BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0141.1
(705 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP053476 147 7e-36
AU089102 121 4e-28
BP030332 120 6e-28
AV413186 87 9e-18
BP066774 81 5e-16
BP081623 78 6e-15
BP038410 74 1e-13
AV769479 56 2e-08
BP063629 51 6e-07
AI967878 49 4e-06
AV409405 48 6e-06
TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14 (At1g5589... 44 1e-04
AV771187 43 2e-04
AV781023 40 0.001
AV773273 40 0.001
TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-l... 39 0.003
AV767495 37 0.014
BP035488 37 0.014
AV417736 36 0.018
AV766731 36 0.018
>BP053476
Length = 514
Score = 147 bits (370), Expect = 7e-36
Identities = 69/154 (44%), Positives = 101/154 (64%)
Frame = -3
Query: 552 WDGVVEIRKMMKERNIKKEPGASWLEIRNVNHVFVSEGCKHPESNEINKKVQQLLAMIKP 611
W V IRK M + +KK PG S +E+ N + F HP+S ++ ++++ ++K
Sbjct: 512 WTDVQTIRKSMLQDGVKKTPGYSLVELANRVYEFTLGDRSHPQSQDVYALLEKITELLKL 333
Query: 612 LGYVPNISAVLHDVEDEQKEGYLNCHSEKLAIAYGLMKMPSPAPIRIIKNLRMCDDCHTA 671
GYVP VL D+E+E+KE L+ HSEK+AIA+ L+ PIR++KNLR+C DCH A
Sbjct: 332 EGYVPRTENVLADIEEEEKEPALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMA 153
Query: 672 VKLISKVTNRFIIVRDANRFHHFRDGSCTCADHW 705
++LISKV +R I++RD +RFH FR G C+C D+W
Sbjct: 152 IQLISKVYDREIVIRDRSRFHPFRGGKCSCKDYW 51
>AU089102
Length = 480
Score = 121 bits (303), Expect = 4e-28
Identities = 57/157 (36%), Positives = 90/157 (57%)
Frame = +2
Query: 422 FQDMKSAGESPNNVTFVGVLSACAHLALVDKGLDYLYNEMKNHKIEPGLEHYTCMVVLYC 481
F + G N+VT+V +L+AC+H LVD+G+ Y +KN I+ HY C+V L
Sbjct: 5 FGTRQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEXHYACLVDLCG 184
Query: 482 RAGLLEKAENFMKTTKVKWDIVAWRTLLNSCRVHRNYDLGKRIAESILQMDPQDMGTYTL 541
RAG L++ ++ VK + W LL C VH N D+GK + IL+++ ++ GTY+L
Sbjct: 185 RAGRLKEXFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSL 364
Query: 542 LSNMHATANMWDGVVEIRKMMKERNIKKEPGASWLEI 578
LSNM+A+ W + M ++ +KK+P W+E+
Sbjct: 365 LSNMYASXRXWKXXAPVXMKMNDKGLKKQPRCXWIEV 475
Score = 29.3 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 127 NEYVFTTVLSSCSHSGRVREGMQCHGYLFK 156
N+ + +L++CSH+G V EG+Q L K
Sbjct: 38 NDVTYVELLTACSHAGLVDEGIQYFDKLLK 127
>BP030332
Length = 466
Score = 120 bits (302), Expect = 6e-28
Identities = 51/105 (48%), Positives = 76/105 (71%)
Frame = -1
Query: 601 KVQQLLAMIKPLGYVPNISAVLHDVEDEQKEGYLNCHSEKLAIAYGLMKMPSPAPIRIIK 660
K+++ ++ +K GY P+++ V D E ++KE L HSEK+A+A+GL+ +P PI I+K
Sbjct: 463 KLEEXVSRLKLEGYEPDLNQVFLDFESDEKESQLVLHSEKVALAFGLLSLPQGLPIHIVK 284
Query: 661 NLRMCDDCHTAVKLISKVTNRFIIVRDANRFHHFRDGSCTCADHW 705
NLR+C DCHT ++L+SK+ R I+VRD NRFHHF G C+C +HW
Sbjct: 283 NLRICCDCHTFMQLVSKIYKRRIVVRDQNRFHHFDKGCCSCRNHW 149
>AV413186
Length = 398
Score = 87.0 bits (214), Expect = 9e-18
Identities = 46/134 (34%), Positives = 74/134 (54%), Gaps = 1/134 (0%)
Frame = +1
Query: 376 NMYSKSGDIDSSYNVFSDTMCR-DVTTWNSMICGYSHHGLGQEALRVFQDMKSAGESPNN 434
+MYSK G +++++ VF+ + DV WN+MI +HHG G EA+ + DM +G PN
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 435 VTFVGVLSACAHLALVDKGLDYLYNEMKNHKIEPGLEHYTCMVVLYCRAGLLEKAENFMK 494
TFV +L+AC+ LV +GL + + P EHY C+ L RAG +++ +K
Sbjct: 184 ATFVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDES---VK 354
Query: 495 TTKVKWDIVAWRTL 508
++ + W +L
Sbjct: 355 GLQIMDCTLGWNSL 396
Score = 53.5 bits (127), Expect = 1e-07
Identities = 33/111 (29%), Positives = 59/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 67 LYVKCGRLRLARSMFDKMPLR-DVFSWNDLMTGYMHSGNYLEVLVLFKNLVSSSTTQHAC 125
+Y KCG L A +F+ + + DV WN +++ H G E +V+ +++ S
Sbjct: 7 MYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVE---- 174
Query: 126 PNEYVFTTVLSSCSHSGRVREGMQCHGYL-FKYGLVSYQFVKSALFNMYAR 175
PN F +L++CS SG V+EG+Q ++ ++G+V Q + L ++ R
Sbjct: 175 PNRATFVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVR 327
Score = 50.8 bits (120), Expect = 7e-07
Identities = 28/79 (35%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Frame = +1
Query: 275 DMYGKCCHVLNARKVFDGLQNR-NVVVWTSLMSAYLQNRYFEETLDLLTCMDQEDTLPNE 333
DMY KC + A +VF+ + N+ +VV+W +++SA + + E + +L M + PN
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 334 CTFKVLLGACAGIALLKHG 352
TF VLL AC+ L++ G
Sbjct: 184 ATFVVLLNACSLSGLVQEG 240
>BP066774
Length = 516
Score = 81.3 bits (199), Expect = 5e-16
Identities = 38/67 (56%), Positives = 43/67 (63%)
Frame = -1
Query: 637 HSEKLAIAYGLMKMPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRFIIVRDANRFHHFRD 696
HSE+ AIA+GL+ PI + KNL MC CH VK ISK R I VRDA RFHHFR
Sbjct: 462 HSERQAIAFGLLNSAPGMPIWVTKNLYMCQSCHNIVKFISKEVRREISVRDAERFHHFRG 283
Query: 697 GSCTCAD 703
G C+C D
Sbjct: 282 GICSCMD 262
>BP081623
Length = 461
Score = 77.8 bits (190), Expect = 6e-15
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = -2
Query: 505 WRTLLNSCRVHRNYDLGKRIAESILQMDPQDMGTYTLLSNMHATANMWDGVVEIRKMMKE 564
W LL +CR++ + LG+ AE + ++ PQ G Y LL+NM+A WD ++R++MK
Sbjct: 457 WGALLGACRIYGDVGLGRWAAEHLFELKPQHCGYYILLANMYAEIERWDDANKVRQLMKS 278
Query: 565 RNIKKEPGASWLEIRNVNHVFV 586
R KK PG SW+++ + H F+
Sbjct: 277 RGAKKNPGCSWVKVGDKMHAFL 212
>BP038410
Length = 468
Score = 73.6 bits (179), Expect = 1e-13
Identities = 43/130 (33%), Positives = 66/130 (50%)
Frame = -2
Query: 314 FEETLDLLTCMDQEDTLPNECTFKVLLGACAGIALLKHGDLLHARLEKLGFKNYVIVNNA 373
+ DL T M + + T +LL A G LH ++GF +++ V A
Sbjct: 392 WNSVFDLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYYIQIGFSSHLNVLTA 213
Query: 374 LINMYSKSGDIDSSYNVFSDTMCRDVTTWNSMICGYSHHGLGQEALRVFQDMKSAGESPN 433
LI+MY+K+G + +F + +DV WN +I Y+ +GL EAL + Q M+ G N
Sbjct: 212 LIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 33
Query: 434 NVTFVGVLSA 443
+ TFVG+L A
Sbjct: 32 SSTFVGLLLA 3
Score = 52.4 bits (124), Expect = 2e-07
Identities = 36/128 (28%), Positives = 58/128 (45%)
Frame = -2
Query: 213 WEEAIGVLRRMGNECMVWDNATYVGVMGLCAQIGDLQLGLRVHARLLRGGLLFDEFVGSK 272
W + +M ++ +T + ++ G+ +G +H ++ G V +
Sbjct: 392 WNSVFDLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYYIQIGFSSHLNVLTA 213
Query: 273 LIDMYGKCCHVLNARKVFDGLQNRNVVVWTSLMSAYLQNRYFEETLDLLTCMDQEDTLPN 332
LIDMY K V RK+FD L +++VV+W L+ Y +N E L LL M + N
Sbjct: 212 LIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 33
Query: 333 ECTFKVLL 340
TF LL
Sbjct: 32 SSTFVGLL 9
Score = 48.1 bits (113), Expect = 5e-06
Identities = 40/155 (25%), Positives = 74/155 (46%), Gaps = 3/155 (1%)
Frame = -2
Query: 88 DVFSWN---DLMTGYMHSGNYLEVLVLFKNLVSSSTTQHACPNEYVFTTVLSSCSHSGRV 144
D+ SWN DL T SG L++S++T +L + +G
Sbjct: 404 DLVSWNSVFDLFTKMCWSG-----------LIASAST---------VLILLPAAGDTGNF 285
Query: 145 REGMQCHGYLFKYGLVSYQFVKSALFNMYARCLHVNLALQVLNTESGGDENDIFLYNSLL 204
G HGY + G S+ V +AL +MYA+ V+ ++ ++ + D+ L+N L+
Sbjct: 284 VVGKSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLV---DKDVVLWNCLI 114
Query: 205 NVLVESGRWEEAIGVLRRMGNECMVWDNATYVGVM 239
+G EA+ +L++M + M +++T+VG++
Sbjct: 113 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 9
Score = 43.9 bits (102), Expect = 9e-05
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = -2
Query: 23 IVKLLKLSADAKCLTSGKAIHAQLLVRDQASKRSDVVQLNSLIHLYVKCGRLRLARSMFD 82
++ LL + D GK++H + Q S + L +LI +Y K G + R +FD
Sbjct: 326 VLILLPAAGDTGNFVVGKSLHGYYI---QIGFSSHLNVLTALIDMYAKTGLVHWGRKIFD 156
Query: 83 KMPLRDVFSWNDLMTGYMHSGNYLEVLVLFKNL 115
+ +DV WN L+ Y +G E L L + +
Sbjct: 155 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 57
>AV769479
Length = 287
Score = 56.2 bits (134), Expect = 2e-08
Identities = 30/90 (33%), Positives = 46/90 (50%)
Frame = +1
Query: 340 LGACAGIALLKHGDLLHARLEKLGFKNYVIVNNALINMYSKSGDIDSSYNVFSDTMCRDV 399
+ C+ L G +HA + K ++N +I +NA +N Y++ G I S++ F RDV
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKWRN-LIADNAFVNFYAECGKISSAFRTFDRMAKRDV 192
Query: 400 TTWNSMICGYSHHGLGQEALRVFQDMKSAG 429
W ++I S GLG EAL + M G
Sbjct: 193 VCWTTIITACSQQGLGHEALLILSQMLGDG 282
Score = 49.3 bits (116), Expect = 2e-06
Identities = 28/89 (31%), Positives = 50/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 239 MGLCAQIGDLQLGLRVHARLLRG---GLLFDEFVGSKLIDMYGKCCHVLNARKVFDGLQN 295
M LC++ DL LG ++HA +L+ L+ D + ++ Y +C + +A + FD +
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKWRNLIAD----NAFVNFYAECGKISSAFRTFDRMAK 183
Query: 296 RNVVVWTSLMSAYLQNRYFEETLDLLTCM 324
R+VV WT++++A Q E L +L+ M
Sbjct: 184 RDVVCWTTIITACSQQGLGHEALLILSQM 270
Score = 48.1 bits (113), Expect = 5e-06
Identities = 25/81 (30%), Positives = 42/81 (50%)
Frame = +1
Query: 36 LTSGKAIHAQLLVRDQASKRSDVVQLNSLIHLYVKCGRLRLARSMFDKMPLRDVFSWNDL 95
L GK IHA +L SK +++ N+ ++ Y +CG++ A FD+M RDV W +
Sbjct: 43 LALGKQIHAHIL----KSKWRNLIADNAFVNFYAECGKISSAFRTFDRMAKRDVVCWTTI 210
Query: 96 MTGYMHSGNYLEVLVLFKNLV 116
+T G E L++ ++
Sbjct: 211 ITACSQQGLGHEALLILSQML 273
>BP063629
Length = 525
Score = 51.2 bits (121), Expect = 6e-07
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = +1
Query: 197 IFLYNSLLNVLVESGRWEEAIGVLRRMGNECMVWDNATYVGVMGLCAQIGDLQLGLRVHA 256
+F YN ++ + G + AI + +++ + + DN TY V+ +GD+ G +VHA
Sbjct: 286 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 465
Query: 257 RLLRGGLLFDEFVGSKLIDM 276
+++ GL FD +V + L+DM
Sbjct: 466 FVIKSGLEFDAYVCNSLMDM 525
>AI967878
Length = 393
Score = 48.5 bits (114), Expect = 4e-06
Identities = 34/119 (28%), Positives = 53/119 (43%), Gaps = 20/119 (16%)
Frame = +1
Query: 397 RDVTTWNSMICGYSHHGLGQEALRVFQDM----KSAGE----------------SPNNVT 436
R++ +WN+MI G+ HG ++ L +F +M K GE P+ VT
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 437 FVGVLSACAHLALVDKGLDYLYNEMKNHKIEPGLEHYTCMVVLYCRAGLLEKAENFMKT 495
F+G+L ACA L+ +G Y ++P L Y + GLL K ++ T
Sbjct: 211 FIGILCACARAELLAEGRSYFKQMTDVFGLKPILLIYGAWPICLQMHGLLMKPKSVCGT 387
>AV409405
Length = 424
Score = 47.8 bits (112), Expect = 6e-06
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +1
Query: 253 RVHARLLRGGLLFDEFVGSKLIDMYGKCCHVLNARKVFDGLQNRNVVVWTSLMSAYLQNR 312
++H+ L+ GL D F+ +KL +YGK + +A K+FD +++V +W +L+ Y
Sbjct: 199 QLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEG 378
Query: 313 YFEETLDLLTCM 324
+ ETL L M
Sbjct: 379 EWAETLSLFRRM 414
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/105 (28%), Positives = 46/105 (43%)
Frame = +1
Query: 11 VVNSRYLPPLEYIVKLLKLSADAKCLTSGKAIHAQLLVRDQASKRSDVVQLNSLIHLYVK 70
+V S Y+ + I LL+ C S +H+ L V +LN L Y K
Sbjct: 118 LV*SLYMKRRDLIATLLET---CHCEKSTSQLHSLCLKLGLTHDSFIVTKLNVL---YGK 279
Query: 71 CGRLRLARSMFDKMPLRDVFSWNDLMTGYMHSGNYLEVLVLFKNL 115
+ A +FD+ P + V+ WN L+ Y G + E L LF+ +
Sbjct: 280 HASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLFRRM 414
Score = 37.0 bits (84), Expect = 0.011
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 355 LHARLEKLGFKNYVIVNNALINMYSKSGDIDSSYNVFSDTMCRDVTTWNSMICGYSHHGL 414
LH+ KLG + + L +Y K I ++ +F +T + V WN+++ Y G
Sbjct: 202 LHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGE 381
Query: 415 GQEALRVFQDM 425
E L +F+ M
Sbjct: 382 WAETLSLFRRM 414
Score = 35.8 bits (81), Expect = 0.024
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +1
Query: 130 VFTTVLSSCSHSGRVREGMQCHGYLFKYGLVSYQFVKSALFNMYARCLHVNLALQVLNTE 189
+ T+L +C + Q H K GL F+ + L +Y + ++ A ++ +
Sbjct: 151 LIATLLETCHCE---KSTSQLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDET 321
Query: 190 SGGDENDIFLYNSLLNVLVESGRWEEAIGVLRRM 223
+ ++L+N+LL G W E + + RRM
Sbjct: 322 P---DKSVYLWNALLRRYRAEGEWAETLSLFRRM 414
>TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14
(At1g55890/F14J16_4), partial (33%)
Length = 588
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/78 (35%), Positives = 41/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 64 LIHLYVKCGRLRLARSMFDKMP----LRDVFSWNDLMTGYMHSGNYLEVLVLFKNLVSSS 119
LI LY K G + AR MFD+MP R V S+N L+ Y+HS Y V +FK +
Sbjct: 359 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 538
Query: 120 TTQHACPNEYVFTTVLSS 137
+ + P+ + TV+ +
Sbjct: 539 SVK---PDLVSYNTVIKA 583
Score = 32.0 bits (71), Expect = 0.35
Identities = 17/52 (32%), Positives = 31/52 (58%), Gaps = 4/52 (7%)
Frame = +2
Query: 267 EFVGSKLIDMYGKCCHVLNARKVFDGLQNRN----VVVWTSLMSAYLQNRYF 314
E ++LI +YGK AR++FD + RN V+ + +L++AYL ++ +
Sbjct: 341 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 496
>AV771187
Length = 484
Score = 42.7 bits (99), Expect = 2e-04
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = -3
Query: 416 QEALRVFQDMKSAGESPNNVTFVGVLSACAHLALVDKGLDYLYNEMK-NHKIEPGLEHYT 474
Q AL +F+DMK G +PN VT+ ++ + +D+ ++ L + + NH I P YT
Sbjct: 233 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYT 57
Query: 475 CMVVLYCRAGLLEKAENF 492
++ C AG + +A +F
Sbjct: 56 PIIHALCEAGRVAEAWSF 3
>AV781023
Length = 555
Score = 40.0 bits (92), Expect = 0.001
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 685 VRDANRFHHFRDGSCTCADHW 705
+RD RFHHFR G C+C+D+W
Sbjct: 555 LRDHTRFHHFRGGQCSCSDYW 493
>AV773273
Length = 356
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 641 LAIAYGLMKMPSPAPI-RIIKNLRMCDDCHTA-VKLISKVTNRFIIVRDANRFHHF 694
LAIAYGL + A + ++ R+C DCH + + R +IVRD RFHHF
Sbjct: 354 LAIAYGLT*YSTHAHLLESLRTFRVCGDCHNRHSRSCPGLVGRELIVRDNKRFHHF 187
Score = 28.9 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (57%)
Frame = -1
Query: 675 ISKVTNRFIIVRDANRFHHFRDGSCTCADHW 705
+S++TN FII +D G C+C D+W
Sbjct: 218 LSEITNAFIISQD---------GKCSCGDYW 153
>TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-like,
partial (4%)
Length = 560
Score = 38.9 bits (89), Expect = 0.003
Identities = 35/136 (25%), Positives = 66/136 (47%), Gaps = 7/136 (5%)
Frame = -3
Query: 309 LQNRYFEETLDLLTCMDQEDTL-PNECTFKVLLGACAGIALLKHGDLLHARLEKLGF-KN 366
L R T + T ++ TL + T L C+ + LK +HAR+ + GF +N
Sbjct: 429 LNRRSATSTTAVCTMSPKDATLWKAQQTLMTLFNRCSTMNHLKE---IHARIYQTGFHQN 259
Query: 367 YVIVNNALI--NMYSKSGDIDSSYNVFSDTMCRDVTTWNSMICGYSHHGLGQEALRVFQD 424
+++V ++ + +GD++ + +VF D WN+MI G+ + ++A+ ++
Sbjct: 258 HLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKR 79
Query: 425 MKSAGES---PNNVTF 437
M+ GE P+ TF
Sbjct: 78 MQQ-GEPHVVPDTFTF 34
Score = 35.8 bits (81), Expect = 0.024
Identities = 21/96 (21%), Positives = 44/96 (44%)
Frame = -3
Query: 40 KAIHAQLLVRDQASKRSDVVQLNSLIHLYVKCGRLRLARSMFDKMPLRDVFSWNDLMTGY 99
K IHA++ V ++ + V G + A S+FD++ D F WN ++ G+
Sbjct: 303 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 124
Query: 100 MHSGNYLEVLVLFKNLVSSSTTQHACPNEYVFTTVL 135
++ + ++ +K + H P+ + F+ +L
Sbjct: 123 GNTNQPEKAVLFYKRMQQGE--PHVVPDTFTFSFLL 22
>AV767495
Length = 586
Score = 36.6 bits (83), Expect = 0.014
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 297 NVVVWTSLMSAYLQNRYFEETLDLLTCMDQEDTLPNECTFKVLLGACAGIALLKHG--DL 354
+VV +++L+ A +N E ++ LL M ++ PN T+ ++ A ++ L+ G
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDTS 205
Query: 355 LHARLEKLGFKNYVIVNNALINMYSKSGDIDSSYNVF-------SDTMCRDVTTWNSMIC 407
+ A ++ + ++++ AL N+ D D +F S + +D+ C
Sbjct: 206 VQANEHRVVPSSSMLIDGALQNLAIGKED-DRIMKMFEQLAAEKSGQIKKDMRGSQDKFC 382
Query: 408 GYSHHGLGQEALRVFQDMKSAGESPNNVTFVGVLSACAH 446
L +F+ M PN VTF +L+AC++
Sbjct: 383 ----------ILWLFRKMHEMEIKPNVVTFSAILNACSN 469
>BP035488
Length = 534
Score = 36.6 bits (83), Expect = 0.014
Identities = 34/148 (22%), Positives = 67/148 (44%), Gaps = 6/148 (4%)
Frame = +3
Query: 87 RDVFSWNDLMTGYMHSGNYLEVLVLFKNLVSSSTTQHACPNEYVFTTVLSSCSHSGRVRE 146
RD+ +WN ++ G+ GN E ++K++++S P+ + + T + + + G++
Sbjct: 63 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR----PDLFTYATFIKALTKKGKLGT 230
Query: 147 GMQCHGYLFKYGLVSYQFVKSALFNMYARCL--HVNLALQVL-NTESGGDENDIFLYNSL 203
++ ++ G V + A C V AL+V + + G E ++ YNSL
Sbjct: 231 ALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 410
Query: 204 LNVLVESGRWE---EAIGVLRRMGNECM 228
+ L + R E E + + R CM
Sbjct: 411 IKHLCKIRRMEKVYELVEDMERKKGSCM 494
Score = 35.4 bits (80), Expect = 0.031
Identities = 33/127 (25%), Positives = 61/127 (47%), Gaps = 7/127 (5%)
Frame = +3
Query: 397 RDVTTWNSMICGYSHHGLGQEALRVFQDMKSAGESPN---NVTFVGVLSACAHLALVDKG 453
RD+ TWN ++ G+ G EA RV++D+ ++ P+ TF+ L+ L K
Sbjct: 63 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKL 242
Query: 454 LDYLYNEMKNHKIEPGLEHYTCMVVLYC-RAGLLEKAENF--MKTTKVKWDIVAWRTLL- 509
++NE N K P + C++ C + + E E F MK + ++ + +L+
Sbjct: 243 FRGMWNEGCNCK--PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 416
Query: 510 NSCRVHR 516
+ C++ R
Sbjct: 417 HLCKIRR 437
Score = 35.4 bits (80), Expect = 0.031
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = +3
Query: 375 INMYSKSGDIDSSYNVFSDTM-----CR-DVTTWNSMICGYSHHGLGQEALRVFQDMKSA 428
I +K G + ++ +F C+ DV N +I EAL VFQDMK
Sbjct: 195 IKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 374
Query: 429 GESPNNVTFVGVLSACAHLALVDKGLDYLYN-EMKNHKIEPGLEHYTCMV 477
G PN T+ ++ + ++K + + + E K P Y+C++
Sbjct: 375 GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 524
>AV417736
Length = 428
Score = 36.2 bits (82), Expect = 0.018
Identities = 28/118 (23%), Positives = 55/118 (45%), Gaps = 4/118 (3%)
Frame = +1
Query: 457 LYNEMKNHKIEPGLEHYTCMVVLYCRAGLLEKAENFMKTTK---VKWDIVAWRTLLNSCR 513
++N+M IEP + Y+ + Y R+G KAE + + + ++ ++V + T+++
Sbjct: 16 IFNDMVKAGIEPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTTIISGWC 195
Query: 514 VHRNYDLGKRIAESILQMD-PQDMGTYTLLSNMHATANMWDGVVEIRKMMKERNIKKE 570
D R+ E + +M P ++ TY L + A E+ M+ER + E
Sbjct: 196 TAGKMDRAVRLHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEELLVTMEERGVAPE 369
>AV766731
Length = 576
Score = 36.2 bits (82), Expect = 0.018
Identities = 30/127 (23%), Positives = 56/127 (43%), Gaps = 5/127 (3%)
Frame = -3
Query: 369 IVNNALINMYSKSGDIDSSYNVFSDTMCR-----DVTTWNSMICGYSHHGLGQEALRVFQ 423
+ N+LIN K+ I + + D M D+ T NS+ G H L +A+ +F
Sbjct: 544 VKKNSLINGLCKARRISCAVELV-DVMHETGPPADLITTNSLFDGLCKHHLLDKAIALFM 368
Query: 424 DMKSAGESPNNVTFVGVLSACAHLALVDKGLDYLYNEMKNHKIEPGLEHYTCMVVLYCRA 483
+K PN + ++ + + K ++ + + + YT M+ YC+
Sbjct: 367 KVKDPKIQPNIPPYPVIIDGLCKVGRL-KIAQEIFQVLLSEGYNLNVMTYTVMINGYCKE 191
Query: 484 GLLEKAE 490
GLL++A+
Sbjct: 190 GLLDEAQ 170
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,457,529
Number of Sequences: 28460
Number of extensions: 193543
Number of successful extensions: 859
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of query: 705
length of database: 4,897,600
effective HSP length: 97
effective length of query: 608
effective length of database: 2,136,980
effective search space: 1299283840
effective search space used: 1299283840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0141.1