TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0137.5
         (214 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9155 homologue to UP|Q949G5 (Q949G5) Mob1-like protein, complete    436  e-123
BP043317                                                              239  2e-64
BP037058                                                               47  3e-06
TC16622 similar to UP|Q8L759 (Q8L759) Expressed protein (At5g576...    28  1.2
TC16551 similar to UP|Q9SEZ7 (Q9SEZ7) CBL-interacting protein ki...    26  4.6
BP062104                                                               26  6.0
CB826709                                                               26  6.0
TC8540 similar to GB|AAM16209.1|20334906|AY094053 AT5g02020/T7H2...    25  7.8

>TC9155 homologue to UP|Q949G5 (Q949G5) Mob1-like protein, complete
          Length = 1087

 Score =  436 bits (1120), Expect = e-123
 Identities = 213/215 (99%), Positives = 213/215 (99%), Gaps = 1/215 (0%)
 Frame = +1

Query: 1   MSLFGLG-RNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAV 59
           MSLFGLG RNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAV
Sbjct: 214 MSLFGLGSRNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAV 393

Query: 60  NTVDFFNQVNILFGTLTEFCTPSNCPSMTAGPKYEYRWADGVTIKKPIEVSAPKYVEYLM 119
           NTVDFFNQVNILFGTLTEFCTPSNCPSMTAGPKYEYRWADGVTIKKPIEVSAPKYVEYLM
Sbjct: 394 NTVDFFNQVNILFGTLTEFCTPSNCPSMTAGPKYEYRWADGVTIKKPIEVSAPKYVEYLM 573

Query: 120 DWIESQLDDETIFPQKLGAPFPPNFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHL 179
           DWIESQLDDETIFPQKLGAPFPP FRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHL
Sbjct: 574 DWIESQLDDETIFPQKLGAPFPPXFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHL 753

Query: 180 NTCFKHFVLFTWEFRLIDKAELAPLEDLVDSIIQL 214
           NTCFKHFVLFTWEFRLIDKAELAPLEDLVDSIIQL
Sbjct: 754 NTCFKHFVLFTWEFRLIDKAELAPLEDLVDSIIQL 858


>BP043317 
          Length = 448

 Score =  239 bits (611), Expect = 2e-64
 Identities = 111/126 (88%), Positives = 121/126 (95%)
 Frame = -3

Query: 1   MSLFGLGRNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAVN 60
           MSLFGLGRNQ+TFRPKKS PSGSKGAQL+KHIDATLGSGNLREAVKLPPGED+NEWLAVN
Sbjct: 380 MSLFGLGRNQRTFRPKKSTPSGSKGAQLRKHIDATLGSGNLREAVKLPPGEDLNEWLAVN 201

Query: 61  TVDFFNQVNILFGTLTEFCTPSNCPSMTAGPKYEYRWADGVTIKKPIEVSAPKYVEYLMD 120
           TVDFFNQVN+L+GTLTEFCT  NC +M+AGPKYEYRWADGV IK+PIEV+APKYVEYLMD
Sbjct: 200 TVDFFNQVNLLYGTLTEFCTAENCRTMSAGPKYEYRWADGVQIKRPIEVTAPKYVEYLMD 21

Query: 121 WIESQL 126
           WIE+QL
Sbjct: 20  WIETQL 3


>BP037058 
          Length = 544

 Score = 46.6 bits (109), Expect = 3e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -2

Query: 192 EFRLIDKAELAPLEDLVDSIIQL 214
           EFRLIDKAELAPLEDLVDSIIQL
Sbjct: 258 EFRLIDKAELAPLEDLVDSIIQL 190


>TC16622 similar to UP|Q8L759 (Q8L759) Expressed protein (At5g57655),
          partial (37%)
          Length = 649

 Score = 28.1 bits (61), Expect = 1.2
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +1

Query: 34 ATLGSGNLREAVKLPPGE 51
          A++G GNLRE++K+ PGE
Sbjct: 73 ASMG*GNLRESMKMKPGE 126


>TC16551 similar to UP|Q9SEZ7 (Q9SEZ7) CBL-interacting protein kinase 16,
           partial (5%)
          Length = 543

 Score = 26.2 bits (56), Expect = 4.6
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = -1

Query: 40  NLREAVKLPPGEDINEWLAVNTVDFFNQVNILFGTLTEFCTPSNCPSMTAGPKYEYRWAD 99
           N RE + +P  E  N  L+ +T  +FN  +I +     F  PS   S   GP++ Y W  
Sbjct: 261 NQRENLLVP*VEAPNSTLSRST*LYFNITHI-YHCHFNFTKPSI--ST*LGPRHHYTWHA 91

Query: 100 GVTIKKPIEV 109
            +T+ +P  V
Sbjct: 90  LLTLPRPNNV 61


>BP062104 
          Length = 321

 Score = 25.8 bits (55), Expect = 6.0
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = -2

Query: 136 LGAPFPPNFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFVLFTWEFR 194
           L  PF  +   +V  IF +L R    +YH+ F +             F HF++ T+  R
Sbjct: 170 LETPFSLDSSSLVGAIFNKLSRSSVPMYHTAFSE------------SFTHFIIVTFSAR 30


>CB826709 
          Length = 432

 Score = 25.8 bits (55), Expect = 6.0
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +3

Query: 98  ADGVTIKKPIEVSAPKYVEYLMDWIESQLDDETI 131
           ++G  I + +++    Y+E + D +E Q+DD+ +
Sbjct: 246 SEGAEIDERVDLDEENYMEEMDDDVEEQVDDDGV 347


>TC8540 similar to GB|AAM16209.1|20334906|AY094053 AT5g02020/T7H20_70
           {Arabidopsis thaliana;}, partial (17%)
          Length = 607

 Score = 25.4 bits (54), Expect = 7.8
 Identities = 9/26 (34%), Positives = 18/26 (68%)
 Frame = +2

Query: 185 HFVLFTWEFRLIDKAELAPLEDLVDS 210
           HFV + + F+L+D+ ++   ++LV S
Sbjct: 200 HFVSYIYRFKLVDRRKMEGRKNLVSS 277


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.321    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,840,768
Number of Sequences: 28460
Number of extensions: 52155
Number of successful extensions: 284
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of query: 214
length of database: 4,897,600
effective HSP length: 86
effective length of query: 128
effective length of database: 2,450,040
effective search space: 313605120
effective search space used: 313605120
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)