BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0137.1
(630 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP030148 68 5e-12
BF177509 65 3e-11
BP072317 50 8e-07
BP036178 46 2e-05
AV425218 43 1e-04
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 43 1e-04
TC20129 homologue to GB|AAF04891.1|6175165|ATAC011437 Mutator-li... 42 2e-04
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 42 3e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 40 0.001
BP083536 39 0.002
TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%) 39 0.003
TC7889 similar to UP|Q40336 (Q40336) Proline-rich cell wall prot... 39 0.003
AV415611 39 0.003
TC18180 weakly similar to GB|AAF04891.1|6175165|ATAC011437 Mutat... 38 0.004
AV410336 37 0.007
BP049972 37 0.007
TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich ... 37 0.010
AV406521 29 0.010
TC10928 weakly similar to PIR|G96668|G96668 protein F1N19.7 [imp... 37 0.013
TC17953 similar to GB|AAM26637.1|20855902|AY101516 AT3g06940/F17... 37 0.013
>BP030148
Length = 398
Score = 67.8 bits (164), Expect = 5e-12
Identities = 40/129 (31%), Positives = 71/129 (55%)
Frame = +3
Query: 261 RWIFISDQQKGLLSVFDELMPGVEHRFCLRHLYANFKKKFGGGVVIRDLMMQAAKATYVH 320
R +SD+QKG++ + P H FC+RHL +F+K+F +++ +L+ +AA V
Sbjct: 18 RLTILSDRQKGIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNTMLV-NLLWEAAHVLTVI 194
Query: 321 LFEEKMRELKEVNEEAHDWLMTHPKKSWCKHAFTLYPKCDVLMNNLSEAFNATILLARDK 380
FE K+ E++E++++A W+ P + W A+ + L N+ E+ + IL A
Sbjct: 195 EFESKILEIEEISQDAAYWIRRIPPRLWAT-AYFEGQRFGHLTANIVESLDTWILDASGL 371
Query: 381 PILTMIDWI 389
PI+ M + I
Sbjct: 372 PIVQMTECI 398
>BF177509
Length = 472
Score = 65.5 bits (158), Expect = 3e-11
Identities = 43/140 (30%), Positives = 66/140 (46%)
Frame = +1
Query: 339 WLMTHPKKSWCKHAFTLYPKCDVLMNNLSEAFNATILLARDKPILTMIDWIRSYLMGRFA 398
W+ P + W A+ + L N+ E+ N IL A PI+ M++ IR LM F
Sbjct: 19 WIRRIPPRLWAT-AYFEGQRFGHLTANIVESLNTWILEASGLPIIQMMECIRRQLMTWFN 195
Query: 399 ALNEKFQRYNHPFMPKPLKRLAWETKSSNNWVPQACGHAKYEVKSVLDGDQFIVDLRQRS 458
E ++ +P + +A + + + A++EV S + IVD+R R
Sbjct: 196 ERRETSMQWASILVPSAERCVAEALERARTYQVLRANEAEFEVISHEGSN--IVDIRNRC 369
Query: 459 CTCNWWDLVGIPCRHAVAAI 478
C C W L G+PC HAVAA+
Sbjct: 370 CLCRGWQLYGLPCAHAVAAL 429
>BP072317
Length = 436
Score = 50.4 bits (119), Expect = 8e-07
Identities = 23/39 (58%), Positives = 28/39 (70%)
Frame = +3
Query: 412 MPKPLKRLAWETKSSNNWVPQACGHAKYEVKSVLDGDQF 450
MPKPLKRLAWE K ++N +PQA G YEVK V+ + F
Sbjct: 318 MPKPLKRLAWEVKGTSNGLPQASGEGLYEVKHVVTLEGF 434
>BP036178
Length = 561
Score = 45.8 bits (107), Expect = 2e-05
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Frame = -2
Query: 498 YQATYAHGITPINGKRMWPY-----------TPDAPILPPLYKRKPGRPKKLRRRDPHED 546
Y+ Y+ I PI + W D I PP +R PGRPKK R
Sbjct: 560 YRMAYSQIIIPIPDRSQWREHGEGAEGVGGARVDIVIRPPKTRRPPGRPKKKVLR----- 396
Query: 547 DTDEGSRPNSRHRCGRCGTIGHNIRTCTNP 576
+ RP +CGRC +GH+ + CT P
Sbjct: 395 -VENFKRPKRIVQCGRCHMLGHSQKKCTMP 309
>AV425218
Length = 419
Score = 43.1 bits (100), Expect = 1e-04
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +2
Query: 217 LLCAVGRDPNDQYFPIAFAVVESECKESWKWFLELLLADIGGLRRWIFISDQQKGLLSVF 276
L VG + + Q A++ SE ES+ W + LL + G+ I+D + +
Sbjct: 8 LATLVGVNHHGQSVLFGCALLSSEDSESFVWLFQSLLHCMSGVPPQGIITDHSEAMKKAI 187
Query: 277 DELMPGVEHRFCLRHLYANFKKKFGGGVVIRDLMMQAAKATY-VHLFEEKMRELKEVNE- 334
+ ++P HR+CL ++ +K G + Y + +E R K++ E
Sbjct: 188 ETVLPSTRHRWCLSYIMKKLPQKLLGYAQYESIRHHLQNVVYDAVVIDEFERNWKKIVED 367
Query: 335 ---EAHDWL 340
E ++WL
Sbjct: 368 FGLEDNEWL 394
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 43.1 bits (100), Expect = 1e-04
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Frame = +1
Query: 563 CGTIGHNIRTCTN------PPTSQPTEDVPETEPTEAAQPPQQPTEAAQ-PPQQPTEATQ 615
CG + H + ++ PP+ QPT P T PT PP PT+ + PP P+ +T+
Sbjct: 25 CGLLLHTSSSSSSSYSPPPPPSQQPTHS-PSTSPTSTTTPPPSPTKVTENPPTAPSTSTK 201
Query: 616 -----------PPQPPTVAAQNP 627
PP P T Q P
Sbjct: 202 SPTSSASEEPSPPNPSTSTTQQP 270
Score = 33.9 bits (76), Expect = 0.081
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Frame = +1
Query: 518 TPDAPILPPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTNPP 577
T P P P + P ++E S PN T + T+PP
Sbjct: 130 TTTPPPSPTKVTENPPTAPSTSTKSPTSSASEEPSPPNPS-----TSTTQQPKHSPTSPP 294
Query: 578 TSQPTEDVPETEP-TEAAQPPQQPTEAAQ----PPQQPTEATQPPQPPT 621
S P+ P T+P T A P P A + PP P+ ++ PP T
Sbjct: 295 AS-PSPSPPSTKPPTAMASPSTSPLSATKSHPTPPAAPSASSTPPPTTT 438
>TC20129 homologue to GB|AAF04891.1|6175165|ATAC011437 Mutator-like
transposase {Arabidopsis thaliana;} , partial (12%)
Length = 588
Score = 42.4 bits (98), Expect = 2e-04
Identities = 28/89 (31%), Positives = 35/89 (38%), Gaps = 10/89 (11%)
Frame = +3
Query: 498 YQATYAHGITPINGKRMWPYTPDAP----------ILPPLYKRKPGRPKKLRRRDPHEDD 547
Y+ TY+ I PI K +W + I PP R PGRP+K R R
Sbjct: 27 YRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINPPKSLRPPGRPRKKRVR------ 188
Query: 548 TDEGSRPNSRHRCGRCGTIGHNIRTCTNP 576
++ R C RC GH TC P
Sbjct: 189 AEDRGRVKRVVHCSRCNQTGHFRTTCAAP 275
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Frame = +1
Query: 516 PYTPDAPILPPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTN 575
PYTP P P + P P + P + P++ I T T
Sbjct: 166 PYTPTPPKTPSPTSQPPYIPLPPKTPSPISQPPHVPTPPSTP------SPISQPPYTPTP 327
Query: 576 PPTSQPTEDVPETE-----PTEAAQPPQQPTEAAQPPQQPTEATQPPQPPT 621
P T PT P T P+ +QPP PT PP+ P+ QPP P+
Sbjct: 328 PKTPSPTSQPPHTPTPPNTPSPISQPPYTPT----PPKTPSPTNQPPHIPS 468
Score = 42.0 bits (97), Expect = 3e-04
Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Frame = +1
Query: 516 PYTPDAPILPPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTN 575
P+ P P P + P P + P + PN+ I T T
Sbjct: 262 PHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNTP------SPISQPPYTPTP 423
Query: 576 PPTSQPTEDVPET-EPTEAAQPPQQPTEAAQPPQQPTEATQPP 617
P T PT P P ++ P QP PP+ P+ +QPP
Sbjct: 424 PKTPSPTNQPPHIPSPPNSSSPTSQPPNTPSPPKTPSPTSQPP 552
Score = 33.9 bits (76), Expect = 0.081
Identities = 18/55 (32%), Positives = 25/55 (44%), Gaps = 8/55 (14%)
Frame = +1
Query: 575 NPPT--SQPTEDVPETEPTEAAQPPQQPTEAAQ------PPQQPTEATQPPQPPT 621
+PP S P P P PP+ P+ +Q PP+ P+ +QPP PT
Sbjct: 112 SPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPISQPPHVPT 276
Score = 33.1 bits (74), Expect = 0.14
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 TNPPTSQPTEDVPETE-PTEAAQPPQQPTEAAQPPQQPTEATQPPQPPT 621
T P T P P T P + P P PP+ P+ PP PT
Sbjct: 34 TPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPT 180
Score = 31.6 bits (70), Expect = 0.40
Identities = 15/46 (32%), Positives = 20/46 (42%), Gaps = 1/46 (2%)
Frame = +1
Query: 576 PPTSQPTEDVPET-EPTEAAQPPQQPTEAAQPPQQPTEATQPPQPP 620
P T P+ P P +A P P PP+ P+ +QPP P
Sbjct: 88 PKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIP 225
Score = 26.9 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 15/31 (47%)
Frame = +1
Query: 590 PTEAAQPPQQPTEAAQPPQQPTEATQPPQPP 620
P+ PP PT PP+ P+ QPP P
Sbjct: 1 PSPVYTPPSIPT----PPKTPSPGNQPPHTP 81
Score = 26.9 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 19/44 (42%)
Frame = +1
Query: 586 PETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNPVV 629
P P PP+ P+ QPP P PP+ P+ + P V
Sbjct: 7 PVYTPPSIPTPPKTPSPGNQPPHTPI----PPKTPSPSYSPPNV 126
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 6/63 (9%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQ---PTEATQPP---QPPTVAAQNP 627
+N PT+ P P T AAQ P +++ PP Q P +T PP PP V++ P
Sbjct: 194 SNSPTTSPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPP 373
Query: 628 VVS 630
V S
Sbjct: 374 VQS 382
Score = 32.0 bits (71), Expect = 0.31
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNPVVS 630
++PP +Q + ++ P A+ PP P +++ PP Q PP A+ P S
Sbjct: 260 SSPPPAQSSPPPVQSSPPPASTPP--PAQSSPPPVSSPPPVQSTPPPAPASTPPPAS 424
Score = 31.2 bits (69), Expect = 0.53
Identities = 15/54 (27%), Positives = 22/54 (39%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNP 627
++PP + + P ++ PP Q T P P A+ PP P A P
Sbjct: 302 SSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPP 463
Score = 31.2 bits (69), Expect = 0.53
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNP 627
+ PP +Q + + P + PP P P P + P PP AA P
Sbjct: 320 STPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPP 481
Score = 30.4 bits (67), Expect = 0.90
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQ--QPTEATQP-PQPPTVAAQNP 627
+ PP + + P + P + P P AA PP P AT P P P V +++P
Sbjct: 380 STPPPAPASTPPPASPPPFSPPPATPPPPAATPPPALTPVPATSPAPAPAKVKSKSP 550
Score = 29.6 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 22/55 (39%)
Frame = +2
Query: 576 PPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNPVVS 630
PP S P P + T P P A+ PP P AT PP A P ++
Sbjct: 350 PPVSSP----PPVQSTPPPAPASTPPPASPPPFSPPPATPPPP---AATPPPALT 493
Score = 28.1 bits (61), Expect = 4.4
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +2
Query: 574 TNPPTSQPTEDVPETEPTEAAQPP---QQPTEAAQPPQQPTEATQPPQPP 620
++PP Q + T P + PP P + PP P P PP
Sbjct: 281 SSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPP 430
>BP083536
Length = 377
Score = 39.3 bits (90), Expect = 0.002
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 457 RSCTCNWWDLVGIPCRHAVAAISF 480
++C CN W+LV IPCRHA+A + +
Sbjct: 301 KACCCNLWELVEIPCRHALAGVHY 372
>TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%)
Length = 799
Score = 38.9 bits (89), Expect = 0.003
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 574 TNPPTSQPTEDVPETE-PTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNPVVS 630
T P T PT P T+ P P QP + PP+ + +QPP T A P+ S
Sbjct: 76 TPPNTHSPTSQPPNTQTPANTPSPSSQPPYLSTPPKSNSPTSQPPVAQTPRAVTPISS 249
Score = 30.4 bits (67), Expect = 0.90
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +1
Query: 571 RTCTNPPTSQPTEDV-PETEPTEAAQPPQQPTEAAQPPQQPTEATQP---PQPP 620
RT P T P + P ++P A PP + +QPP T A P QPP
Sbjct: 1 RTSQPPYTPAPIKPPSPTSQPPYIATPPNTHSPTSQPPNTQTPANTPSPSSQPP 162
Score = 28.1 bits (61), Expect = 4.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 578 TSQPTEDVPETE-PTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVA 623
TSQP P T P + P QP A PP + +QPP T A
Sbjct: 4 TSQP----PYTPAPIKPPSPTSQPPYIATPPNTHSPTSQPPNTQTPA 132
>TC7889 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
partial (66%)
Length = 1158
Score = 38.9 bits (89), Expect = 0.003
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +1
Query: 576 PPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPT 621
PPT P P T PP PTE PP P + PP PT
Sbjct: 397 PPTPTPPIVTPPTPTPPVVTPPSPPTETPCPPPPPVVPSPPPAQPT 534
Score = 34.7 bits (78), Expect = 0.048
Identities = 17/52 (32%), Positives = 18/52 (33%)
Frame = +1
Query: 576 PPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNP 627
P P P T PP PP PTE PP PP V + P
Sbjct: 367 PVVPSPPIVTPPTPTPPIVTPPTPTPPVVTPPSPPTETPCPPPPPVVPSPPP 522
Score = 28.1 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 17/47 (35%)
Frame = +1
Query: 576 PPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTV 622
PP +P VP+ P+ P PP P P PP V
Sbjct: 79 PPVVKPPPYVPKPPVVSPPYVPKPPVVPVTPPYVPKPPVVPVTPPYV 219
>AV415611
Length = 219
Score = 38.5 bits (88), Expect = 0.003
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 451 IVDLRQRSCTCNWWDLVGIPCRHAVAAI 478
+VD+ + C+C W L G+PC HA+A I
Sbjct: 108 VVDIDRWECSCKTWQLTGVPCCHAIAVI 191
>TC18180 weakly similar to GB|AAF04891.1|6175165|ATAC011437 Mutator-like
transposase {Arabidopsis thaliana;} , partial (4%)
Length = 513
Score = 38.1 bits (87), Expect = 0.004
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 488 YIDSYYGRDAYQATYAHGITPINGKRMWPYTPDAPIL---PPLYKRKPGRPKKLRRRDPH 544
Y Y ++Y+ TY+ + PI + P++ PP +R PGRP R
Sbjct: 15 YCSRYCTTESYRLTYSERVNPIPIMAVPESKDSQPVVTVTPPFTRRPPGRPATKRY---- 182
Query: 545 EDDTDEGSRPNSRHRCGRCGTIGHNIRTC 573
+ H C RC +GHN TC
Sbjct: 183 ---VSQNIVKRELH-CSRCKGLGHNKSTC 257
>AV410336
Length = 358
Score = 37.4 bits (85), Expect = 0.007
Identities = 27/106 (25%), Positives = 37/106 (34%)
Frame = +1
Query: 516 PYTPDAPILPPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTN 575
P T + PP + P P + T P+S T T T+
Sbjct: 34 PTTSTSSTAPPPHAPPPPTPNP--KSPSSSSPTPTSPSPHSGRNSSPATT---TFTTSTS 198
Query: 576 PPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPT 621
PT P +P T A+ P++PT Q P A+ PP T
Sbjct: 199 TPTPPPPSSLPAASSTAASLLPKKPTAPPQHSSPPPAASSPPPSST 336
Score = 30.8 bits (68), Expect = 0.69
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 568 HNIRTCTNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEATQPPQPPTVAAQNP 627
H+ R + T+ T T P ++ P T A+ P++PT Q PP A+ P
Sbjct: 145 HSGRNSSPATTTFTTSTSTPTPPPPSSLPAASSTAASLLPKKPTAPPQHSSPPPAASSPP 324
>BP049972
Length = 496
Score = 37.4 bits (85), Expect = 0.007
Identities = 28/108 (25%), Positives = 39/108 (35%), Gaps = 19/108 (17%)
Frame = -1
Query: 488 YIDSYYGRDAYQATYAHGITPINGKRMW-------------------PYTPDAPILPPLY 528
+ +S + Y+ TY+ I PI + W + + I PP
Sbjct: 490 FTESCFTVATYRKTYSQTIHPIPDRSFWNELSIEDANANKAVEDANASQSIEIVINPPKS 311
Query: 529 KRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTNP 576
R PGRP+K R R ++ R C RC GH TC P
Sbjct: 310 LRPPGRPRKKRVR------AEDRGRVKRVVHCSRCNQTGHFRTTCAAP 185
>TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich RNA binding
protein 7 {Arabidopsis thaliana;} , partial (19%)
Length = 483
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/128 (25%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Frame = +2
Query: 503 AHGITPINGKRMWPYTPDAPIL--PPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRC 560
A + P + R P T A + PP P P L + S P+S
Sbjct: 56 ATAVNPTSASRSSPTTAPASLSLSPPPQPSNPPPPPPLPPPEMPSSPATLKSSPSSATAT 235
Query: 561 GRCGTIGHNIRTCTNPPTSQPTEDVPETEPTEAAQPPQQPTEAAQPPQQPTEA--TQPPQ 618
T T PP++ P P AA P + T +A PP PT + T P +
Sbjct: 236 AAPST---KSTTSPPPPSTL*KSSTPAPTPPRAAVPSPKSTSSAAPPTAPTSSGTTAPSK 406
Query: 619 PPTVAAQN 626
P +Q+
Sbjct: 407 NPPATSQS 430
>AV406521
Length = 267
Score = 28.9 bits (63), Expect(2) = 0.010
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 232 IAFAVVESECKESWKWFL----ELLLADIGGLRRWIFISDQQKGL 272
+AF VV+ E ++W WF + L A + + F+SD Q+G+
Sbjct: 1 LAFGVVDVENDDNWTWFRSELHKALEASTESMPQMGFLSDGQRGI 135
Score = 26.9 bits (58), Expect(2) = 0.010
Identities = 15/48 (31%), Positives = 24/48 (49%)
Frame = +3
Query: 270 KGLLSVFDELMPGVEHRFCLRHLYANFKKKFGGGVVIRDLMMQAAKAT 317
KG ++ H FC+RHL + K+F ++ L+ +AA AT
Sbjct: 126 KGYYRRSEDEFSNSSHTFCMRHLSESIGKEFKNSRLVH-LLWKAAYAT 266
>TC10928 weakly similar to PIR|G96668|G96668 protein F1N19.7 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(29%)
Length = 590
Score = 36.6 bits (83), Expect = 0.013
Identities = 28/86 (32%), Positives = 34/86 (38%)
Frame = -3
Query: 543 PHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTNPPTSQPTEDVPETEPTEAAQPPQQPTE 602
PH + S P S H + H+ + PT PT P T PT P Q
Sbjct: 426 PHHTHHNHISLPLSPH-------VSHS----RSDPTD-PTHSAPPTPPTRPNTSPSQTPS 283
Query: 603 AAQPPQQPTEATQPPQPPTVAAQNPV 628
AA PP PP PP AA +P+
Sbjct: 282 AAAPP--------PPPPPPPAAPSPL 229
>TC17953 similar to GB|AAM26637.1|20855902|AY101516 AT3g06940/F17A9_9
{Arabidopsis thaliana;}, partial (6%)
Length = 527
Score = 36.6 bits (83), Expect = 0.013
Identities = 21/65 (32%), Positives = 28/65 (42%), Gaps = 1/65 (1%)
Frame = +3
Query: 519 PDAPILPPLYKRKPGRPKKLRRRDPHEDDTDEGSRPNSRHRCGRCGTIGHNIRTCTNP-P 577
P + PP KR PGRPK + + +C +C +GHN +TC N P
Sbjct: 24 PAVTVTPPPTKRPPGRPKM--------KPVESIDMIKRQLQCSKCKELGHNKKTCKNSLP 179
Query: 578 TSQPT 582
Q T
Sbjct: 180 LEQDT 194
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,256,734
Number of Sequences: 28460
Number of extensions: 229453
Number of successful extensions: 3527
Number of sequences better than 10.0: 319
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2998
length of query: 630
length of database: 4,897,600
effective HSP length: 96
effective length of query: 534
effective length of database: 2,165,440
effective search space: 1156344960
effective search space used: 1156344960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0137.1