BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0076c.8
(415 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12704 UP|CAE45596 (CAE45596) S-receptor kinase-like protein 3,... 114 3e-26
AV422094 103 7e-23
TC12343 similar to UP|CDK9_SCHPO (Q96WV9) Serine/threonine prote... 101 3e-22
AV411237 100 8e-22
TC17497 UP|CAE45595 (CAE45595) S-receptor kinase-like protein 2,... 96 1e-20
BP032158 94 5e-20
TC11757 UP|Q91W27 (Q91W27) Tuberoinfundibular 39 residue protein... 92 2e-19
BP058703 91 4e-19
TC19726 similar to UP|Q9XIS3 (Q9XIS3) Lectin-like protein kinase... 90 6e-19
TC19002 weakly similar to UP|Q9XJ10 (Q9XJ10) ESTs C22458(C62866)... 86 1e-17
TC18848 weakly similar to UP|Q9SSQ6 (Q9SSQ6) F6D8.24 protein, pa... 86 1e-17
TC10873 similar to UP|Q9LDZ5 (Q9LDZ5) F2D10.13 (F5M15.3), partia... 85 2e-17
AI967588 81 4e-16
TC12526 similar to UP|Q39202 (Q39202) Receptor-like protein kina... 79 1e-15
TC12871 similar to UP|Q8H4R9 (Q8H4R9) OJ1457_D07.1 protein, part... 76 1e-14
TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete 74 6e-14
TC19526 homologue to UP|AAQ96340 (AAQ96340) Protein kinase-like ... 72 1e-13
TC9462 similar to UP|O49840 (O49840) Protein kinase (AT2G02800/T... 72 2e-13
TC16643 similar to UP|Q9FIH3 (Q9FIH3) Serine/threonine protein k... 72 2e-13
TC19546 similar to UP|Q40543 (Q40543) Protein-serine/threonine k... 71 4e-13
>TC12704 UP|CAE45596 (CAE45596) S-receptor kinase-like protein 3, complete
Length = 2481
Score = 114 bits (285), Expect = 3e-26
Identities = 55/98 (56%), Positives = 72/98 (73%)
Frame = +1
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F +ST+ T F ESNKLG+GGFG VYKGVLA+G+EIA+KRL + +F NEV +
Sbjct: 1417 FDFSTISSTTNHFSESNKLGEGGFGPVYKGVLANGQEIAVKRLSNTSGQGMEEFKNEVKL 1596
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDGFI 415
I+ ++H+NLV+LLGCS E LL+YEF+ N+SLD FI
Sbjct: 1597 IARLQHRNLVKLLGCSIHHDEMLLIYEFMHNRSLDYFI 1710
>AV422094
Length = 462
Score = 103 bits (256), Expect = 7e-23
Identities = 50/95 (52%), Positives = 64/95 (66%)
Frame = +2
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F YS L AT F+ NKLG+GGFG VYKG+L DG IA+K+L + + F E+
Sbjct: 14 FSYSELKNATNDFNIDNKLGEGGFGPVYKGILNDGTVIAVKQLSLGSHQGKSQFIAEIAT 193
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLD 412
IS+V+H+NLV+L GC G + LLVYE+L NKSLD
Sbjct: 194 ISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLD 298
>TC12343 similar to UP|CDK9_SCHPO (Q96WV9) Serine/threonine protein kinase
Cdk9 (Cyclin-dependent kinase Cdk9) , partial (7%)
Length = 723
Score = 101 bits (251), Expect = 3e-22
Identities = 48/95 (50%), Positives = 63/95 (65%)
Frame = +3
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F Y TL AT +FH NKLG+GGFG V+KG L DGREIA+K+L + F NE +
Sbjct: 207 FSYETLVAATKNFHAVNKLGEGGFGPVFKGKLNDGREIAVKKLSRRSNQGRTQFINEAKL 386
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLD 412
++ V+H+N+V L G G E LLVYE++P +SLD
Sbjct: 387 LTRVQHRNVVSLFGYCAHGSEKLLVYEYVPRESLD 491
>AV411237
Length = 427
Score = 99.8 bits (247), Expect = 8e-22
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +3
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F Y L +AT +F + +LG GGFGTVY G L DGRE+A+KRLY +N R F NEV I
Sbjct: 15 FSYEELKKATNNFDHTKELGDGGFGTVYYGKLLDGREVAVKRLYEHNFRRVEQFMNEVQI 194
Query: 378 ISSVEHKNLVRLLGC-SCSGPESLLVYEFLPN 408
++S+ HKNLV L GC S E LLVYE++ N
Sbjct: 195 LTSLRHKNLVSLYGCTSRHSRELLLVYEYISN 290
>TC17497 UP|CAE45595 (CAE45595) S-receptor kinase-like protein 2, complete
Length = 2946
Score = 95.5 bits (236), Expect = 1e-20
Identities = 55/160 (34%), Positives = 90/160 (55%), Gaps = 12/160 (7%)
Frame = +1
Query: 252 NKEAENGSSGGNVMVIVVAVVSSVVVTVVGVIIGAYVWKRRYIQ------------KKRR 299
NK++ N +V+++A V + +T++G+ I + +++ + K +R
Sbjct: 1432 NKKSINTKKLAGSLVVIIAFV--IFITILGLAISTCIQRKKNKRGDEGEIGIINHWKDKR 1605
Query: 300 GSYDPDKLAKTLQHNSLNFKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKR 359
G D D + F +ST+ AT F SNKLG+GGFG VYKG+LA+G+EIA+KR
Sbjct: 1606 GDEDIDL--------ATIFDFSTISSATNHFSLSNKLGEGGFGPVYKGLLANGQEIAVKR 1761
Query: 360 LYYNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPES 399
L + +F NE+ +I+ ++H+NLV+L GCS E+
Sbjct: 1762 LSNTSGQGMEEFKNEIKLIARLQHRNLVKLFGCSVHQDEN 1881
>BP032158
Length = 555
Score = 93.6 bits (231), Expect = 5e-20
Identities = 43/94 (45%), Positives = 64/94 (67%)
Frame = +2
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F + AT +F +NK+G+GGFG VYKGVL++G IA+K+L ++ +F NE+ +
Sbjct: 14 FSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSEGDVIAVKQLSSKSKQGNREFINEIGM 193
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
IS+++H NLV+L GC G + LLVYE++ N SL
Sbjct: 194 ISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSL 295
>TC11757 UP|Q91W27 (Q91W27) Tuberoinfundibular 39 residue protein, partial
(10%)
Length = 715
Score = 91.7 bits (226), Expect = 2e-19
Identities = 45/94 (47%), Positives = 59/94 (61%)
Frame = +2
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F Y L AT +F NK+G+GGFG VYKGVL DG+ AIK L ++ +F E+N+
Sbjct: 284 FTYKELKIATDNFSPVNKIGEGGFGPVYKGVLKDGKVGAIKVLSAESKQGVKEFMTEINV 463
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
IS +EH+NLV+L GC G +LVY + N SL
Sbjct: 464 ISEIEHENLVQLYGCCVEGNHRILVYNYHENNSL 565
>BP058703
Length = 366
Score = 90.9 bits (224), Expect = 4e-19
Identities = 45/94 (47%), Positives = 60/94 (62%)
Frame = +2
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F L RAT +++ S LGQGG+G VYKG+L DG +A+KR R + F NEV I
Sbjct: 83 FTAEELQRATDNYNRSRFLGQGGYGMVYKGMLPDGTIVAVKRSKEIERSQIDTFVNEVVI 262
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
+S + H+N+V+LLGC LLVYEF+PN +L
Sbjct: 263 LSQINHRNIVKLLGCCLETETPLLVYEFIPNGTL 364
>TC19726 similar to UP|Q9XIS3 (Q9XIS3) Lectin-like protein kinase, partial
(30%)
Length = 728
Score = 90.1 bits (222), Expect = 6e-19
Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +3
Query: 279 VVGVIIGAYVWKRRYIQKKRRGSYDPDK-LAKTLQHNSLNFKYSTLDRATGSFHESNKLG 337
V+ +IG +W R +K+ GS K+L F Y L +AT +F E +KLG
Sbjct: 12 VIVAVIGGLLWWIRLKKKREEGSNSQILGTLKSLPGTPREFNYVELKKATNNFDEKHKLG 191
Query: 338 QGGFGTVYKGVLADGR-EIAIKRLYYNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSG 396
QGG+G VY+G+L + E+A+K + DF +E+ II+ + HK+LVRL G
Sbjct: 192 QGGYGVVYRGMLPKEKLEVAVKMFSRDKMKSTDDFLSELIIINRLRHKHLVRLQGWCHKN 371
Query: 397 PESLLVYEFLPNKSLDGFI 415
LLVY+++PN SLD I
Sbjct: 372 GVLLLVYDYMPNGSLDSHI 428
>TC19002 weakly similar to UP|Q9XJ10 (Q9XJ10) ESTs C22458(C62866), partial
(48%)
Length = 780
Score = 85.9 bits (211), Expect = 1e-17
Identities = 44/94 (46%), Positives = 59/94 (61%)
Frame = +1
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F L AT +F+ NKLG+GGFG+VY G L DG +IA+KRL + +F EV I
Sbjct: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEI 207
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
++ V HKNL+ L G G E L+VY+++PN SL
Sbjct: 208 LARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSL 309
>TC18848 weakly similar to UP|Q9SSQ6 (Q9SSQ6) F6D8.24 protein, partial (64%)
Length = 969
Score = 85.9 bits (211), Expect = 1e-17
Identities = 42/94 (44%), Positives = 58/94 (61%)
Frame = +2
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
F Y L ATG F + NKLG+GGFG+VY G +DG +IA+K+L N +F EV +
Sbjct: 266 FTYKELHAATGGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEV 445
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
+ V HKNL+ L G + L+VY+++PN SL
Sbjct: 446 LGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSL 547
>TC10873 similar to UP|Q9LDZ5 (Q9LDZ5) F2D10.13 (F5M15.3), partial (77%)
Length = 1478
Score = 85.1 bits (209), Expect = 2e-17
Identities = 42/96 (43%), Positives = 62/96 (63%)
Frame = +1
Query: 317 NFKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVN 376
+F + L AT +F E+N +G+GGFG VYKG L G +A+K+L ++ R +F EV
Sbjct: 412 SFGFRELADATRNFKEANLIGEGGFGKVYKGRLTTGEAVAVKQLSHDGRQGFQEFVMEVL 591
Query: 377 IISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLD 412
++S + H NLVRL+G G + LLVYE++P SL+
Sbjct: 592 MLSLLHHTNLVRLIGYCTDGDQRLLVYEYMPMGSLE 699
>AI967588
Length = 380
Score = 80.9 bits (198), Expect = 4e-16
Identities = 41/99 (41%), Positives = 59/99 (59%)
Frame = +3
Query: 314 NSLNFKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYN 373
+ L + + AT +F ++N +G GGFGTVYK L G+ +A+K+L +F
Sbjct: 9 HELKLTLADILEATDNFSKTNIIGDGGFGTVYKATLTSGKTVAVKKLSEAKTQGHREFMA 188
Query: 374 EVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLD 412
E+ + +V+H+NLV LLG G E LLVYE+L N SLD
Sbjct: 189 EMETLGNVKHQNLVSLLGYCSIGEEKLLVYEYLVNGSLD 305
>TC12526 similar to UP|Q39202 (Q39202) Receptor-like protein kinase
precursor , partial (9%)
Length = 692
Score = 79.0 bits (193), Expect = 1e-15
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Frame = +2
Query: 251 LNKEAENGSSGGNVMVIVVAVVSSVVVTVVGVIIGAYVWKRRYIQKKRRGSYDPDKLAKT 310
+NK + G+V++ A ++ V ++G I + + +Y +K R+G+
Sbjct: 95 VNKNRNTLALVGSVLLGTSAFLN---VVLIGAICFSTFFILQYKKKLRKGTTGS---GVQ 256
Query: 311 LQHNSLNFKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREI---AIKRLYYNN--- 364
L+ N F Y L+ AT F++ +LG+G FG VY+GVL G I A+K+L NN
Sbjct: 257 LETNLCCFTYQELEEATNGFNK--ELGRGAFGVVYEGVLNMGSTITRVAVKKL--NNFLL 424
Query: 365 RHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDGFI 415
+F NE+N I HKNLVRL+G +G E LL+YE++ N +L F+
Sbjct: 425 EEVHKEFKNELNAIGLTHHKNLVRLIGFCEAGSERLLIYEYMSNGTLASFL 577
>TC12871 similar to UP|Q8H4R9 (Q8H4R9) OJ1457_D07.1 protein, partial (23%)
Length = 770
Score = 75.9 bits (185), Expect = 1e-14
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Frame = +1
Query: 307 LAKTLQHNSLNFKYSTLDRATGSFHESNKLGQGGFGTVYKGVL--ADGRE-----IAIKR 359
L + +HN F + L AT F+ K+G+GGFG+VYKG + DG +AIKR
Sbjct: 367 LYREKEHNFRVFDWKELRDATNGFNRMLKIGEGGFGSVYKGSIKPPDGESGDPIVVAIKR 546
Query: 360 LYYNNRHRAADFYNEVNIISSVEHKNLVRLLG-CSCSGP---ESLLVYEFLPNKSLD 412
L ++ EV +S V H NLV+LLG CS G + LLVYE++PN+SL+
Sbjct: 547 LNTQGFQGHKEWLAEVQFLSIVNHPNLVKLLGFCSVDGERGIQRLLVYEYMPNRSLE 717
>TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete
Length = 3495
Score = 73.6 bits (179), Expect = 6e-14
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +3
Query: 336 LGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCS 395
+G+GGFG+VY+G L DG+E+A+K + +F NE+N++S+++H+NLV LLG
Sbjct: 2181 IGEGGFGSVYRGTLNDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNE 2360
Query: 396 GPESLLVYEFLPNKSL 411
+ +LVY F+ N SL
Sbjct: 2361 SDQQILVYPFMSNGSL 2408
>TC19526 homologue to UP|AAQ96340 (AAQ96340) Protein kinase-like protein,
partial (37%)
Length = 432
Score = 72.4 bits (176), Expect = 1e-13
Identities = 41/96 (42%), Positives = 57/96 (58%), Gaps = 1/96 (1%)
Frame = +1
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVL-ADGREIAIKRLYYNNRHRAADFYNEVN 376
F + L AT +F LG+GGFG VYKG L + G+ +A+K+L N +F EV
Sbjct: 52 FTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVL 231
Query: 377 IISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLD 412
++S + H NLV L+G G + LLVYEF+P SL+
Sbjct: 232 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLE 339
>TC9462 similar to UP|O49840 (O49840) Protein kinase (AT2G02800/T20F6.6) ,
partial (37%)
Length = 576
Score = 72.0 bits (175), Expect = 2e-13
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Frame = +1
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLAD----------GREIAIKRLYYNNRHR 367
F ++ L AT +F + LG+GGFG VYKG + + G +A+KRL
Sbjct: 196 FTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHSFTAAKPGSGMVVAVKRLKPEGFQG 375
Query: 368 AADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDGFI 415
++ EVN + + H NLV+L+G G LLVYEF+P SLD +
Sbjct: 376 HKEWLTEVNYLGQLYHPNLVKLIGYCLDGENRLLVYEFMPKGSLDNHL 519
>TC16643 similar to UP|Q9FIH3 (Q9FIH3) Serine/threonine protein kinase-like
protein, partial (28%)
Length = 585
Score = 71.6 bits (174), Expect = 2e-13
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = +1
Query: 316 LNFKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEV 375
L L RAT +F +G G FG VYK L+ G +A+K+L + +F E+
Sbjct: 235 LKISMEELSRATENFSPRLIVGDGSFGLVYKARLSTGAVVAVKKLSPDAFQGFREFAAEM 414
Query: 376 NIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDGFI 415
+S + H+N+V++LG SGPE LLVYEF+ +LD ++
Sbjct: 415 ETLSKLGHRNIVKILGYWASGPERLLVYEFIEKGNLDQWL 534
>TC19546 similar to UP|Q40543 (Q40543) Protein-serine/threonine kinase ,
partial (46%)
Length = 731
Score = 70.9 bits (172), Expect = 4e-13
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +1
Query: 318 FKYSTLDRATGSFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNI 377
+ Y + +AT +F + LGQG FGTVYK + G +A+K L N++ +F EV++
Sbjct: 199 YSYKDIQKATQNF--TTILGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEHEFQTEVHL 372
Query: 378 ISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSL 411
+ + H+NLV L+G + +LVY+F+ N SL
Sbjct: 373 LGRLHHRNLVNLVGFCVDKGQRILVYQFMSNGSL 474
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.320 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,366,888
Number of Sequences: 28460
Number of extensions: 105083
Number of successful extensions: 703
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of query: 415
length of database: 4,897,600
effective HSP length: 93
effective length of query: 322
effective length of database: 2,250,820
effective search space: 724764040
effective search space used: 724764040
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0076c.8