BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0076a.6
(123 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activati... 58 5e-10
AW719496 45 5e-06
TC10917 similar to UP|Q7M4A3 (Q7M4A3) Spermatid-specific protein... 42 2e-05
BP034655 39 3e-04
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 38 6e-04
BP048314 37 7e-04
BP085186 36 0.002
AW720177 34 0.006
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 34 0.006
TC16950 similar to UP|RGP1_HUMAN (P46060) Ran GTPase-activating ... 34 0.008
TC10388 similar to UP|Q84L20 (Q84L20) L-galactose dehydrogenase,... 33 0.011
AV426624 33 0.014
BP049555 33 0.014
AV777838 33 0.014
AW720070 33 0.018
BP039012 32 0.024
TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subun... 32 0.024
TC9623 homologue to UP|Q8H1K8 (Q8H1K8) Stromal ascorbate peroxid... 32 0.031
TC14792 similar to UP|O73620 (O73620) Nuclear protein SDK2, part... 32 0.041
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 31 0.053
>TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activation domain
interacting protein PTIP, partial (3%)
Length = 1502
Score = 57.8 bits (138), Expect = 5e-10
Identities = 32/89 (35%), Positives = 43/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 30 RRPLKP-IYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPP 88
++P P + +T K E + E E C +TPKG++ RIP CPP
Sbjct: 733 KKPEVPTVLPSTCSSKGSTEEGDREMNVCEVIDGPNSSACCSTPKGQKFRIPEISTCPPA 912
Query: 89 PRKPKPSLKCNFRGG--EFFTPPDLEAVF 115
P+KP+ C+ R FFTPPDLE F
Sbjct: 913 PKKPRVLSNCSLRRSPLSFFTPPDLELFF 999
>AW719496
Length = 492
Score = 44.7 bits (104), Expect = 5e-06
Identities = 29/97 (29%), Positives = 43/97 (43%), Gaps = 11/97 (11%)
Frame = +1
Query: 31 RPLKPIYTTTPVEKTEQHEE-----EEEEEEEETFMEEEEEECSTTPKGEEARIPATLKC 85
R + P T T ++K ++ + E EEE +EE+ TPK + RIP L C
Sbjct: 139 RSMGPASTKTRMKKKKKKKSMARPHHEIVAEEEVLDNKEEDITCCTPKAKRFRIPEVLTC 318
Query: 86 PPPPRKPK------PSLKCNFRGGEFFTPPDLEAVFI 116
PP P+K + P N F PD++ F+
Sbjct: 319 PPAPKKRRVTVPVPPCSSINRSPIALFASPDIDLFFL 429
>TC10917 similar to UP|Q7M4A3 (Q7M4A3) Spermatid-specific protein T2
precursor, partial (21%)
Length = 589
Score = 42.4 bits (98), Expect = 2e-05
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +1
Query: 66 EECSTTPKGEEARIPATLKCPPPPRKPKPSLKCN------FRGGEFFTPPDLEAVF 115
E+ TP +E++IPA L CPP P+KPK + C F+ E D++A F
Sbjct: 58 EQSYRTPTSKESKIPAILNCPPAPKKPKTFVSCKRKLNDAFQFFEVKNKEDMDAFF 225
>BP034655
Length = 517
Score = 38.9 bits (89), Expect = 3e-04
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKPSLKCNFRG 102
E+ E+ EEEEEEEEEE EEEE+E +E IP P + P++ N
Sbjct: 151 EEEEEEEEEEEEEEEEEEEEEEEDEEDDEEDEDEDYIPVA-----PSHRVSPNVHQN--- 306
Query: 103 GEFFTPPDLEAVFIRHVERAN 123
T +E + I E+ N
Sbjct: 307 ---PTSDSVEVILIPDSEQQN 360
Score = 37.7 bits (86), Expect = 6e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEEEE EEEEEE
Sbjct: 145 EEEEEEEEEEEEEEEEEEEEEEEEE 219
Score = 36.6 bits (83), Expect = 0.001
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEEEE EEEEE+
Sbjct: 148 EEEEEEEEEEEEEEEEEEEEEEEED 222
Score = 36.6 bits (83), Expect = 0.001
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
++ E+ EEEEEEEEEE EEEEEE
Sbjct: 142 DEEEEEEEEEEEEEEEEEEEEEEEE 216
Score = 36.2 bits (82), Expect = 0.002
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +1
Query: 46 EQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E+ EEEEEEEEEE EEEEEE EE
Sbjct: 148 EEEEEEEEEEEEEEEEEEEEEEEEDEEDDEE 240
Score = 35.0 bits (79), Expect = 0.004
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 45 TEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
++ EEEEEEEEEE EEEEEE + EE
Sbjct: 133 SDDDEEEEEEEEEEEEEEEEEEEEEEEEEDEE 228
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 37.7 bits (86), Expect = 6e-04
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
VE+ E+ EEEEEE EEE EEEEEE + E+
Sbjct: 229 VEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEED 333
Score = 36.2 bits (82), Expect = 0.002
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEE 67
VE+ + EEEEEEEEEE EEEEEE
Sbjct: 217 VEEEVEEEEEEEEEEEEGEEEEEEEE 294
Score = 35.8 bits (81), Expect = 0.002
Identities = 19/34 (55%), Positives = 21/34 (60%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E E+ EEEEEEEE E EEEEEE + EE
Sbjct: 226 EVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEE 327
Score = 35.8 bits (81), Expect = 0.002
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +1
Query: 37 YTTTPVEKTEQHEEEEEEEEEETFMEEEEEE 67
Y E E+ EEEEEEEEEE EEEEEE
Sbjct: 196 YEEVEEEVEEEVEEEEEEEEEEEEGEEEEEE 288
Score = 35.4 bits (80), Expect = 0.003
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEEE EEEEEE
Sbjct: 223 EEVEEEEEEEEEEEEGEEEEEEEEE 297
Score = 34.3 bits (77), Expect = 0.006
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E+ E+ EEEE EEEEE EEEE E + +E
Sbjct: 238 EEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDE 339
Score = 33.9 bits (76), Expect = 0.008
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTP 72
E+ E+ EEEEEEEEEE +E E EE P
Sbjct: 253 EEEEEGEEEEEEEEEEEEVEAEAEEEDDEP 342
Score = 32.7 bits (73), Expect = 0.018
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPA 81
E+ E+ EEE EEEEE EEEE E + EE + A
Sbjct: 199 EEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEA 315
Score = 32.0 bits (71), Expect = 0.031
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 44 KTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
+ +++EE EEE EEE +EEEEEE +GEE
Sbjct: 184 EVQEYEEVEEEVEEE--VEEEEEEEEEEEEGEE 276
Score = 32.0 bits (71), Expect = 0.031
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
V++ E+ EEE EEE EE EEEEEE + EE
Sbjct: 187 VQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEE 291
Score = 31.2 bits (69), Expect = 0.053
Identities = 20/46 (43%), Positives = 23/46 (49%)
Frame = +1
Query: 46 EQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRK 91
E EE EEEEEEE EE EEE + EE A + P +K
Sbjct: 214 EVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQK 351
Score = 30.8 bits (68), Expect = 0.069
Identities = 18/34 (52%), Positives = 19/34 (54%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E E EE EEE EEE EEEEEE + EE
Sbjct: 193 EYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEE 294
>BP048314
Length = 394
Score = 37.4 bits (85), Expect = 7e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 46 EQHEEEEEEEEEETFMEEEEEE 67
++HEEEEEEEEEE EEEEEE
Sbjct: 175 DKHEEEEEEEEEEEEEEEEEEE 240
Score = 33.1 bits (74), Expect = 0.014
Identities = 16/29 (55%), Positives = 18/29 (61%)
Frame = +1
Query: 47 QHEEEEEEEEEETFMEEEEEECSTTPKGE 75
+ EEEEEEEEEE EEEE C + E
Sbjct: 184 EEEEEEEEEEEEEEEEEEEAMCKDCLRNE 270
Score = 29.3 bits (64), Expect = 0.20
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFM 61
E+ E+ EEEEEEEEEE M
Sbjct: 190 EEEEEEEEEEEEEEEEEAM 246
Score = 29.3 bits (64), Expect = 0.20
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEE 63
E+ E+ EEEEEEEEEE ++
Sbjct: 193 EEEEEEEEEEEEEEEEAMCKD 255
Score = 26.9 bits (58), Expect = 1.00
Identities = 13/31 (41%), Positives = 18/31 (57%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPK 73
E+ E+ EEEEEEEEE + E +P+
Sbjct: 196 EEEEEEEEEEEEEEEAMCKDCLRNELFVSPE 288
>BP085186
Length = 388
Score = 36.2 bits (82), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGE 75
E+ E+ EEEEEEEE E E+ EEE T +GE
Sbjct: 241 EEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGE 143
Score = 35.4 bits (80), Expect = 0.003
Identities = 19/34 (55%), Positives = 20/34 (57%)
Frame = -1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E E+ EEEEEEEEEE EEEE E EE
Sbjct: 268 EGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEE 167
Score = 35.0 bits (79), Expect = 0.004
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -1
Query: 47 QHEEEEEEEEEETFMEEEEEECSTTPKGEEARI 79
+ EEEEEEEEEE EEEEE K EE +
Sbjct: 259 EEEEEEEEEEEEEEEEEEEEAEPEEEKNEEENV 161
Score = 34.3 bits (77), Expect = 0.006
Identities = 18/37 (48%), Positives = 22/37 (58%)
Frame = -1
Query: 40 TPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
+P + EEEEEEEEE EEEEEE P+ E+
Sbjct: 289 SPDNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEK 179
Score = 29.6 bits (65), Expect = 0.15
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = -1
Query: 49 EEEEEEEEEETFMEEEEEECSTTPKGEEAR 78
E EEEEEEE EEEEEE + EE +
Sbjct: 268 EGNEEEEEEEEEEEEEEEEEEEEAEPEEEK 179
>AW720177
Length = 505
Score = 34.3 bits (77), Expect = 0.006
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 45 TEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKPS 95
TE+ EEEEEEEEE EE +P +P++ K PP + KPS
Sbjct: 31 TEEEEEEEEEEEEAA--EEA*RNRILSPIAFTF*LPSSTKKSPPSKTSKPS 177
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 34.3 bits (77), Expect = 0.006
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEEEE EEEE E
Sbjct: 161 EEEEEVEEEEEEEEEEEEEEEEEAE 235
Score = 34.3 bits (77), Expect = 0.006
Identities = 16/26 (61%), Positives = 19/26 (72%)
Frame = +2
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEE 67
+ + E+ E EEEEEEEE EEEEEE
Sbjct: 152 IAREEEEEVEEEEEEEEEEEEEEEEE 229
Score = 26.9 bits (58), Expect = 1.00
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 46 EQHEEEEEEEEEETFMEE 63
E+ EEEEEEEEEE E+
Sbjct: 185 EEEEEEEEEEEEEEEAEK 238
Score = 26.2 bits (56), Expect = 1.7
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 54 EEEEETFMEEEEEECSTTPKGEEA 77
EEEEE EEEEEE + EEA
Sbjct: 161 EEEEEVEEEEEEEEEEEEEEEEEA 232
Score = 24.6 bits (52), Expect = 5.0
Identities = 10/16 (62%), Positives = 13/16 (80%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEE 58
E+ E+ EEEEEEE E+
Sbjct: 191 EEEEEEEEEEEEEAEK 238
>TC16950 similar to UP|RGP1_HUMAN (P46060) Ran GTPase-activating protein 1,
partial (3%)
Length = 643
Score = 33.9 bits (76), Expect = 0.008
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 29 LRRPLKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEE 66
++ PL P P E E+ E++EEEEEE+ EE ++
Sbjct: 289 MKTPLPPPIADPPEEDEEEEEKKEEEEEEDPDKEESDK 402
Score = 30.4 bits (67), Expect = 0.090
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +1
Query: 30 RRP-----LKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
RRP P+ T P + EE+EEEEE++ EEE+ + + K E+
Sbjct: 256 RRPDIFPQFSPMKTPLPPPIADPPEEDEEEEEKKEEEEEEDPDKEESDKPEQ 411
>TC10388 similar to UP|Q84L20 (Q84L20) L-galactose dehydrogenase, partial
(44%)
Length = 466
Score = 33.5 bits (75), Expect = 0.011
Identities = 18/52 (34%), Positives = 26/52 (49%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKP 94
EKT+Q + E+ +F+ EE + S+ G E + AT P P KP P
Sbjct: 6 EKTQQ----TNKPEKWSFVNSEEPD*SSAQSGSEPPLSATSSAPSPKNKPSP 149
>AV426624
Length = 422
Score = 33.1 bits (74), Expect = 0.014
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 44 KTEQHEEEEEEEEEETFMEEEEE 66
K Q EEEEEEEEEE EEE+E
Sbjct: 333 KGSQREEEEEEEEEEEEEEEEDE 401
Score = 30.0 bits (66), Expect = 0.12
Identities = 14/18 (77%), Positives = 15/18 (82%)
Frame = +3
Query: 50 EEEEEEEEETFMEEEEEE 67
EEEEEEEEE EEEE+E
Sbjct: 348 EEEEEEEEEEEEEEEEDE 401
Score = 29.3 bits (64), Expect = 0.20
Identities = 12/18 (66%), Positives = 15/18 (82%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETF 60
E+ E+ EEEEEEEE+E F
Sbjct: 354 EEEEEEEEEEEEEEDERF 407
Score = 28.9 bits (63), Expect = 0.26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 49 EEEEEEEEEETFMEEEEEE 67
+ EEEEEEEE EEEEE+
Sbjct: 342 QREEEEEEEEEEEEEEEED 398
Score = 28.9 bits (63), Expect = 0.26
Identities = 14/23 (60%), Positives = 18/23 (77%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEE 65
++ E+ EEEEEEEEEE EE+E
Sbjct: 342 QREEEEEEEEEEEEEE---EEDE 401
Score = 25.0 bits (53), Expect = 3.8
Identities = 12/22 (54%), Positives = 15/22 (67%)
Frame = +3
Query: 46 EQHEEEEEEEEEETFMEEEEEE 67
E+ + + EEEEE EEEEEE
Sbjct: 324 EE*KGSQREEEEEEEEEEEEEE 389
>BP049555
Length = 555
Score = 33.1 bits (74), Expect = 0.014
Identities = 18/48 (37%), Positives = 26/48 (53%)
Frame = +2
Query: 34 KPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPA 81
+P P EKTE+ EE+ EE+ ++EEE+ K EE + PA
Sbjct: 248 QPQAEAKPEEKTEEKAEEKAEEKPAAEEKKEEEKPEEEKKEEEPKPPA 391
>AV777838
Length = 565
Score = 33.1 bits (74), Expect = 0.014
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 49 EEEEEEEEEETFMEEEEEE 67
EEEEEEEEEE EEEEEE
Sbjct: 272 EEEEEEEEEEEEEEEEEEE 216
Score = 31.6 bits (70), Expect = 0.041
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -3
Query: 41 PVEKTEQHEEEEEEEEEETFMEEEEE 66
P EEEEEEEEEE EEEEE
Sbjct: 293 PAAVALMEEEEEEEEEEEEEEEEEEE 216
>AW720070
Length = 484
Score = 32.7 bits (73), Expect = 0.018
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 45 TEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
++ EEEEEEEEEE E EE TT + EE
Sbjct: 97 SDSREEEEEEEEEEEEEEAGEEGIITTTREEE 192
Score = 32.3 bits (72), Expect = 0.024
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEE---------TFMEEEEEECSTTPK 73
+ E+ EEEEEEEEEE T EEEEEE ++ K
Sbjct: 100 DSREEEEEEEEEEEEEEAGEEGIITTTREEEEEEEESSSK 219
Score = 30.4 bits (67), Expect = 0.090
Identities = 19/42 (45%), Positives = 24/42 (56%), Gaps = 2/42 (4%)
Frame = +1
Query: 47 QHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLK--CP 86
+ EEEEEEEEEE EE +TT + EE ++ K CP
Sbjct: 106 REEEEEEEEEEEEEEAGEEGIITTTREEEEEEEESSSKHHCP 231
Score = 27.3 bits (59), Expect = 0.77
Identities = 17/40 (42%), Positives = 20/40 (49%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPAT 82
E + + + EEEEEE EEEEE GEE I T
Sbjct: 79 EAVKGYSDSREEEEEEEEEEEEEE------AGEEGIITTT 180
>BP039012
Length = 582
Score = 32.3 bits (72), Expect = 0.024
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Frame = +3
Query: 25 TGIALRRPLKPIYTTTP--VEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPAT 82
T A PL P+ T P ++ ++Q E T + TTP + +T
Sbjct: 102 TATATHTPLLPLTTPPPPLIKPSDQCESSTSSSSSTTSFTQWRFSLPTTPNTTTTQNDST 281
Query: 83 LKCPPPPRKPKPS 95
PPPP P PS
Sbjct: 282 T--PPPPPSPSPS 314
>TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subunit-like
protein, partial (20%)
Length = 979
Score = 32.3 bits (72), Expect = 0.024
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEE 66
+E ++ EEEEEEEEEE F+E E E
Sbjct: 130 IEIRDEEEEEEEEEEEEGFVEIEIE 56
Score = 26.2 bits (56), Expect = 1.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 43 EKTEQHEEEEEEEEEETFMEEE 64
E+ E +EEEEEEEEE EEE
Sbjct: 136 ERIEIRDEEEEEEEEE---EEE 80
Score = 25.0 bits (53), Expect = 3.8
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 46 EQHEEEEEEEEEETFMEEEEEE 67
E+ E +EEEEEE EEEEEE
Sbjct: 136 ERIEIRDEEEEEE---EEEEEE 80
Score = 23.9 bits (50), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEE 66
+ E+ EEEEEEEE +E E E
Sbjct: 124 IRDEEEEEEEEEEEEGFVEIEIEIE 50
>TC9623 homologue to UP|Q8H1K8 (Q8H1K8) Stromal ascorbate peroxidase,
partial (42%)
Length = 640
Score = 32.0 bits (71), Expect = 0.031
Identities = 18/47 (38%), Positives = 25/47 (52%)
Frame = -1
Query: 44 KTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPR 90
K E+ EEEEEEE E+ EE EEE + + + ++ PPR
Sbjct: 196 KEEREEEEEEEENEKKEREEYEEE--ESERVALVAVEGIMRAAAPPR 62
Score = 29.6 bits (65), Expect = 0.15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEE E++E EEEE E
Sbjct: 190 EREEEEEEEENEKKEREEYEEEESE 116
>TC14792 similar to UP|O73620 (O73620) Nuclear protein SDK2, partial (5%)
Length = 492
Score = 31.6 bits (70), Expect = 0.041
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 11/50 (22%)
Frame = +3
Query: 29 LRRPLKPIYTTTPVEK--TEQHEE---------EEEEEEEETFMEEEEEE 67
+R+P + +TTP +K T++H++ EEEEEEE+ +EEE E
Sbjct: 258 IRKPKISLKSTTPWKKNKTQKHQQQQSLNHNNNEEEEEEEDLELEEEPVE 407
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 31.2 bits (69), Expect = 0.053
Identities = 19/46 (41%), Positives = 23/46 (49%)
Frame = -3
Query: 49 EEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKP 94
EEEE EEE EEEEE+ +T P PA P +P+P
Sbjct: 773 EEEELSSEEEGSSEEEEEDETTAPAP-----PAATTSHTKPPQPEP 651
Score = 26.9 bits (58), Expect = 1.00
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPP 88
V+ EEE EEE + EEEE+E TT A + K P P
Sbjct: 791 VKHAAAEEEELSSEEEGSSEEEEEDE--TTAPAPPAATTSHTKPPQP 657
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.309 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,540,814
Number of Sequences: 28460
Number of extensions: 49592
Number of successful extensions: 1936
Number of sequences better than 10.0: 267
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of query: 123
length of database: 4,897,600
effective HSP length: 79
effective length of query: 44
effective length of database: 2,649,260
effective search space: 116567440
effective search space used: 116567440
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 49 (23.5 bits)
Lotus: description of TM0076a.6