TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0136.12
         (245 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14324 weakly similar to UP|Q8LEE9 (Q8LEE9) Arabinogalactan pro...   479  e-136
TC8264 similar to GB|AAK20861.1|13377784|AF333974 fasciclin-like...   184  2e-47
TC18106 similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan protein-li...   147  2e-36
TC9626 weakly similar to UP|Q8LEE9 (Q8LEE9) Arabinogalactan prot...   142  4e-35
AV771016                                                              103  6e-27
TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like arabinogalac...   101  1e-22
TC15809 weakly similar to PIR|JN0747|JN0747 histone H1-I - Volvo...    99  7e-22
TC14679 similar to UP|FLA7_ARATH (Q9SJ81) Fasciclin-like arabino...    98  1e-21
TC9037 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-like...    94  2e-20
TC13019                                                                85  1e-17
AV771048                                                               57  2e-17
TC14342 weakly similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan pro...    82  6e-17
TC12375 weakly similar to GB|AAA59989.1|189479|HUMP53T p53 cellu...    79  7e-16
TC14428 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan pro...    79  9e-16
AV413145                                                               76  6e-15
AI967375                                                               76  6e-15
TC14429 weakly similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan pro...    65  8e-12
AV772472                                                               45  5e-09
TC17034                                                                56  6e-09
AV775636                                                               40  4e-08

>TC14324 weakly similar to UP|Q8LEE9 (Q8LEE9) Arabinogalactan protein-like,
           partial (63%)
          Length = 1172

 Score =  479 bits (1234), Expect = e-136
 Identities = 244/245 (99%), Positives = 244/245 (99%)
 Frame = +3

Query: 1   MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQ 60
           MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQ
Sbjct: 102 MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQ 281

Query: 61  VATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNF 120
           VATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNF
Sbjct: 282 VATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNF 461

Query: 121 DTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLL 180
           DTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLL
Sbjct: 462 DTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLL 641

Query: 181 PRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVA 240
           PRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPL VAMVVVA
Sbjct: 642 PRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLPVAMVVVA 821

Query: 241 AFSSW 245
           AFSSW
Sbjct: 822 AFSSW 836



 Score = 26.9 bits (58), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (54%), Gaps = 2/38 (5%)
 Frame = -3

Query: 190 PAPAPAPEKAKASKKKSADDTEGPA--GDDSAAVSVKQ 225
           P+P+PAPE A A+ ++ + + E P   G   A    KQ
Sbjct: 702 PSPSPAPEPAPAA*QRRSHEGEAPCLLGKPQAGYQSKQ 589


>TC8264 similar to GB|AAK20861.1|13377784|AF333974 fasciclin-like
           arabinogalactan-protein 9 {Arabidopsis thaliana;},
           partial (38%)
          Length = 942

 Score =  184 bits (466), Expect = 2e-47
 Identities = 99/223 (44%), Positives = 134/223 (59%)
 Frame = +3

Query: 8   LPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINA 67
           L L+ L F     + + A +PAPAPS  P ++  IL+KAG YTTLIRLL+ +Q  TQI +
Sbjct: 36  LALILLTFLSLFASKIQAQAPAPAPSG-PVNLTAILEKAGQYTTLIRLLKESQQLTQIES 212

Query: 68  QLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPV 127
           QL ++  G T FAP DNAF NLK G +N L D QK +LI +H+ P + S+S+  T+SNPV
Sbjct: 213 QLNSTTQGFTLFAPTDNAFQNLKSGAINDLTDDQKVKLILYHVTPKYYSLSDLQTVSNPV 392

Query: 128 RTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVA 187
           RTQA E      LN    GN VN+TTG+V  ++   +     LA+YQVD+VLLP + F A
Sbjct: 393 RTQASEKEGSWGLNFKGQGNQVNVTTGVVTTSINNDLRQQFPLAIYQVDRVLLPLELFGA 572

Query: 188 KPPAPAPAPEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWG 230
           K P+ AP+P+ ++ +       +    G  S A S K   V G
Sbjct: 573 KSPSSAPSPKSSETTPSDETPSSGKKGGAPSPAASQKDNGVAG 701


>TC18106 similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan protein-like, partial
           (42%)
          Length = 436

 Score =  147 bits (370), Expect = 2e-36
 Identities = 78/130 (60%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +3

Query: 8   LPLLAL-MFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQIN 66
           LPLL L MF F   T  A ++ APAP+  PT+I +IL+KAG +TT I++L+ TQVA +IN
Sbjct: 36  LPLLLLNMFLFLFQTISAQTAAAPAPAG-PTNITQILEKAGQFTTFIKILKATQVADRIN 212

Query: 67  AQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNP 126
           +QL NSN GLT FAP DNAFS+LKPG LNS+N Q + +LIQFH+LPT  SMS F+T SNP
Sbjct: 213 SQLNNSNQGLTIFAPTDNAFSSLKPGTLNSINTQDQLQLIQFHILPTLYSMSQFETASNP 392

Query: 127 VRTQAGENPD 136
           + TQAG + D
Sbjct: 393 LHTQAGNSGD 422


>TC9626 weakly similar to UP|Q8LEE9 (Q8LEE9) Arabinogalactan protein-like,
           partial (24%)
          Length = 605

 Score =  142 bits (359), Expect = 4e-35
 Identities = 82/176 (46%), Positives = 107/176 (60%), Gaps = 31/176 (17%)
 Frame = +1

Query: 6   FTLPLLALMFFFHSTTTLAASSPAPAPSSSPT---------------------------- 37
           F+L L A +FF    TT++A SPA +P  SP                             
Sbjct: 88  FSLLLFAPIFF----TTISAQSPAASPKKSPAKPSPASLAPAPAKPLVPSLPQSPSSDSS 255

Query: 38  --DIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS-NAGLTFFAPNDNAFSNLKPGFL 94
             DII+IL+KA  + TLIRLL+TTQ+  Q+NAQL+ + N GLT  AP+D AFS LK G+ 
Sbjct: 256 GQDIIKILRKAKSFNTLIRLLKTTQIINQVNAQLVTTKNGGLTILAPDDGAFSQLKAGYF 435

Query: 95  NSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVN 150
           NSL+ +Q+ ELIQFH+LP +VS SNFD LSNPV T A ++P    +NVT+ GN+VN
Sbjct: 436 NSLDGRQQKELIQFHVLPQYVSSSNFDALSNPVLTLASDSPKGYQINVTAYGNSVN 603


>AV771016 
          Length = 506

 Score =  103 bits (256), Expect(2) = 6e-27
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = -3

Query: 164 VYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAG 215
           VYSDNQL VY VDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAG
Sbjct: 504 VYSDNQLPVYLVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAG 349



 Score = 33.5 bits (75), Expect(2) = 6e-27
 Identities = 15/17 (88%), Positives = 16/17 (93%)
 Frame = -1

Query: 225 QRLVWGPLAVAMVVVAA 241
           +RLVWGPL VAMVVVAA
Sbjct: 317 ERLVWGPLPVAMVVVAA 267


>TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
           arabinogalactan-protein 2, partial (69%)
          Length = 1527

 Score =  101 bits (252), Expect = 1e-22
 Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
 Frame = +1

Query: 25  ASSPAPAPSSSPTDI--IRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPN 82
           +S+ A AP+++P+DI  I I+ K G       LL+T++          N N GLT F P 
Sbjct: 586 SSADAEAPTAAPSDIDVISIMSKQG-CKAFADLLRTSKALPTFKE---NVNGGLTVFCPT 753

Query: 83  DNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNV 142
           D+A +   P + N L D QK  L+ +H +P + S+    + +  + T A E  ++    V
Sbjct: 754 DSAVNGFLPKYKN-LTDSQKVSLLLYHGVPVYQSLQMLKSNNGIMNTLATEGANKYDFTV 930

Query: 143 TSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFF-------VAKPPAPAPA 195
            + G  VN+ T +    + G++   +   VY++ KVL+PR+ F       V+   +P PA
Sbjct: 931 QNDGEDVNLETKVNTAGIIGTLIDQDPFVVYKISKVLMPRELFKGVTEKTVSPAESPKPA 1110

Query: 196 PEKAKASKKKSADD------TEGPAGDDS 218
            +K+K++KK +ADD       +GPA DDS
Sbjct: 1111KKKSKSTKKGNADDDAADSPADGPADDDS 1197


>TC15809 weakly similar to PIR|JN0747|JN0747 histone H1-I - Volvox carteri
           {Volvox carteri;}, partial (10%)
          Length = 526

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 53/107 (49%), Positives = 73/107 (67%), Gaps = 13/107 (12%)
 Frame = +2

Query: 22  TLAASSPAPAP------------SSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQL 69
           T  A++P+P P             S+P DI +IL+KA  ++ LIRLL+TT++   IN+QL
Sbjct: 206 TPKATAPSPKPLVPTLPQSPDSSDSTPDDITKILRKAKIFSVLIRLLKTTEIMNNINSQL 385

Query: 70  INS-NAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFV 115
           I + N G+T  AP+D+AFS+LK GFLNSLN+ QK EL QFH+LP +V
Sbjct: 386 ITAKNGGITILAPDDSAFSHLKAGFLNSLNENQKIELCQFHILPQYV 526


>TC14679 similar to UP|FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan
           protein 7 precursor, partial (50%)
          Length = 724

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
 Frame = +2

Query: 75  GLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGEN 134
           G+T F P D++FS LK   L+ L   Q  ++I FH LP + S+++F  LS     Q G  
Sbjct: 8   GITIFVPKDSSFSALKKPSLSKLTSDQLKQVILFHALPKYYSLADFKNLS-----QTGST 172

Query: 135 P----DRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFF---VA 187
           P       +LN T    TV++ +G     V  +V+S + +A+Y+V KVLLP   F   + 
Sbjct: 173 PTFAGGSYSLNFTDDSGTVHINSGWSKTKVTSAVHSTDPVAIYEVGKVLLPEAVFGTDIP 352

Query: 188 KPPAPAPAPEKAKASK---KKSADD--TEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAF 242
             PAPAPAPE A A+    +KSAD   +   + D S++  +    +WG L +A   V A 
Sbjct: 353 PTPAPAPAPEIAPAADSPIEKSADSKASSPSSPDGSSSYKILSYGIWGNLVLATFGVLAM 532

Query: 243 SSW 245
             W
Sbjct: 533 L*W 541


>TC9037 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-like
           arabinogalactan protein FLA8 {Arabidopsis thaliana;} ,
           partial (61%)
          Length = 989

 Score = 94.4 bits (233), Expect = 2e-20
 Identities = 58/173 (33%), Positives = 94/173 (53%)
 Frame = +2

Query: 29  APAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSN 88
           AP PSSS  ++  +++KAG  T    +L    + T  +A    ++ GLT FAP+D AF  
Sbjct: 38  APPPSSS-VNLTALIEKAGCKTFASLVLSNGLIKTFQSA----ADKGLTIFAPSDEAFKA 202

Query: 89  LKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNT 148
                L+ L + +   L+Q+H +  ++ + +  T  +P+ T A     +    V+ +G++
Sbjct: 203 RGVPDLSKLTNAEVVSLLQYHAVAKYLPVGSLKTTKDPISTLATNGAGKFEYTVSVAGDS 382

Query: 149 VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKA 201
           V + TG+ +  V  +V     L++Y VD VLLP + F AK P+PAPAPE A A
Sbjct: 383 VTLHTGVDSSRVADTVLDSTPLSIYSVDSVLLPPELF-AKSPSPAPAPEPASA 538


>TC13019 
          Length = 565

 Score = 85.1 bits (209), Expect = 1e-17
 Identities = 50/106 (47%), Positives = 69/106 (64%), Gaps = 4/106 (3%)
 Frame = +1

Query: 140 LNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKA 199
           LNVT+ GN+VN++TG+V+VT+ G VY D  LA+Y+VDKVL+P DF   KP APAPA  KA
Sbjct: 7   LNVTAYGNSVNISTGVVDVTITGIVYFDKTLAIYRVDKVLIPLDFKKPKPIAPAPALAKA 186

Query: 200 -KASKKKSA---DDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAA 241
            KA K+ S+   DD +G    +S+  +     + G   V  +V+AA
Sbjct: 187 PKADKENSSAEDDDDQGQGTKNSSGANRLISSIRGTTLVLSLVLAA 324


>AV771048 
          Length = 430

 Score = 56.6 bits (135), Expect(2) = 2e-17
 Identities = 29/32 (90%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
 Frame = -3

Query: 215 GDDSAAVSVK-QRLVWGPLAVAMVVVAAFSSW 245
           GDDSAAVSVK +RLVWGPL VAMVVVAAFSSW
Sbjct: 359 GDDSAAVSVKHERLVWGPLPVAMVVVAAFSSW 264



 Score = 47.8 bits (112), Expect(2) = 2e-17
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -2

Query: 192 PAPAPEKAKASKKKSADDTEGPA 214
           PAPAPEKAKASKKKSADD EGPA
Sbjct: 429 PAPAPEKAKASKKKSADDPEGPA 361


>TC14342 weakly similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan protein-like,
           partial (27%)
          Length = 724

 Score = 82.4 bits (202), Expect = 6e-17
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +2

Query: 129 TQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVA 187
           TQAG + D    LNVT+SGN V++TTG+V  TV  ++YSD  LAVYQV+KVLLP   F  
Sbjct: 2   TQAGNSGDGEYPLNVTTSGNQVHITTGVVETTVSNTIYSDKTLAVYQVEKVLLPLALF-G 178

Query: 188 KPPAPAPAPEKAKASKKKSADDTEGPAGDDSAA 220
           + P PAPA   A    +K+   ++ P+G  S A
Sbjct: 179 QAPTPAPAEAPAPTQPEKNVRASDSPSGSSSDA 277


>TC12375 weakly similar to GB|AAA59989.1|189479|HUMP53T p53 cellular tumor
           antigen {Homo sapiens;} , partial (6%)
          Length = 468

 Score = 79.0 bits (193), Expect = 7e-16
 Identities = 55/133 (41%), Positives = 68/133 (50%), Gaps = 37/133 (27%)
 Frame = +1

Query: 1   MKHQLFTLPLLALMFFFHSTTTLAAS-------------------SPAPAPS-------- 33
           MK  LF+   LA +F   S TTLA S                   +PAPAPS        
Sbjct: 79  MKQILFSFLFLAPIF---SITTLAQSPAAAPKPPAKPAPTKPSPATPAPAPSKPLVPALP 249

Query: 34  ---------SSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLI-NSNAGLTFFAPND 83
                    S   D+++IL+KA  + TLIRLL+TTQ+  Q+NAQL+   N GLT  AP+D
Sbjct: 250 QSPMVNPDSSGNQDVVKILRKAKSFNTLIRLLKTTQIINQVNAQLVATKNGGLTILAPDD 429

Query: 84  NAFSNLKPGFLNS 96
            AFS LK GF NS
Sbjct: 430 GAFSQLKAGFFNS 468


>TC14428 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan protein
           Pop14A9, partial (15%)
          Length = 573

 Score = 78.6 bits (192), Expect = 9e-16
 Identities = 53/111 (47%), Positives = 70/111 (62%), Gaps = 8/111 (7%)
 Frame = +1

Query: 137 RLALNVTSSGNT-VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFV-AKPPAPAP 194
           RL LNV + GN+ VN++TG+VN ++ G VYSD  LAVY VDKVLLP DFF+ AK PA AP
Sbjct: 1   RLPLNVNALGNSIVNISTGVVNASIIGVVYSDRNLAVYHVDKVLLPLDFFLTAKAPALAP 180

Query: 195 -----APEKAKA-SKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVV 239
                AP+ AK  S  +  D+T     + S AVS+  +  +  L VA+V +
Sbjct: 181 SLSAKAPKAAKENSSAEDEDETNQDQDNKSGAVSL-VKTTFMSLGVALVAI 330


>AV413145 
          Length = 397

 Score = 75.9 bits (185), Expect = 6e-15
 Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 33/127 (25%)
 Frame = +1

Query: 2   KHQLFTLPLLALMFFFHSTTTLAASSPAPAP----------------------------S 33
           K  L +L L  L+   +STTTLA  SPA AP                            S
Sbjct: 16  KQSLLSLSLALLVSLLYSTTTLAQLSPASAPLQPAPPVPTTPASAPKPLVPSLPESPSDS 195

Query: 34  SSP----TDIIRILKKAGGYTTLIRLLQTTQVATQINAQLIN-SNAGLTFFAPNDNAFSN 88
           ++P     DI+ IL+KA  +  LIRL++TTQ+  Q+N+QL+     GLT  AP+D+AFS 
Sbjct: 196 TAPDTAAVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTIKTGGLTILAPDDSAFSE 375

Query: 89  LKPGFLN 95
           LK GFLN
Sbjct: 376 LKAGFLN 396


>AI967375 
          Length = 397

 Score = 75.9 bits (185), Expect = 6e-15
 Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +1

Query: 24  AASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS-NAGLTFFAPN 82
           A+++ +P+  SS  DII+IL+KA  + TLIRLL+TTQ+  Q+ AQL+ + N GLT  AP+
Sbjct: 64  ASATQSPSSDSSGQDIIKILRKAKSFNTLIRLLKTTQIINQVXAQLVTTKNGGLTILAPD 243

Query: 83  DNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRT 129
           D AF + K G   S     K        L     + NFD L++PV T
Sbjct: 244 DGAFHSSKLGTQLSGRSPTKGTDTVPMFLHNMCQVPNFDGLNHPVLT 384


>TC14429 weakly similar to UP|Q8LEJ6 (Q8LEJ6) Arabinogalactan protein-like,
           partial (19%)
          Length = 530

 Score = 65.5 bits (158), Expect = 8e-12
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 149 VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFV-AKPPAPAPAPE--KAKASKKK 205
           VN++TG+VN ++ G VYSD  LAVY VDKVLLP DFF+ AK PA AP+      KA+K+ 
Sbjct: 5   VNISTGVVNASIIGVVYSDRNLAVYHVDKVLLPLDFFLTAKAPALAPSLSA*APKAAKEN 184

Query: 206 SADDTEGPAGDD 217
           S+ + E     D
Sbjct: 185 SSAEDEDETNQD 220


>AV772472 
          Length = 423

 Score = 45.1 bits (105), Expect(2) = 5e-09
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -3

Query: 193 APAPEKAKASKKKSADDTEGPAGDD 217
           APAPEKAKAS+KKS DD EGPAG++
Sbjct: 421 APAPEKAKASEKKSHDDPEGPAGEE 347



 Score = 30.8 bits (68), Expect(2) = 5e-09
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 227 LVWGPLAVAMVVVAA 241
           LVWGPL VAMVVVAA
Sbjct: 317 LVWGPLPVAMVVVAA 273


>TC17034 
          Length = 519

 Score = 55.8 bits (133), Expect = 6e-09
 Identities = 30/62 (48%), Positives = 37/62 (59%)
 Frame = +2

Query: 159 TVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAGDDS 218
           T+ G VYSD  LA+Y VD+VL+P DF   K PAPAP    A  S K ++ D +   GDD 
Sbjct: 5   TLTGIVYSDKTLAIYHVDQVLVPLDFSKPKSPAPAPTLANAPESDKDNSSDED---GDDQ 175

Query: 219 AA 220
            A
Sbjct: 176 GA 181


>AV775636 
          Length = 412

 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 18/21 (85%), Positives = 20/21 (94%)
 Frame = -3

Query: 204 KKSADDTEGPAGDDSAAVSVK 224
           + SADD+EGPAGDDSAAVSVK
Sbjct: 386 RNSADDSEGPAGDDSAAVSVK 324



 Score = 32.7 bits (73), Expect(2) = 4e-08
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 226 RLVWGPLAVAMVVVAA 241
           RLVWGPL VAMVVVAA
Sbjct: 319 RLVWGPLPVAMVVVAA 272


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.316    0.130    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,726,056
Number of Sequences: 28460
Number of extensions: 52347
Number of successful extensions: 874
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of query: 245
length of database: 4,897,600
effective HSP length: 88
effective length of query: 157
effective length of database: 2,393,120
effective search space: 375719840
effective search space used: 375719840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)