BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0081b.1
(360 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16823 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like prote... 448 e-127
TC15163 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like prote... 289 4e-79
AV420901 181 1e-46
AV416299 60 7e-10
AV766719 55 1e-08
AV422148 50 4e-07
TC16172 similar to UP|Q97HY8 (Q97HY8) Uncharacterized secreted p... 33 0.057
AV768270 32 0.13
CB827058 32 0.17
TC18261 similar to UP|WSC2_YEAST (P53832) Cell wall integrity an... 32 0.22
TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%) 25 0.36
TC12355 similar to UP|PR18_HUMAN (Q99633) Pre-mRNA splicing fact... 30 0.63
TC18555 similar to GB|AAP68307.1|31711902|BT008868 At2g33570 {Ar... 29 1.1
TC15376 weakly similar to UP|Q7SYH2 (Q7SYH2) Cystatin domain fet... 29 1.1
TC9027 weakly similar to UP|AAQ82447 (AAQ82447) SufB, partial (51%) 29 1.4
TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protei... 28 1.8
BP038802 25 2.2
TC9953 similar to GB|CAD35362.1|21535744|ATH490171 FK506 binding... 28 2.4
TC9149 similar to UP|Q8LSK7 (Q8LSK7) Auxin-regulated protein, pa... 28 3.1
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 28 3.1
>TC16823 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like protein, partial
(29%)
Length = 711
Score = 448 bits (1152), Expect = e-127
Identities = 224/224 (100%), Positives = 224/224 (100%)
Frame = +3
Query: 1 MAALSWRPFILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDVV 60
MAALSWRPFILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDVV
Sbjct: 39 MAALSWRPFILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDVV 218
Query: 61 STRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGLLPSDHFSVT 120
STRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGLLPSDHFSVT
Sbjct: 219 STRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGLLPSDHFSVT 398
Query: 121 VTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKRSEILEVKGG 180
VTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKRSEILEVKGG
Sbjct: 399 VTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKRSEILEVKGG 578
Query: 181 GEDGGEIEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQS 224
GEDGGEIEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQS
Sbjct: 579 GEDGGEIEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQS 710
>TC15163 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like protein, partial
(28%)
Length = 612
Score = 289 bits (740), Expect = 4e-79
Identities = 144/144 (100%), Positives = 144/144 (100%)
Frame = +2
Query: 217 NYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEV 276
NYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEV
Sbjct: 2 NYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEV 181
Query: 277 EDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDYLAKLLFW 336
EDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDYLAKLLFW
Sbjct: 182 EDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDYLAKLLFW 361
Query: 337 CMLLGHHLRGLENRLQLSCVVGLL 360
CMLLGHHLRGLENRLQLSCVVGLL
Sbjct: 362 CMLLGHHLRGLENRLQLSCVVGLL 433
>AV420901
Length = 315
Score = 181 bits (460), Expect = 1e-46
Identities = 90/91 (98%), Positives = 90/91 (98%)
Frame = +2
Query: 94 SDAARDSMKQTISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTR 153
S AARDSMKQTISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTR
Sbjct: 41 SAAARDSMKQTISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTR 220
Query: 154 NLDIASPCGARDSDCEKRSEILEVKGGGEDG 184
NLDIASPCGARDSDCEKRSEILEVKGGGEDG
Sbjct: 221 NLDIASPCGARDSDCEKRSEILEVKGGGEDG 313
Score = 43.9 bits (102), Expect = 4e-05
Identities = 17/18 (94%), Positives = 18/18 (99%)
Frame = +1
Query: 19 PNPLHPPKPPPLFLRRRR 36
PNPLHPPKPPPLFLRRR+
Sbjct: 1 PNPLHPPKPPPLFLRRRQ 54
>AV416299
Length = 403
Score = 59.7 bits (143), Expect = 7e-10
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = +3
Query: 188 EVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDR 247
+V D+ ++DL G++ +A YI LQS L+++K+EL+ K++ L+ +
Sbjct: 87 KVHEDVDIQDL----------GEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQ 236
Query: 248 GI---RNNLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNILS 289
+ +N+LL+YLRSL PE V +LS +S E+++II +V +L+
Sbjct: 237 FVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLA 371
>AV766719
Length = 511
Score = 55.5 bits (132), Expect = 1e-08
Identities = 23/42 (54%), Positives = 33/42 (77%)
Frame = -2
Query: 318 EFSDTVGTSRDYLAKLLFWCMLLGHHLRGLENRLQLSCVVGL 359
+F + +RDYLA+LLFWCMLLGH+L+GLE R+ L+ ++ L
Sbjct: 507 QFHPVISLTRDYLARLLFWCMLLGHYLKGLEYRVDLTELLSL 382
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 117 FSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIAS 159
F +++++ L RLL ++ G+ L EYR+ LT L + S
Sbjct: 504 FHPVISLTRDYLARLLFWCMLLGHYLKGLEYRVDLTELLSLTS 376
>AV422148
Length = 460
Score = 50.4 bits (119), Expect = 4e-07
Identities = 46/178 (25%), Positives = 81/178 (44%), Gaps = 1/178 (0%)
Frame = +1
Query: 113 PSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLD-IASPCGARDSDCEKR 171
P F+VT+T L +L+ S ++TGY NA+YR+ L L+ +A P D + +
Sbjct: 1 PPQFFAVTITTVAENLAQLMYSVMMTGYMFKNAQYRLELQEGLEQVALP------DVQDK 162
Query: 172 SEILEVKGGGEDGGEIEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKE 231
+ + G + EV + S R+ A YI+ L+ E+ E
Sbjct: 163 KDKPDYAPGTQKNVSGEVLR------WNHVSGPERI------DAKKYIELLEVEI----E 294
Query: 232 ELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNILS 289
ELN + +N LLEYL+SL+P + +L+ + +V ++ ++ +L+
Sbjct: 295 ELNRQVGRQ-----SSNAQNELLEYLKSLEPRNLKDLTSSAGEDVVLAMNTFIKRLLA 453
>TC16172 similar to UP|Q97HY8 (Q97HY8) Uncharacterized secreted protein,
homolog YXKC Bacillus subtilis, partial (6%)
Length = 591
Score = 33.5 bits (75), Expect = 0.057
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 325 TSRDYLAKLLFWCMLLGHHLRGLENRLQLSCVVG 358
TS L+KLL+W M++G+ +R +E R + V+G
Sbjct: 45 TSATELSKLLYWLMVVGYSIRNIEVRYDMERVLG 146
>AV768270
Length = 502
Score = 32.3 bits (72), Expect = 0.13
Identities = 13/42 (30%), Positives = 25/42 (58%)
Frame = -2
Query: 102 KQTISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLW 143
K+T +L +LPSDH+ + +T++ LH + + + + LW
Sbjct: 288 KETKQLVLPVLPSDHYGLLLTITSK*LHSIQI*LVYPFFILW 163
>CB827058
Length = 555
Score = 32.0 bits (71), Expect = 0.17
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +1
Query: 15 TDLSPNPLHPP--------KPPPLFLRRRRCFLTSCYADGFSSSSSSSS 55
T +P P PP PPPL R + +TS Y SSSSSSSS
Sbjct: 88 TKRAPTPTRPPLLPSGNVAPPPPLSRRVKSREVTSRYMSSSSSSSSSSS 234
>TC18261 similar to UP|WSC2_YEAST (P53832) Cell wall integrity and stress
response component 2 precursor, partial (5%)
Length = 538
Score = 31.6 bits (70), Expect = 0.22
Identities = 22/67 (32%), Positives = 30/67 (43%), Gaps = 8/67 (11%)
Frame = +3
Query: 7 RPFILSRLTDLSPNPLH--------PPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDD 58
R F R + PNPL+ PP+PPPL +TS + SS +S SS+
Sbjct: 132 RSFANKRSANSKPNPLNAAQSPPTSPPQPPPLQPPTSLSLMTSTTSTSSSSPNSRSSAAS 311
Query: 59 VVSTRKS 65
S+ S
Sbjct: 312 ASSSSPS 332
>TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%)
Length = 1036
Score = 25.0 bits (53), Expect(2) = 0.36
Identities = 11/19 (57%), Positives = 13/19 (67%), Gaps = 1/19 (5%)
Frame = +2
Query: 26 KPPPLFLR-RRRCFLTSCY 43
+P PL R RRRCF T C+
Sbjct: 149 RPQPLHRRTRRRCFCTFCF 205
Score = 24.3 bits (51), Expect(2) = 0.36
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 44 ADGFSSSSSSSSSDDVVSTRKST 66
A G SSSSSSSSS V ST
Sbjct: 201 ASG*SSSSSSSSSSSAVLASPST 269
>TC12355 similar to UP|PR18_HUMAN (Q99633) Pre-mRNA splicing factor 18
(PRP18 homolog) (hPRP18), partial (8%)
Length = 563
Score = 30.0 bits (66), Expect = 0.63
Identities = 21/62 (33%), Positives = 30/62 (47%)
Frame = +1
Query: 5 SWRPFILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDVVSTRK 64
+W+P L + P P PP PP R TS + SS++S+SSS S+ K
Sbjct: 199 NWKP----NL*NAPPPPPPPPPTPPPHPPTSRTSTTSSSLNKKSSAASASSSSPSPSSAK 366
Query: 65 ST 66
+T
Sbjct: 367 TT 372
>TC18555 similar to GB|AAP68307.1|31711902|BT008868 At2g33570 {Arabidopsis
thaliana;}, partial (19%)
Length = 759
Score = 29.3 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Frame = +2
Query: 16 DLSPNPLHPPKPPP-------LFLRRRRCFLTSCYADGFSSSSSSSSS 56
+L P+P PP PPP LF RR SC + + + SS+ S
Sbjct: 242 NLFPSPKKPPPPPPPQPHRLLLFFHRRHHHHRSCTSKWWKAVSSNEPS 385
>TC15376 weakly similar to UP|Q7SYH2 (Q7SYH2) Cystatin domain fetuin-like
protein, partial (6%)
Length = 582
Score = 29.3 bits (64), Expect = 1.1
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +3
Query: 10 ILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDV 59
ILS L D S P PP PPPL T + S SSSS+ DDV
Sbjct: 339 ILSILADDSVTPAPPPPPPPLSPPSP----TPSPSPSPSPSSSSTLKDDV 476
>TC9027 weakly similar to UP|AAQ82447 (AAQ82447) SufB, partial (51%)
Length = 1016
Score = 28.9 bits (63), Expect = 1.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 15 TDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSS 56
++ +P PL PP PPP + R T+ +S S+S+ S
Sbjct: 179 SESAPTPLPPPHPPPPTTKSARSSATATTTRNSASPSTSTPS 304
>TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protein, partial
(25%)
Length = 1077
Score = 28.5 bits (62), Expect = 1.8
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = +1
Query: 17 LSPNPLHPPKPPPLF 31
L P+P PP PPPLF
Sbjct: 535 LLPDPFQPPSPPPLF 579
Score = 28.1 bits (61), Expect = 2.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 17 LSPNPLHPPKPPPL 30
L PNP PP PPPL
Sbjct: 574 LFPNPFQPPSPPPL 615
>BP038802
Length = 533
Score = 25.4 bits (54), Expect(2) = 2.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 17 LSPNPLHPPKPPP 29
L+P PL PP PPP
Sbjct: 215 LTPPPLFPPPPPP 253
Score = 21.2 bits (43), Expect(2) = 2.2
Identities = 12/29 (41%), Positives = 14/29 (47%)
Frame = +1
Query: 45 DGFSSSSSSSSSDDVVSTRKSTFDRGFTV 73
D + SSS+S DD FD FTV
Sbjct: 265 DNTTDSSSTSDDDDDGGDDGPFFDLEFTV 351
>TC9953 similar to GB|CAD35362.1|21535744|ATH490171 FK506 binding protein
1 {Arabidopsis thaliana;} , partial (29%)
Length = 481
Score = 28.1 bits (61), Expect = 2.4
Identities = 15/28 (53%), Positives = 16/28 (56%), Gaps = 1/28 (3%)
Frame = +2
Query: 14 LTDLSP-NPLHPPKPPPLFLRRRRCFLT 40
LT L P N PPKPPPL L +C T
Sbjct: 56 LTSLHPLNNSSPPKPPPLTLTPIKCAAT 139
>TC9149 similar to UP|Q8LSK7 (Q8LSK7) Auxin-regulated protein, partial
(35%)
Length = 602
Score = 27.7 bits (60), Expect = 3.1
Identities = 17/44 (38%), Positives = 20/44 (44%)
Frame = -1
Query: 12 SRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSS 55
S L +S PL PP PPP+ + A G S SS SS
Sbjct: 275 STLASVSEKPLFPPLPPPI-------LIPDSPAPGIPSRSSVSS 165
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 27.7 bits (60), Expect = 3.1
Identities = 29/81 (35%), Positives = 37/81 (44%), Gaps = 4/81 (4%)
Frame = -1
Query: 4 LSWRPFILSRLTDLSPNPLHPPK----PPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDV 59
L+ P R D + PLHPP PPP + +S ++ SSSSSSSSS
Sbjct: 423 LARAPHATFREWDAAFAPLHPPHLLPLPPPPGSASQPA*ASS-FSLPLSSSSSSSSSSSS 247
Query: 60 VSTRKSTFDRGFTVIANMLRR 80
S+R S T + LRR
Sbjct: 246 SSSR*SML--YLTFLGRRLRR 190
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,555,695
Number of Sequences: 28460
Number of extensions: 107800
Number of successful extensions: 1596
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of query: 360
length of database: 4,897,600
effective HSP length: 91
effective length of query: 269
effective length of database: 2,307,740
effective search space: 620782060
effective search space used: 620782060
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0081b.1