BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.21
(515 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16363 UP|Q84RQ3 (Q84RQ3) Sucrose transporter 4 protein, complete 501 e-142
TC16087 similar to UP|Q40583 (Q40583) Sucrose transporter, parti... 279 9e-76
AV412579 250 3e-67
TC16410 similar to UP|Q9XHL6 (Q9XHL6) Sucrose transport protein ... 223 6e-59
TC13714 homologue to UP|Q7XA53 (Q7XA53) Sucrose transporter, par... 213 8e-56
TC17883 similar to UP|Q41152 (Q41152) Sucrose carrier, partial (... 179 1e-45
TC16079 similar to UP|O04077 (O04077) Sucrose transport protein,... 160 6e-40
AV429193 154 3e-38
TC18374 similar to UP|Q9FIX9 (Q9FIX9) Sucrose transporter protei... 139 1e-33
AU089646 122 2e-28
AU240127 116 1e-26
AV428784 113 7e-26
TC13379 similar to UP|O65803 (O65803) Sucrose/H+ symporter, part... 59 1e-24
TC17707 similar to UP|Q7XA53 (Q7XA53) Sucrose transporter, parti... 78 3e-15
BP029340 60 9e-10
AV420224 52 2e-07
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 35 0.038
AV418706 33 0.086
AV406645 33 0.086
TC12360 similar to UP|O22196 (O22196) At2g40820 protein, partial... 33 0.086
>TC16363 UP|Q84RQ3 (Q84RQ3) Sucrose transporter 4 protein, complete
Length = 2164
Score = 501 bits (1290), Expect = e-142
Identities = 253/494 (51%), Positives = 335/494 (67%), Gaps = 9/494 (1%)
Frame = +3
Query: 13 QNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQLLGVPH 72
++ N + SS + P++ PL +++ VAS+A+G+QFGWALQLSLLTPYVQ LG+PH
Sbjct: 192 RSKNRPSTSSARPPPSRPPPARVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPH 371
Query: 73 KWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAIAVFLIGFAADIG 132
+W+S IWLCGP+SGL VQP+VG+ SD+CTSRFGRRRPFI AGA ++ +AV +IG+AADIG
Sbjct: 372 QWASIIWLCGPVSGLFVQPLVGHLSDKCTSRFGRRRPFILAGAASIVVAVLIIGYAADIG 551
Query: 133 YSMGDDLSKKTRPRAVAFFVIGFWILDVANNMLQGPCRAFLGDLSTGHHSRIRTANTIFS 192
+ +GD ++ RP A+ FVIGFWILDVANN+ QGPCRA L DL++ + R R AN FS
Sbjct: 552 WMLGD--TESFRPAAITVFVIGFWILDVANNVTQGPCRALLADLTSKDNRRTRVANAYFS 725
Query: 193 FFMGVGNVLGYLAGSYGGLHKIFPFTETKACDVFCANLKSCFFFSITLLLVLSGFALFYV 252
FM +GN+LGY G+Y G ++IF FT + AC + CANLKS FF + + V + ++
Sbjct: 726 LFMAIGNILGYATGAYSGWYRIFTFTLSPACTISCANLKSAFFLDVAFIAVTTYVSITAA 905
Query: 253 HDPPI--------GSRREEDDKAPKNVFVELFGAFKELKKPMLMLMLVTSLNWIAWFPYV 304
H+ P+ G E + ELFG FK + +++ VT+LNW WFP++
Sbjct: 906 HEVPLNSSGAAHAGEGAGESGSTEEAFMWELFGTFKYFSSTVWIILSVTALNWTGWFPFI 1085
Query: 305 LYDTDWMGLEVYGG-KLGSKAYDAGVRAGALGLVLNSVVLGLMSLAVEPLGRYLGGVKRL 363
L+DTDWMG E+YG G YDAGVR GALGL+LNSVVLG+ SL +E L R G +
Sbjct: 1086LFDTDWMGREIYGADPNGGPNYDAGVRMGALGLMLNSVVLGVTSLLMEKLCR-KRGAGFV 1262
Query: 364 WAIVNIILAVCMAMTMLITKVAEHDRRVSGGATIGRPTPGVKAGALMFFAVLGIPLAITY 423
W I NI++AVC +++T VA G P G+ AL+ F +LG PLAITY
Sbjct: 1263WGISNILMAVCFLAMLVVTYVA----NTIGYVGKDLPPTGIVIAALIIFTILGFPLAITY 1430
Query: 424 SVPFALASIYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGGNLPAFMVGAV 483
SVP+AL S ++ G GQGLS+GVLN+AIVIPQ++VS +GPWD LFGGGN AF VGAV
Sbjct: 1431SVPYALISKHTEPLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNSAAFAVGAV 1610
Query: 484 MAAVSAVLAMVLLP 497
A +S +LA++ +P
Sbjct: 1611AAIMSGLLAVLAIP 1652
>TC16087 similar to UP|Q40583 (Q40583) Sucrose transporter, partial (23%)
Length = 623
Score = 279 bits (713), Expect = 9e-76
Identities = 144/144 (100%), Positives = 144/144 (100%)
Frame = +2
Query: 372 AVCMAMTMLITKVAEHDRRVSGGATIGRPTPGVKAGALMFFAVLGIPLAITYSVPFALAS 431
AVCMAMTMLITKVAEHDRRVSGGATIGRPTPGVKAGALMFFAVLGIPLAITYSVPFALAS
Sbjct: 2 AVCMAMTMLITKVAEHDRRVSGGATIGRPTPGVKAGALMFFAVLGIPLAITYSVPFALAS 181
Query: 432 IYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVL 491
IYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVL
Sbjct: 182 IYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVL 361
Query: 492 AMVLLPSPKPEEMAKASISASGFH 515
AMVLLPSPKPEEMAKASISASGFH
Sbjct: 362 AMVLLPSPKPEEMAKASISASGFH 433
>AV412579
Length = 394
Score = 250 bits (639), Expect = 3e-67
Identities = 122/122 (100%), Positives = 122/122 (100%)
Frame = +3
Query: 1 MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSL 60
MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSL
Sbjct: 27 MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSL 206
Query: 61 LTPYVQLLGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAI 120
LTPYVQLLGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAI
Sbjct: 207 LTPYVQLLGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAI 386
Query: 121 AV 122
AV
Sbjct: 387 AV 392
>TC16410 similar to UP|Q9XHL6 (Q9XHL6) Sucrose transport protein SUT1,
partial (27%)
Length = 502
Score = 223 bits (568), Expect = 6e-59
Identities = 107/145 (73%), Positives = 125/145 (85%)
Frame = +2
Query: 15 NNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQLLGVPHKW 74
+N++ PSS VE A SPL K+I VASIAAGVQFGWALQLSLLTPYVQLLG+PHKW
Sbjct: 74 HNNLKPSSLHVEAPPPEA--SPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKW 247
Query: 75 SSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAIAVFLIGFAADIGYS 134
+++IWLCGPISG++VQPIVGY SDRCTSRFGRRRPFI AGA+AVAIAVFLIG+AAD G++
Sbjct: 248 AAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADFGHA 427
Query: 135 MGDDLSKKTRPRAVAFFVIGFWILD 159
+GD L KK R RA+A F++GFWILD
Sbjct: 428 LGDRLDKKIRTRAIAIFIVGFWILD 502
>TC13714 homologue to UP|Q7XA53 (Q7XA53) Sucrose transporter, partial (32%)
Length = 512
Score = 213 bits (541), Expect = 8e-56
Identities = 104/170 (61%), Positives = 127/170 (74%), Gaps = 3/170 (1%)
Frame = +2
Query: 194 FMGVGNVLGYLAGSYGGLHKIFPFTETKACDVFCANLKSCFFFSITLLLVLSGFALFYVH 253
FM VGNVLGY AG+Y L+ +FPFT+T ACDV+CANLKSCFF SI LL L+ AL YV
Sbjct: 2 FMAVGNVLGYAAGAYSKLYHVFPFTKTTACDVYCANLKSCFFLSIALLTTLATAALVYVK 181
Query: 254 DPPIGSRR---EEDDKAPKNVFVELFGAFKELKKPMLMLMLVTSLNWIAWFPYVLYDTDW 310
+ P+ + + DD F +L GAF+ELK+PM +L+LVT LNWIAWFP++L+DTDW
Sbjct: 182 EVPLSPEKAVIDSDDNGGMPCFGQLSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDW 361
Query: 311 MGLEVYGGKLGSKAYDAGVRAGALGLVLNSVVLGLMSLAVEPLGRYLGGV 360
MG EVYGG++G AYD GV AGALGL+LNSVVLG SL +E L R +GGV
Sbjct: 362 MGKEVYGGEVGDHAYDQGVHAGALGLMLNSVVLGATSLGLEYLARGVGGV 511
>TC17883 similar to UP|Q41152 (Q41152) Sucrose carrier, partial (19%)
Length = 428
Score = 179 bits (454), Expect = 1e-45
Identities = 91/123 (73%), Positives = 101/123 (81%)
Frame = +3
Query: 11 TTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQLLGV 70
T N+ SS Q+E A SPL KMIAVASIAAG+QFGWALQLSLLTPYVQ LGV
Sbjct: 63 TKSNHLDTKGSSLQIE-AHIPQQSSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQTLGV 239
Query: 71 PHKWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAIAVFLIGFAAD 130
PH W+SFIWLCGP+SGL+VQPIVGY SDR T RFGRRRPFI AGA+AVAI+VFLIG+AAD
Sbjct: 240 PHIWASFIWLCGPVSGLLVQPIVGYYSDRTTCRFGRRRPFILAGAVAVAISVFLIGYAAD 419
Query: 131 IGY 133
IG+
Sbjct: 420 IGH 428
>TC16079 similar to UP|O04077 (O04077) Sucrose transport protein, partial
(18%)
Length = 573
Score = 160 bits (404), Expect = 6e-40
Identities = 79/104 (75%), Positives = 94/104 (89%), Gaps = 2/104 (1%)
Frame = +2
Query: 414 VLGIPLAITYSVPFALASIYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGG 473
V+GIPLAI +SVPFALASIYSS+ GAGQGLSLGVLN+AIV+PQM+VS L+GPWD+LFGGG
Sbjct: 5 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 184
Query: 474 NLPAFMVGAVMAAVSAVLAMVLLPSPKPEEMAKASI--SASGFH 515
NLPAF+VGAVMAAVSA++A+VLLP+PKP ++AKAS GFH
Sbjct: 185 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPPGGGFH 316
>AV429193
Length = 295
Score = 154 bits (390), Expect = 3e-38
Identities = 71/97 (73%), Positives = 83/97 (85%)
Frame = +1
Query: 278 AFKELKKPMLMLMLVTSLNWIAWFPYVLYDTDWMGLEVYGGKLGSKAYDAGVRAGALGLV 337
AFKELKKPM +LMLVT++NW+AWFP+ L+DTDWMG EVYGG +G KAYD GVRAG+LGL+
Sbjct: 4 AFKELKKPMWILMLVTAVNWVAWFPFFLFDTDWMGREVYGGVVGEKAYDDGVRAGSLGLM 183
Query: 338 LNSVVLGLMSLAVEPLGRYLGGVKRLWAIVNIILAVC 374
+N+VVL MSLA EPL R LGGVK LW IVN ILA+C
Sbjct: 184 INAVVLAFMSLAAEPLWRILGGVKNLWRIVNFILAIC 294
>TC18374 similar to UP|Q9FIX9 (Q9FIX9) Sucrose transporter protein, partial
(17%)
Length = 330
Score = 139 bits (349), Expect = 1e-33
Identities = 69/109 (63%), Positives = 78/109 (71%)
Frame = +3
Query: 172 FLGDLSTGHHSRIRTANTIFSFFMGVGNVLGYLAGSYGGLHKIFPFTETKACDVFCANLK 231
FLGDL+ G + RTA FSFFM VGNVLGY AG+Y GLHKIFPFT T AC FCANLK
Sbjct: 3 FLGDLAAGDQKKTRTAMGFFSFFMAVGNVLGYAAGAYSGLHKIFPFTVTDACPSFCANLK 182
Query: 232 SCFFFSITLLLVLSGFALFYVHDPPIGSRREEDDKAPKNVFVELFGAFK 280
SCFFFSI LLL+LS AL YV D P+ + D +P + F +LFGAFK
Sbjct: 183 SCFFFSILLLLILSIAALIYVEDTPLTKKPAADVDSPVSCFGDLFGAFK 329
>AU089646
Length = 411
Score = 122 bits (305), Expect = 2e-28
Identities = 60/136 (44%), Positives = 82/136 (60%), Gaps = 9/136 (6%)
Frame = +2
Query: 210 GLHKIFPFTETKACDVFCANLKSCFFFSITLLLVLSGFALFYVHDPPIGSRRE------- 262
G +K+FPFT T AC+V CANLKS FF I +++ + + H+ P+ S
Sbjct: 2 GWYKVFPFTLTPACNVSCANLKSAFFLDIIFIVITTYISTVSAHEVPLNSSGAHPVEEGA 181
Query: 263 -EDDKAPKNVFVELFGAFKELKKPMLMLMLVTSLNWIAWFPYVLYDTDWMGLEVYGGKLG 321
E A + E+FG FK KP+ +++ VT+L WI WFP++L+DTDWMG E+YGG+
Sbjct: 182 GESXSAEEAFLWEMFGTFKYFSKPIWIILSVTALTWIGWFPFLLFDTDWMGREIYGGEPN 361
Query: 322 -SKAYDAGVRAGALGL 336
YD GVR GALGL
Sbjct: 362 EGPNYDIGVRMGALGL 409
>AU240127
Length = 300
Score = 116 bits (290), Expect = 1e-26
Identities = 53/96 (55%), Positives = 67/96 (69%)
Frame = +3
Query: 7 PPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQ 66
PP +TT ++P PL +++ VAS+A G+QFGWALQLSLLTPYVQ
Sbjct: 21 PPTTTTTTTQP------PLQPRPKPRARVPLTQLLKVASVAGGIQFGWALQLSLLTPYVQ 182
Query: 67 LLGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCTS 102
LG+PH W+S IWLCGP+SGL VQP+VG+ SDRCT+
Sbjct: 183 QLGIPHAWASIIWLCGPLSGLFVQPLVGHMSDRCTN 290
>AV428784
Length = 334
Score = 113 bits (283), Expect = 7e-26
Identities = 61/94 (64%), Positives = 69/94 (72%)
Frame = +2
Query: 8 PNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQL 67
PNSTTQNNNS+ P F+ +PAQ A GP+ AK++ ASIA VQFGWALQ SLLTP VQL
Sbjct: 53 PNSTTQNNNSMVP**FKEKPAQIAQGPTQFAKIMVGASIAPEVQFGWALQFSLLTPNVQL 232
Query: 68 LGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCT 101
LGVP+K S I GPI GLVVQP+ YS DR T
Sbjct: 233 LGVPNKGPSLIGFWGPIFGLVVQPMGAYSRDR*T 334
>TC13379 similar to UP|O65803 (O65803) Sucrose/H+ symporter, partial (12%)
Length = 534
Score = 58.9 bits (141), Expect(3) = 1e-24
Identities = 27/37 (72%), Positives = 33/37 (88%)
Frame = +2
Query: 400 PTPGVKAGALMFFAVLGIPLAITYSVPFALASIYSSS 436
P+ GVKA A++ F+VLGIPLAITYS+PFAL SIYS+S
Sbjct: 2 PSTGVKASAMILFSVLGIPLAITYSIPFALGSIYSTS 112
Score = 50.1 bits (118), Expect(3) = 1e-24
Identities = 22/28 (78%), Positives = 27/28 (95%)
Frame = +1
Query: 467 DSLFGGGNLPAFMVGAVMAAVSAVLAMV 494
D+LFGGGNLPAF+VGA+MA VSA+LA+V
Sbjct: 205 DALFGGGNLPAFLVGAIMAVVSAILAIV 288
Score = 40.8 bits (94), Expect(3) = 1e-24
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 437 TGAGQGLSLGVLNVAIVIPQMIVSALNGP 465
TG GQGL GV N+A+VIPQ+I+ L+GP
Sbjct: 114 TGGGQGLYFGVHNIAMVIPQIIIWGLSGP 200
>TC17707 similar to UP|Q7XA53 (Q7XA53) Sucrose transporter, partial (11%)
Length = 554
Score = 78.2 bits (191), Expect = 3e-15
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = +2
Query: 459 VSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVLAMVLLPSPKPEEMAKASISASGFH 515
VS +G WD LFGGGNLPAF+VGAV AA+S +L+MVLLPSP P+ + A+ S GFH
Sbjct: 2 VSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASGGGFH 172
>BP029340
Length = 402
Score = 60.1 bits (144), Expect = 9e-10
Identities = 26/45 (57%), Positives = 34/45 (74%)
Frame = -2
Query: 453 VIPQMIVSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVLAMVLLP 497
V PQM+VS +GPWD LFGGGN PAF V AV A +S ++A++ +P
Sbjct: 401 VFPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALISGLIAVLAIP 267
>AV420224
Length = 241
Score = 52.4 bits (124), Expect = 2e-07
Identities = 21/48 (43%), Positives = 31/48 (63%)
Frame = +1
Query: 268 PKNVFVELFGAFKELKKPMLMLMLVTSLNWIAWFPYVLYDTDWMGLEV 315
P V V L + + L M +++V +L W++WFP+ L+DTDWMG EV
Sbjct: 97 PGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREV 240
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 34.7 bits (78), Expect = 0.038
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 2 APPPPP----PNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQ 57
APPPPP P S T + +S S PA + PSP A AV S ++ V +L
Sbjct: 226 APPPPPASSPPPSPTHSPSSSPSPSAPTSPAATSTPPSPSASSSAVTSPSSAVSSTSSLS 405
Query: 58 LS 59
S
Sbjct: 406 FS 411
>AV418706
Length = 374
Score = 33.5 bits (75), Expect = 0.086
Identities = 19/49 (38%), Positives = 25/49 (50%)
Frame = +1
Query: 1 MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAG 49
MAPPPP + QN NS AP++ P H + A +A A +AG
Sbjct: 40 MAPPPPTSHYRRQNPNSTAPTAPPTVPVLHPLAAA--AATVAAAHSSAG 180
Score = 27.3 bits (59), Expect = 6.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 2 APPPPPPNSTTQNNNSIAPS 21
+PPPPPP+ + N++S P+
Sbjct: 304 SPPPPPPSPPSSNSHSPPPT 363
>AV406645
Length = 414
Score = 33.5 bits (75), Expect = 0.086
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 1 MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGP--SPLAKMIAVASIAAGVQFGWALQL 58
+ PPPPPPNS PSS P +H P S L K+ + S + W +
Sbjct: 34 VTPPPPPPNS--------QPSSSSTPPQRHTIKPHKSSLPKLTPLPSPPSSPSSPWNISR 189
Query: 59 SLLTP 63
+L +P
Sbjct: 190TLDSP 204
>TC12360 similar to UP|O22196 (O22196) At2g40820 protein, partial (11%)
Length = 1030
Score = 33.5 bits (75), Expect = 0.086
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
Frame = +3
Query: 3 PPPPPPNSTT-------QNNNSIAPSSFQVEPAQHAAGP----SPLAKMIAVASIAAG-V 50
PPPPPP S T +N+ + PS F + + A P P M A A +AAG V
Sbjct: 738 PPPPPPPSNTGYIPSFHPSNDGLGPSYFNMASSSSGAAPRQRGPPGFAMGAGAGLAAGAV 917
Query: 51 QFG 53
FG
Sbjct: 918 MFG 926
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.325 0.140 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,820,294
Number of Sequences: 28460
Number of extensions: 155424
Number of successful extensions: 3113
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of query: 515
length of database: 4,897,600
effective HSP length: 94
effective length of query: 421
effective length of database: 2,222,360
effective search space: 935613560
effective search space used: 935613560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0134.21