BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0166.1
(916 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC11605 123 5e-48
BI418523 155 2e-38
BP033684 139 2e-33
TC18710 121 4e-28
AV767121 113 2e-25
TC18883 112 2e-25
AV780221 97 1e-20
TC12547 83 2e-16
BP066769 78 7e-15
BP078534 70 2e-12
BP041113 69 4e-12
AV765095 68 6e-12
BP083970 68 6e-12
BP056414 66 3e-11
TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, p... 60 2e-09
BP060613 59 3e-09
AV780705 57 1e-08
TC11323 57 1e-08
TC19890 56 3e-08
AV418280 55 5e-08
>TC11605
Length = 546
Score = 123 bits (308), Expect(2) = 5e-48
Identities = 51/98 (52%), Positives = 65/98 (66%)
Frame = +1
Query: 667 WVLWSKVLLREGVVWCVPASILSLLKEWDSLRKGSDLVLWRLIPYALAWSVWMARNGLIF 726
W W+ +L R+GV WCVP S+ LLKEW SLR SD VLW L+P A+ WS+W+ARN L+F
Sbjct: 1 WRFWNSILARDGVQWCVPGSVGDLLKEWPSLRAKSDRVLWELVPCAVVWSIWLARNDLVF 180
Query: 727 KGEEVSVETVWDIHITRMYWWIKAGKPHCSFSLCDFLQ 764
+E E VWD+H+ R+ WW KA C +S DF Q
Sbjct: 181 NQKEFIYENVWDLHLMRVMWWTKAWWKGCPYSTTDFYQ 294
Score = 86.3 bits (212), Expect(2) = 5e-48
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +3
Query: 763 LQNFGAVTVGQRVERCRQDVWTCPPEG-ILKWNVDGAARGAPGMGGIGGVVRDATGEIRG 821
L NF + ++ R VW CPPE ILK+NVDG+ARG+PG+ G GG++R+A + G
Sbjct: 288 LSNFENIKTVGKMRMVRNCVW-CPPEANILKFNVDGSARGSPGISGAGGILRNAESAVLG 464
Query: 822 FFSMSLGVVFAYEAEVKAIRTALEFSK 848
FS LGV+ AY+AEVKAI AL+FSK
Sbjct: 465 RFSKPLGVLCAYQAEVKAILLALKFSK 545
>BI418523
Length = 496
Score = 155 bits (393), Expect = 2e-38
Identities = 72/165 (43%), Positives = 110/165 (66%)
Frame = +1
Query: 721 RNGLIFKGEEVSVETVWDIHITRMYWWIKAGKPHCSFSLCDFLQNFGAVTVGQRVERCRQ 780
RN IF+G+E+ VWD H+ ++ WWIK+ C + + +QN G + + +++ R
Sbjct: 1 RNAYIFRGKEIVSTEVWDSHLLKLSWWIKSMWRECHYDIYQIMQNLGDIRITPKLKPPRC 180
Query: 781 DVWTCPPEGILKWNVDGAARGAPGMGGIGGVVRDATGEIRGFFSMSLGVVFAYEAEVKAI 840
W+ P G +K NVDGA++G PG G+GGV RDA +I G+FS++ G +AYEA+V++I
Sbjct: 181 WSWSPPSAGFIKCNVDGASQGNPGPSGVGGVFRDANRKILGYFSLNSGNGWAYEAKVRSI 360
Query: 841 RTALEFSKEFGLSRVVVESDSTLAVGWVSKRANRPWKLLNDLHMI 885
AL F ++F L +++ESDST+AV WV +ANRPW+L N+L+ I
Sbjct: 361 LNALVFIQKFLLKNILIESDSTVAVEWVMSKANRPWRLSNELNHI 495
>BP033684
Length = 557
Score = 139 bits (350), Expect = 2e-33
Identities = 64/145 (44%), Positives = 94/145 (64%)
Frame = -1
Query: 693 EWDSLRKGSDLVLWRLIPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMYWWIKAGK 752
EW S+ SD +LW LI YAL WS+W+ R +FKG+ S + VWD+H+ ++WWIKA
Sbjct: 557 EWSSIVVASDPMLWNLILYALVWSLWLERKQSVFKGKLASSQEVWDLHLMTIFWWIKAVW 378
Query: 753 PHCSFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGMGGIGGVV 812
C ++ F ++F ++ + + + R WT P GILK+NVDGA++G PG G+GGV+
Sbjct: 377 KECPYNFDQFHRDFCMLSFKKLIPKQRLKGWTPPSRGILKFNVDGASQGNPGPSGVGGVL 198
Query: 813 RDATGEIRGFFSMSLGVVFAYEAEV 837
D + GFFS+++G +AYEAEV
Sbjct: 197 CDYRSMVLGFFSINMGHGWAYEAEV 123
>TC18710
Length = 843
Score = 121 bits (304), Expect = 4e-28
Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 GPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYRL 61
G DG N F+++ ++K+ + F E ++ +N + LIPK PE + +R
Sbjct: 188 GMDGMNGLFYQKNGDVVKDSVT*AILAFLERAEIPNEINETLVTLIPKVPHPESINQFRP 367
Query: 62 ISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNE---VVDTMLSS 118
IS +YK+++K+ ARL+ MP L+S Q F +GRQI + LLI E ++ +
Sbjct: 368 ISGCTFLYKVISKIFVARLKDAMPDLISPMQSGFIQGRQIQDNLLIVQEAFHAINRPGAL 547
Query: 119 GRGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEF 178
GR ++KLD KAYD +EW FL + + GF W I VS + +NG
Sbjct: 548 GRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFSTNWVKMIMILVSGVSYNYKINGVVGPK 727
Query: 179 FEIEKGLRQGDPLSPLLFNLCVQGLSVM 206
++GLRQGDP SP LF ++ LS++
Sbjct: 728 LLPQRGLRQGDPFSPYLFLFTMEVLSLL 811
>AV767121
Length = 525
Score = 113 bits (282), Expect = 2e-25
Identities = 66/182 (36%), Positives = 102/182 (55%)
Frame = +2
Query: 333 SVSLSGRLVVLRSVASAIPIYHMAVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWE 392
+VS GR+ +++SV +A+P++ ++ +K P+GV +LMR FLWG S +IA V W
Sbjct: 23 TVSFGGRIFLIQSVLTALPLFFLSFFKLPIGVGKSCVRLMRNFLWGGSENENKIA*VKWT 202
Query: 393 QVCKRKEIGGLGVEFLKFRNKAMLLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVL 452
VCK KE+GGLG++ L NKA+L K WR+ EP++LWRRV+ A+ S
Sbjct: 203 DVCKPKELGGLGIKDLFTFNKALLGK*RWRYLTEPDSLWRRVIEAQPDHYSC-------- 358
Query: 453 EGLRHPSRYMFDIVNVVLEDSVLGKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPR 512
S + DI+++ ED+ F +VG+G + FW + W+ S L+ + R
Sbjct: 359 -----GSSWWNDILSLCPEDA--DGWFSSGLKKLVGEGDQTKFWSEDWLGSGLLSARFRR 517
Query: 513 FY 514
Y
Sbjct: 518 LY 523
>TC18883
Length = 821
Score = 112 bits (281), Expect = 2e-25
Identities = 59/112 (52%), Positives = 74/112 (65%)
Frame = +1
Query: 804 GMGGIGGVVRDATGEIRGFFSMSLGVVFAYEAEVKAIRTALEFSKEFGLSRVVVESDSTL 863
G GIGG+ R++ EI GFFS +G FA+EAEV AI AL L + +ESDS+L
Sbjct: 1 GRCGIGGIFRNSDNEILGFFSKHVGEGFAFEAEVWAIFEALTICVNRQLRNLTIESDSSL 180
Query: 864 AVGWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREINCQPDFLAKTG 915
AVGWV+ R+ RPWKLLN L+ ID+ EV CL + H+FRE N + D LAK G
Sbjct: 181 AVGWVNNRSXRPWKLLNKLNQIDLWVAEVNCLSVKHIFREANGEVDKLAKRG 336
>AV780221
Length = 461
Score = 97.1 bits (240), Expect = 1e-20
Identities = 57/163 (34%), Positives = 85/163 (51%), Gaps = 1/163 (0%)
Frame = +3
Query: 340 LVVLRSVASAIPIYHMAVYKAPLG-VVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRK 398
L ++RSV A+P++H+ +K P G ++ F GG++IAWV W VC+ K
Sbjct: 3 LCLIRSVLIALPLFHLPFFKLPTGGFYTNVNN**DPFFGREVEGGKKIAWVKWSTVCRPK 182
Query: 399 EIGGLGVEFLKFRNKAMLLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHP 458
+ GGLGV+ L NKA+L KW WR +E + LW +VL KY N+IP +
Sbjct: 183 DEGGLGVQNLGLFNKALLGKWRWRMLKERDGLWYKVLLIKY-KNAIP----------QSA 329
Query: 459 SRYMFDIVNVVLEDSVLGKTFRDQCFCVVGDGLRISFWRDPWV 501
S + D+ + ED G R C +G+G + FW + W+
Sbjct: 330 SSWWNDLHSTCFEDGGGGWMQRGLC-RRIGEGTEVKFWNENWL 455
>TC12547
Length = 924
Score = 82.8 bits (203), Expect = 2e-16
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = +1
Query: 800 RGAPGMGGIGGVVRDATGEIRGFFSMSLGVVFAYEAEVKAIRTALEFSKE-FGLSRVVVE 858
R PG G+ GV+R+ G+I G FS+ +G + + K F + + + +E
Sbjct: 22 REPPGDSGVAGVLRNREGKILGCFSIPMGRKWLSRQK*KPF*VR*RFVRSSINVKNLTIE 201
Query: 859 SDSTLAVGWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREINCQPDFLAKTGC 916
SDST+ + + RPWKL+N+L++IDILR EV CL I+H+FRE N A+ GC
Sbjct: 202 SDSTMVMV*ANNSVPRPWKLVNELNLIDILRYEVNCLGIFHIFREANFLLMLWAELGC 375
>BP066769
Length = 485
Score = 77.8 bits (190), Expect = 7e-15
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +3
Query: 825 MSLGVVF---AYEAEVKAIRTALEFSKEFGLSRVVVESDSTLAVGWVSKRANRPWKLLND 881
++LG+ F AYEAEVKAI L F +F V++ES++++A+GWV RP KL+N+
Sbjct: 33 LALGIDFGGGAYEAEVKAILHGLTFC*QFFFRNVILESNASVAIGWVESSDKRP*KLINE 212
Query: 882 LHMIDILRNEVECLRIYHVFREIN 905
L+ ID+L EV CL I H +RE N
Sbjct: 213 LNQIDVLMKEVNCLGIRHTYREGN 284
>BP078534
Length = 410
Score = 70.1 bits (170), Expect = 2e-12
Identities = 25/70 (35%), Positives = 43/70 (60%)
Frame = -3
Query: 492 RISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGWEWNLGFRRRFFGWEEQ 551
+ + W DPW+ + L ++PR + + N+ +V++ G + W WNL FRR FF WEE+
Sbjct: 228 QFNLWLDPWIRERALCDMFPRLFTLCENKGALVADVGSYHGGSWHWNLSFRREFFQWEEE 49
Query: 552 VYDELIARCN 561
++ +L+ CN
Sbjct: 48 IHLQLL--CN 25
>BP041113
Length = 503
Score = 68.6 bits (166), Expect = 4e-12
Identities = 49/171 (28%), Positives = 76/171 (43%), Gaps = 5/171 (2%)
Frame = +1
Query: 495 FWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGWEWNLGFRR----RFFGWEE 550
FW + W+ TL Y R + ++ + + E G +++ W W L +RR R GW E
Sbjct: 1 FWTEDWIGMGTLRDRYYRLFNLSKEKRCCILECGGWNHGVWTWKLSWRRALVGRELGWLE 180
Query: 551 QVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKTFCMEVELQLYGPPSWVVPSCVKKL 610
+ +L C + +D +WL G YTV + ++ + + + +
Sbjct: 181 LMMKDLSGVC---LSEGVEDKWLWL--PGGTYTVNSAYSFLQAPTLADTDPIFATIWRTV 345
Query: 611 APQKVVLFLWQAAENRVAVMVNLHNRGVLVD-AEAVCVLCGQAEESVTHLI 660
AP V F W+ R+ NL R V+VD A VC C ESVTHL+
Sbjct: 346 AP-SVKAFAWRCLLGRLPTYDNLIKRQVVVDPAMTVCKFCQGEVESVTHLL 495
>AV765095
Length = 378
Score = 68.2 bits (165), Expect = 6e-12
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -3
Query: 860 DSTLAVGWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREIN 905
D LAVGWV R NRPWKLLNDL++ID+L +E++C+ I+H+FRE N
Sbjct: 376 DLYLAVGWVRCRDNRPWKLLNDLNLIDLLLSELDCIEIFHIFREGN 239
>BP083970
Length = 375
Score = 68.2 bits (165), Expect = 6e-12
Identities = 31/64 (48%), Positives = 45/64 (69%)
Frame = -3
Query: 852 LSRVVVESDSTLAVGWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREINCQPDFL 911
+ + + SDS+LAVGW++ +NRPWKLL+ L+ ID EV CL++ H++RE N + D L
Sbjct: 370 IRNISI*SDSSLAVGWINNCSNRPWKLLSMLNPIDHWLVEVNCLKVSHIYREANSEADKL 191
Query: 912 AKTG 915
AK G
Sbjct: 190 AKRG 179
>BP056414
Length = 606
Score = 65.9 bits (159), Expect = 3e-11
Identities = 50/137 (36%), Positives = 69/137 (49%), Gaps = 4/137 (2%)
Frame = -3
Query: 783 WTCPPEGILKWNVDGAARGAPGMGGIGGVVRDATGEIRGFFSMSLGVV---FAYEAEVKA 839
WT PPEG K NVDGA G GGVVRDA G F+ SLGV+ A+ E+ A
Sbjct: 562 WTRPPEGWFKVNVDGALSG-DLQASCGGVVRDAAGSWSKGFARSLGVLRWHXAFFVELMA 386
Query: 840 IRTALEFSKEFGLSRVVVESDSTLAVGWVSK-RANRPWKLLNDLHMIDILRNEVECLRIY 898
++TA++F + + +V++ESDS V + A+ P + I + + I
Sbjct: 385 VQTAVDFIMSWDIPQVIIESDSQQVVELLQNFNASSPHQYGEIAWDIQQKISVHGSIVIT 206
Query: 899 HVFREINCQPDFLAKTG 915
RE N D+LAK G
Sbjct: 205 STPREANFLADYLAKVG 155
>TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, partial
(14%)
Length = 592
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/89 (33%), Positives = 51/89 (56%)
Frame = -3
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PG DG N F+++ ++K ++ +F++ G+L LN + LIPK E + +R
Sbjct: 275 PGMDGINGLFYQQNREIVKNDVNNAILDFFDHGELPVELNETLVTLIPKIPHAEAIQQFR 96
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLS 89
IS IYK+++K++ ARL+ M L+S
Sbjct: 95 PISCCSFIYKVISKIIVARLKPDMVNLIS 9
>BP060613
Length = 378
Score = 59.3 bits (142), Expect = 3e-09
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +1
Query: 371 LMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAMLLKWAWRFGQEPEAL 430
L C +W S G R + W W+ + + K+ GGLG + + +N+A+L K AWR P+AL
Sbjct: 28 LSGCQVWWSSKGTRGVHWRKWDLLTELKDEGGLGFKDFEIQNQALLAKQAWRILHNPDAL 207
Query: 431 WRRVLCAKY 439
W ++L A Y
Sbjct: 208 WVQILKALY 234
>AV780705
Length = 524
Score = 57.4 bits (137), Expect = 1e-08
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Frame = -2
Query: 297 PLPYLG--SVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYH 354
P YLG ++ G + W + EKV+ L ++ +G+ V+++++ AIP Y
Sbjct: 493 PGHYLGLPAIWGRNKSHSLVW--IEEKVKEKLEGWKETLLNQAGKEVLIKAIIQAIPSYA 320
Query: 355 MAVYKAPLGVVADIEKLMRCFLWGRSGGGR-RIAWVAWEQVCKRKEIGGLGVEFLKFRNK 413
M + P + L+ F W G G + KE GG+G L+ +N
Sbjct: 319 MTIVHFPKTFCNSLYALVADFWWKSQGEGAVEYTGAVGTK*PLSKEKGGVGFRDLRTQNL 140
Query: 414 AMLLKWAWRFGQEPEALWRRVLCAKY 439
A L + AWR PEALW RV+ + Y
Sbjct: 139 AFLARQAWRVLTNPEALWVRVMKSLY 62
>TC11323
Length = 657
Score = 57.0 bits (136), Expect = 1e-08
Identities = 37/120 (30%), Positives = 57/120 (46%)
Frame = +2
Query: 783 WTCPPEGILKWNVDGAARGAPGMGGIGGVVRDATGEIRGFFSMSLGVVFAYEAEVKAIRT 842
W P G K N DG++ G G G GG++RD + FS+ L V + + AI
Sbjct: 5 WLKPVHGRFKLNFDGSSLGNRGNAGGGGLLRDGSSNFIFGFSIFLAVAQIMKLSLCAILE 184
Query: 843 ALEFSKEFGLSRVVVESDSTLAVGWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFR 902
L K G + +E DS + V W+ R+ + W L + + L +V+ I+H+FR
Sbjct: 185 GLLVCKPLGYDGIGIECDSNIVVSWIRSRSCQLWYLWDF*GPLKGLL-DVKDYSIHHIFR 361
>TC19890
Length = 477
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 816 TGEIRGFFSMSLGVVFAYEAEVKAIRTALEFSKEFG-LSRVVVESDSTLAVGWVSKRANR 874
TGE FF +L V + L FS L V++ S S+LA+GWV + NR
Sbjct: 55 TGESWAFFIANL-VFICSSSTSSGYFIRLSFSAGSSPLHHVLILSASSLALGWVHCKLNR 231
Query: 875 PWKLLNDLHMIDILRNEVECLRIYHVFREIN 905
P LLN+L++ID + EV C + H+F E N
Sbjct: 232 PLALLNELNLIDFIMREVGCFGVAHIFGESN 324
>AV418280
Length = 398
Score = 55.1 bits (131), Expect = 5e-08
Identities = 32/117 (27%), Positives = 54/117 (45%), Gaps = 1/117 (0%)
Frame = -2
Query: 643 EAVCVLCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSLRKGSD 702
+ C C EE HL C F+ +W + G+ +PAS L+ ++ + +
Sbjct: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKN 218
Query: 703 LVLWRL-IPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMYWWIKAGKPHCSFS 758
L L I A WS+W+ RN +IF+ + + D+ +R + W+KA C F+
Sbjct: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA--KFCGFT 53
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.326 0.142 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,435,989
Number of Sequences: 28460
Number of extensions: 320549
Number of successful extensions: 2064
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2052
length of query: 916
length of database: 4,897,600
effective HSP length: 99
effective length of query: 817
effective length of database: 2,080,060
effective search space: 1699409020
effective search space used: 1699409020
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0166.1