BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.7
(734 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 42 3e-04
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 41 8e-04
TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II ... 40 0.001
CB827268 40 0.001
TC8484 similar to UP|Q9XGP1 (Q9XGP1) ESTs AU070372(S13446), part... 39 0.002
TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific... 39 0.003
TC12416 similar to GB|AAH56066.1|33417132|BC056066 sop-prov prot... 39 0.003
AV416351 39 0.004
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ... 39 0.004
TC16697 38 0.005
TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, ... 38 0.005
TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structura... 38 0.005
TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenyla... 37 0.009
BP078507 37 0.011
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 37 0.011
TC15287 similar to UP|Q9FMY5 (Q9FMY5) U2 snRNP auxiliary factor,... 37 0.015
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 36 0.019
BI418387 36 0.019
TC8558 weakly similar to UP|Q9NDI0 (Q9NDI0) 200 kDa antigen p200... 36 0.025
TC17623 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, part... 35 0.033
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 42.4 bits (98), Expect = 3e-04
Identities = 48/195 (24%), Positives = 65/195 (32%), Gaps = 2/195 (1%)
Frame = +1
Query: 333 TPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEP 392
TP P QP P P++ S P +P P +P + S TS+P
Sbjct: 34 TPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQP 213
Query: 393 IILDQPEPEPRPSDHSVPRASERPALPSPRRYP--RPRPERLVDPDHPIQADPLHEADPL 450
+ P P P P P+ PSP P P P + P + P H P
Sbjct: 214 PYIPLPPKTPSPISQP-PHVPTPPSTPSPISQPPYTPTPPKTPSP----TSQPPHTPTP- 375
Query: 451 AQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEPNLGTSEPNVQTFDVGSPQGA 510
P + Q P P P ++P P T++P S PN + P
Sbjct: 376 --PNTPSPISQPPYTPTPP---------KTPSP---TNQPPHIPSPPN-SSSPTSQPPNT 510
Query: 511 SEANSSNHPTSPETN 525
+ PTS N
Sbjct: 511 PSPPKTPSPTSQPPN 555
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 40.8 bits (94), Expect = 8e-04
Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 2/145 (1%)
Frame = +3
Query: 343 QPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEP 402
QP + + S +PSQ + PL P+ S T+P +++ P P P P
Sbjct: 15 QPPATAAATARSTSEPSQSQPPLQPPSSLPQTSSSTTP------PISAPPHPPQNPNPTP 176
Query: 403 RPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQ- 461
P+ + P + P+P P PRP P P + P P QQ QP
Sbjct: 177 IPAPNPNPNPIQIQN-PNPIHNPNPRP--TPTPPQP-RPPPTFNRAPPPQQQQPSHFSHF 344
Query: 462 EPIQPEPETSVSNHSSVRS-PHPQV 485
+ P S S SS S P P +
Sbjct: 345 SSLPPSSAPSPSPASSFNSTPSPSI 419
Score = 34.7 bits (78), Expect = 0.056
Identities = 34/126 (26%), Positives = 49/126 (37%), Gaps = 5/126 (3%)
Frame = +3
Query: 432 LVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPE---PETSVSNHSSVRSP-HPQVET 487
L+DP P A + Q QP P+QP P+TS S + +P HP
Sbjct: 3 LMDPQPPATAAATARSTSEPSQSQP------PLQPPSSLPQTSSSTTPPISAPPHPPQNP 164
Query: 488 SEPNLGTSEPNVQTFDVGSPQGASEANSSNHPTSPETNLSIVPYTYLR-PNSLSECISVF 546
+ + PN + +P N PT P+ P T+ R P + S F
Sbjct: 165 NPTPIPAPNPNPNPIQIQNPNPIHNPNPRPTPTPPQPR---PPPTFNRAPPPQQQQPSHF 335
Query: 547 NHEASL 552
+H +SL
Sbjct: 336 SHFSSL 353
Score = 28.5 bits (62), Expect = 4.0
Identities = 20/78 (25%), Positives = 34/78 (42%)
Frame = +3
Query: 344 PTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPR 403
P PN PR + P + P +N P+ +P+ ++ +S P P P
Sbjct: 228 PIHNPN-PRPTPTPPQPRPPPTFNRAPPPQQQQPS-----HFSHFSSLP-----PSSAPS 374
Query: 404 PSDHSVPRASERPALPSP 421
PS S ++ P++P+P
Sbjct: 375 PSPASSFNSTPSPSIPAP 428
>TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II , partial
(6%)
Length = 583
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/104 (28%), Positives = 37/104 (34%)
Frame = -1
Query: 340 PAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPE 399
P P+SPP SP + P TP P SP T +S + P P
Sbjct: 352 PPPPPSSPPMSPSPTATSPPTSSPNTHPPTPTPNP*SSPSPSTTTASS--ASPSTKTLPS 179
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADP 443
PRP+ S S P+ P P P R+ P P P
Sbjct: 178 TRPRPASES--PTSSSPSSPPPSSGSSVSPPRISPPPPPPSNSP 53
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Frame = -2
Query: 388 LTSEPIILDQPEPEP---RPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPL 444
L S+PI+ P P P RP H P + R RP R P P
Sbjct: 396 LRSDPILQASPIPHPLLLRPHRH-------------PCHHLRRRPHRQPPPQTP------ 274
Query: 445 HEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHP 483
+ +P + P++P+P +H R P P
Sbjct: 273 ------TLRHRPQTLDPHPLRPQPRHPPPHHRRRRFPQP 175
Score = 29.6 bits (65), Expect = 1.8
Identities = 27/114 (23%), Positives = 43/114 (37%)
Frame = -2
Query: 334 PILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPI 393
PIL+ P P +P + P ++ + P P T+++ T +P
Sbjct: 384 PILQASPIPHPL---------LLRPHRH--PCHHLRRRPHRQPPPQTPTLRHRPQTLDPH 238
Query: 394 ILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEA 447
L +P+P P H RR+P+P + L P PLH+A
Sbjct: 237 PL-RPQPRHPPPHHR------------RRRFPQPAQDPLPSPRRRRPRVPLHQA 115
>CB827268
Length = 533
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +2
Query: 370 QTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSV--PRASERPALPSPRRYPR- 426
QTP P++PT+ +LT P P P+PRP++HS PR P P P+R P+
Sbjct: 71 QTPNPTKPTT-------NLTP*P-----PPPQPRPANHSPLEPRTHAHPTSPHPQRNPQC 214
Query: 427 ---PRPERLVDP 435
P P+ +P
Sbjct: 215 KSTPTPDLKPNP 250
Score = 30.4 bits (67), Expect = 1.1
Identities = 20/80 (25%), Positives = 29/80 (36%)
Frame = +1
Query: 351 PRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVP 410
P + QP P P+P+ +P T ++P + P P
Sbjct: 82 PHQTHNQPHPITTPTATQTSKPQPTRTQNPRTPNLTPSPTQPTVQIDPH----------P 231
Query: 411 RASERPALPSPRRYPRPRPE 430
R +PA RR+P PR E
Sbjct: 232 RFETQPAALLRRRHPTPRSE 291
>TC8484 similar to UP|Q9XGP1 (Q9XGP1) ESTs AU070372(S13446), partial (76%)
Length = 1121
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/95 (36%), Positives = 42/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 333 TPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSE- 391
+P L P P+SPPNSP S S P + P PS P SP NSL
Sbjct: 139 SPPLSSHP--NPSSPPNSPPSP--SSSTVATPNPSDSHPPPPSPPPSPSAT--NSLNPPY 300
Query: 392 PIILDQPEPEPRPSDHSVPRASERPALPSPRRYPR 426
P +P PS +S PR + + PSP R PR
Sbjct: 301 PTSTTPARSKPSPSLNS-PRGRRQSSSPSPARSPR 402
Score = 28.9 bits (63), Expect = 3.1
Identities = 28/115 (24%), Positives = 46/115 (39%), Gaps = 1/115 (0%)
Frame = +1
Query: 425 PRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQ 484
P P +P P + P + +A P+ P P P S S +S+ P+P
Sbjct: 136 PSPPLSSHPNPSSPPNSPPSPSSSTVAT---PNPSDSHPPPPSPPPSPSATNSLNPPYPT 306
Query: 485 VETSEPNLGTSEPNVQTFDVGSPQGASEANSSNHPTSPE-TNLSIVPYTYLRPNS 538
T S+P+ + SP+G +++S + SP S P ++ P S
Sbjct: 307 STTP----ARSKPSP---SLNSPRGRRQSSSPSPARSPRLARRSTSPGSWRNPPS 450
>TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific
extensin-like protein precursor (PELP), partial (11%)
Length = 630
Score = 38.9 bits (89), Expect = 0.003
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 5/186 (2%)
Frame = +2
Query: 372 PRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPER 431
P P +P +P T T P ++ P P P+P +A P + SP +P P
Sbjct: 149 PSPVKPPTPSTPAVTVPT--PPLVKAPTPPPQPP----VKAPSPPIVKSPPYFPPP---- 298
Query: 432 LVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEPN 491
+ P PI P +A P V+ P P P V++P P + S P
Sbjct: 299 VKAPSPPIVKSPPVKAP------TPPIVKSPPSYPPP---------VKAPSPPIVKSPPV 433
Query: 492 LGTSEPNVQT-----FDVGSPQGASEANSSNHPTSPETNLSIVPYTYLRPNSLSECISVF 546
+ P V++ V +P HP + ++ +P T + S+ +CI +
Sbjct: 434 KAPTPPIVKSPPYYPPPVKAPTPPQVKTPPPHPPVVKPPVAPIPSTPI-VKSMKDCIPLC 610
Query: 547 NHEASL 552
N+ L
Sbjct: 611 NYRCQL 628
Score = 34.3 bits (77), Expect = 0.073
Identities = 23/86 (26%), Positives = 34/86 (38%)
Frame = +2
Query: 416 PALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNH 475
PA PSP + P P + P P+ P P + P V+ P P P
Sbjct: 140 PAPPSPVKPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYFPPP------- 298
Query: 476 SSVRSPHPQVETSEPNLGTSEPNVQT 501
V++P P + S P + P V++
Sbjct: 299 --VKAPSPPIVKSPPVKAPTPPIVKS 370
>TC12416 similar to GB|AAH56066.1|33417132|BC056066 sop-prov protein
{Xenopus laevis;} , partial (32%)
Length = 416
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/73 (36%), Positives = 33/73 (44%), Gaps = 1/73 (1%)
Frame = -2
Query: 367 NMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPA-LPSPRRYP 425
N L P + S +T ++ L+ P +P P PRP PR S RP P PR P
Sbjct: 301 NDLIIPAFTRRPSLVTGTHSFLSPSPRRPRRPRPRPRPR----PRPSPRPRPSPRPRPNP 134
Query: 426 RPRPERLVDPDHP 438
P P L PD P
Sbjct: 133 SPNPSALGSPDAP 95
Score = 30.8 bits (68), Expect = 0.81
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -2
Query: 371 TPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPE 430
+P P P P P +P P PRPS P S P+ PRP P+
Sbjct: 235 SPSPRRPRRP--------RPRPRPRPRPSPRPRPSPRPRPNPSPNPSALGSPDAPRPSPD 80
>AV416351
Length = 428
Score = 38.5 bits (88), Expect = 0.004
Identities = 30/109 (27%), Positives = 48/109 (43%)
Frame = +3
Query: 334 PILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPI 393
P P P PP P SS P ++ +P+ ++L +P P + SP TI+ + L+
Sbjct: 66 PFSSSSPPRNPRPPPPPPPSSSSSPEKKNSPINHVLPSPTPHQ--SPKTIRQSDLS---- 227
Query: 394 ILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQAD 442
P + + S RP PSP P P + +P+ P +A+
Sbjct: 228 ----------PMNSPKSKLSARP--PSPLTLP-PSQLKTEEPNVPDEAE 335
Score = 35.8 bits (81), Expect = 0.025
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Frame = +3
Query: 375 SEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERP---ALPSPRRYPRPRPER 431
S P+SP+ +S P +P P P PS S P P LPSP + P+ R
Sbjct: 33 SLPSSPLPKAPPFSSSSPPRNPRPPPPPPPSSSSSPEKKNSPINHVLPSPTPHQSPKTIR 212
Query: 432 LVD------PDHPIQADPLHEADPLAQQVQPDQVQQEPIQPE-PETSVSNHSSVRSPHPQ 484
D P + A P P + P Q++ E +P P+ + S V+ +
Sbjct: 213 QSDLSPMNSPKSKLSARP-----PSPLTLPPSQLKTE--EPNVPDEAESKAVLVQKTIDK 371
Query: 485 VETSEPNLGTSEPNVQT 501
+ N G+ EP+ +T
Sbjct: 372 PKAWHHNNGSGEPHRET 422
>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
Length = 841
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +1
Query: 399 EPEP---RPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQ 455
EP+P +P H + P + +P+P+ + P H Q+ P Q Q
Sbjct: 22 EPQPLQYQPQPHLQHQPQHHPHF---QPHPQPQLQSQPQPQHIQQSQP-------QPQSQ 171
Query: 456 PDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEPNL-GTSEPNVQTFDVGSPQGASEAN 514
P +QQ QP+P+ H P PQ + GT P G P + +
Sbjct: 172 PQHIQQP--QPQPQL---QHIQQSQPQPQFQNQHFQYPGTYPPPPWAATPGYPNYQNHLS 336
Query: 515 SSNHPTSPETNLSIVPYT 532
S+N ++P+ N PYT
Sbjct: 337 STNALSTPQAN---TPYT 381
>TC16697
Length = 635
Score = 38.1 bits (87), Expect = 0.005
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = -1
Query: 344 PTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPS----EPTSPITIQYNSLTSEPIILDQPE 399
P S P+ P S +P+ AP N Q+P P+ +PTSP + S S Q
Sbjct: 554 PPSSPSPPAPSQRKPAPATAPPSNSSQSPPPNPSSTDPTSPAPQPHPSHLSPASSSSQGS 375
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPR 426
P P PS + P + R PR
Sbjct: 374 PVPSPSPSPPITSPSSPPIGDSSRQPR 294
>TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, partial
(24%)
Length = 702
Score = 38.1 bits (87), Expect = 0.005
Identities = 43/162 (26%), Positives = 65/162 (39%), Gaps = 12/162 (7%)
Frame = +1
Query: 341 AEQPTSPPNSPRSSFFQPSQQ-------EAPLWNMLQ--TPRPSEPTSPITIQYNSLTSE 391
+ QP PP + S F+ QQ PL + P+P P P + L
Sbjct: 193 SHQPRFPPTNLLQSHFRHLQQTHHMELHHPPLHLARRHLPPKPRLPPRPRKSRPPRLPP- 369
Query: 392 PIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVD--PDHPIQADPLHEADP 449
P+ L P P+P +PR +P P P P P++L+ P H P P
Sbjct: 370 PLNLPHSAPCPQPQKQPLPRPHTKPLQPHRHETPLPLPQQLLR*LPRHAHLPHPPLPP*P 549
Query: 450 LAQQ-VQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEP 490
L QQ ++ D +++ + P T + R PH + E +P
Sbjct: 550 LPQQPLRRDSGRRKQLHAAPHTPP*W*PTPR-PHSEHELPQP 672
>TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structural protein
pp78/81, partial (5%)
Length = 710
Score = 38.1 bits (87), Expect = 0.005
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Frame = +3
Query: 378 TSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDH 437
TS T S P+ Q P P S+P +P P P+ P++ + P
Sbjct: 12 TSAGTDPVQQAASAPLQSQQQFPSPVNLPQSIP------VVPPPNAPPQLPPQQGLPPSF 173
Query: 438 PI-------------QADPLHEADPLAQQVQPDQVQQEPI--QPEPETSVSNHSSV-RSP 481
P Q DP + P+ Q P+Q Q+P+ QP P+ H ++P
Sbjct: 174 PPPNQFSQTQIPAVPQRDP-YFPPPVQSQETPNQQYQQPLAPQPHPQPGAPPHQQYQQTP 350
Query: 482 HPQVETSEP 490
HPQ P
Sbjct: 351 HPQYSQPAP 377
>TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenylated Rab
receptor 2 {Arabidopsis thaliana;}, partial (78%)
Length = 1012
Score = 37.4 bits (85), Expect = 0.009
Identities = 39/143 (27%), Positives = 48/143 (33%), Gaps = 4/143 (2%)
Frame = +1
Query: 342 EQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPE 401
+QP PP P S P + P + L P P P P S P P P
Sbjct: 46 KQPCPPPRHPSSPSPTPLRHPPP--SHLPDPTPLPPPPP---------SAPSSTTSPNPS 192
Query: 402 PRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQ 461
S +VP S A SP R P P P P + P + +
Sbjct: 193 ATASLSAVPGRSLPIAPHSPNRNPSPMP-----PSASARISPTSASTTTPSFRSSSPCRS 357
Query: 462 EPIQ----PEPETSVSNHSSVRS 480
PI+ P P S+ HSS S
Sbjct: 358 SPIRSRSSP*PAFSLPGHSSTSS 426
>BP078507
Length = 414
Score = 37.0 bits (84), Expect = 0.011
Identities = 33/121 (27%), Positives = 43/121 (35%)
Frame = -1
Query: 340 PAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPE 399
P+ S P +SS P PL + P P+ PTSP + L P QP
Sbjct: 345 PSSHT*SSPTDKQSS---PESYPTPLHS--PQPSPNAPTSPYPAPSSQLRPPPSTSHQPP 181
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQV 459
P P P+ P P P P +P HP + P + P + Q Q
Sbjct: 180 PTLLQPTSDTPS----PSPPPPSSPNPPPPHHSPNPPHPPSSSP---SPPQSSQGQRSTA 22
Query: 460 Q 460
Q
Sbjct: 21 Q 19
Score = 36.2 bits (82), Expect = 0.019
Identities = 28/94 (29%), Positives = 33/94 (34%)
Frame = -1
Query: 328 TATQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNS 387
T Q +P P P PN+P S + PS Q P P S P +Q S
Sbjct: 318 TDKQSSPESYPTPLHSPQPSPNAPTSPYPAPSSQLRP------PPSTSHQPPPTLLQPTS 157
Query: 388 LTSEPIILDQPEPEPRPSDHSVPRASERPALPSP 421
T P P P P HS + PSP
Sbjct: 156 DTPSPSPPPPSSPNPPPPHHSPNPPHPPSSSPSP 55
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/97 (23%), Positives = 33/97 (33%), Gaps = 10/97 (10%)
Frame = -1
Query: 404 PSDHS----VPRASERPALPSPRRYPRPRPERLVDP----DHPIQADPLHEADPLAQQVQ 455
PS H+ + S + P+P P+P P P ++ P P +Q
Sbjct: 345 PSSHT*SSPTDKQSSPESYPTPLHSPQPSPNAPTSPYPAPSSQLRPPPSTSHQPPPTLLQ 166
Query: 456 PDQVQQEPIQPEPET--SVSNHSSVRSPHPQVETSEP 490
P P P P + H S PHP + P
Sbjct: 165 PTSDTPSPSPPPPSSPNPPPPHHSPNPPHPPSSSPSP 55
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 37.0 bits (84), Expect = 0.011
Identities = 26/97 (26%), Positives = 40/97 (40%), Gaps = 11/97 (11%)
Frame = +2
Query: 340 PAEQPTSPPNSPRSSF-----FQPSQQEAPLWNMLQTPRPSEP-TSPITIQYNSLTSEPI 393
P P+ P SP+++ +PS +P W+ P P P +SP + ++ + P
Sbjct: 365 PLPNPSVPSPSPKTTSRDSPPTRPSTTSSPAWSSASAPAPPPPSSSPSSASFSPPANSPT 544
Query: 394 ILDQPEPEPR-----PSDHSVPRASERPALPSPRRYP 425
P P R PS P ++ PA SP P
Sbjct: 545 SSASPPPSARRSRRDPSASRSPSSTTIPASISPSTAP 655
>TC15287 similar to UP|Q9FMY5 (Q9FMY5) U2 snRNP auxiliary factor, small
subunit, partial (81%)
Length = 1263
Score = 36.6 bits (83), Expect = 0.015
Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = -3
Query: 347 PPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEP---IILDQPEPEPR 403
P P S FF P + P T P PT PIT + +T+ P II+ P
Sbjct: 877 PLLDPGSPFFAPFPRRTP------TMPPPSPTIPITA--SPITAPPPSRIIIPVPMT--- 731
Query: 404 PSDHSVPRASERPALPSP-RRYPRPRPERL----VDPDHPIQADPLHE 446
P P AS R P+P R P P PER+ + P P +HE
Sbjct: 730 PLAIHTPSASGRTPAPAPTNRTPAPNPERVR*KKLPPQVPTYQLNMHE 587
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 36.2 bits (82), Expect = 0.019
Identities = 40/166 (24%), Positives = 59/166 (35%), Gaps = 14/166 (8%)
Frame = +3
Query: 385 YNSLT-SEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADP 443
Y SL+ S+P +L PS S P P P+ P P + P P P
Sbjct: 42 YISLSDSDPWLLSSAASRSPPSSSSSPSPPPPPHAPAAASSSPPTPSATLPPT-PSPPSP 218
Query: 444 LHEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEPNLGTSEPNVQTFD 503
+ PL+ + P+ T+ SN ++ R H S P L T+ P T
Sbjct: 219 RSDPSPLSTST-TNPTTSSSTTPKTTTNKSNPNTARLSHAAP*GSPPLLTTTSPPSVTAP 395
Query: 504 VGSPQGASEANS-------------SNHPTSPETNLSIVPYTYLRP 536
S ++S S+ P+SP + P T + P
Sbjct: 396 RTSSASRLPSSSALDAALSPPLPCTSSGPSSPPVTTTAPPCTAISP 533
Score = 30.0 bits (66), Expect = 1.4
Identities = 26/106 (24%), Positives = 40/106 (37%)
Frame = +3
Query: 324 LLNRTATQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITI 383
LL+ A++ P P+ P PP++P ++ P A L P PS P
Sbjct: 72 LLSSAASRSPPSSSSSPSPPP--PPHAPAAASSSPPTPSATL-----PPTPSPP------ 212
Query: 384 QYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRP 429
S S+P L P S + P+ + + P+ R P
Sbjct: 213 ---SPRSDPSPLSTSTTNPTTSSSTTPKTTTNKSNPNTARLSHAAP 341
>BI418387
Length = 479
Score = 36.2 bits (82), Expect = 0.019
Identities = 36/131 (27%), Positives = 49/131 (36%), Gaps = 5/131 (3%)
Frame = +2
Query: 302 SKCVVTESNDDLNSLDALPISTLLNRTATQLT--PILEFQPAEQPTS---PPNSPRSSFF 356
SK T +N + P +T+++ + T P L F+ PTS PPN+ SS
Sbjct: 146 SKIGSTSTNSSESHYSTKPCNTIISTETSPSTCIPSLPFRTLISPTSSLAPPNTTSSS-- 319
Query: 357 QPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERP 416
PS PT P T + +SEP P+P S P +E
Sbjct: 320 -----------------PSAPTKPST----TTSSEPPFPGPTSPQPSSSRSENPTGAESS 436
Query: 417 ALPSPRRYPRP 427
A S P P
Sbjct: 437 APTSTTSAPSP 469
>TC8558 weakly similar to UP|Q9NDI0 (Q9NDI0) 200 kDa antigen p200
(Fragment), partial (4%)
Length = 585
Score = 35.8 bits (81), Expect = 0.025
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +1
Query: 599 RIEAARQRFNRRVAMHEQQQRTKLLEAVEEARRKKEQAEEAARQEAAQAENARLEAERL- 657
R++A +R N R+ + LEA + R++ + +E +EAA+AE R E E
Sbjct: 31 RLDAEERRNNIRLREEQDAAYRAALEADQARERQRREEQERLAREAAEAERKRKEEEEAR 210
Query: 658 EVEA-EALRGQALAPVVFTPVTSDSTQAPHSAQNVPSTSSQ-PSSSRLDIMEQRLNSHET 715
E EA EA QA + + P NV + P+ R E+R N+ T
Sbjct: 211 EREAREAAEKQAALAKIRQQKAESLGEEPAKGPNVTQVLVRFPTGER---KERRFNNTVT 381
Query: 716 L 716
+
Sbjct: 382 I 384
>TC17623 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, partial (19%)
Length = 624
Score = 35.4 bits (80), Expect = 0.033
Identities = 26/94 (27%), Positives = 34/94 (35%)
Frame = +1
Query: 417 ALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNHS 476
A PSP PR RP ++ P H Q L Q+QP Q+ +QPE +
Sbjct: 397 AAPSPASRPRGRPRKVQPPQHLPQTLTL-----AGVQLQPQLPPQQQVQPEAQ------- 540
Query: 477 SVRSPHPQVETSEPNLGTSEPNVQTFDVGSPQGA 510
PQ + P + N P GA
Sbjct: 541 ------PQTQNLPPQFNNVQQNAAPAQNAEPVGA 624
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,092,399
Number of Sequences: 28460
Number of extensions: 192398
Number of successful extensions: 2031
Number of sequences better than 10.0: 255
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of query: 734
length of database: 4,897,600
effective HSP length: 97
effective length of query: 637
effective length of database: 2,136,980
effective search space: 1361256260
effective search space used: 1361256260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0134.7