWNLLQTQTSRSEDPTSLLTI 358
P P SQP T P HSP S PSP+ P + + +S PTS +
Sbjct: 43 PSPTSQPPYIATPPNTHSPTSQPPNTQTPANTPSPSSQPPY---LSTPPKSNSPTSQPPV 213
Query: 359 PYDPLPSEPIIHDQPEPNQTEPQPRTSDHS-APRASARPAARTTDTDSSTAFTPVSFPIN 417
P PI P P P T+ S AP S P A TP S P+
Sbjct: 214 AQTPRAVTPISSPSSSPTSNSPYPSTNPPSLAPSISTSP----------PALTPASTPVP 363
Query: 418 VIDSPPSNT 426
SPPS +
Sbjct: 364 ATASPPSQS 390
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 43.5 bits (101), Expect = 1e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = +1
Query: 311 SQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQ--------TSRSEDPTSLLTIPYDP 362
S P +++TTPP S + P+ P + T T +S++ TSL T P P
Sbjct: 220 SPPESRSTTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSL-TAPSCP 396
Query: 363 LPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVIDSP 422
P+ P P P++T P P T+ + T + SS +P + PI+ SP
Sbjct: 397 PPASPAA-TAPAPSKTPPNPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSSP 573
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 42.7 bits (99), Expect = 2e-04
Identities = 46/160 (28%), Positives = 63/160 (38%), Gaps = 23/160 (14%)
Frame = +1
Query: 293 PISALLQHSSNPLT-----PIPESQPA-------AQTTTPPHSPRSSFFQPSPTEAPLWN 340
P LL SS+ + P P QP TTTPP SP +P AP +
Sbjct: 22 PCGLLLHTSSSSSSSYSPPPPPSQQPTHSPSTSPTSTTTPPPSPTK--VTENPPTAPSTS 195
Query: 341 LLQTQTSRSEDP------TSLLTIPYDPLPSEPIIHDQPEPNQTEP-----QPRTSDHSA 389
+S SE+P TS P P+ P P P T+P P TS SA
Sbjct: 196 TKSPTSSASEEPSPPNPSTSTTQQPKHS-PTSPPASPSPSPPSTKPPTAMASPSTSPLSA 372
Query: 390 PRASARPAARTTDTDSSTAFTPVSFPINVIDSPPSNTSES 429
++ P A + +S+ P + + + SP S+T S
Sbjct: 373 TKSHPTPPAAPS---ASSTPPPTTTSLKTMSSPSSSTPSS 483
Score = 32.7 bits (73), Expect = 0.22
Identities = 28/94 (29%), Positives = 37/94 (38%)
Frame = +1
Query: 301 SSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPY 360
SS P P + + T P HSP S PSP+ P S S P S T +
Sbjct: 211 SSASEEPSPPNPSTSTTQQPKHSPTSPPASPSPS-PPSTKPPTAMASPSTSPLS-ATKSH 384
Query: 361 DPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASA 394
P+ P P P T + +S S+ +SA
Sbjct: 385 PTPPAAPSASSTPPPTTTSLKTMSSPSSSTPSSA 486
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/174 (25%), Positives = 65/174 (36%), Gaps = 9/174 (5%)
Frame = -3
Query: 300 HSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEA---------PLWNLLQTQTSRSE 350
H P P E+ + +PP P S QP P +A P Q RS
Sbjct: 657 HYPPPHRPYYENTLPSLPPSPPPPPHSRTSQPPPPQADTAAPGTPPPPELRRDRQKQRSS 478
Query: 351 DPTSLLTIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFT 410
+S P P P P P+PN+T + R + SAP P TT S+ T
Sbjct: 477 RTSSRTLSPRSPRPPSPSCSPPPKPNRTAKRRRLA--SAP--DPPPMMMTT---KSSPGT 319
Query: 411 PVSFPINVIDSPPSNTSESIRKFMEVRKEKVSALEEYYLTCPSPRQYPGPRPER 464
+S + S PS T E++R+ ++ E+ + P P+R
Sbjct: 318 VISAQTHESPSAPSPTEENLRRRR*SSPGSCTSFAEFSASSGEHSSTPSRSPQR 157
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 42.7 bits (99), Expect = 2e-04
Identities = 50/220 (22%), Positives = 77/220 (34%)
Frame = +1
Query: 184 LPPAPEFPSPPKKKTKRKMVLEESSEESDVPLVKKPKSKPADDDGDDSEDGPPKKKQKKV 243
+P P+ PSP + + + S P V P P+ ++ PPK
Sbjct: 28 IPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPS--- 198
Query: 244 RIVVKPTRVEPAAAEVRRTEAPARVTRSSAHTSKPALASDDDLNLFDALPISALLQHSSN 303
PT P +T +P +++ + P+ S PIS +
Sbjct: 199 -----PTSQPPYIPLPPKTPSP--ISQPPHVPTPPSTPS----------PISQPPYTPTP 327
Query: 304 PLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPL 363
P TP P SQP T TPP++P S QP T P P P
Sbjct: 328 PKTPSPTSQP-PHTPTPPNTP-SPISQPPYTPTP---------------------PKTPS 438
Query: 364 PSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDT 403
P+ H PN + P + + +P + P ++ +T
Sbjct: 439 PTNQPPHIPSPPNSSSPTSQPPNTPSPPKTPSPTSQPPNT 558
>AV769326
Length = 262
Score = 41.6 bits (96), Expect = 5e-04
Identities = 29/95 (30%), Positives = 41/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 305 LTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPLP 364
++ P PA T++P P ++ PSP P S +P S + P P
Sbjct: 2 ISSAPRCFPATTTSSPSSPPSTTPTTPSPPSDP--------HSPPSNPPSAASDPNSPSL 157
Query: 365 SEPIIHDQPE-PNQTEPQPRTSDHSAPRASARPAA 398
+ P + P P TEP +S SAP AS R +A
Sbjct: 158 TAPSLQKPPSSPTSTEPPSSSSTPSAPSASTRSSA 262
Score = 27.3 bits (59), Expect = 9.4
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 499 PDPEPEQSVSNQSSVRSPHPLVETSDPHRGTSEPNAPIINIGSPQVASEAHSSNHPASPK 558
P P + + S PH S+P S+PN+P + S Q + +S P S
Sbjct: 47 PSSPPSTTPTTPSPPSDPHS--PPSNPPSAASDPNSPSLTAPSLQKPPSSPTSTEPPSSS 220
Query: 559 TNLS 562
+ S
Sbjct: 221 STPS 232
>TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (69%)
Length = 1527
Score = 41.6 bits (96), Expect = 5e-04
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Frame = +2
Query: 301 SSNPLTPIPES----QPAAQTTTPPHSPRSSFFQPSP---TEAPLWNLLQTQTSRSEDPT 353
S +P +P + P++ +TTPP P S+ PSP T +P T +S + P
Sbjct: 203 SPSPTSPARSTTAKPSPSSPSTTPPCPPSSTSTSPSPP*KTSSP-----STSSSTTLAPK 367
Query: 354 SLLTIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVS 413
S P +P PS P P P P TS S A P TT + ST+ S
Sbjct: 368 SSTR*PTEP-PSSPPCSRPPAPPPEPPATSTSPTSKEAK*ASPLRTTTASTHSTSNQWKS 544
Query: 414 FPINVIDSPPSN 425
F + + S N
Sbjct: 545 FHTSSLFSKSLN 580
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/74 (29%), Positives = 26/74 (34%)
Frame = +3
Query: 321 PHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEPNQTEP 380
PHS + F + W SR LL + P P P DQP PN P
Sbjct: 84 PHSNHFTSFLHHRSRRRQWQPQHYPHSRQTP--RLLHLQPLPHPHPPRRRDQPPPNHHHP 257
Query: 381 QPRTSDHSAPRASA 394
+ R H P A
Sbjct: 258 RHRQRRHVLPPRQA 299
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 40.8 bits (94), Expect = 8e-04
Identities = 58/264 (21%), Positives = 96/264 (35%), Gaps = 11/264 (4%)
Frame = +2
Query: 249 PTRVEPAAAEVRRTEAPARVTRSSAHTSKPALASDDDLNLFDALPISALLQHSSNPLTPI 308
PT++ P + P R++R +S L P ++ S P +P
Sbjct: 122 PTQISPRQCSCSARQ-PWRLSRQRCSSSPWLLPPQT--------PTTSPAFSPSTPSSP- 271
Query: 309 PESQPAAQTTTPPHSPRSSFFQPSPTEAPLW-----NLLQTQTSRSEDPTSLLTIPYDPL 363
P + + T+PP S +P+ P W N Q+ SR+ P++ + P
Sbjct: 272 PSTTTSPSPTSPPRSTNGPQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPR 451
Query: 364 PSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVID--- 420
S P P Q +P + P +S P + +DS+ T P+ +
Sbjct: 452 SSTRSPTAPPSPPQC-TKPPAPPRAPPDSSTSPTSAAGKSDSAPRTTTAPSPLRSSNP*R 628
Query: 421 -SP-PSNTSESIRKFMEVRKEKVSALEEYYLTCPSPRQYP-GPRPERLVDPDEPILANPI 477
SP S +S S+R F P P+Q P P P + P P+ + +
Sbjct: 629 KSPTTSPSSRSVRFF------------------PPPQQKPLHPHPLSRISP--PLCPSTV 748
Query: 478 QEADPLVQQAHPVPDQQEPIQPDP 501
+ P + P ++ QP P
Sbjct: 749 ARSSPTLS-----PPRRTRTQPSP 805
>BP044109
Length = 497
Score = 40.4 bits (93), Expect = 0.001
Identities = 45/144 (31%), Positives = 56/144 (38%), Gaps = 9/144 (6%)
Frame = +2
Query: 263 EAPARVTRSSAHTSKPALASDDDLNLFDALPISALLQHSSNPLTP------IPESQPAAQ 316
+ P T S +H+S +L+S F P + N TP +S P Q
Sbjct: 32 QPPHTATTSLSHSSSTSLSSSH----FFPSPPPPPPPPNKNKTTPSHASNATSKSTPRTQ 199
Query: 317 T-TTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEP 375
T TTPP SP S SP P + TS E P+S P LPS P P
Sbjct: 200 TPTTPPPSPTS-----SPKPPPSTFATKPSTSPPETPSSSSHGPAPTLPSPP-SSSTPTS 361
Query: 376 NQTEPQPRTSD--HSAPRASARPA 397
+ P P S PRA+ PA
Sbjct: 362 TPSPPSPPNGSTLPSPPRATPTPA 433
Score = 33.5 bits (75), Expect = 0.13
Identities = 42/170 (24%), Positives = 55/170 (31%), Gaps = 1/170 (0%)
Frame = +2
Query: 186 PAPEFPSPPKKKTKRKMVLEESSEESDVPLVKKPKSKPADDDGDDSEDGPPKKKQKKVRI 245
P+P P PP K K ++ P + P + P S PP
Sbjct: 104 PSPPPPPPPPNKNKTTPSHASNATSKSTPRTQTPTTPP---PSPTSSPKPP--------- 247
Query: 246 VVKPTRVEPAAAEVRRTEAPARVTRSSAHTSKPALASDDDLNLFDALPISALLQHSSNPL 305
P+ + + +P SS+H P L S SS P
Sbjct: 248 --------PSTFATKPSTSPPETPSSSSHGPAPTLPSPPS---------------SSTPT 358
Query: 306 -TPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTS 354
TP P S P T P PR+ +PT AP + TS S TS
Sbjct: 359 STPSPPSPPNGSTL--PSPPRA-----TPTPAPSLPAARRMTSASLCSTS 487
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 39.3 bits (90), Expect = 0.002
Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 3/165 (1%)
Frame = +3
Query: 263 EAPARVTRSSAHTSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPH 322
+ PA ++ TS+P+ + P S+L Q SS+ PI + PPH
Sbjct: 15 QPPATAAATARSTSEPSQSQPP------LQPPSSLPQTSSSTTPPI---------SAPPH 149
Query: 323 SPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEPNQTEPQP 382
P++ P P P N +Q Q PI + P P T PQP
Sbjct: 150 PPQNPNPTPIPAPNPNPNPIQIQN------------------PNPIHNPNPRPTPTPPQP 275
Query: 383 R---TSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVIDSPPS 424
R T + + P +P+ + + + P P + +S PS
Sbjct: 276 RPPPTFNRAPPPQQQQPSHFSHFSSLPPSSAPSPSPASSFNSTPS 410
Score = 33.9 bits (76), Expect = 0.10
Identities = 40/175 (22%), Positives = 58/175 (32%)
Frame = +3
Query: 368 IIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVIDSPPSNTS 427
++ QP TS+ S + +P + T SST TP PI+ PP N +
Sbjct: 3 LMDPQPPATAAATARSTSEPSQSQPPLQPPSSLPQTSSST--TP---PISAPPHPPQNPN 167
Query: 428 ESIRKFMEVRKEKVSALEEYYLTCPSPRQYPGPRPERLVDPDEPILANPIQEADPLVQQA 487
P+P P P P +P + NPI +P
Sbjct: 168 ------------------------PTPIPAPNPNP----NPIQIQNPNPIHNPNPRPTPT 263
Query: 488 HPVPDQQEPIQPDPEPEQSVSNQSSVRSPHPLVETSDPHRGTSEPNAPIINIGSP 542
P P P P+Q + S S P P +S + P +I +P
Sbjct: 264 PPQPRPPPTFNRAPPPQQQQPSHFSHFSSLPPSSAPSPSPASSFNSTPSPSIPAP 428
>TC10315 similar to UP|P93166 (P93166) SCOF-1, partial (42%)
Length = 592
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Frame = +3
Query: 312 QPAAQTTTPPHSPRSSFFQPSPTE----------APLWNLLQTQTSRSEDPTSLLTIPYD 361
+P+ PPH RS+ QPS T + L + + TS S SL P
Sbjct: 150 KPSTHPPPPPHPSRSTTTQPSVTRRSRGQNGNAPSDLVHAPRKSTSLSASSCSLAAAPPP 329
Query: 362 PLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVS 413
PLP P+ ++ P TS A R S P R+ DT +TA TP +
Sbjct: 330 PLP--PLRCNRQPLLPVPPGSATSAPCATRPSL-PTKRSADTRPATANTPAA 476
>TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-like
protein, partial (41%)
Length = 522
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/129 (27%), Positives = 55/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 300 HSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTS-RSEDPTSLLTI 358
HS+ P S +TT+ SP S+ +PSP+ AP L +S S P S T
Sbjct: 65 HSTLTKPPSQISSNPNKTTSTTSSPTSTTPKPSPSPAPSSTLRAPSSSPASASPASSPT- 241
Query: 359 PYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINV 418
P PS P P P TS+ S+P A++ ++ + +S + + +
Sbjct: 242 -KSPKPSSPSASAPPSSTPLTPSTATSE-SSPTATSSSSSASPAPPTSFSALSRALELKA 415
Query: 419 IDSPPSNTS 427
+ S PS S
Sbjct: 416 LASSPSPPS 442
Score = 28.5 bits (62), Expect = 4.2
Identities = 27/114 (23%), Positives = 45/114 (38%)
Frame = +2
Query: 316 QTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEP 375
Q+T P+ P S P++ S +P + P + P P P
Sbjct: 35 QSTILPNKPLHSTLTKPPSQI------------SSNPNKTTSTTSSPTSTTPKPSPSPAP 178
Query: 376 NQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVIDSPPSNTSES 429
+ T P +S ASA PA+ T + ++ + + P + +P + TSES
Sbjct: 179 SSTLRAPSSSP-----ASASPASSPTKSPKPSSPSASAPPSSTPLTPSTATSES 325
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 38.9 bits (89), Expect = 0.003
Identities = 35/124 (28%), Positives = 44/124 (35%)
Frame = +1
Query: 301 SSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLLTIPY 360
SS+ P+PES TT P P +S PSPT +P
Sbjct: 169 SSSSPAPVPESPTTNSPTTAPPPPPASSPPPSPTHSP---------------------SS 285
Query: 361 DPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVID 420
P PS P P T P P S A P++ + T S + P S P +
Sbjct: 286 SPSPSAP---TSPAATSTPPSPSASS----SAVTSPSSAVSSTSSLSFSDPSSPPCSSPS 444
Query: 421 SPPS 424
SP S
Sbjct: 445 SPDS 456
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Frame = +3
Query: 282 SDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNL 341
SD D L + + SS+P P P PAA +++PP +P ++ PT +P
Sbjct: 54 SDSDPWLLSSAASRSPPSSSSSPSPPPPPHAPAAASSSPP-TPSATL---PPTPSP---- 209
Query: 342 LQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRAS------AR 395
S DP+ L T +P S + N++ P H+AP S
Sbjct: 210 ----PSPRSDPSPLSTSTTNPTTSSSTT-PKTTTNKSNPNTARLSHAAP*GSPPLLTTTS 374
Query: 396 PAARTTDTDSSTAFTPVSFPINVIDSPP 423
P + T SS + P S ++ SPP
Sbjct: 375 PPSVTAPRTSSASRLPSSSALDAALSPP 458
>AW719831
Length = 436
Score = 38.5 bits (88), Expect = 0.004
Identities = 42/151 (27%), Positives = 58/151 (37%), Gaps = 6/151 (3%)
Frame = +1
Query: 286 LNLFDALPISALLQHSSNPLTPIPESQPAAQTTT---PPHSPRSSFFQPSP---TEAPLW 339
+N LP+ L Q+ ++ +PIP Q TTT P P+P T P
Sbjct: 4 VNNHTPLPLKILHQNPNSQKSPIPFHQQWRTTTTTTLPTPILAIPLLAPAPM*STPPPTM 183
Query: 340 NLLQTQTSRSEDPTSLLTIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAAR 399
T T S +P LL P P R+S +A A + PA
Sbjct: 184 TPTTTTTPPSTNPHLLLPPP--------------------PHARSSSCAATAAKSSPAPT 303
Query: 400 TTDTDSSTAFTPVSFPINVIDSPPSNTSESI 430
TT + +S A TP S P S P ++ S+
Sbjct: 304 TTTSPTSPA-TPRSSPSTASSSSPPSSPSSL 393
>AV419448
Length = 382
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +2
Query: 302 SNPLTPIPESQPAAQTTT-----PPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTSLL 356
S PL P P A + T PP SP ++ P+P + +L T TS S P S +
Sbjct: 80 SPPLHPPTPPSPTASSWTSASAPPPSSPTATPSAPTPPLSAALSLASTATS-SPSP-SPI 253
Query: 357 TIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDT 403
+ P LP P P P +T +S S+P A++ PAAR T
Sbjct: 254 SNPSASLPPTP----PPPPTKTP----SSTSSSPAATSSPAARVDPT 370
Score = 29.3 bits (64), Expect = 2.5
Identities = 21/68 (30%), Positives = 33/68 (47%)
Frame = +2
Query: 362 PLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVIDS 421
P PS+P + P T P P S ++ ASA P + T T S+ P+S +++ +
Sbjct: 53 PSPSQPSLPSPPLHPPTPPSPTASSWTS--ASAPPPSSPTATPSAPT-PPLSAALSLAST 223
Query: 422 PPSNTSES 429
S+ S S
Sbjct: 224 ATSSPSPS 247
>BI420016
Length = 559
Score = 38.1 bits (87), Expect = 0.005
Identities = 37/135 (27%), Positives = 48/135 (35%), Gaps = 2/135 (1%)
Frame = +2
Query: 295 SALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTS 354
S H TP P + P QT P + + PSP P + P S
Sbjct: 101 STATTHLRRHQTPPP*APPEPQTLKKPTTQCTHGGNPSPKPVPASTPSPPSSPTLTPPPS 280
Query: 355 LLTIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSF 414
P P P+ P+ P T P P S P SA T T S+ TP S
Sbjct: 281 ----PPSPTPNAPLSPSSPPSPPTPPSPPPSPAPNPTPSA-----TGSTTPSSPLTPTSA 433
Query: 415 PINVIDS--PPSNTS 427
++ S P++TS
Sbjct: 434 SLSSPSSLFSPASTS 478
>TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein), partial (6%)
Length = 1003
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/104 (28%), Positives = 44/104 (41%), Gaps = 4/104 (3%)
Frame = +1
Query: 301 SSNPLTPIPESQPAAQTTTPP---HSPRSSFFQPSPT-EAPLWNLLQTQTSRSEDPTSLL 356
SS+ L+P P + TT PP H ++ PT AP L ++T S
Sbjct: 166 SSSSLSPWLSPSPPSSTTPPPPPSHRTNNNNLSTQPTPSAPSATSLASRTPASP------ 327
Query: 357 TIPYDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARPAART 400
P P + P H+ P+ + P +S S PR+ +RP T
Sbjct: 328 --PSPPPTTTPPTHNPSSPSPSAPPWTSSPPSPPRSESRPQVLT 453
>BP078507
Length = 414
Score = 37.7 bits (86), Expect = 0.007
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = -1
Query: 306 TPIPESQPAAQTTTPPHSPRSSFFQPSPTEA--PLWNLLQTQTSRSEDPTSLLTIPYDPL 363
TP+ QP+ T P+ SS +P P+ + P LLQ PTS P P
Sbjct: 285 TPLHSPQPSPNAPTSPYPAPSSQLRPPPSTSHQPPPTLLQ--------PTSDTPSPSPPP 130
Query: 364 PSEPIIHDQPEPNQT--EPQPRTSDHSAPRASARPAARTTDTDSSTA 408
PS P + P P+ + P P +S S P++S R+T +TA
Sbjct: 129 PSSP---NPPPPHHSPNPPHPPSSSPSPPQSS--QGQRSTAQSPATA 4
Score = 35.4 bits (80), Expect = 0.034
Identities = 36/126 (28%), Positives = 46/126 (35%)
Frame = -1
Query: 420 DSPPSNTSESIRKFMEVRKEKVSALEEYYLTCPSPRQYPGPRPERLVDPDEPILANPIQE 479
D+P S+T S +K S+ E Y P+P P P P P P A Q
Sbjct: 351 DTPSSHT*SS-------PTDKQSSPESY----PTPLHSPQPSPNA---PTSPYPAPSSQL 214
Query: 480 ADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQSSVRSPHPLVETSDPHRGTSEPNAPIINI 539
P P P +P P P S SS P P + PH +S P+ P +
Sbjct: 213 RPPPSTSHQPPPTLLQPTSDTPSP--SPPPPSSPNPPPPHHSPNPPHPPSSSPSPPQSSQ 40
Query: 540 GSPQVA 545
G A
Sbjct: 39 GQRSTA 22
Score = 27.3 bits (59), Expect = 9.4
Identities = 21/68 (30%), Positives = 30/68 (43%), Gaps = 6/68 (8%)
Frame = -1
Query: 293 PISALLQHSSNPLTP------IPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQT 346
P LLQ +S+ +P P P + PPH P SS PSP ++ Q Q
Sbjct: 186 PPPTLLQPTSDTPSPSPPPPSSPNPPPPHHSPNPPHPPSSS---PSPPQSS-----QGQR 31
Query: 347 SRSEDPTS 354
S ++ P +
Sbjct: 30 STAQSPAT 7
>TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, partial
(57%)
Length = 1185
Score = 37.4 bits (85), Expect = 0.009
Identities = 43/168 (25%), Positives = 63/168 (36%), Gaps = 7/168 (4%)
Frame = +2
Query: 236 PKKKQKKVRIVVKPTRVEPAAAEVRRTEAPARVTRSSAHTSKPALASDDDLNLFDALPIS 295
P + + + I+ P +AA + + A S+ TS P L A S
Sbjct: 77 PSQPRLRCAILANPHLPPCSAALTQPSSASPATPPSTPPTSSPPAT----LASLSARSAS 244
Query: 296 ALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSEDPTS- 354
S LTP+P + P T+TPP PSP ++ T+ + PTS
Sbjct: 245 KPPPPSPARLTPLPSASPVTTTSTPP--------TPSPAATNASPSRRSTTTTTTPPTSP 400
Query: 355 ---LLTIP---YDPLPSEPIIHDQPEPNQTEPQPRTSDHSAPRASARP 396
LLT P PLP + P+ + P + S P +S P
Sbjct: 401 TPMLLTSPPMKLKPLPGYFLPLPTPKAPISTPLTTPTPKSTPSSSISP 544
Score = 29.3 bits (64), Expect = 2.5
Identities = 33/134 (24%), Positives = 48/134 (35%), Gaps = 5/134 (3%)
Frame = +2
Query: 236 PKKKQKKVRIVVKPTRVEPAAAEVRRTEAPARVTRSSAHTSKPALASDDDLNLFDA---- 291
P V P PAA + T + + P L + + L
Sbjct: 278 PLPSASPVTTTSTPPTPSPAATNASPSRRSTTTTTTPPTSPTPMLLTSPPMKLKPLPGYF 457
Query: 292 LPISALLQHSSNPLT-PIPESQPAAQTTTPPHSPRSSFFQPSPTEAPLWNLLQTQTSRSE 350
LP+ S PLT P P+S P++ + +P + +S P PTE+ N S
Sbjct: 458 LPLPTPKAPISTPLTTPTPKSTPSS-SISPKLTRQSITAPPPPTESFRCNHRARSLQSST 634
Query: 351 DPTSLLTIPYDPLP 364
T+ LT LP
Sbjct: 635 TTTTTLTTKSISLP 676
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.128 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,034,268
Number of Sequences: 28460
Number of extensions: 217196
Number of successful extensions: 2473
Number of sequences better than 10.0: 295
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2376
length of query: 766
length of database: 4,897,600
effective HSP length: 97
effective length of query: 669
effective length of database: 2,136,980
effective search space: 1429639620
effective search space used: 1429639620
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0166.6