TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0052a.1
         (387 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP053577                                                              212  1e-55
BP032481                                                               97  2e-38
CB826728                                                               98  2e-25
BP080049                                                               92  1e-19
TC17368                                                                59  1e-18
AV426428                                                               83  9e-17
AV780250                                                               80  6e-16
TC20198 similar to UP|Q9ZPU0 (Q9ZPU0) At2g13980 protein, partial...    78  2e-15
BP075797                                                               70  5e-13
CB827358                                                               70  6e-13
TC10764                                                                65  3e-12
BP071404                                                               66  9e-12
AV768060                                                               66  9e-12
TC13259                                                                66  1e-11
AV411435                                                               64  3e-11
TC11350 similar to UP|Q9LJP7 (Q9LJP7) Genomic DNA, chromosome 3,...    64  4e-11
CN825238                                                               60  5e-10
TC9793                                                                 60  5e-10
AV780729                                                               55  2e-08
BP046915                                                               51  3e-07

>BP053577 
          Length = 463

 Score =  212 bits (539), Expect = 1e-55
 Identities = 104/138 (75%), Positives = 117/138 (84%)
 Frame = +3

Query: 250 GGTAGLGMVARNSEGEAMAAACSFPVPISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDC 309
           GG AGLGMVARN +GE MA+ACS PV ISSPLLAEA+ +RWTMQLA DLGF  I LETDC
Sbjct: 3   GGIAGLGMVARNCDGEVMASACSSPVSISSPLLAEALGLRWTMQLATDLGFRRITLETDC 182

Query: 310 LNLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSLCFVRRTGNAVADFLARNANTYANM 369
           L LFN WR+ EE RSYLS +I DCR+LISAF++VS+ FVRRTGN VADFLARN++TYANM
Sbjct: 183 LQLFNTWRSQEEGRSYLSSIISDCRILISAFDYVSVSFVRRTGNTVADFLARNSDTYANM 362

Query: 370 VWVEEVPLAVLPLFDADV 387
           VWVEEVPL V+ L DADV
Sbjct: 363 VWVEEVPLTVVSLIDADV 416


>BP032481 
          Length = 447

 Score = 97.1 bits (240), Expect(3) = 2e-38
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = -1

Query: 311 NLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSLCFVRRTGNAVADFLARNANTYANMV 370
           NLF +W+  E + SYLS +++DCRLL +AF+ VSL FVRRTGN VA F ARNA TYAN+V
Sbjct: 261 NLFKSWKAKEVE*SYLSSILQDCRLLFTAFDVVSLSFVRRTGNTVAGFFARNAETYANLV 82

Query: 371 WVEEVPLAVLP 381
           W EEVP+A  P
Sbjct: 81  WPEEVPVAAFP 49



 Score = 54.7 bits (130), Expect(3) = 2e-38
 Identities = 26/31 (83%), Positives = 27/31 (86%)
 Frame = -2

Query: 280 PLLAEAMAMRWTMQLAIDLGFH*IVLETDCL 310
           PLLAEAM+MRW MQLAIDLGF  I LETDCL
Sbjct: 353 PLLAEAMSMRWIMQLAIDLGFRRICLETDCL 261



 Score = 44.7 bits (104), Expect(3) = 2e-38
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 250 GGTAGLGMVARNSEGEAMAAACSFPV 275
           GG  G+GMVARNSEG+ MA  CSFP+
Sbjct: 442 GGLGGMGMVARNSEGDVMATTCSFPI 365


>CB826728 
          Length = 509

 Score = 98.2 bits (243), Expect(2) = 2e-25
 Identities = 46/101 (45%), Positives = 60/101 (58%)
 Frame = +1

Query: 37  ILFWPESSNGHYTSKAGYVFLRKLASIEAPSSSTAVGFSPRFWKGFWATSALPRCKETCW 96
           + FWP SS+G Y+SK+GY F+R       PS+S A       WK  W+ S+LPRCKE  W
Sbjct: 205 VFFWPGSSDGWYSSKSGYEFIRLENKSLLPSTSPAAAVPSLIWKTVWSASSLPRCKEVMW 384

Query: 97  RAISGYLPLRDRLFRRHVDVDPGCCLCSGENETAEHLFMLC 137
           RA +GYLP+R  L RR +DVDP       E+E   H+ + C
Sbjct: 385 RACAGYLPVRSALKRRGLDVDPSSPWSGLEDEAEVHVLLTC 507



 Score = 34.3 bits (77), Expect(2) = 2e-25
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 7   WRRDLIEFVFSPSTAEIILSIPLSLNGGRDILF 39
           W  +L+  VFSPST  + L++ L L    D LF
Sbjct: 114 WNENLVSMVFSPSTTAVFLAVSLPLQSYEDCLF 212


>BP080049 
          Length = 356

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 49/102 (48%), Positives = 64/102 (62%)
 Frame = -1

Query: 286 MAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSL 345
           +++RW + LA +LGF *IV ETDCL+L+ AW+      S L  LI DCR L+S F+   L
Sbjct: 356 LSLRWALGLASELGFR*IVFETDCLHLYEAWKR-RGGCSVLDTLILDCRNLLSYFDVFQL 180

Query: 346 CFVRRTGNAVADFLARNANTYANMVWVEEVPLAVLPLFDADV 387
            FVRRT N V D LA+      N+VWVEE+P  +  L  +DV
Sbjct: 179 SFVRRTSNCVVDALAKLCFQLGNVVWVEELPHELYGLVQSDV 54


>TC17368 
          Length = 563

 Score = 58.5 bits (140), Expect(2) = 1e-18
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +1

Query: 231 WRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAAACSFPVPISSPLLAEAMA 287
           W+ P  G+I  NF ASF+ G  AG G++ARN  G+ +A A +  V +SSP++A+A A
Sbjct: 55  WKPPAQGSINVNFGASFKAGVGAGFGLIARNGSGQVLAIATNLIVDVSSPVVAQAYA 225



 Score = 50.8 bits (120), Expect(2) = 1e-18
 Identities = 26/68 (38%), Positives = 37/68 (54%)
 Frame = +3

Query: 289 RWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSLCFV 348
           RW ++L +DLGF  ++ E DC  L  AW +      YLS +++D   L   F   S  +V
Sbjct: 231 RWAIELTMDLGFSGVIFENDC*VLHCAWISKLNSPPYLSFIVQDYWFLSFGFNSCSFVYV 410

Query: 349 RRTGNAVA 356
           +R  NAVA
Sbjct: 411 KRQCNAVA 434


>AV426428 
          Length = 413

 Score = 82.8 bits (203), Expect = 9e-17
 Identities = 43/119 (36%), Positives = 64/119 (53%)
 Frame = +3

Query: 83  WATSALPRCKETCWRAISGYLPLRDRLFRRHVDVDPGCCLCSGENETAEHLFMLCPAAKQ 142
           W   ALPRC ET WRA  G LP++  L  R +  DP C  C    +TA+H  + CP    
Sbjct: 57  WKAEALPRCCETGWRACLGVLPVKASLHARGLAEDPICPRCLAAPKTADHAVLFCP*VHP 236

Query: 143 V*YASSLSLRVDSFIAFADFWAWVVEQGDSEFISTVQTIIYAIWEARNQVQFQQRTFSV 201
           + +ASSL  R++      +F A  ++  D +      TI+YAIW A+N++ F+  T ++
Sbjct: 237 IWFASSLGFRLNQECKMHEFVADFMQVAD*DTCGEFLTILYAIWTAQNELCFRYTTVTL 413


>AV780250 
          Length = 494

 Score = 80.1 bits (196), Expect = 6e-16
 Identities = 43/107 (40%), Positives = 54/107 (50%)
 Frame = +3

Query: 36  DILFWPESSNGHYTSKAGYVFLRKLASIEAPSSSTAVGFSPRFWKGFWATSALPRCKETC 95
           D+L WP +SNG YTSK+GY  +R       PSSSTA+  SP  WK       LPRC+E  
Sbjct: 174 DVLAWPHTSNGEYTSKSGYAVVRNKVVHALPSSSTALQVSPVVWK----APTLPRCRELI 341

Query: 96  WRAISGYLPLRDRLFRRHVDVDPGCCLCSGENETAEHLFMLCPAAKQ 142
            RA    LP R  L  R +DVD  C  C    E+   + +  P   +
Sbjct: 342 GRAFLKILPTRSALRARGMDVDELCPSCETHRESPAQVLLFVPVVSK 482


>TC20198 similar to UP|Q9ZPU0 (Q9ZPU0) At2g13980 protein, partial (13%)
          Length = 630

 Score = 78.2 bits (191), Expect = 2e-15
 Identities = 51/157 (32%), Positives = 77/157 (48%), Gaps = 2/157 (1%)
 Frame = +3

Query: 231 WRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAAACSFPVPISSPLLAEAMAMRW 290
           W  P  G  K NFD S      AGL +V R+  G  + +       I + +   ++  R 
Sbjct: 93  WPPPPDGVFKLNFDTSVLASS*AGLSLVVRDCAG*EVFS-------IQN*VFGASLISRD 251

Query: 291 --TMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSLCFV 348
             +  + +DL    ++L+TDC NLF  W+      SY  +  R   LL + F FV L FV
Sbjct: 252 G*SYSVLVDLFLTSVILKTDCYNLFVQWKKKHVSASYFGVYCRTFFLLCACFSFVDLSFV 431

Query: 349 RRTGNAVADFLARNANTYANMVWVEEVPLAVLPLFDA 385
           RR GN VA+ LA+ A +    VW+E+ P+ ++ L  +
Sbjct: 432 RR-GNKVANDLAKLAFSSHGYVWIEDSPIGLVALLSS 539


>BP075797 
          Length = 504

 Score = 70.5 bits (171), Expect = 5e-13
 Identities = 46/126 (36%), Positives = 65/126 (51%)
 Frame = -2

Query: 261 NSEGEAMAAACSFPVPISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIE 320
           N EG+A+ A+    +    P +AEA+++R T+ L  D  F  I LE+DCL L +AW    
Sbjct: 464 NHEGKAIIASSFHLLVAYEPAIAEALSLRRTITLPQDENFRIIELESDCLQLVHAWDRSV 285

Query: 321 EDRSYLSILIRDCRLLISAFEFVSLCFVRRTGNAVADFLARNANTYANMVWVEEVPLAVL 380
               YL+ +++DC+ L S  +  SL    R  N VAD LA+ A  Y +  WV   P A  
Sbjct: 284 PHPHYLASIVQDCKDLSSFSDSCSLKHSSRKINEVADHLAKLAFVYQDHFWVGIDPPATS 105

Query: 381 PLFDAD 386
            L   D
Sbjct: 104 LLLQPD 87


>CB827358 
          Length = 453

 Score = 70.1 bits (170), Expect = 6e-13
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
 Frame = +2

Query: 169 QGDSEFISTVQTIIYAIWEARNQVQFQQRTFSVTGVLRRVAAMN----SASQKSDGGPQT 224
           + DS+ +++ Q    A+WEA N++ FQ+  F     ++R  +M+    S    S  GP  
Sbjct: 146 EADSDVVASCQMASCALWEAHNKLIFQEVPFRCEAAIQRATSMSQVDVSTVDPSANGPV- 322

Query: 225 GSRPARWRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAA 269
               A WRRP  G  K NFD S++    +G+GMVARN +G  +AA
Sbjct: 323 --HDAIWRRPPRGVFKVNFDGSWKSDSVSGIGMVARNHDGLILAA 451



 Score = 35.4 bits (80), Expect = 0.016
 Identities = 18/42 (42%), Positives = 23/42 (53%)
 Frame = +3

Query: 85  TSALPRCKETCWRAISGYLPLRDRLFRRHVDVDPGCCLCSGE 126
           T ALPRCK+  W      +  R  L+R+ V+ DP C LC  E
Sbjct: 3   TKALPRCKDLAW-----CVCCR*SLWRKGVNSDPSCPLCGNE 113


>TC10764 
          Length = 555

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 42/126 (33%), Positives = 58/126 (45%), Gaps = 2/126 (1%)
 Frame = +1

Query: 225 GSRPAR--WRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAAACSFPVPISSPLL 282
           GS+PA   W  P        FD S       G G++A + EGE +AA  +FP+ +  PL+
Sbjct: 34  GSKPATFGWENPN*------FDVSVVEHLDVGFGLLAGDHEGEVLAATSAFPLSVLPPLI 195

Query: 283 AEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISAFEF 342
           AEA    W +   +   F     E   L L+  W       SY+  L+ DCRLL   F+F
Sbjct: 196 AEAFC--WALSSDMTSCFGSFCFEIGYLQLYETWMKT*PGSSYVCTLVNDCRLLACYFDF 369

Query: 343 VSLCFV 348
           +   FV
Sbjct: 370 IEPSFV 387



 Score = 22.3 bits (46), Expect(2) = 3e-12
 Identities = 9/19 (47%), Positives = 12/19 (62%)
 Frame = +3

Query: 366 YANMVWVEEVPLAVLPLFD 384
           + N+VW+EEV L  L   D
Sbjct: 447 FQNLVWIEEVRLHPLTRHD 503


>BP071404 
          Length = 394

 Score = 66.2 bits (160), Expect = 9e-12
 Identities = 33/76 (43%), Positives = 44/76 (57%)
 Frame = -2

Query: 267 MAAACSFPVPISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYL 326
           + AA  +  P   PL+AEA  M+W+M+L   LGF  +VLETDCL L   W      +SY 
Sbjct: 387 LVAASYYAGPSLDPLVAEAACMKWSMELCRMLGFQSLVLETDCLLLHQIWTARTLPKSYA 208

Query: 327 SILIRDCRLLISAFEF 342
             ++ DCR+L S F F
Sbjct: 207 GSIMEDCRMLASGFLF 160


>AV768060 
          Length = 416

 Score = 66.2 bits (160), Expect = 9e-12
 Identities = 36/101 (35%), Positives = 53/101 (51%)
 Frame = -3

Query: 280 PLLAEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISA 339
           PL+AEAM  RW + LA + G   +V  +DC  L  A+    E  S   I++ DC  L+++
Sbjct: 300 PLIAEAMCFRWALNLAANWGLDSLVFSSDCQQLVKAFHCPSEFPSLAHIML-DCTQLVNS 124

Query: 340 FEFVSLCFVRRTGNAVADFLARNANTYANMVWVEEVPLAVL 380
           F   S CF  R  N VA  LA  ++ Y +  W  + P+ +L
Sbjct: 123 FRNFSFCFEYRQTNRVAHALAAESHLYKDCEWWGDPPVGIL 1


>TC13259 
          Length = 506

 Score = 65.9 bits (159), Expect = 1e-11
 Identities = 39/112 (34%), Positives = 63/112 (55%)
 Frame = +1

Query: 265 EAMAAACSFPVPISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRS 324
           + +A A S      S   +EAMA+RW +QL+++LGF  + +E D   + N+W+  ++  S
Sbjct: 55  QVLATASSKWPRTVSVATSEAMALRWGLQLSLELGFFEVEVEIDNQVVVNSWKGTKKHVS 234

Query: 325 YLSILIRDCRLLISAFEFVSLCFVRRTGNAVADFLARNANTYANMVWVEEVP 376
           YL+ +I D   +   F F SL +V R  +  AD+LA+ A +    V +EE P
Sbjct: 235 YLANVIADVVRISQCFRFFSLAYVPRLSHLAADYLAQFALSDYCFVGIEEHP 390


>AV411435 
          Length = 426

 Score = 64.3 bits (155), Expect = 3e-11
 Identities = 37/142 (26%), Positives = 62/142 (43%)
 Frame = +3

Query: 24  ILSIPLSLNGGRDILFWPESSNGHYTSKAGYVFLRKLASIEAPSSSTAVGFSPRFWKGFW 83
           I+  P S+ G  D LFWP   +G Y+ K+GY  ++      +  +S++   S   W   W
Sbjct: 3   IMQTPFSITGSEDRLFWPFIPSGEYSVKSGYRAVKATQFNLSNLASSSSHPSSFLWHTIW 182

Query: 84  ATSALPRCKETCWRAISGYLPLRDRLFRRHVDVDPGCCLCSGENETAEHLFMLCPAAKQV 143
                 + +   WRA +  +P++  L RR++  D  C +C+   E   H  + C   + V
Sbjct: 183 GAQVPKKVRSFLWRAANNAIPVKRNLKRRNMGRDDFCPICNKGPEDINHALLACEWTRAV 362

Query: 144 *YASSLSLRVDSFIAFADFWAW 165
            +   L+  V        F AW
Sbjct: 363 WFGCPLNFVVHEVHGML-FGAW 425


>TC11350 similar to UP|Q9LJP7 (Q9LJP7) Genomic DNA, chromosome 3, P1 clone:
            MIG10, partial (18%)
          Length = 1118

 Score = 63.9 bits (154), Expect = 4e-11
 Identities = 52/179 (29%), Positives = 86/179 (47%), Gaps = 22/179 (12%)
 Frame = -3

Query: 162  FWAWVVEQGD---------SEFISTVQTIIYAIWEARNQVQFQQRTFSVTGVLRRVAAMN 212
            F  W VE+            E ++T+   ++AIW+ RN+V FQ    +    + ++  M 
Sbjct: 1065 FDRWFVERSQFILNHSLNHEEDLATLSFTLWAIWKNRNRVIFQLEEPNPVNTIFQIRHMQ 886

Query: 213  ------SASQKSDGGPQ------TGSRPARWRRPQPGTIKCNFDASFRGGG-TAGLGMVA 259
                  S SQ +    +      T +R   WR P  G  K N DAS++    +  +G+V 
Sbjct: 885  QDANLMSTSQSNKQTTRERNINVTSARDRSWRPPPLGVYKLNSDASWKAPSPSCTVGVVI 706

Query: 260  RNSEGEAMAAACSFPVPISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDCLNLFNAWRT 318
            R++ G  ++   S P+   SP+++EA+A+R  + LA  LG   I+ E+DC  L  A R+
Sbjct: 705  RDNLGLLISGTASRPLA-PSPIVSEALALREGLILARSLGLDRILSESDCQPLIEACRS 532


>CN825238 
          Length = 692

 Score = 60.5 bits (145), Expect = 5e-10
 Identities = 39/128 (30%), Positives = 59/128 (45%), Gaps = 1/128 (0%)
 Frame = +3

Query: 7   WRRDLIEFVFSPSTAEIILSIPLSLNGGRDILFWPESSNGHYTSKAGYVFLRKLASIEAP 66
           W   LI+ +F   TA +I SIPL     R+   W  S NG ++ ++ Y  ++    ++  
Sbjct: 321 WNVQLIDQLFPKETAAVIKSIPLGWRTTRNSCLWRWSRNGAFSVRSAYYNIQVAKEMQT- 497

Query: 67  SSSTAVGFSPRFWKGFWATSALPRCKETCWRAISGYLPLRDRLFRRHVDVDPGCCLCSGE 126
           SSS A  F    WK  W T    + K   +R     +P R+ L RR + V   C  C+ +
Sbjct: 498 SSSAASSFP---WKKLWRTPVPNKMKHFAYRVARNIIPCRENLQRRGIAVQNECPTCNHQ 668

Query: 127 -NETAEHL 133
             E+  HL
Sbjct: 669 IPESMSHL 692


>TC9793 
          Length = 568

 Score = 60.5 bits (145), Expect = 5e-10
 Identities = 34/120 (28%), Positives = 58/120 (48%)
 Frame = +2

Query: 231 WRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAAACSFPVPISSPLLAEAMAMRW 290
           W  P  G IK N DA + G  + G  +VAR+     + AA         P LAEA+A+RW
Sbjct: 62  WEPPPEGIIKVNIDAGWSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALRW 241

Query: 291 TMQLAIDLGFH*IVLETDCLNLFNAWRTIEEDRSYLSILIRDCRLLISAFEFVSLCFVRR 350
            + +  ++    I++E+  L + N     +  R  + +++ D R L + F F++   + R
Sbjct: 242 CLSMIKEMEMERIIVESYSLVVLNTLHQ-KTKRPDIELVVYDSRELAAEFNFINFKHIGR 418


>AV780729 
          Length = 475

 Score = 55.5 bits (132), Expect = 2e-08
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 156 FIAFADFWAWVVEQGDSEFISTVQTIIYAIWEARNQVQFQQRTFSVTG---VLRRVAAMN 212
           F +  +FW  ++  GD++ I     I+     ++ Q Q   + F   G    L +VAA  
Sbjct: 39  FSS*TEFWVAMIHDGDADLIGADTDIVLHFMRSKEQRQV*AQGFLSFGSGAALTKVAA-T 215

Query: 213 SASQKSDGGPQTGSRPARWRRPQPGTIKCNFDASFRGGGTAGLGMVARNSEGEAMAAACS 272
           SA   +     T        +  P  +   F     G  +   GMVARN E E +A+  +
Sbjct: 216 SARGLA*TESLTHGSARDVEKAYPRCVHG*F*CYI*GWKSFRYGMVARNYECEILASVTA 395

Query: 273 FPVPISSPLLAEAMAMRWTMQLAIDL 298
           +PV   SPLLAEA   RW ++LA++L
Sbjct: 396 YPVTSLSPLLAEAGCFRWALRLAMEL 473


>BP046915 
          Length = 401

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
 Frame = -2

Query: 252 TAGLGMVARNSEGEAMAAACSFPV-PISSPLLAEAMAMRWTMQLAIDLGFH*IVLETDCL 310
           TA LGMVAR+S+G A+ A   F    +    LA+++ + W M LAIDLG   ++ +    
Sbjct: 364 TASLGMVARDSDGAALGAVACFQCRQLCLW*LAKSLGLCWAMSLAIDLGLINLLRDRLFA 185

Query: 311 NLFNAWRTIEEDR--SYLSILIRDCRLLISAFEFVSLCFVRRTGNAVADFLARNANTYAN 368
           N        +      + S ++ DC  ++  F +       R+G  VADFL  N   Y  
Sbjct: 184 NSSTLGNFFDPGSHWPWWSRIVIDCL*VLMLFLY---RLFXRSGTCVADFLTMNIFIYP* 14

Query: 369 MVWV 372
            VWV
Sbjct: 13  SVWV 2


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.327    0.138    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,696,487
Number of Sequences: 28460
Number of extensions: 112352
Number of successful extensions: 879
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of query: 387
length of database: 4,897,600
effective HSP length: 92
effective length of query: 295
effective length of database: 2,279,280
effective search space: 672387600
effective search space used: 672387600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)