BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0100c.1
(773 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14267 similar to UP|O22403 (O22403) ADL2 protein, partial (15%) 278 3e-75
BP058190 251 3e-67
TC10389 homologue to UP|Q39821 (Q39821) SDL12A, partial (37%) 243 6e-65
TC12933 homologue to UP|Q39821 (Q39821) SDL12A, partial (33%) 206 1e-53
BP065711 137 8e-33
TC17321 similar to PIR|D84514|D84514 dynamin-like protein [impor... 119 1e-27
TC11027 homologue to UP|Q39828 (Q39828) SDL5A, partial (44%) 118 3e-27
AV408334 112 3e-25
AV420767 84 1e-16
AU251970 62 3e-10
AV427660 59 3e-09
TC13228 homologue to UP|Q9LNN8 (Q9LNN8) F8L10.1 protein, partial... 54 9e-08
BP058074 51 8e-07
TC9419 similar to UP|Q8S3C8 (Q8S3C8) Dynamin-like protein C, par... 38 0.007
BP065772 36 0.020
TC19504 similar to UP|Q9SV89 (Q9SV89) Isoleucine-tRNA ligase-lik... 30 1.9
TC18473 28 5.6
BP043596 28 7.3
BP040648 28 7.3
TC14742 similar to UP|Q9XFC0 (Q9XFC0) Cytosolic ascorbate peroxi... 28 7.3
>TC14267 similar to UP|O22403 (O22403) ADL2 protein, partial (15%)
Length = 1194
Score = 278 bits (710), Expect = 3e-75
Identities = 135/171 (78%), Positives = 154/171 (89%), Gaps = 1/171 (0%)
Frame = +1
Query: 601 NRVYVKENTSTKPHAEPVHNV-QSSSTIHLREPPPVLRPSESNSEMEGVEITVTKLLLRS 659
+R+ VKEN ++KPH EPVH+V QS S IHLREPP +LRPSESNSE E +EITVTKLLL+S
Sbjct: 1 SRMSVKENIASKPHTEPVHSVEQSFSMIHLREPPTILRPSESNSETEAIEITVTKLLLKS 180
Query: 660 YYDIARKNIEDLVPKAIMHFLVNNTKRELHNVFIEKLYREDLFEEMLQEPAEVAAKRKRC 719
YYDI RKN+ED +PKAIMHFLVNNTKRELHNVFI+KLYR++LFEEMLQEP E+A KRKRC
Sbjct: 181 YYDIVRKNVEDFIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPEEIAMKRKRC 360
Query: 720 RELLRAYQQAFRDLDELPLEAETVERGYGSPEATGLPRIRGLPSSSMYSSS 770
RELLRAYQQAF+DL+ELP+EAETVERGY PE TGLP+I GLPSS+MYSSS
Sbjct: 361 RELLRAYQQAFKDLEELPMEAETVERGYSLPETTGLPKIHGLPSSTMYSSS 513
>BP058190
Length = 607
Score = 251 bits (641), Expect = 3e-67
Identities = 133/162 (82%), Positives = 144/162 (88%), Gaps = 4/162 (2%)
Frame = +2
Query: 10 TAASTAATPLGSSVISLVNRLQDIFSRVGNQSTIIDLPQVAVVGSQSSGKSSVLESLVGR 69
++++ A PLGS+VISLVNRLQDIFSRVG+QSTI DLPQVAVVGSQSSGKSSVLE+LVGR
Sbjct: 125 SSSTPPAAPLGSTVISLVNRLQDIFSRVGSQSTI-DLPQVAVVGSQSSGKSSVLEALVGR 301
Query: 70 DFLPRGTDICTRRPLVLQLVHTKP----SHPEFGEFLHLPGRKFHDFTQIRHEIQAETDR 125
DFLPRG +ICTRRPLVLQLV TK S E+GEFLHLPGRKF DF+ IR EIQAETDR
Sbjct: 302 DFLPRGNEICTRRPLVLQLVQTKKNPDGSDEEYGEFLHLPGRKFFDFSDIRREIQAETDR 481
Query: 126 EAGENKGVSEKQIRLKIFSPNVLDITLVDLPGITKVPVGDQP 167
EAG NKGVS+KQIRLKIFSP VLDITLVDLPGITKVPVGDQP
Sbjct: 482 EAGGNKGVSDKQIRLKIFSPTVLDITLVDLPGITKVPVGDQP 607
>TC10389 homologue to UP|Q39821 (Q39821) SDL12A, partial (37%)
Length = 1008
Score = 243 bits (621), Expect = 6e-65
Identities = 124/220 (56%), Positives = 164/220 (74%), Gaps = 7/220 (3%)
Frame = +1
Query: 22 SVISLVNRLQDIFSRVGNQS------TIID-LPQVAVVGSQSSGKSSVLESLVGRDFLPR 74
++ISLVN++Q + +G+ T+ D LP +AVVG QSSGKSSVLES+VG+DFLPR
Sbjct: 94 NLISLVNKIQRACTALGDHGEATALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPR 273
Query: 75 GTDICTRRPLVLQLVHTKPSHPEFGEFLHLPGRKFHDFTQIRHEIQAETDREAGENKGVS 134
G+ I TRRPLVLQL + E+GEFLHLP +KF+DF +R EIQ ETDRE G ++ +S
Sbjct: 274 GSGIVTRRPLVLQLQKIEEGSREYGEFLHLPKKKFYDFAAVRKEIQDETDRETGRSRMIS 453
Query: 135 EKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKIPTCLILAVTP 194
I L I+SPNV+++TL+DLPG+TKV V QP I I M+ SYI+ P C+ILA+TP
Sbjct: 454 SVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVHDIEDMVRSYIEKPNCIILAITP 633
Query: 195 ANSDLANSDALQMAQVADPDGNRTIGVITKLDIMDRGTDA 234
AN DLA SDA+++++ DP+G RTIGV+TK+D+MD+GTDA
Sbjct: 634 ANQDLATSDAIKISREVDPNGERTIGVLTKIDLMDKGTDA 753
>TC12933 homologue to UP|Q39821 (Q39821) SDL12A, partial (33%)
Length = 603
Score = 206 bits (524), Expect = 1e-53
Identities = 108/202 (53%), Positives = 142/202 (69%), Gaps = 7/202 (3%)
Frame = +1
Query: 24 ISLVNRLQDIFSRVGNQS------TIID-LPQVAVVGSQSSGKSSVLESLVGRDFLPRGT 76
I LVN++Q + +G+ T+ D LP +AVVG QSSGKSSVLES+VG+DFLPRG+
Sbjct: 1 IQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGS 180
Query: 77 DICTRRPLVLQLVHTKPSHPEFGEFLHLPGRKFHDFTQIRHEIQAETDREAGENKGVSEK 136
I TRRPLVLQL H E+ EF+HLP ++F DF +R EI ETDRE G +KG+S
Sbjct: 181 GIVTRRPLVLQL-HKIDDSREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSV 357
Query: 137 QIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKIPTCLILAVTPAN 196
I L I+SPNV+++TLVDLPG+TKV V QP I I M+ ++I+ P C+ILA++PAN
Sbjct: 358 PIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKPNCIILAISPAN 537
Query: 197 SDLANSDALQMAQVADPDGNRT 218
DLA SDA+++++ DP G RT
Sbjct: 538 QDLATSDAIKISREVDPKGERT 603
>BP065711
Length = 524
Score = 137 bits (344), Expect = 8e-33
Identities = 74/133 (55%), Positives = 94/133 (70%), Gaps = 8/133 (6%)
Frame = +3
Query: 22 SVISLVNRLQDIFSRVGNQS-------TIID-LPQVAVVGSQSSGKSSVLESLVGRDFLP 73
++ISLVN++Q + +G+ T+ D LP +AVVG QSSGKSSVLES+VG+DFLP
Sbjct: 126 NLISLVNKIQRACTALGDHGEEASALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLP 305
Query: 74 RGTDICTRRPLVLQLVHTKPSHPEFGEFLHLPGRKFHDFTQIRHEIQAETDREAGENKGV 133
RG+ I TRRPLVLQL + E+GEFLHLP +KF+DF +R EIQ ETDRE G +K +
Sbjct: 306 RGSGIVTRRPLVLQLHKIEEGSREYGEFLHLPRKKFYDFVAVRKEIQDETDRETGRSKQI 485
Query: 134 SEKQIRLKIFSPN 146
S I L I+SPN
Sbjct: 486 SSVPIHLSIYSPN 524
>TC17321 similar to PIR|D84514|D84514 dynamin-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(4%)
Length = 587
Score = 119 bits (299), Expect = 1e-27
Identities = 59/60 (98%), Positives = 59/60 (98%)
Frame = +2
Query: 714 AKRKRCRELLRAYQQAFRDLDELPLEAETVERGYGSPEATGLPRIRGLPSSSMYSSSLGD 773
AKRKRCRELLRAY QAFRDLDELPLEAETVERGYGSPEATGLPRIRGLPSSSMYSSSLGD
Sbjct: 2 AKRKRCRELLRAYPQAFRDLDELPLEAETVERGYGSPEATGLPRIRGLPSSSMYSSSLGD 181
>TC11027 homologue to UP|Q39828 (Q39828) SDL5A, partial (44%)
Length = 826
Score = 118 bits (296), Expect = 3e-27
Identities = 76/261 (29%), Positives = 136/261 (51%), Gaps = 3/261 (1%)
Frame = +1
Query: 214 DGNRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIQMNRSIKDALVAE 273
+G RTIGV+TK+D+MD+GTDA ++L G+ L+ ++GVVNRSQ DI N + A +E
Sbjct: 16 NGERTIGVLTKIDLMDKGTDAVDMLEGRAYKLKFPWIGVVNRSQADINKNVDMIAARRSE 195
Query: 274 EEFFRSRPVYSGLADSCGVPQLAKKLNKILAQHIKAVLPGLKARISTSLVALAKEHASYG 333
++F + P Y LA G LAK L+K L I++ +PG+++ I+ ++ L E + G
Sbjct: 196 RDYFSNTPEYRHLAHRMGSEHLAKMLSKHLETVIQSKIPGIQSLINKTIAELEAELSRLG 375
Query: 334 E-ITESKAGQGALVLNILSKYCDAFSSMLEGKNKEMSTCELSGGARIHYIFQSIYVRSLE 392
+ I G+ ++ I + F L+G GG +I+ +F + +L+
Sbjct: 376 KPIAAEDGGKLYAIMEICRSFDQIFKDHLDGVR--------PGGDKIYNVFDNQLPAALK 531
Query: 393 AVDPCEDLTDDDIRTALQNATGPKSALFIPEVPFEIFVRRQISRLLDPSLQCARFIYDEL 452
+ + L+ ++IR + A G + L PE + + ++ + P+ ++ L
Sbjct: 532 RLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLTTIRGPAEAAVDTVHSLL 711
Query: 453 MKISHRCM--FTELQRFPFLR 471
+ H+ + EL+++P LR
Sbjct: 712 KDLVHKAISETLELKQYPGLR 774
>AV408334
Length = 384
Score = 112 bits (279), Expect = 3e-25
Identities = 61/110 (55%), Positives = 76/110 (68%), Gaps = 5/110 (4%)
Frame = +2
Query: 21 SSVISLVNRLQDIFSRVGNQ-----STIIDLPQVAVVGSQSSGKSSVLESLVGRDFLPRG 75
+S+I L+N++Q + +G+ S LP VAVVG QSSGKSSVLES+VGRDFLPRG
Sbjct: 53 TSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRG 232
Query: 76 TDICTRRPLVLQLVHTKPSHPEFGEFLHLPGRKFHDFTQIRHEIQAETDR 125
+ I TRRPLVLQL + E+ EFLH+P +KF DF +R EI ETDR
Sbjct: 233 SGIVTRRPLVLQLHKVEQGQQEYAEFLHMPRKKFTDFAAVRKEIADETDR 382
>AV420767
Length = 244
Score = 83.6 bits (205), Expect = 1e-16
Identities = 40/79 (50%), Positives = 55/79 (68%)
Frame = +3
Query: 115 IRHEIQAETDREAGENKGVSEKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARI 174
+R EIQ ETDR G+ K +S I L I+SPNV+++TLVDLPG+TKV V QP I I
Sbjct: 6 VRQEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPESIVQEI 185
Query: 175 RTMIMSYIKIPTCLILAVT 193
TM+ +Y++ P +ILA++
Sbjct: 186 ETMVRTYVEKPNSIILAIS 242
>AU251970
Length = 309
Score = 62.4 bits (150), Expect = 3e-10
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2
Query: 640 ESNSEMEGVEITVTKLLLRSYYDIARKNIEDLVPKA 675
ESNSE E +EITVTKLLL+SYYDI RKN+ED +PKA
Sbjct: 200 ESNSETEAIEITVTKLLLKSYYDIVRKNVEDFIPKA 307
>AV427660
Length = 210
Score = 58.9 bits (141), Expect = 3e-09
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 84 LVLQLVHTKPSHPEFGEFLHLPGRKFHDFTQIRHEIQAETDREAGENKGVSEKQIRLKIF 143
L LQL + E+ EFLHLP +F DF+ +R EI+ ETD+ + +S L I+
Sbjct: 2 LELQLHKIEEGLQEYAEFLHLPNTRFTDFSMVRKEIEDETDKTTPTSNQISPVPTHLTIY 181
Query: 144 SPNVLDITL 152
SPNV+++TL
Sbjct: 182 SPNVVNLTL 208
>TC13228 homologue to UP|Q9LNN8 (Q9LNN8) F8L10.1 protein, partial (11%)
Length = 421
Score = 53.9 bits (128), Expect = 9e-08
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +2
Query: 18 PLGSSVISLVNRLQDIFSRVGNQSTIIDLPQVAVVGSQSSGKSSVLESLVGRDFLPRGTD 77
P +S NRLQ G + +P++ VG QS GKSS+LE+L+G F R +
Sbjct: 146 PDSTSRFEAYNRLQAAAVAFGET---LPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVE 316
Query: 78 ICTRRPLVLQLVH 90
+ TRRPL+LQ++H
Sbjct: 317 MGTRRPLILQMLH 355
>BP058074
Length = 575
Score = 50.8 bits (120), Expect = 8e-07
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +1
Query: 49 VAVVGSQSSGKSSVLESLVGRDFLPRGTDICTRRPLVLQLVHTKPSHPEFGEFLHLPGRK 108
V +G +GKS+VL SL+G LP G + TR P+ + L S + + +
Sbjct: 238 VVALGGVGAGKSAVLNSLIGHPVLPTGENGATRAPICIDL-QRDTSLSSKSIIIQIDNKS 414
Query: 109 FH-DFTQIRHEIQAETDREAGENKGVSEKQIRLKIFSPNVLDITLVDLPGI 158
T +RH +Q DR + + G S QI LK+ + + LVDLPG+
Sbjct: 415 QQVSATALRHSLQ---DRLSKGSTGKSRDQILLKLRTSTAPPLKLVDLPGL 558
>TC9419 similar to UP|Q8S3C8 (Q8S3C8) Dynamin-like protein C, partial (16%)
Length = 565
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 657 LRSYYDIARKNIEDLVPKAIMHFLVNNTKRELHNVFIEKLYREDLFE--EMLQEPAEVAA 714
+ +Y ++ +++ +PKA+++ V KR L N F ++ +++ + ML E +
Sbjct: 38 VNAYINMVCDTLKNTIPKAVVYCQVREAKRSLLNYFYVQVGKKEKEKLGAMLDEDPALME 217
Query: 715 KRKRCRELLRAYQQAFRDLDEL 736
KR + + L Y+QA D+D +
Sbjct: 218 KRTQIAKRLELYKQARDDIDSV 283
>BP065772
Length = 495
Score = 36.2 bits (82), Expect = 0.020
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 49 VAVVGSQSSGKSSVLESLVGRDFLPRGTDICTRRPLVLQL 88
V +G+ +GKS+ L SL+G LP G + TR P+ ++L
Sbjct: 220 VVALGNVGAGKSAALNSLIGHPVLPTGENGATRAPISIEL 339
>TC19504 similar to UP|Q9SV89 (Q9SV89) Isoleucine-tRNA ligase-like protein
, partial (11%)
Length = 491
Score = 29.6 bits (65), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = -2
Query: 536 LDALESDKGLASERNGKSRGIIARQANGVVADHGVRGASDV-----EKVAPSGNAGGSSW 590
L L+S+ + +G++ + A A VVA HG+ DV E VA AGG W
Sbjct: 394 LTLLDSELLVDLVLDGEAVAVPAEAARDVVAGHGLVAGDDVFDCAGEDVAVVREAGGEGW 215
Query: 591 RI 592
+
Sbjct: 214 AV 209
>TC18473
Length = 509
Score = 28.1 bits (61), Expect = 5.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 566 ADHGVRGASDVEKVAPSGNAGGSSWRISSIFGGRDNRVYVKENTS 610
ADHG EKVA + ++G SWRI +D+R TS
Sbjct: 94 ADHG-------EKVAENRSSGKVSWRILKALSCKDHRSVAVTTTS 207
>BP043596
Length = 569
Score = 27.7 bits (60), Expect = 7.3
Identities = 21/78 (26%), Positives = 36/78 (45%)
Frame = +3
Query: 266 IKDALVAEEEFFRSRPVYSGLADSCGVPQLAKKLNKILAQHIKAVLPGLKARISTSLVAL 325
I+ A+V F V + DSC + L + + +HI+ L + RI+ S V+
Sbjct: 291 IRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSS 470
Query: 326 AKEHASYGEITESKAGQG 343
+E A Y S++ +G
Sbjct: 471 FRE-AIYKVKCRSESSEG 521
>BP040648
Length = 497
Score = 27.7 bits (60), Expect = 7.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 618 VHNVQSSSTIHLREPPPVLRPSES 641
V N+ SS+T+H PPP+LR ++
Sbjct: 82 VVNLHSSATVHSPPPPPLLRRQQN 153
>TC14742 similar to UP|Q9XFC0 (Q9XFC0) Cytosolic ascorbate peroxidase,
complete
Length = 1256
Score = 27.7 bits (60), Expect = 7.3
Identities = 14/53 (26%), Positives = 25/53 (46%)
Frame = -2
Query: 280 RPVYSGLADSCGVPQLAKKLNKILAQHIKAVLPGLKARISTSLVALAKEHASY 332
+P+ ++ CG P LA L ++ LPG K + +++ A AS+
Sbjct: 523 KPIR*NMSRRCGTPCLASGSRPSLVDIFESFLPGTKLIVGPPVISTATTPASW 365
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.135 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,010,617
Number of Sequences: 28460
Number of extensions: 140755
Number of successful extensions: 787
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of query: 773
length of database: 4,897,600
effective HSP length: 97
effective length of query: 676
effective length of database: 2,136,980
effective search space: 1444598480
effective search space used: 1444598480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0100c.1