BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0073.8
(1156 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (... 295 4e-95
AV409408 127 8e-30
CB828263 125 4e-29
BP064614 122 2e-28
AV406755 109 3e-24
AV779547 107 1e-23
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 102 3e-22
BP045440 101 6e-22
BP065014 92 4e-19
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 89 5e-18
AV410283 86 4e-17
TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like pr... 84 1e-16
BP065724 74 1e-13
AV778571 71 1e-12
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 64 1e-10
AW719637 60 2e-09
TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodula... 60 3e-09
AI967395 57 2e-08
BP062551 45 2e-08
TC10550 weakly similar to UP|Q40392 (Q40392) Virus resistance (N... 56 3e-08
>TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (28%)
Length = 918
Score = 295 bits (756), Expect(2) = 4e-95
Identities = 146/226 (64%), Positives = 177/226 (77%)
Frame = +1
Query: 334 ADEIYEVQGMSYQDSLELFRLNAFKEDYPLEGYANLIVEVLKYAKGVPLALQVLGSLLYD 393
ADEIYEV+ MS++DSL+LF LNAFK + PLE Y +L ++L YAKG+PLAL+VLG LY
Sbjct: 1 ADEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYG 180
Query: 394 KEREVWESELKKLKELPNVDIFDVLKLSYDGLDDEPKDIFLDITCFYAGDFVDKVVELLD 453
+ER+ WES+L KL++LP+ +I +VLKLSYDGLDD+ KDIFLDI CFY G + V + LD
Sbjct: 181 RERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLD 360
Query: 454 SCGFSADIGMDVLKDRGLISILEDRIAVHDLVLEMGREIVRQQCVSDPGKHSHLWNHKEI 513
SCGF ADIGM+VLKDR LISILE RI +HDL+ MG+EIVRQQC +DPGK S LWN +
Sbjct: 361 SCGFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQT 540
Query: 514 YHVVRKNKGTDAIQCIFLDMCQIEKVQLHPEIFKSMPNIRMLYFHK 559
Y V+ KNKGTDAIQCIFL C I+ V LH E FK M N+RML F+K
Sbjct: 541 YDVLGKNKGTDAIQCIFLYTCPIKIVNLHAETFKYMTNLRMLQFYK 678
Score = 71.2 bits (173), Expect(2) = 4e-95
Identities = 35/61 (57%), Positives = 42/61 (68%)
Frame = +2
Query: 568 SNVIVPDLLESLPNGLKVLHWDEFPQRSFPLDFCPEKLVKLHMRESRLEQLWGDDQVLQS 627
SNVI+P L SLPN L+ L WD FP R FPLDFCP+ LVKL MR+S LE ++ Q+
Sbjct: 701 SNVILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHFGRKIRIYQT 880
Query: 628 L 628
L
Sbjct: 881 L 883
>AV409408
Length = 430
Score = 127 bits (320), Expect = 8e-30
Identities = 63/142 (44%), Positives = 96/142 (67%)
Frame = +2
Query: 379 GVPLALQVLGSLLYDKEREVWESELKKLKELPNVDIFDVLKLSYDGLDDEPKDIFLDITC 438
G+PLAL+VLGS L + WE L K+K++P+ DI + L++SYD L+DE K +FLDI C
Sbjct: 5 GLPLALEVLGSFLCGRSLSDWEDALIKIKKVPHDDILNKLRISYDMLEDEHKTLFLDIAC 184
Query: 439 FYAGDFVDKVVELLDSCGFSADIGMDVLKDRGLISILEDRIAVHDLVLEMGREIVRQQCV 498
F+ G + KV++LL SCG +G++VL ++ L++ I +HDL+ EMG+ V +
Sbjct: 185 FFKGWYKHKVIQLLGSCGLHPTVGINVLIEKSLLTFDGRVIGMHDLLEEMGKTEVFLESP 364
Query: 499 SDPGKHSHLWNHKEIYHVVRKN 520
+DPG+ S LW+ ++I V+RKN
Sbjct: 365 NDPGRRSRLWSLEDIDQVLRKN 430
>CB828263
Length = 570
Score = 125 bits (314), Expect = 4e-29
Identities = 71/157 (45%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Frame = +2
Query: 59 LETGDEIC----KAIEASTIYVIVFSENYASSRCCLDELVKIMECKMNYDRAVIPIFYRV 114
L+ GDEI +AIE + + VIVFS+NY +S+ CLDELVKI+ECK + V+P+FY +
Sbjct: 8 LQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFYDI 187
Query: 115 DPSTVRHQTNSYGDAFDEHQNRLVPGVV--MQRWKKALLEAADLSGYHSIAARSESMLID 172
DPS VR+QT +Y +AF +H G V +Q+W++AL EAA+LSG+ R ES +I+
Sbjct: 188 DPSHVRNQTGTYAEAFVKH------GQVDKVQKWREALREAANLSGWDCSVNRMESEVIE 349
Query: 173 RIAQDIFKKLNPPFSQGMLGIDKHIAQIQSLLQLDSE 209
+IA+D+ +KLN + + +D+ IA+ + L QL E
Sbjct: 350 KIAKDVLEKLNRVY---VGDLDEKIAKFEQLAQLQRE 451
>BP064614
Length = 473
Score = 122 bits (307), Expect = 2e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = -3
Query: 1097 FIWNYYLMDSASNHNGIIHAHNFTFEISNGLYLKSSSLVKECGIYPLYRKEKDDDDGRYV 1156
FIWNYYLMDSASN +GIIHAHNFTFEI++GLYLKSSSLVKECGIYPLYRKEKDDDDGRYV
Sbjct: 471 FIWNYYLMDSASNPHGIIHAHNFTFEITHGLYLKSSSLVKECGIYPLYRKEKDDDDGRYV 292
>AV406755
Length = 425
Score = 109 bits (272), Expect = 3e-24
Identities = 55/118 (46%), Positives = 78/118 (65%), Gaps = 5/118 (4%)
Frame = +3
Query: 18 PPNPLKYDVFLSFSGEDTGKTFTSHLHAALRRKNVFID-DRSLETGDEIC----KAIEAS 72
P + YDVFLSF GE++ ++FTSHL+ AL+ + + D L+ G++I KAIE S
Sbjct: 66 PKSKWSYDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMDNELQRGEDISSSLLKAIEDS 245
Query: 73 TIYVIVFSENYASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAF 130
I +I+FS NY S+ CLDEL KI+EC+ + V+P+FY VDPS +R Q + G+AF
Sbjct: 246 RIAIIIFSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRKQRGTVGEAF 419
>AV779547
Length = 556
Score = 107 bits (267), Expect = 1e-23
Identities = 64/139 (46%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Frame = +1
Query: 28 LSFSGEDTGKTFTSHLHAALRRKN--VFIDDRSLETGD----EICKAIEASTIYVIVFSE 81
+SF GEDT FT HL AL K F DD L G E+ +AIE S I ++VFS+
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 82 NYASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQNRLVPGV 141
YASS CL EL KI + + + V+P+ V PS VR Q+ +YG+AF +H+ R +
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQSGNYGEAFLKHEERFKEDL 468
Query: 142 VM-QRWKKALLEAADLSGY 159
M QRW+KAL E ADLSG+
Sbjct: 469 EMVQRWRKALAEVADLSGW 525
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 102 bits (255), Expect = 3e-22
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Frame = +1
Query: 24 YDVFLSFSGEDTGKTFTSHLHAALRRKNV--FIDDRSLETGDEIC-----KAIEASTIYV 76
YDVF+S DT F+ L+ AL K + FIDD L D+I KAIE+S I +
Sbjct: 103 YDVFISLITSDTRFGFSGDLYTALSDKGILTFIDD-GLPRPDDIMSTVNSKAIESSRIAI 279
Query: 77 IVFSENYASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQNR 136
+V SENYASS CLDEL+ I++ + + P+FY+V+PS VR+Q +G AF H+ R
Sbjct: 280 VVISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVRYQKGGFGKAFASHEER 459
Query: 137 L-VPGVVMQRWKKALLEAADLSGYH 160
+++W+ AL + ADL +H
Sbjct: 460 FGSDSAKVRKWRNALKQVADLKAFH 534
>BP045440
Length = 535
Score = 101 bits (252), Expect = 6e-22
Identities = 59/144 (40%), Positives = 79/144 (53%), Gaps = 7/144 (4%)
Frame = -3
Query: 23 KYDVFLSFSGEDTGKTFTSHLHAALRRKN--VFIDDRSLETGDEICKA---IEASTIYVI 77
+Y +F+SF G DT FT L+ L R+ F DD SLE G I K IE S +I
Sbjct: 530 RYQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPIEKLLDDIEESRFAII 351
Query: 78 VFSENYASSRCCLDELVKIMECK--MNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQN 135
+ S+NYA S CL EL KI+ECK ++ V+P V P+ VRH N Y DA +H+
Sbjct: 350 ILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVRHVINRYADAMAKHEK 171
Query: 136 RLVPGVVMQRWKKALLEAADLSGY 159
+ +Q WKKAL + L+G+
Sbjct: 170 NGIDSKTIQAWKKALFDVCTLTGF 99
>BP065014
Length = 498
Score = 92.4 bits (228), Expect = 4e-19
Identities = 53/140 (37%), Positives = 80/140 (56%), Gaps = 12/140 (8%)
Frame = -2
Query: 53 FIDDRSLETG---DEICKAIEASTIYVIVFSENYASSRCCLDELVKIMECKMNYDRAVIP 109
F DD SLE G +E+ AIE S + ++V SEN+A S+ CL ELVKI++C+ V+P
Sbjct: 497 FKDDLSLEDGAPIEELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVLP 318
Query: 110 IFYRVDPSTVRHQTNSYGDAFDEHQNRL-VPGVVMQRWKKALLEAADLSGYH-------- 160
IFY+V+P+ +RH YG+A EH+ +L ++ W +AL + + L G
Sbjct: 317 IFYKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKGEPYKGYVVKL 138
Query: 161 SIAARSESMLIDRIAQDIFK 180
SI + S+L++ IFK
Sbjct: 137 SITFQLSSILLNSFRMYIFK 78
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 88.6 bits (218), Expect = 5e-18
Identities = 57/141 (40%), Positives = 79/141 (55%), Gaps = 7/141 (4%)
Frame = +1
Query: 43 LHAALRRKN--VFIDDRSLETGDEICKAI----EASTIYVIVFSENYASSRCCLDELVKI 96
L+ ALRR+ F+DD L G+EI K++ E S + +IVFSENY S CLDELVKI
Sbjct: 1 LYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKI 180
Query: 97 MECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQ-NRLVPGVVMQRWKKALLEAAD 155
+EC + V PIFY+V+ S V Q NSY A H+ N +++W+ AL A
Sbjct: 181 VECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALSAMAK 360
Query: 156 LSGYHSIAARSESMLIDRIAQ 176
L G++ + E I +I +
Sbjct: 361 LEGHNVKENKYEYEFIKKIVE 423
>AV410283
Length = 426
Score = 85.5 bits (210), Expect = 4e-17
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 8/137 (5%)
Frame = +1
Query: 266 SKLLGEDIQSNG----LNYAIERVKRA----KVLLILDDLKISIPILELIGGHGNFGQGS 317
+++LG D+ S G +N + +KR KVLLILDD+ + L+G F +GS
Sbjct: 4 NRILG-DLSSGGTVNDVNDGVSAIKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGS 180
Query: 318 RIIVTSRHRHVLKNAEADEIYEVQGMSYQDSLELFRLNAFKEDYPLEGYANLIVEVLKYA 377
R+++T+R+ VL + D YEV+ + +L LF +A + P EG++NL +++K
Sbjct: 181 RVVITTRNTQVLPESYVDMFYEVRELELSAALALFCHHAMRRKKPAEGFSNLSKQIVKKT 360
Query: 378 KGVPLALQVLGSLLYDK 394
G+PLAL+V+GS L+DK
Sbjct: 361 GGLPLALEVIGSFLFDK 411
>TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like protein
(Fragment), partial (36%)
Length = 859
Score = 84.3 bits (207), Expect = 1e-16
Identities = 39/103 (37%), Positives = 71/103 (68%)
Frame = +3
Query: 185 PFSQGMLGIDKHIAQIQSLLQLDSEAVRIIGICGMGGIGKSTLAEALYHKLGTQFSSRCL 244
P ++ ++G+DK IA ++SLL +S+ VR+IGI GMGGIGK+T+AE ++++ +Q+ C
Sbjct: 531 PNTKELIGVDKSIAHLESLLCQESKDVRVIGIWGMGGIGKTTIAEEIFNRRHSQYEGICF 710
Query: 245 IVNAQQKIDRYGIYSLRKKYLSKLLGEDIQSNGLNYAIERVKR 287
+ + ++ ++G+ SLR+K S LL +D++ + N + +KR
Sbjct: 711 LSKVKDEL*KHGMQSLREKLFSTLLAQDVKIDTPNGMADDIKR 839
>BP065724
Length = 495
Score = 74.3 bits (181), Expect = 1e-13
Identities = 35/79 (44%), Positives = 50/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 83 YASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGDAFDEHQNRL-VPGV 141
YA S CL+E+VKI+ECK D+ V PIFY+V+PS VRHQ NSY A + + R
Sbjct: 495 YADSSWCLEEVVKILECKQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKQETRYGKDSE 316
Query: 142 VMQRWKKALLEAADLSGYH 160
+++W+ +L + DL +H
Sbjct: 315 KVKKWRSSLSQVCDLKAFH 259
>AV778571
Length = 452
Score = 70.9 bits (172), Expect = 1e-12
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = +3
Query: 732 AIQELPSSLNHLVGLEELSLKFCSKLESIPSSIGTLTKLCKLDLTYCESLETFPGSIFDL 791
+I ++P L+ L LE+LS + L I S+G L KL LD+ C + TFP +
Sbjct: 51 SITQIPD-LSGLPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFP----PM 215
Query: 792 KLTKLD---LNDCSRLKTFPAILEPAESFAHISLAETAIKKLPSSLQNLVGLQTLCLKEC 848
KL L+ L+ CS L++FP IL E+ I + T IK+LPSS+ NL L+ L L C
Sbjct: 216 KLASLEELYLSHCSSLESFPEILAKMENITLIGVYHTPIKELPSSIGNLTRLRRLELHGC 395
Query: 849 PDLESLPNSICNLKLLSEL 867
L+ LP+ + L EL
Sbjct: 396 GMLQ-LPSGMAM*TELEEL 449
Score = 70.9 bits (172), Expect = 1e-12
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Frame = +3
Query: 649 LPNLERLDLSNSWKLVRIPDLSKSPNIKEII-LSGCKSLTRLPINLFKLKFLERLNLSGC 707
LPNLE+L S L++I + N I+ + GC + P KL LE L LS C
Sbjct: 81 LPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFPP--MKLASLEELYLSHC 254
Query: 708 SNVENIPEIKETMENLAVLVLKQTAIQELPSSLNHLVGLEELSLKFCSKLESIPSSIGTL 767
S++E+ PEI MEN+ ++ + T I+ELPSS+ +L L L L C L+ +PS +
Sbjct: 255 SSLESFPEILAKMENITLIGVYHTPIKELPSSIGNLTRLRRLELHGCGMLQ-LPSGMAM* 431
Query: 768 TKLCKL 773
T+L +L
Sbjct: 432 TELEEL 449
Score = 35.8 bits (81), Expect = 0.040
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +3
Query: 845 LKECPDLESLPNSICNLKLLSELDCSGCRKLTGIPNDIGCLSSLRTLSLQDTGVVNLPES 904
+ + PDL LPN L +L L I +G L+ LR L ++ +
Sbjct: 54 ITQIPDLSGLPN-------LEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFPP 212
Query: 905 IAHLSSLESLDVSYCRKLECIPHLPPFMKQLL---AFHCP 941
+ L+SLE L +S+C LE P + M+ + +H P
Sbjct: 213 MK-LASLEELYLSHCSSLESFPEILAKMENITLIGVYHTP 329
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 63.9 bits (154), Expect = 1e-10
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Frame = +2
Query: 224 KSTLAEALYH--KLGTQFSSRCLIVNAQQKIDRYGIYSLRKKYLSKLLGEDIQSNGLNYA 281
K+TLA + ++ F R L + Q + + LR K ++G + NYA
Sbjct: 2 KTTLAREVCRDDQVRCHFKERILFLTVSQSPN---VEELRAKIFGHIMGN--RGLNANYA 166
Query: 282 I-------ERVKRAKVLLILDDLKISIPILELIGGHGNFGQGSRIIVTSRHRHVLKNAEA 334
+ E ++++L++LDD+ S+P+LE + G + +V SR +
Sbjct: 167 VPQWMPQFECQSQSQILVVLDDVW-SLPVLEQLVLRV---PGCKYLVVSRFKF---QRIF 325
Query: 335 DEIYEVQGMSYQDSLELFRLNAF-KEDYPLEGYANLIVEVLKYAKGVPLALQVLGSLLYD 393
++ Y+V+ +S D+L LF +AF + P NLI +V+ +PLAL+V+G+ L D
Sbjct: 326 NDTYDVELLSEGDALSLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKVIGASLRD 505
Query: 394 KEREVWESELKKLK------ELPNVDIFDVLKLSYDGLDDEPKDIFLDITCF 439
+ W S +L E V++ D + +S + L ++ K+ FLD+ F
Sbjct: 506 QNEMFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAF 661
>AW719637
Length = 571
Score = 60.1 bits (144), Expect = 2e-09
Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Frame = +2
Query: 735 ELPSSLNHLVGLEELSLKFCSKLESIPSSIGTLTKLCKLDLTYCESLETFPGSIFDLK-L 793
E+P + L L+ LSL +IPS+IG L+ L L L P SI L+ L
Sbjct: 11 EIPEEICSLSNLQSLSLHTNFLEGNIPSNIGNLSSLVNLTLFDNHLSGEIPKSIGSLRNL 190
Query: 794 TKLDLNDCSRLK-TFPAILEPAESFAHISLAETAIK-KLPSSLQNLVGLQTLCLKECPDL 851
LK P + S + LAET+I LPSS+Q L ++T+ +
Sbjct: 191 QVFRAGGNKNLKGEIPWEIGNCTSLVMLGLAETSISGSLPSSIQLLKRIKTIAIYTTLLS 370
Query: 852 ESLPNSICNLKLLSELDCSGCRKLTGIPNDIGCLSSLRTLSLQDTGVV-NLPESIAHLSS 910
S+P I N L L IP+ IG LS L++L L +V +PE I +
Sbjct: 371 GSIPEEIGNCSELQNLYLYQNSISGSIPSQIGELSKLKSLLLWQNNIVGTIPEEIGRCTE 550
Query: 911 LESLDVS 917
+E +D+S
Sbjct: 551 MEVIDLS 571
>TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodulation
aberrant root formation protein), complete
Length = 3308
Score = 59.7 bits (143), Expect = 3e-09
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 8/214 (3%)
Frame = +2
Query: 721 ENLAVLVLKQTAIQ---ELPSSLNHLVGLEELSLKFCSKLESIPSSIGTLTKLCKLDLTY 777
+NL V+ L T + LP + L LE L++ + + +PS + +LT L L++++
Sbjct: 323 QNLRVVALNVTLVPLFGHLPPEIGLLEKLENLTISMNNLTDQLPSDLASLTSLKVLNISH 502
Query: 778 CESLETFPGSIF--DLKLTKLDLNDCSRLKTFPAILEPAESFAHISLAETAIK-KLPSSL 834
FPG+I +L LD D S P + E ++ LA +P S
Sbjct: 503 NLFSGQFPGNITVGMTELEALDAYDNSFSGPLPEEIVKLEKLKYLHLAGNYFSGTIPESY 682
Query: 835 QNLVGLQTLCLKECPDLESLPNSICNLKLLSELDCSGCRKLT-GIPNDIGCLSSLRTLSL 893
L+ L L +P S+ LK L EL GIP G + +LR L +
Sbjct: 683 SEFQSLEFLGLNANSLTGRVPESLAKLKTLKELHLGYSNAYEGGIPPAFGSMENLRLLEM 862
Query: 894 QDTGVV-NLPESIAHLSSLESLDVSYCRKLECIP 926
+ + +P S+ +L+ L SL V IP
Sbjct: 863 ANCNLTGEIPPSLGNLTKLHSLFVQMNNLTGTIP 964
Score = 49.7 bits (117), Expect = 3e-06
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Frame = +2
Query: 648 ELPNLERLDLSNSWKLVRIPDLSKSPNIKEIILSGCKSLT-RLPINLFKLKFLERLNLSG 706
+L L+ L L+ ++ IP+ E + SLT R+P +L KLK L+ L+L
Sbjct: 614 KLEKLKYLHLAGNYFSGTIPESYSEFQSLEFLGLNANSLTGRVPESLAKLKTLKELHLGY 793
Query: 707 CSNVEN-IPEIKETMENLAVLVLKQTAIQ-ELPSSLNHLVGLEELSLKFCSKLESIPSSI 764
+ E IP +MENL +L + + E+P SL +L L L ++ + +IP +
Sbjct: 794 SNAYEGGIPPAFGSMENLRLLEMANCNLTGEIPPSLGNLTKLHSLFVQMNNLTGTIPPEL 973
Query: 765 GTLTKLCKLDLTYCESLETFPGSIFDLK 792
++ L LDL+ + P S LK
Sbjct: 974 SSMMSLMSLDLSINDLTGEIPESFSKLK 1057
Score = 37.0 bits (84), Expect = 0.018
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Frame = +2
Query: 648 ELPNLERLDLSNSWKLVRIPDLSKSPNIKEIILSGCKSLTRLPINLFKLKFLERLNLSGC 707
+LP++ +LSN+ +P + ++ + LS ++P + L+ L+ L+L
Sbjct: 1409 QLPSVTITELSNNRLNGELPSVISGESLGTLTLSNNLFTGKIPAAMKNLRALQSLSLDAN 1588
Query: 708 SNVENIP-EIKETMENLAVLVLKQTAIQELPSSLNHLVGLEELSLKFCSKLESIPSSIGT 766
+ IP + E V + +P+++ H L + L + +P +
Sbjct: 1589 EFIGEIPGGVFEIPMLTKVNISGNNLTGPIPTTITHRASLTAVDLSRNNLAGEVPKGMKN 1768
Query: 767 LTKLCKLDLTYCESLETFPGSI-FDLKLTKLDLNDCSRLKTFP 808
L L L+L+ E P I F LT LDL+ + T P
Sbjct: 1769 LMDLSILNLSRNEISGPVPDEIRFMTSLTTLDLSSNNFTGTVP 1897
>AI967395
Length = 205
Score = 57.0 bits (136), Expect = 2e-08
Identities = 25/61 (40%), Positives = 41/61 (66%)
Frame = +3
Query: 69 IEASTIYVIVFSENYASSRCCLDELVKIMECKMNYDRAVIPIFYRVDPSTVRHQTNSYGD 128
I+ S + ++VFSE+YA S CL+ELV I++ + ++ V P++Y V+ +RHQ YG+
Sbjct: 3 IQESRLIIVVFSEHYAVSASCLNELVNIVDVMIMNNQLVWPVYYGVEAPEIRHQRGRYGE 182
Query: 129 A 129
A
Sbjct: 183 A 185
>BP062551
Length = 389
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 22/39 (56%), Positives = 25/39 (63%)
Frame = +1
Query: 4 SSSSSSAAAAAMAPPPNPLKYDVFLSFSGEDTGKTFTSH 42
S SSSS+AA PPP P KY+ F+S G DT K FT H
Sbjct: 100 SGSSSSSAAVMAPPPPPPAKYEGFMSV*GVDTHKNFTGH 216
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 51 NVFIDDRSLETGDE 64
N FIDDRSLETGDE
Sbjct: 218 NAFIDDRSLETGDE 259
>TC10550 weakly similar to UP|Q40392 (Q40392) Virus resistance (N), partial
(5%)
Length = 670
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/98 (30%), Positives = 50/98 (50%)
Frame = +3
Query: 875 LTGIPNDIGCLSSLRTLSLQDTGVVNLPESIAHLSSLESLDVSYCRKLECIPHLPPFMKQ 934
+ +P+ G L L L+ + +LP I +L+ L L++S C KL+ +P LPP ++
Sbjct: 48 IKALPSSFGSQRKLEILDLEQGRIESLPSCIVNLTRLRYLNLSDCEKLQTLPELPPSVET 227
Query: 935 LLAFHCPSIRSVMSNSRFLSDSKEGTFELYFTNNEKQD 972
LL C S+++V+ S S+E + F E D
Sbjct: 228 LLTRGCSSLKTVLFPSTATEQSQENQKRVEFFQCESLD 341
Score = 50.4 bits (119), Expect = 2e-06
Identities = 38/93 (40%), Positives = 50/93 (52%), Gaps = 2/93 (2%)
Frame = +3
Query: 719 TMENLAVLVLKQTAIQELPSSLNHLVGLEELSLKFCSKLESIPSSIGTLTKLCKLDLTYC 778
T EN+ L L T I+ LPSS LE L L+ ++ES+PS I LT+L L+L+ C
Sbjct: 6 TSENMIELNLSDTGIKALPSSFGSQRKLEILDLE-QGRIESLPSCIVNLTRLRYLNLSDC 182
Query: 779 ESLETFPGSIFDLKLTKLDLNDCSRLKT--FPA 809
E L+T P + L CS LKT FP+
Sbjct: 183 EKLQTLPE--LPPSVETLLTRGCSSLKTVLFPS 275
Score = 45.4 bits (106), Expect = 5e-05
Identities = 34/112 (30%), Positives = 53/112 (46%), Gaps = 2/112 (1%)
Frame = +3
Query: 814 AESFAHISLAETAIKKLPSSLQNLVGLQTLCLKECPDLESLPNSICNLKLLSELDCSGCR 873
+E+ ++L++T IK LPSS + L+ L L++ +ESLP+ I NL L L+ S C
Sbjct: 9 SENMIELNLSDTGIKALPSSFGSQRKLEILDLEQ-GRIESLPSCIVNLTRLRYLNLSDCE 185
Query: 874 KLTGIPNDIGCLSSLRTLSLQDTGVVNLPESIAHLSSLESLDVSY--CRKLE 923
KL +P + +L T V P + S V + C L+
Sbjct: 186 KLQTLPELPPSVETLLTRGCSSLKTVLFPSTATEQSQENQKRVEFFQCESLD 341
Score = 38.1 bits (87), Expect = 0.008
Identities = 28/88 (31%), Positives = 46/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 702 LNLSGCSNVENIPEIKETMENLAVLVLKQTAIQELPSSLNHLVGLEELSLKFCSKLESIP 761
LNLS + ++ +P + L +L L+Q I+ LPS + +L L L+L C KL+++P
Sbjct: 27 LNLSD-TGIKALPSSFGSQRKLEILDLEQGRIESLPSCIVNLTRLRYLNLSDCEKLQTLP 203
Query: 762 SSIGTLTKLCKLDLTYCESLET--FPGS 787
++ L C SL+T FP +
Sbjct: 204 ELPPSVETLLTRG---CSSLKTVLFPST 278
Score = 36.2 bits (82), Expect = 0.031
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +3
Query: 793 LTKLDLNDCSRLKTFPAILEPAESFAHISLAETAIKKLPSSLQNLVGLQTLCLKECPDLE 852
+ +L+L+D +K P+ + L + I+ LPS + NL L+ L L +C L+
Sbjct: 18 MIELNLSDTG-IKALPSSFGSQRKLEILDLEQGRIESLPSCIVNLTRLRYLNLSDCEKLQ 194
Query: 853 SLPNSICNLKLLSELDCSGCR 873
+LP +++ L CS +
Sbjct: 195 TLPELPPSVETLLTRGCSSLK 257
Score = 30.0 bits (66), Expect = 2.2
Identities = 21/73 (28%), Positives = 36/73 (48%)
Frame = +3
Query: 651 NLERLDLSNSWKLVRIPDLSKSPNIKEIILSGCKSLTRLPINLFKLKFLERLNLSGCSNV 710
N+ L+LS++ + +P S EI+ + LP + L L LNLS C +
Sbjct: 15 NMIELNLSDTG-IKALPSSFGSQRKLEILDLEQGRIESLPSCIVNLTRLRYLNLSDCEKL 191
Query: 711 ENIPEIKETMENL 723
+ +PE+ ++E L
Sbjct: 192 QTLPELPPSVETL 230
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.139 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,418,254
Number of Sequences: 28460
Number of extensions: 322859
Number of successful extensions: 1956
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of query: 1156
length of database: 4,897,600
effective HSP length: 100
effective length of query: 1056
effective length of database: 2,051,600
effective search space: 2166489600
effective search space used: 2166489600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0073.8