BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0125.11
(904 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 40 0.002
TC9746 39 0.005
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 39 0.005
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 39 0.005
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 38 0.008
TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like prot... 38 0.008
TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, p... 35 0.040
BP078507 35 0.053
TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA... 35 0.069
TC11455 similar to UP|Q9ZUS8 (Q9ZUS8) At2g37380 protein, partial... 34 0.12
TC17679 34 0.12
TC13276 similar to UP|Q8VX38 (Q8VX38) Telomere repeat binding fa... 33 0.15
TC11535 similar to AAS10009 (AAS10009) MYB transcription factor,... 33 0.15
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 33 0.20
TC15704 similar to UP|O22265 (O22265) Expressed protein (At2g474... 33 0.20
TC7989 similar to UP|Q43854 (Q43854) Peroxidase precursor , par... 33 0.20
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 33 0.20
TC13682 weakly similar to UP|AAS45124 (AAS45124) WAK-like kinase... 33 0.26
TC9027 weakly similar to UP|AAQ82447 (AAQ82447) SufB, partial (51%) 32 0.34
TC20069 similar to UP|Q9LKZ4 (Q9LKZ4) Receptor-like protein kina... 32 0.34
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 40.0 bits (92), Expect = 0.002
Identities = 52/202 (25%), Positives = 81/202 (39%), Gaps = 4/202 (1%)
Frame = +1
Query: 372 SPPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSV----RSSSKSVVDSDADLNS 427
SPP+ + P EP + P+ + SS RSSS + +A +
Sbjct: 220 SPPESRS------TTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLT 381
Query: 428 FDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTG 487
+ P A + + P + P +S+P+S +SS PN P + L + P
Sbjct: 382 APSCPPPASPAATAPAPSKTPPNPPT--NSSKPSSCKSSL----PNTTP--SSLSSAP-- 531
Query: 488 PSDPTSPITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHSVPRASERLVSRTTDTDSSS 547
PS TSPI+ +PE++ E + P P S S P + R S T +SS
Sbjct: 532 PSPTTSPISTPSSPENQ----EKPASTPPSAPPRSTSSSSSSPINTPRKPSSATKAPASS 699
Query: 548 VYTPISFPTNVADSSPSNNSES 569
P ++ S PS + +S
Sbjct: 700 ---PPGSELSLHHSPPSASRKS 756
Score = 37.0 bits (84), Expect = 0.014
Identities = 40/177 (22%), Positives = 60/177 (33%)
Frame = +1
Query: 349 PKRKHDETSKPDDGNDGDNDGGPSPPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTR 408
PK H T P +P K + P PAA +TPP
Sbjct: 298 PKSSHSSTPPPS------RSSSTTPKSKNATSLTAPSCPPPASPAATAPAPSKTPPNPPT 459
Query: 409 SSVRSSSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFF 468
+S + SS + +S + P S + P + + +PA+ S P SS
Sbjct: 460 NSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSAPPRSTSS-S 636
Query: 469 QPSPNEAPLWNMLQNQPTGPSDPTSPITIQYNPESEPLTLEPELTIPVQTEPEPRMS 525
SP P + S P S +++ ++P P T P + EP S
Sbjct: 637 SSSPINTPRKPSSATKAPASSPPGSELSLHHSP---PSASRKSSTTPKISSSEPSHS 798
>TC9746
Length = 637
Score = 38.5 bits (88), Expect = 0.005
Identities = 50/180 (27%), Positives = 67/180 (36%), Gaps = 3/180 (1%)
Frame = +2
Query: 530 PRASERLVSRTTDTDSSSVYTPISFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYL 589
P +S L T S P P++ A SSP++NSE ++ +
Sbjct: 140 PYSSLSLTWHTPSPTSKPKCQPPPHPSSTATSSPASNSEP--------PSGPNSPARWGT 295
Query: 590 TCP-SPRRYPGPRPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNH 648
P SP P L P P ++P PLA + P Q P P P H
Sbjct: 296 *APTSPSSSPSL*STTLTSP--PHSSSPHSTTSPLA-SSSASPCQSSP*SPSPPSPSPKH 466
Query: 649 SSVRSPN--PLVDTSEPHLGASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVPYTS 706
SP P S P+ +S P V +C S TS SS +SP + S P +S
Sbjct: 467 PHSPSPRSPPPASPSPPYFSSSAPPV-SCP--SSTATSLCQSSAAFSSPRGSTSPCPPSS 637
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 38.5 bits (88), Expect = 0.005
Identities = 47/182 (25%), Positives = 66/182 (35%), Gaps = 16/182 (8%)
Frame = +1
Query: 546 SSVYTPISFPTNVADSSPSNN-----------SESIRKFMEVRKEKVSTLEEYYLTCPSP 594
S VYTP S PT SP N S S K + + P+P
Sbjct: 4 SPVYTPPSIPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTP 183
Query: 595 RRYPGPRPERLVDPDEPILANPLHEADPL-AQQAQPDPVQQEPVQPDPEQSVSNHS---- 649
+ P P + P P +P+ + + + P P+ Q P P P ++ S S
Sbjct: 184 PKTPSPTSQPPYIPLPPKTPSPISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPH 363
Query: 650 SVRSPNPLVDTSEPHLGASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVPYTSLRP 709
+ PN S+P + P + P S +SS+ PTS N P T P
Sbjct: 364 TPTPPNTPSPISQPPYTPTPPKTPSPTNQPPHIPSPPNSSS-PTSQPPNTPSPPKTP-SP 537
Query: 710 TS 711
TS
Sbjct: 538 TS 543
Score = 28.5 bits (62), Expect = 4.9
Identities = 30/99 (30%), Positives = 33/99 (33%), Gaps = 8/99 (8%)
Frame = +1
Query: 432 PISAMLKRSTNPLTLIPESQP--------AAQTTSQPNSLRSSFFQPSPNEAPLWNMLQN 483
PIS T P T P SQP TSQP + PSP P +
Sbjct: 247 PISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNTPSPISQPPYT--PT 420
Query: 484 QPTGPSDPTSPITIQYNPESEPLTLEPELTIPVQTEPEP 522
P PS P I P S T +P T P P
Sbjct: 421 PPKTPSPTNQPPHIPSPPNSSSPTSQPPNTPSPPKTPSP 537
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 38.5 bits (88), Expect = 0.005
Identities = 62/247 (25%), Positives = 90/247 (36%), Gaps = 6/247 (2%)
Frame = +2
Query: 440 STNPLTLIPESQPA--AQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSDPTSPITI 497
S++P L P++ A + S P+S S+ PSP P GP P++P T
Sbjct: 194 SSSPWLLPPQTPTTSPAFSPSTPSSPPSTTTSPSPTSPP------RSTNGPQSPSAPST- 352
Query: 498 QYNPESEPLTLEPELTIPVQT-EPEPRMSDHSVPRASERLVSRTTDTDSSSVYTPISFPT 556
P + + P +T P S S PR+S R S T P + P
Sbjct: 353 --TPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPRSSTR--SPTAPPSPPQCTKPPAPPR 520
Query: 557 NVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANP 616
DSS S S + + R T PSP R P +P
Sbjct: 521 APPDSSTSPTSAAGKSDSAPRT----------TTAPSPLR-----------SSNP*RKSP 637
Query: 617 LHEADPLAQQAQPDPVQQEPVQPDPEQSVSN---HSSVRSPNPLVDTSEPHLGASEPHVQ 673
+ + P P QQ+P+ P P +S S+V +P + S P ++P
Sbjct: 638 TTSPSSRSVRFFPPP-QQKPLHPHPLSRISPPLCPSTVARSSPTL--SPPRRTRTQPSPT 808
Query: 674 TCDIGSP 680
T +G P
Sbjct: 809 TSTVG*P 829
Score = 33.9 bits (76), Expect = 0.12
Identities = 45/181 (24%), Positives = 67/181 (36%), Gaps = 7/181 (3%)
Frame = +2
Query: 356 TSKPDDGNDGDNDGGPS--PPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSVRS 413
TS P N + PS PP Q P+R + P TRS
Sbjct: 299 TSPPRSTNGPQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPRSSTRSPTAP 478
Query: 414 SSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSF-FQPSP 472
S P A ST+P + +S A +TT+ P+ LRSS + SP
Sbjct: 479 PSPPQCTKPP-------APPRAPPDSSTSPTSAAGKSDSAPRTTTAPSPLRSSNP*RKSP 637
Query: 473 NEAPLWNMLQNQPTGPSDPTSPITI-QYNPESEPLTL---EPELTIPVQTEPEPRMSDHS 528
+P ++ P P P + + +P P T+ P L+ P +T +P + +
Sbjct: 638 TTSPSSRSVRFFPPPQQKPLHPHPLSRISPPLCPSTVARSSPTLSPPRRTRTQPSPTTST 817
Query: 529 V 529
V
Sbjct: 818 V 820
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 37.7 bits (86), Expect = 0.008
Identities = 35/143 (24%), Positives = 59/143 (40%), Gaps = 3/143 (2%)
Frame = +1
Query: 354 DETSKPDDGNDGDNDGGPSPPKKKKKQVRLVVKPTRVEPAAQVVRRIE---TPPRVTRSS 410
++T P G+ + G P+PP P P A R + +PP T +
Sbjct: 226 NQTGSP*KGSTTSSSGAPTPP-----------TPHAASPGASACRSSQNQTSPPETTLTP 372
Query: 411 VRSSSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQP 470
SS+ + S + ++ LP S +PL+ P + P+ T+ P++ P
Sbjct: 373 PTSSAPATSASSSPPHT---LPKSPSPPPPPSPLSPPPPASPSPPPTASPSA-------P 522
Query: 471 SPNEAPLWNMLQNQPTGPSDPTS 493
SP+++P P+ PS P S
Sbjct: 523 SPSKSP-------TPSKPSPPQS 570
>TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like protein, complete
Length = 1794
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/74 (29%), Positives = 39/74 (51%), Gaps = 8/74 (10%)
Frame = +1
Query: 313 HEDTSSKIRQRRRKMVLEESSEESDVPLTKKKKAD--------QPKRKHDETSKPDDGND 364
HE ++ K ++++ K +E +EE DVPL + D + K+K E+++ + +
Sbjct: 1504 HEPSADKKKEKKEKKKKKEKNEEKDVPLLADEDGDEEKEVVKKEKKKKRKESTENVELQN 1683
Query: 365 GDNDGGPSPPKKKK 378
GD D G K+KK
Sbjct: 1684 GD-DAGEKKKKRKK 1722
>TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, partial
(57%)
Length = 1185
Score = 35.4 bits (80), Expect = 0.040
Identities = 43/167 (25%), Positives = 66/167 (38%), Gaps = 3/167 (1%)
Frame = +2
Query: 403 PPRVTRSSVRSSSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNS 462
PP R + S+ V + A ++ +RST T P S TS P
Sbjct: 254 PPSPARLTPLPSASPVTTTSTPPTPSPAATNASPSRRSTTTTTTPPTSPTPMLLTSPPMK 433
Query: 463 LRS--SFFQPSPN-EAPLWNMLQNQPTGPSDPTSPITIQYNPESEPLTLEPELTIPVQTE 519
L+ +F P P +AP+ L PT S P+S I+ P+LT T
Sbjct: 434 LKPLPGYFLPLPTPKAPISTPLTT-PTPKSTPSSSIS-------------PKLTRQSITA 571
Query: 520 PEPRMSDHSVPRASERLVSRTTDTDSSSVYTPISFPTNVADSSPSNN 566
P P + L S TT T + + + IS P +++ ++ + N
Sbjct: 572 PPPPTESFRCNHRARSLQSSTTTTTTLTTKS-ISLPLSLSLTTTTLN 709
>BP078507
Length = 414
Score = 35.0 bits (79), Expect = 0.053
Identities = 27/92 (29%), Positives = 34/92 (36%)
Frame = -1
Query: 579 EKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQ 638
+K S+ E Y P+P P P P P P A P + QP P +P
Sbjct: 315 DKQSSPESY----PTPLHSPQPSPNA---PTSPYPAPSSQLRPPPSTSHQPPPTLLQPTS 157
Query: 639 PDPEQSVSNHSSVRSPNPLVDTSEPHLGASEP 670
P S SS P P + PH +S P
Sbjct: 156 DTPSPSPPPPSSPNPPPPHHSPNPPHPPSSSP 61
>TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA helicase,
partial (5%)
Length = 565
Score = 34.7 bits (78), Expect = 0.069
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 305 VQKKIAPAHEDT--SSKIRQRRRKMVLEESSEESDVPLTKKKKADQPKRKHDETSKPDDG 362
VQ I ED SS + + +E + D KK+ D +H E + G
Sbjct: 102 VQNLIMAEPEDNLQSSPMVETENNKKKKEKKNKHD----KKRPRDVANEEHAEEEEEQIG 269
Query: 363 NDGDNDGGPSPPKKKKK 379
N+ D DG S KKKKK
Sbjct: 270 NNSDRDGESSKKKKKKK 320
>TC11455 similar to UP|Q9ZUS8 (Q9ZUS8) At2g37380 protein, partial (10%)
Length = 575
Score = 33.9 bits (76), Expect = 0.12
Identities = 33/121 (27%), Positives = 46/121 (37%), Gaps = 5/121 (4%)
Frame = +2
Query: 423 ADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPN-EAPLWNML 481
A+L ALP+++ K S+ T +P S +A ++S P P P E PL
Sbjct: 185 ANLPPHSALPMNSSTKASSYLSTFLPASPWSAPSSSPPPPPHPPPHPPPPPLETPLAAAH 364
Query: 482 QNQPTGPSDPT----SPITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHSVPRASERLV 537
+ T PS PT +P Q S T T + P R + P L
Sbjct: 365 PSTATSPSSPTATPPAPAPSQRTTSSSDFTSTTATTTTHYSNPTSRKLTSTSPSPDSPLF 544
Query: 538 S 538
S
Sbjct: 545 S 547
>TC17679
Length = 585
Score = 33.9 bits (76), Expect = 0.12
Identities = 33/101 (32%), Positives = 44/101 (42%), Gaps = 10/101 (9%)
Frame = +2
Query: 432 PISAMLKRSTNPLTLIPESQPAAQTTSQPN---SLRSSFFQ-PSPNEAPLWNML-QNQPT 486
P A L +T LTLI + QPAA T QP + +F + P+PN P + +
Sbjct: 260 PPPATLTPTTFNLTLIHKHQPAATRTPQPQHPPTCNLTFTRTPTPNRNPRTRTCRRGRRK 439
Query: 487 GPSDPTS-----PITIQYNPESEPLTLEPELTIPVQTEPEP 522
+ P S PI + NP L +P P QT P P
Sbjct: 440 SRA*P*SRLI*KPINPESNPSIPTLNRKPTPNPPEQTNPPP 562
>TC13276 similar to UP|Q8VX38 (Q8VX38) Telomere repeat binding factor 2,
partial (21%)
Length = 579
Score = 33.5 bits (75), Expect = 0.15
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +2
Query: 799 AEEARRKQEQAEEAARQAAAQAEQARLEAERLEAEAEARRLAPVVFTPAA 848
A+EA +A A A AQAE A EAE EAEAEA + VF AA
Sbjct: 47 AQEAAAAAAKAVVEAELAVAQAEAAAREAEAAEAEAEAAQ----VFAKAA 184
>TC11535 similar to AAS10009 (AAS10009) MYB transcription factor, partial
(17%)
Length = 559
Score = 33.5 bits (75), Expect = 0.15
Identities = 19/37 (51%), Positives = 23/37 (61%)
Frame = +3
Query: 800 EEARRKQEQAEEAARQAAAQAEQARLEAERLEAEAEA 836
+EA +A E A A A+AE+A EAE EAEAEA
Sbjct: 36 QEAAAVAARAVEEAEAAIAEAEEAAREAEAAEAEAEA 146
Score = 30.4 bits (67), Expect = 1.3
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 798 AAEEARRKQEQAEEAARQAAAQAEQARLEAERLEAEAEA 836
A EEA +AEEAAR +AE A EAE EA A+A
Sbjct: 63 AVEEAEAAIAEAEEAAR----EAEAAEAEAEAAEAFAQA 167
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 33.1 bits (74), Expect = 0.20
Identities = 32/145 (22%), Positives = 58/145 (39%), Gaps = 5/145 (3%)
Frame = +1
Query: 371 PSPPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSVRSSSKSVVDSDADLNSFDA 430
P PP ++ + P + E PP +S +S + S + + N
Sbjct: 76 PPPPSQQPTHSPSTSPTSTTTPPPSPTKVTENPPTAPSTSTKSPTSSASEEPSPPN---- 243
Query: 431 LPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSD 490
P ++ ++ + P S PA+ + S P S + SP+ +PL + ++ PT P+
Sbjct: 244 -PSTSTTQQPKHS----PTSPPASPSPSPP-STKPPTAMASPSTSPL-SATKSHPTPPAA 402
Query: 491 PTS-----PITIQYNPESEPLTLEP 510
P++ P T S P + P
Sbjct: 403 PSASSTPPPTTTSLKTMSSPSSSTP 477
Score = 32.0 bits (71), Expect = 0.45
Identities = 37/172 (21%), Positives = 57/172 (32%), Gaps = 6/172 (3%)
Frame = +1
Query: 541 TDTDSSSVYTPISFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGP 600
T + SSS Y+P P+ SPS T P+ P P
Sbjct: 43 TSSSSSSSYSPPPPPSQQPTHSPS-------------------------TSPTSTTTPPP 147
Query: 601 RPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNH------SSVRSP 654
P ++ + NP A + ++ +EP P+P S + S SP
Sbjct: 148 SPTKVTE-------NP-PTAPSTSTKSPTSSASEEPSPPNPSTSTTQQPKHSPTSPPASP 303
Query: 655 NPLVDTSEPHLGASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVPYTS 706
+P +++P + P T A S T P T S+ +S
Sbjct: 304 SPSPPSTKPPTAMASPSTSPLSATKSHPTPPAAPSASSTPPPTTTSLKTMSS 459
>TC15704 similar to UP|O22265 (O22265) Expressed protein
(At2g47450/T30B22.25), partial (25%)
Length = 664
Score = 33.1 bits (74), Expect = 0.20
Identities = 29/94 (30%), Positives = 39/94 (40%)
Frame = -1
Query: 470 PSPNEAPLWNMLQNQPTGPSDPTSPITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHSV 529
P AP W + NQPT P+ PTSP +P+ P P +T PR
Sbjct: 361 PHSPRAPKW-AVPNQPT*PTAPTSP-----HPQLSGQPPPP----PPRTPAPPRNPSPDP 212
Query: 530 PRASERLVSRTTDTDSSSVYTPISFPTNVADSSP 563
P + +R S++ TP S P+ A SP
Sbjct: 211 PPQTSHSPTRFHHRPSTARDTPNSHPSPSAPISP 110
>TC7989 similar to UP|Q43854 (Q43854) Peroxidase precursor , partial (85%)
Length = 1352
Score = 33.1 bits (74), Expect = 0.20
Identities = 24/71 (33%), Positives = 35/71 (48%), Gaps = 2/71 (2%)
Frame = +1
Query: 642 EQSVSNHSSVRSPNPLVDTSEPHLGASEPHVQTCDIGSPQGTSEAHSSNHP--TSPETNL 699
E+S +S SP+ ++ +S+ + P D SPQG S +S HP T P ++
Sbjct: 412 EESCPVPTSPPSPHEMLFSSQGDQTMNSP*EGEMD*TSPQGMSPWITSQHPKATPPPSST 591
Query: 700 SIVPYTSLRPT 710
P TS RPT
Sbjct: 592 HSPPKTSTRPT 624
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 33.1 bits (74), Expect = 0.20
Identities = 33/128 (25%), Positives = 56/128 (42%), Gaps = 7/128 (5%)
Frame = -3
Query: 304 LVQKKIAPAHEDTSSKIRQRRRKMVLEESSEESDVPL-----TKKKKADQPKRKHDETSK 358
L Q K A A E+ S + + EE +E+ P T K QP+ + D ++
Sbjct: 800 LSQVKHAAAEEEELSSEEEGSSE---EEEEDETTAPAPPAATTSHTKPPQPEPESDSATQ 630
Query: 359 PDDGNDGDNDGGP--SPPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSVRSSSK 416
D +D D+D P S P K VKP +P Q + + + + + +S++K
Sbjct: 629 SDSESDTDSDQAPSASAPTPNPK-----VKPLATKPMDQ-TQTHKPKAQPSPAPAKSAAK 468
Query: 417 SVVDSDAD 424
+S+A+
Sbjct: 467 RAAESNAN 444
>TC13682 weakly similar to UP|AAS45124 (AAS45124) WAK-like kinase, partial
(14%)
Length = 406
Score = 32.7 bits (73), Expect = 0.26
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Frame = -2
Query: 601 RPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNHSSVRSPNPLVDT 660
R +R D P + P +A PDP +++ +++R P PLV+
Sbjct: 387 RRDRAATTDAPTVIPPTRTPTLIAFPHPPDP---------SVEALH*ETNLRQPVPLVNP 235
Query: 661 SEPHLGASEPHVQTC---------DIGSPQGTSEAHSSNHPTSPETNLSIVPYTS-LRPT 710
S P + H + C + P+ +A SS+HP S N S + +TS L PT
Sbjct: 234 S-PTKPSRHRHRKPCLCPARWTSVQVALPEQL-QAPSSHHPNSTT*N*SEISFTSLLLPT 61
Query: 711 SLSECINV 718
+++E N+
Sbjct: 60 AIAENKNL 37
>TC9027 weakly similar to UP|AAQ82447 (AAQ82447) SufB, partial (51%)
Length = 1016
Score = 32.3 bits (72), Expect = 0.34
Identities = 21/85 (24%), Positives = 36/85 (41%)
Frame = +2
Query: 614 ANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNHSSVRSPNPLVDTSEPHLGASEPHVQ 673
A+P + +PLA +P + Q P + +N SS +P PL PH
Sbjct: 71 ASPPYLLNPLATSTSANPTSTQTSQSPPPATTTNPSSESAPTPL----------PPPHPP 220
Query: 674 TCDIGSPQGTSEAHSSNHPTSPETN 698
S + ++ A ++ + SP T+
Sbjct: 221 PPTTKSARSSATATTTRNSASPSTS 295
>TC20069 similar to UP|Q9LKZ4 (Q9LKZ4) Receptor-like protein kinase 3,
partial (14%)
Length = 517
Score = 32.3 bits (72), Expect = 0.34
Identities = 32/119 (26%), Positives = 50/119 (41%), Gaps = 1/119 (0%)
Frame = +1
Query: 608 PDEPILANPLHEADPLAQQA-QPDPVQQEPVQPDPEQSVSNHSSVRSPNPLVDTSEPHLG 666
P P + P A P A + P PV P S+++HSS SP+P +G
Sbjct: 199 PQPPTVPGPA*PATPAATSSLSTSPASASPVL-SPPTSLTSHSSPTSPSPT-------MG 354
Query: 667 ASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVPYTSLRPTSLSECINVFNREASL 725
+ +P + C + SP ++ S PT+ S+ + S R + S + E SL
Sbjct: 355 SLDPSHRRC-LQSP----DSGFSTSPTTASMAPSLPSFPSSRTSRFSTSTTIT*PEFSL 516
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,007,351
Number of Sequences: 28460
Number of extensions: 204516
Number of successful extensions: 1606
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of query: 904
length of database: 4,897,600
effective HSP length: 99
effective length of query: 805
effective length of database: 2,080,060
effective search space: 1674448300
effective search space used: 1674448300
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0125.11