BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0078.10
(592 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP051839 320 1e-99
AI967524 167 6e-42
BP043024 160 4e-40
AV407690 134 5e-32
BF177767 125 2e-29
AV422410 120 5e-28
CB829398 116 1e-26
TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin l... 115 2e-26
BI419208 95 4e-20
TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 80 7e-16
TC19404 similar to GB|AAM70566.1|21700885|AY124857 At2g39750/T5I... 79 2e-15
TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%) 78 5e-15
TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 77 6e-15
AV429242 76 2e-14
TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partia... 73 1e-13
TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%) 71 4e-13
AV428170 70 1e-12
BI420376 70 1e-12
AV406972 65 3e-11
BP042300 57 6e-09
>BP051839
Length = 551
Score = 320 bits (820), Expect(2) = 1e-99
Identities = 150/152 (98%), Positives = 151/152 (98%)
Frame = +1
Query: 428 VWYVGLKACITQLPSDGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWNE 487
+ YVGLKACITQLPSDGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWNE
Sbjct: 94 IMYVGLKACITQLPSDGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWNE 273
Query: 488 IIDSYVRAYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGFNTLPVLYDR 547
IIDSYVRAYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGFNTLPVLYDR
Sbjct: 274 IIDSYVRAYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGFNTLPVLYDR 453
Query: 548 GLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 579
GLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVE
Sbjct: 454 GLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 549
Score = 60.8 bits (146), Expect(2) = 1e-99
Identities = 26/31 (83%), Positives = 27/31 (86%)
Frame = +2
Query: 391 KEGYIAIWRKPLNNSCYLSRDIPVHPPLCES 421
+ G AIWRKPLNNSCYLSRDIPVHPPLC S
Sbjct: 14 ERGLHAIWRKPLNNSCYLSRDIPVHPPLCMS 106
>AI967524
Length = 460
Score = 167 bits (422), Expect = 6e-42
Identities = 76/140 (54%), Positives = 99/140 (70%)
Frame = +2
Query: 142 DYVPCLDNAEAVARLNGSERGEKYERHCPEEGKGLNCLLPRPLGYRVPILWPQSRDEVWF 201
D++PCLDN +A+ L ++ E ER CPEE CL+ P GY+ PI WP+SR+++W+
Sbjct: 44 DFIPCLDNLKAIKHLPITKHYEHRERQCPEEPP--TCLVSLPEGYKRPIEWPKSREKIWY 217
Query: 202 SNVPHTRLVEDKGGQNWISIKNDKFVFPGGGTQFIHGADKYLDQISAMVPDIAFGSNTRV 261
SNVPHT+L E KG QNW+ + FPGGGTQF HGA Y+D I+ VPDI++G TRV
Sbjct: 218 SNVPHTKLAEFKGHQNWVKATGEYLTFPGGGTQFKHGALHYIDTIAQSVPDISWGQQTRV 397
Query: 262 ALDIGCGVASFGAFLMQRNV 281
LD+GCGVASFG FL +R+V
Sbjct: 398 ILDVGCGVASFGGFLFERDV 457
>BP043024
Length = 447
Score = 160 bits (406), Expect = 4e-40
Identities = 77/137 (56%), Positives = 98/137 (71%)
Frame = -1
Query: 226 FVFPGGGTQFIHGADKYLDQISAMVPDIAFGSNTRVALDIGCGVASFGAFLMQRNVTTLS 285
F FPGGGTQF GADKY+DQ+++++P R ALD GCGVAS+GA+L RNV +S
Sbjct: 447 FRFPGGGTQFPQGADKYIDQLASVIP--MKNGTVRTALDTGCGVASWGAYLWSRNVVAMS 274
Query: 286 IAPKDVHENQIQFALERGVPALAAVFATHRLLFPSHAFDMIHCSRCRINWTRDDGILLLE 345
AP+D HE Q+QFALERGVPA+ V T +L +PS AFDM HCSRC I W +DGI ++E
Sbjct: 273 FAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMME 94
Query: 346 ANRLLRAGRYFVWAAQP 362
+R+LR G Y+V + P
Sbjct: 93 VDRVLRPGGYWVLSGPP 43
>AV407690
Length = 427
Score = 134 bits (336), Expect = 5e-32
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 9/141 (6%)
Frame = +3
Query: 262 ALDIGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPALAAVFATHRLLFPSH 321
ALD GCGVAS+GA+L++RNV +S APKD HE Q+QFALERGVPA+ V T L +PS
Sbjct: 3 ALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSR 182
Query: 322 AFDMIHCSRCRINWTRDDGILLLEANRLLRAGRYFVWAAQPV---------YKHEESLQE 372
AFDM CSRC I W ++G L+E +R+LR G Y++ + P+ + +E ++
Sbjct: 183 AFDMAQCSRCLIPWAANEGKYLMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKA 362
Query: 373 QWKEMENLTSRLCWELVRKEG 393
+ + +E L LCWE ++G
Sbjct: 363 EQRNIEELAESLCWEKKYEKG 425
>BF177767
Length = 494
Score = 125 bits (314), Expect = 2e-29
Identities = 61/119 (51%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Frame = +3
Query: 476 ELFRAESKYWNEIIDSYVRAYRWKEYN-LRNVMDMRAGFGGFAAALHDLQIDCWVMNVVP 534
E ++ ++ W + +++Y + R + RN+MDM AG G FAAA+ ++ WVMNVVP
Sbjct: 27 ETYQDDNTKWRKHVNAYKKINRLLDTGRYRNIMDMNAGLGSFAAAIESSKL--WVMNVVP 200
Query: 535 -VSGFNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
++ NTL V+Y+RGLIG+ HDWCE F TYPRTYDL+HA GLFS+ K +CNI I+LEM
Sbjct: 201 TIAEKNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHAHGLFSLYKSKCNIEDILLEM 377
>AV422410
Length = 440
Score = 120 bits (302), Expect = 5e-28
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
Frame = +2
Query: 430 YVGLKACITQLPS--DGYGVNVTT-WPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWN 486
Y LK C+++ S Y + V WP RL P R +K A ++++A+++ W
Sbjct: 2 YFKLKKCVSRTSSVKGEYSIGVIPKWPERLTAPQPRSTLLKNGA-----DVYQADTRRWL 166
Query: 487 EIIDSYVRAYRWK--EYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGFNTLPVL 544
+ Y + K ++RNVMDM A FGGFAAAL + WVMNVVP +TL V+
Sbjct: 167 RRVAYYKHSLNMKLGTSSVRNVMDMNAFFGGFAAAL--ISDPVWVMNVVPARKPSTLDVI 340
Query: 545 YDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFS 577
+DRGLIGV HDWCEPF TYPRTYDL+H + + S
Sbjct: 341 FDRGLIGVYHDWCEPFSTYPRTYDLIHVSSIES 439
>CB829398
Length = 366
Score = 116 bits (290), Expect = 1e-26
Identities = 56/121 (46%), Positives = 78/121 (64%)
Frame = +3
Query: 56 QPPLPPPPPPPRVKVFRLPPLPPVERMGLVDENGVMTDNFTVGDSDLGSVVDLLSWKNES 115
QPP PPPPP P PP PPVE+ G+V E+G M++ F VGD D V D + NE+
Sbjct: 30 QPPSPPPPPSPP------PPPPPVEKFGIVKEDGTMSEEFEVGDFDPEMVDDCV---NET 182
Query: 116 RGVVEEEGAAAKVVVEKFKVCDSGMVDYVPCLDNAEAVARLNGSERGEKYERHCPEEGKG 175
+ E AA K ++KF +C M +Y+PCLDN +A+ +L +E+GE++ERHCPE+G+
Sbjct: 183 QVEREGSSAAPKFAIKKFGLCPKTMSEYIPCLDNEDAIRKLPSTEKGERFERHCPEQGRE 362
Query: 176 L 176
L
Sbjct: 363 L 365
>TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin like
protein), partial (14%)
Length = 419
Score = 115 bits (288), Expect = 2e-26
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Frame = +2
Query: 416 PPLCESNDDPDDVWYVGLKACITQLPSD---GYGVNVTTWPSRLHQPPDRLQSIKQDAII 472
PPLC+S++DPD VW V ++ACIT G + WP+RL PP RL
Sbjct: 8 PPLCQSDEDPDAVWGVNMEACITPYSDHVNRAKGSGLAPWPARLTSPPPRLADFGYSN-- 181
Query: 473 SRVELFRAESKYWNEIIDSY--VRAYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVM 530
E+F +++ W ++ Y + + + LRN+MDM+A G FAAAL D D WVM
Sbjct: 182 ---EMFEKDTELWQRRVEKYWNLLSPKISSNTLRNIMDMKASMGSFAAALRDK--DVWVM 346
Query: 531 NVVPVSGFNTLPVLYDRGLIGVMH 554
NVVP G NTL ++YDRGLIG H
Sbjct: 347 NVVPQDGLNTLKLVYDRGLIGSTH 418
>BI419208
Length = 361
Score = 94.7 bits (234), Expect = 4e-20
Identities = 51/119 (42%), Positives = 70/119 (57%)
Frame = +3
Query: 271 SFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPALAAVFATHRLLFPSHAFDMIHCSR 330
SF A L+ + V TLS+ KD + Q ALERG P++ + F RL FPS+ FD +HC
Sbjct: 3 SFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSYVFDAVHCGG 182
Query: 331 CRINWTRDDGILLLEANRLLRAGRYFVWAAQPVYKHEESLQEQWKEMENLTSRLCWELV 389
C I W + G LLLE NR+LR G YF+ + KH+ QE+ M LT+ +CW ++
Sbjct: 183 CSIPWHSNGGKLLLEMNRILRPGGYFIMST----KHDSFEQEE--AMTMLTASICWNIL 341
>TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 749
Score = 80.5 bits (197), Expect = 7e-16
Identities = 34/54 (62%), Positives = 43/54 (78%)
Frame = +3
Query: 539 NTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
NTL V+++RGLIG+ HDWCE F TYPRTYDL+HA LFS+ + CN+ I+LEM
Sbjct: 12 NTLGVVFERGLIGIYHDWCEGFSTYPRTYDLIHANDLFSLYQGTCNLEDILLEM 173
>TC19404 similar to GB|AAM70566.1|21700885|AY124857 At2g39750/T5I7.5
{Arabidopsis thaliana;}, partial (12%)
Length = 520
Score = 79.3 bits (194), Expect = 2e-15
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 555 DWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
DWCEPFDTYPRTYDLLHAA L SVEKKRCN+S+IMLEM
Sbjct: 2 DWCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEM 115
>TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%)
Length = 452
Score = 77.8 bits (190), Expect = 5e-15
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Frame = +2
Query: 371 QEQWKEMENLTSRLCWELVRKEGYIAIWRKPLNNSCYLSRDIPVHPPLCESNDDPDDVWY 430
+ + ++++L + +C++L K+ IA+W+K +N+CY + +PP C+ + +PD WY
Sbjct: 26 RSDYNKLQDLLTSMCFKLYNKKDDIAVWQKAKDNNCYDKLSLESYPPKCDDSLEPDSGWY 205
Query: 431 VGLKACITQLPSDGYGVNVTT----WPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWN 486
L+ C +P+ Y + T WP RLH P+R+ ++ S F + W
Sbjct: 206 TPLRPCFV-VPNPKYKKSALTYMRKWPERLHSSPERITGVQG----SSSSTFSHDDSKWK 370
Query: 487 EIIDSYVRAY-RWKEYNLRNVMDM 509
+ I Y + +RNVMDM
Sbjct: 371 KRIPHYKKLLPDLGTSKIRNVMDM 442
>TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 664
Score = 77.4 bits (189), Expect = 6e-15
Identities = 32/54 (59%), Positives = 40/54 (73%)
Frame = +1
Query: 539 NTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
+TL +Y+RGLIG+ HDWCE TYPRTYDL+HA LFS+ RC + I+LEM
Sbjct: 7 STLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEM 168
>AV429242
Length = 138
Score = 75.9 bits (185), Expect = 2e-14
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 235 FIHGADKYLDQISAMVPDIAFGSNTRVALDIGCGVASFGAFLMQRN 280
FIHGAD+YLD I+ MVPDI FG + RVALD+GCGV SFGA+L+ RN
Sbjct: 1 FIHGADQYLDHIAKMVPDITFGQHIRVALDVGCGVTSFGAYLLSRN 138
>TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partial (79%)
Length = 584
Score = 73.2 bits (178), Expect = 1e-13
Identities = 30/54 (55%), Positives = 39/54 (71%)
Frame = +3
Query: 539 NTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
NTL V+Y+RGLIG +WCE TYPRTYD +H +F++ + RCNI I+LEM
Sbjct: 9 NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEM 170
>TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%)
Length = 709
Score = 71.2 bits (173), Expect = 4e-13
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3
Query: 544 LYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRCNISTIMLEM 592
+Y+RGL + HDWCE F TYPR+YDLLHA LFS K+RCNI ++ E+
Sbjct: 3 IYERGLFXIYHDWCESFSTYPRSYDLLHADSLFSKLKERCNIVAVIAEV 149
>AV428170
Length = 405
Score = 69.7 bits (169), Expect = 1e-12
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Frame = +3
Query: 396 AIWRKPLNNSCYLSRDIPVHPPLCESNDDPDDVWYVGLKACITQLP-----SDGYGVNVT 450
AIW+K N+ D + P+C++ ++PD WY ++ C++ LP + G +
Sbjct: 3 AIWQKAQNHL-----DCKANRPICQAENNPDKAWYTDMQTCLSPLPEVSSKEETAGGALE 167
Query: 451 TWPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWNEIIDSY--VRAYRWKEYNLRNVMD 508
WP R+ P R+ + S E F +++ W + + Y V K RN +D
Sbjct: 168 NWPDRVKATPPRIFMGVIKGVTS--ETFSEDNELWKKRVSYYKKVNNQLGKPGRYRNFLD 341
Query: 509 MRAGFGGFAAALHDLQIDCWVMN 531
M A GGFAAA ++ WVMN
Sbjct: 342 MNANLGGFAAAF--IKYPVWVMN 404
>BI420376
Length = 562
Score = 69.7 bits (169), Expect = 1e-12
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +1
Query: 136 CDSGMVDYVPCLDNAEAVARLNGSERGEKYERHCPEEGKGLNCLLPRPLGYRVPILWPQS 195
CD + ++ PC D ++ +R ERHCP L C +P P GYRVP WP+S
Sbjct: 331 CDVSLSEHTPCEDVQRSLRFPR--DRLIYRERHCPAPEDALRCRIPAPFGYRVPPRWPES 504
Query: 196 RDEVWFSNVPHTRLVEDK 213
RD W++NVPH L +K
Sbjct: 505 RDWAWYANVPHKELTVEK 558
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/63 (33%), Positives = 29/63 (45%), Gaps = 5/63 (7%)
Frame = +2
Query: 22 TALTLFSLTLLLFLFTRFSPTTNSPLTFFLPSEQQPPLPPPPP-----PPRVKVFRLPPL 76
T+L+L S TL SP+ ++P + S PPPPP PP +PP
Sbjct: 80 TSLSLGSTTLP-------SPSFSAPSSTSSASGNTQQTPPPPPSAATSPPSTAPTSIPPP 238
Query: 77 PPV 79
PP+
Sbjct: 239 PPL 247
>AV406972
Length = 168
Score = 65.1 bits (157), Expect = 3e-11
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 166 ERHCPEEGKGLNCLLPRPLGYRVPILWPQSRDEVWFSNVPHTRLVEDKGGQNWI 219
ERH P E + L+CL+P P GY P WP+SRD +++NVP+ L +K QNW+
Sbjct: 5 ERHPPPEKEKLHCLIPAPKGYTTPFPWPKSRDYAYYANVPYKHLTVEKAVQNWV 166
>BP042300
Length = 119
Score = 57.4 bits (137), Expect = 6e-09
Identities = 24/37 (64%), Positives = 29/37 (77%)
Frame = -3
Query: 329 SRCRINWTRDDGILLLEANRLLRAGRYFVWAAQPVYK 365
+RCR+ W D G+LLLE NRLLR G YFVW+A PVY+
Sbjct: 117 ARCRVPWHEDGGLLLLELNRLLRPGGYFVWSATPVYQ 7
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,555,736
Number of Sequences: 28460
Number of extensions: 234157
Number of successful extensions: 6936
Number of sequences better than 10.0: 453
Number of HSP's better than 10.0 without gapping: 3214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of query: 592
length of database: 4,897,600
effective HSP length: 95
effective length of query: 497
effective length of database: 2,193,900
effective search space: 1090368300
effective search space used: 1090368300
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0078.10