TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0079b.1
         (1571 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AV779281                                                              234  8e-62
AV777202                                                              217  1e-56
BI418295                                                              209  2e-54
BP041457                                                              119  4e-27
BP033820                                                              117  1e-26
AV769206                                                               97  3e-20
BP063694                                                               96  4e-20
AV764934                                                               94  2e-19
BP073434                                                               90  3e-18
BP030995                                                               88  9e-18
BP066067                                                               87  2e-17
AU088980                                                               80  2e-15
BP070393                                                               73  4e-13
TC12255                                                                72  9e-13
AV766088                                                               71  1e-12
BP033602                                                               59  5e-09
BP030371                                                               57  2e-08
TC11719                                                                49  8e-06
AV427921                                                               45  9e-05
TC16032 similar to BAC87886 (BAC87886) PGL-3, partial (4%)             42  6e-04

>AV779281 
          Length = 505

 Score =  234 bits (597), Expect = 8e-62
 Identities = 119/156 (76%), Positives = 132/156 (84%)
 Frame = +1

Query: 15  PISVAIPQLSSTSLVHKLLLKLDDSNFLSWKQHVEGIVRTHRLQSFLLHQPEIPPRFLSD 74
           PI +  P LSS++LVH   L  +D+NFLSWKQHVEGIVRTHR QSFL H P++PPRFLSD
Sbjct: 46  PIPMVQPSLSSSALVHNAYL--EDTNFLSWKQHVEGIVRTHRWQSFLDH-PDVPPRFLSD 216

Query: 75  EDRANSVENPAFLVWEQHDSALFTWLLSSLSPSVLPTVVNCQHSWQIWEAVLDFFHAHSL 134
           EDR N+VENPA+ +WEQ DSALFTWLLSSLSP+VLPTVVNC  SWQ+ EAVLDFF AHS 
Sbjct: 217 EDRVNAVENPAYQLWEQQDSALFTWLLSSLSPTVLPTVVNCSQSWQVREAVLDFFKAHSF 396

Query: 135 AQSTQLRSELRSITKGSKNTSDYLKRIKSIVNALIS 170
           AQSTQLRSELRSI KGSK  SDYLKRIKSIVNA I+
Sbjct: 397 AQSTQLRSELRSIAKGSKTCSDYLKRIKSIVNASIT 504


>AV777202 
          Length = 421

 Score =  217 bits (553), Expect = 1e-56
 Identities = 105/138 (76%), Positives = 119/138 (86%)
 Frame = +3

Query: 1   MAEEASPTQIPTPTPISVAIPQLSSTSLVHKLLLKLDDSNFLSWKQHVEGIVRTHRLQSF 60
           MA+E    +   P P++V  PQL+S+SLVHKL+LKLDDSNFLSWKQHVEGIVRTHRLQ+F
Sbjct: 9   MADEGHAQETAVPVPVAVLQPQLASSSLVHKLVLKLDDSNFLSWKQHVEGIVRTHRLQNF 188

Query: 61  LLHQPEIPPRFLSDEDRANSVENPAFLVWEQHDSALFTWLLSSLSPSVLPTVVNCQHSWQ 120
           L+H P+IPPRFLS+EDR N+VENPA+ VW+Q DSALFTWLLSSLS SVLPTVVNC  SWQ
Sbjct: 189 LVH-PDIPPRFLSEEDRVNAVENPAYQVWDQQDSALFTWLLSSLSSSVLPTVVNCTQSWQ 365

Query: 121 IWEAVLDFFHAHSLAQST 138
           IWEAVLDFF A SLAQST
Sbjct: 366 IWEAVLDFFQAQSLAQST 419


>BI418295 
          Length = 523

 Score =  209 bits (533), Expect = 2e-54
 Identities = 98/173 (56%), Positives = 134/173 (76%)
 Frame = +2

Query: 42  LSWKQHVEGIVRTHRLQSFLLHQPEIPPRFLSDEDRANSVENPAFLVWEQHDSALFTWLL 101
           + W+Q VEG +++H+L  FL+  PEIP RFL++EDR  + ENPA+  W + DS +FTWLL
Sbjct: 8   VGWRQQVEGAIQSHQLHDFLV-DPEIPQRFLTEEDRVAATENPAYTTWIKQDSMVFTWLL 184

Query: 102 SSLSPSVLPTVVNCQHSWQIWEAVLDFFHAHSLAQSTQLRSELRSITKGSKNTSDYLKRI 161
           ++LSP VLPTV+NC+ S Q+W  +LDFF     AQS +LRSEL++ITKGSK+ ++YL+RI
Sbjct: 185 TTLSPFVLPTVINCERSSQVWREILDFFENQCRAQSAKLRSELKNITKGSKSITEYLRRI 364

Query: 162 KSIVNALISIGDPVTYREHLEAIFDGLREDYSHLMTIVTSREFPCSISQAEAM 214
           K+IVN L+SIG+PV++R+HLEAIFDGL EDYS L TI+ +     +IS+ EAM
Sbjct: 365 KTIVNTLVSIGEPVSFRDHLEAIFDGLPEDYSALSTIIFTHASSSTISEVEAM 523


>BP041457 
          Length = 495

 Score =  119 bits (298), Expect = 4e-27
 Identities = 58/136 (42%), Positives = 83/136 (60%)
 Frame = +2

Query: 23  LSSTSLVHKLLLKLDDSNFLSWKQHVEGIVRTHRLQSFLLHQPEIPPRFLSDEDRANSVE 82
           L S    + +  KL    FL WKQ VE I++ H L  +++ +P IPPR+ SDE+ AN V 
Sbjct: 86  LRSALFSYLIFEKLSAKKFLLWKQQVEPIIKAHHLHCYIV-EPAIPPRYSSDEEHANGVV 262

Query: 83  NPAFLVWEQHDSALFTWLLSSLSPSVLPTVVNCQHSWQIWEAVLDFFHAHSLAQSTQLRS 142
           NPA+ +WE HD  L +WL S LS SV   ++ C +S+Q+W  +  FFH  + A+STQ+R+
Sbjct: 263 NPAYPIWETHDQFLLSWLQSLLSSSVHTCMIGCVNSFQLWVKIHSFFHNQTRAKSTQIRT 442

Query: 143 ELRSITKGSKNTSDYL 158
           ELRS   G +    Y+
Sbjct: 443 ELRSAKLGGRLLHGYI 490


>BP033820 
          Length = 537

 Score =  117 bits (293), Expect = 1e-26
 Identities = 68/160 (42%), Positives = 93/160 (57%), Gaps = 24/160 (15%)
 Frame = -2

Query: 514 ASFSSPIHTQTTLLLKNLLLVPNITKNLVSVSKFAQDNGVYFEFHPFHCTVNSQDTCKTL 573
           A+  S  + +  L+L  LLLVP+ITKNLVSVS+FA+DN VYF FH   C V  QDT + L
Sbjct: 536 ATLPSLFNPKAILILNKLLLVPSITKNLVSVSRFAKDNNVYFTFHANFCAVRHQDTSELL 357

Query: 574 LRGSLGSDGLYSFDG----------MHSSNFHKDLPQVPVSSAFSLSKPA---------- 613
           L GS+G DGLY FDG          + +S F   L   P++ A   S+P           
Sbjct: 356 LTGSVGDDGLYYFDGPPSQAVSHSPVKASLFQSSLHSQPLAQAGLASQPVGNKASSAIDL 177

Query: 614 -SPAVNTIVSTS---NNVPSPTAYDLWHSRLGHPHYETLQ 649
            S  VN+ VS+S   N+  + + Y+LWH+R+GHPH++ L+
Sbjct: 176 PSSLVNSSVSSSAPCNSSSNISIYELWHNRMGHPHHDVLK 57


>AV769206 
          Length = 536

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
 Frame = -3

Query: 868 LRPYNSSKLSFRSQECVFLGYSSSHKGYKCLASDGRIYISKDVQFNEFKFPYSTLFSSEF 927
           LRPYNS+KLS  S+ECVF+GYS +HKGYKCL   GRIYISKDV F+E +FPY +LF  E 
Sbjct: 531 LRPYNSTKLSLHSKECVFIGYSINHKGYKCLDQSGRIYISKDVLFHEHRFPYPSLFPDET 352

Query: 928 PASNPSSV--SSVIPVISY 944
            +S  +     S IP++S+
Sbjct: 351 TSSTSAEFFPLSTIPIVSH 295


>BP063694 
          Length = 511

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
 Frame = -2

Query: 620 IVSTSNNVPSPTAYDLWHSRLGHPHYETLQSALTTCKISVPH-KSKYTICHSCCVAKSHR 678
           +++TS+ +P   +++LWHSRLGH +++ ++       + V     K   C SC +AKS R
Sbjct: 402 LLTTSSPLPR-ASFELWHSRLGHVNFDIIKQLHKHGCLDVSSILPKPICCTSCQMAKSKR 226

Query: 679 LPSSASSTLYTAPLELIFADLWGPASIESSAGYSYFLTCVDAFSRFTWIYLLKRKSETST 738
           L    ++   +A L+LI  DL GP+ + S  G+SYF+  VD FSRFTW Y LKRKS+ S 
Sbjct: 225 LVFHDNNKRASAVLDLIHCDLRGPSPVASIDGFSYFVIFVDDFSRFTWFYPLKRKSDFSD 46

Query: 739 VFIQFQAMVELKFGL 753
           V ++F+  +E +F +
Sbjct: 45  VLLRFKVFMENRFSV 1


>AV764934 
          Length = 406

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 52/139 (37%), Positives = 74/139 (52%), Gaps = 2/139 (1%)
 Frame = -2

Query: 569 TCKTLLRGSLGSDGLYSFD--GMHSSNFHKDLPQVPVSSAFSLSKPASPAVNTIVSTSNN 626
           T + L+ G +G DGLYSF    +    + + +   PVS       P+S +    +ST   
Sbjct: 372 TSEPLIHGVVGPDGLYSFPLPQLQQLGYTRSMSSSPVSGRH----PSSVSAFVTLST--- 214

Query: 627 VPSPTAYDLWHSRLGHPHYETLQSALTTCKISVPHKSKYTICHSCCVAKSHRLPSSASST 686
                    WHSRLGHPH + L+  L++C +S   K       +CC+ K+HRLPS  S+T
Sbjct: 213 ---------WHSRLGHPHLDNLKRVLSSCNVSYSPKDTVEFRTACCLGKAHRLPSQMSTT 61

Query: 687 LYTAPLELIFADLWGPASI 705
            Y  P ELI++DLWGPA +
Sbjct: 60  TY-LPFELIYSDLWGPAPV 7


>BP073434 
          Length = 490

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 48/117 (41%), Positives = 70/117 (59%)
 Frame = -1

Query: 573 LLRGSLGSDGLYSFDGMHSSNFHKDLPQVPVSSAFSLSKPASPAVNTIVSTSNNVPSPTA 632
           LL G +G+DGLYSF G+ +S     L  V  S +F +       VNTI +T+ N      
Sbjct: 310 LLLGHVGADGLYSFPGLLAS-----LSSVDRSPSFDI-------VNTITTTTTN-----K 182

Query: 633 YDLWHSRLGHPHYETLQSALTTCKISVPHKSKYTICHSCCVAKSHRLPSSASSTLYT 689
           + +WHSRLGHPH + LQ+ L +C I +  +     C++CC+ KSH LPSS S+++Y+
Sbjct: 181 FLIWHSRLGHPHQDALQAVLQSCNIHLSSRDMTDFCYACCLGKSHILPSSLSTSVYS 11



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = -2

Query: 462 APSTLGNWHPDSGATHHVTHDASAISDGMSVTGNDQVYMGNGQGLPIQSIG 512
           A   + +W+PDSGA+HHVT   + I       G D +++GNGQGL + S G
Sbjct: 477 AAGLVASWYPDSGASHHVTPHGNNIQYPDPFEGPDHIFVGNGQGLSVASSG 325


>BP030995 
          Length = 458

 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 54/132 (40%), Positives = 74/132 (55%), Gaps = 1/132 (0%)
 Frame = -3

Query: 522 TQTTLLLKNLLLVPNITKNLVSVSKFAQDNGVYFEFHPFHCTVNSQDTCKTLLRGSLGSD 581
           T   L+L NLL VP + KNL SVS F + N V+FEFH   C V SQ+T +TLL+G+L  +
Sbjct: 438 TSFPLVLNNLLHVPGVCKNLSSVSXFCKQNNVFFEFHSDSCLVKSQETEETLLQGTL-RN 262

Query: 582 GLYSFDG-MHSSNFHKDLPQVPVSSAFSLSKPASPAVNTIVSTSNNVPSPTAYDLWHSRL 640
           GL +FD  +H  N H     +  S+  S S PAS    ++ S++    +     LWHSRL
Sbjct: 261 GLCAFDNLLHKVNLH-SASTLSNSALLSSSSPASALSVSVFSSNKCAQADIDSRLWHSRL 85

Query: 641 GHPHYETLQSAL 652
           GH   + +   L
Sbjct: 84  GHASQKIVSHVL 49


>BP066067 
          Length = 505

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 45/108 (41%), Positives = 67/108 (61%), Gaps = 9/108 (8%)
 Frame = -2

Query: 444 PPRAPARHIRAPQTMLA---------SAPSTLGNWHPDSGATHHVTHDASAISDGMSVTG 494
           P +   +H++ PQ+  A         +AP T  +W  DSGA+HHVT+D   + + +++ G
Sbjct: 399 PQKLSQQHLQLPQSSPAPMAFVSNTVAAP*TTHSW*ADSGASHHVTNDPQHLMESITMPG 220

Query: 495 NDQVYMGNGQGLPIQSIGSASFSSPIHTQTTLLLKNLLLVPNITKNLV 542
            +QVY+ +GQGLPI SIG  SFSSP+ + T   LK+   +P ITKN+V
Sbjct: 219 QEQVYVCSGQGLPILSIGFTSFSSPLISNTKFSLKDFFHLPTITKNIV 76


>AU088980 
          Length = 360

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 41/105 (39%), Positives = 58/105 (55%)
 Frame = +2

Query: 791 NGSVERKHRHIVETGLSLLACANMPTSYWDHAFLTATFLINRLPTPVLGNLSPYHKLFKV 850
           N  VERKHRHI+    +L+  + +P + W  A   A +LIN LP+P+L    PY  L   
Sbjct: 2   NSIVERKHRHILNVTRALMFHSYLPKNLWTFAVKHAAYLINXLPSPLLKGQCPYQFLNND 181

Query: 851 PADYKILRVFGSACYPHLRPYNSSKLSFRSQECVFLGYSSSHKGY 895
                 L+VFG+ CY     +N  KL  R+++CVFLG+ +   GY
Sbjct: 182 SPTLLDLKVFGTLCYSSTLTHNXQKLDPRARKCVFLGFKTGTXGY 316


>BP070393 
          Length = 359

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
 Frame = -3

Query: 566 SQDTCKTLLRGSLGSDGLYSFDGMHSSNFHKDLPQVPVS----SAFSLSKPASPAVNTIV 621
           +++T K LLRGS+GSDGLY+FD +++++      +  +S    S  S   P +     + 
Sbjct: 294 AKETSKVLLRGSVGSDGLYTFDDVNAASVSSSCSKSDLSTSTPSVLSTVYPGTGKSQNMS 115

Query: 622 STSNNVPSPTAYDLWHSRLGHPHYETLQSALTTCKISVPH 661
           S S+   S  +YDLWH RLGHPH+E L++ L  C + +P+
Sbjct: 114 SVSSLGNS--SYDLWHCRLGHPHHEVLKTTLQLCNVPLPN 1



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 13/23 (56%), Positives = 15/23 (64%)
 Frame = -2

Query: 483 ASAISDGMSVTGNDQVYMGNGQG 505
           A   SD  S TG +Q+ MGNGQG
Sbjct: 355 AGNFSDTSSFTGTEQILMGNGQG 287


>TC12255 
          Length = 558

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 44/126 (34%), Positives = 67/126 (52%), Gaps = 25/126 (19%)
 Frame = +1

Query: 568 DTCKTLLRGSLGSDGLYSFDG----------MHSSNFHKDLPQVPVSSAFSLSKPA---- 613
           DT + LL GS+G DGLY FDG          + +S F   L   P++ A   S+P     
Sbjct: 181 DTSELLLTGSVGDDGLYYFDGPPSQAVSHSPVKASLFQSSLHSQPLAQAGLASQPVGNKA 360

Query: 614 -------SPAVNTIVSTS---NNVPSPTAYDLWHSRLGHPHYETLQSALTTCKISV-PHK 662
                  S  VN+ VS+S   N+  + + Y+LWH+R+GHPH++ L+  L+ C + V  +K
Sbjct: 361 SSAIDLPSSLVNSSVSSSAPCNSSSNISIYELWHNRMGHPHHDVLKQTLSLCNVPVSSNK 540

Query: 663 SKYTIC 668
           S ++ C
Sbjct: 541 SVFSFC 558



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 31/59 (52%), Positives = 38/59 (63%)
 Frame = +3

Query: 454 APQTMLASAPSTLGNWHPDSGATHHVTHDASAISDGMSVTGNDQVYMGNGQGLPIQSIG 512
           A  T   +AP    NW PDSGATHHVT++     D + +   DQ+ +GNGQGLPIQSIG
Sbjct: 12  ASSTQFTAAPQV--NWCPDSGATHHVTNNPGIFVDNVPLATQDQLLVGNGQGLPIQSIG 182


>AV766088 
          Length = 501

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 36/104 (34%), Positives = 57/104 (54%)
 Frame = -3

Query: 632 AYDLWHSRLGHPHYETLQSALTTCKISVPHKSKYTICHSCCVAKSHRLPSSASSTLYTAP 691
           A  LWHSRLGHP    L+   +   IS    +   +C SC   K  RLP  +S+ +   P
Sbjct: 316 AQSLWHSRLGHPSSSALRYLRSNKFISYELLNYSPVCESCVFGKHVRLPFVSSNNVTVMP 137

Query: 692 LELIFADLWGPASIESSAGYSYFLTCVDAFSRFTWIYLLKRKSE 735
            +++ +DLW  + + SSAG+ +++  +D F+ F W + L  KS+
Sbjct: 136 FDILHSDLW-TSPVLSSAGHRFYVLFLDDFTDFLWTFPLSNKSQ 8


>BP033602 
          Length = 533

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 30/85 (35%), Positives = 47/85 (55%)
 Frame = +3

Query: 635 LWHSRLGHPHYETLQSALTTCKISVPHKSKYTICHSCCVAKSHRLPSSASSTLYTAPLEL 694
           LWH+RLGHP+++ L+        +V   S    C SC +AK+ R P  +     + P  L
Sbjct: 276 LWHNRLGHPNFQYLRHLFPDLFKNVNCSSLE--CESCVLAKNQRAPYYSQPYHASRPFYL 449

Query: 695 IFADLWGPASIESSAGYSYFLTCVD 719
           I +D+WGP+ I +  G  +F+T +D
Sbjct: 450 IHSDVWGPSKITTQFGKRWFVTFID 524


>BP030371 
          Length = 516

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 62/218 (28%), Positives = 89/218 (40%), Gaps = 3/218 (1%)
 Frame = -2

Query: 152 KNTSDYLKRIKSIVNALISIGDPVTYREHLEAIFDGLREDYSHLMTIV-TSREFPC-SIS 209
           +  ++YL  IKSI +   SIGDPV+ +E  E I +G    Y  L+ ++  S +F   S+ 
Sbjct: 515 RTVAEYLM*IKSITDPPRSIGDPVSAKEQAEIILEGFPTKYESLVNLIHMSDKFQALSLD 336

Query: 210 QAEAMVIAHEARLDRLRLRQHAASSPSAFLAQATAPPQSTPQAPPLVPSQSPAPPQAPPP 269
           + E+++   EAR++  R           FL +       T +        S A   AP P
Sbjct: 335 EIESLLRDQEARIECYR----------KFLTEI*VNLT*TLEN----QGSSSANTYAPAP 198

Query: 270 VAIAPPSSEVNYISRTGSDDRAYEDRDDDRSRSDDNRDRGGYNNRGRGGRGSYNNRGRGG 329
           V  A  S +                                +N +  GG+G     GRG 
Sbjct: 197 VHSAEASHD----------------------------GYSNFNGKRCGGKG----*GRG- 117

Query: 330 DRSSVQCQICHKYGHDASVCYYRGNST-SPATNSQPNM 366
               VQCQ+C   GH ASVCY+R + T    TN  P M
Sbjct: 116 --YGVQCQVCLPTGHTASVCYHRFDKTFYLCTNPYPTM 9


>TC11719 
          Length = 376

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
 Frame = +3

Query: 567 QDTCKTLLRGSLGSDGLYSFDGM-HSSNFHKDLPQVPVSSAFSLSKPASPAVNTIVSTSN 625
           Q+T +TLL+G+L  +GL +FD + H  N H     +  S+  S S PAS    ++ S++ 
Sbjct: 72  QETEETLLQGTL-RNGLCAFDNLLHKVNLHS-ASTLSNSALLSSSSPASALSVSVFSSNK 245

Query: 626 NVPSPTAYDLWHSRLGHPHYETLQSALTTCKISVPHKSKYTIC 668
              +     LWHSRLGH   + +   L  C  S+       +C
Sbjct: 246 CAQADIDSRLWHSRLGHASQKIVSHVLKQCNPSLSLNKISVVC 374


>AV427921 
          Length = 284

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 23/61 (37%), Positives = 35/61 (56%)
 Frame = +1

Query: 783 TCPHTHHQNGSVERKHRHIVETGLSLLACANMPTSYWDHAFLTATFLINRLPTPVLGNLS 842
           T  +T  QNG  ERK+R I+    SLL  + +P S+   A + +  ++NR PT V+ N+ 
Sbjct: 10  TAAYTPQQNGVSERKNRTILNMVRSLLTMSGLPKSFLPEAVMWSLHILNRSPTLVVQNMM 189

Query: 843 P 843
           P
Sbjct: 190 P 192


>TC16032 similar to BAC87886 (BAC87886) PGL-3, partial (4%)
          Length = 631

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 24/49 (48%), Positives = 28/49 (56%), Gaps = 6/49 (12%)
 Frame = +3

Query: 308 RGGYNNRGRGGRGSYNNRGRGGDRSS------VQCQICHKYGHDASVCY 350
           R  YNNRGRGGRGSY N G GG  ++      VQ  +C  +    SVCY
Sbjct: 336 RNNYNNRGRGGRGSYGNNGSGGFVNNVAGDVGVQS*LCGVH----SVCY 470


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.331    0.142    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,328,395
Number of Sequences: 28460
Number of extensions: 610078
Number of successful extensions: 10555
Number of sequences better than 10.0: 451
Number of HSP's better than 10.0 without gapping: 6768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9104
length of query: 1571
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1469
effective length of database: 1,994,680
effective search space: 2930184920
effective search space used: 2930184920
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 62 (28.5 bits)