BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0046b.1
(234 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8468 similar to UP|BRU1_SOYBN (P35694) Brassinosteroid-regulat... 287 1e-78
TC15965 homologue to UP|Q8S902 (Q8S902) Syringolide-induced prot... 285 6e-78
TC14367 similar to UP|Q9ZRV1 (Q9ZRV1) Xyloglucan endotransglycos... 278 4e-76
TC16208 similar to UP|Q8S902 (Q8S902) Syringolide-induced protei... 230 1e-61
TC14828 homologue to UP|O65734 (O65734) Endoxyloglucan transfera... 216 2e-57
TC14885 similar to UP|XTH8_ARATH (Q8L9A9) Probable xyloglucan en... 202 3e-53
TC14366 similar to UP|Q8GTJ0 (Q8GTJ0) Xyloglucan endotransglycos... 191 1e-49
TC9415 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan endotransglu... 163 2e-41
TC15551 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan endotransgl... 159 5e-40
TC9676 similar to PIR|S71223|S71223 xyloglucan endo-1,4-beta-D-g... 133 3e-32
TC16367 similar to UP|Q8W3L8 (Q8W3L8) Xyloglucan endo-transglyco... 120 2e-28
AV773075 118 8e-28
TC14368 similar to UP|Q9LLC2 (Q9LLC2) Xyloglucan endotransglycos... 112 7e-26
TC18347 similar to PIR|T04514|T04514 xyloglucan endo-1,4-beta-D-... 105 9e-24
TC19755 similar to UP|XT33_ARATH (Q8LC45) Probable xyloglucan en... 86 7e-18
TC11219 similar to UP|O23950 (O23950) Endo-xyloglucan transferas... 86 7e-18
TC9891 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan endotransglu... 84 2e-17
TC8123 similar to UP|Q9XHM8 (Q9XHM8) Xyloglucan endo-transglycos... 76 4e-15
TC9789 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan endotransglu... 75 7e-15
TC18022 similar to UP|Q9LLC2 (Q9LLC2) Xyloglucan endotransglycos... 67 2e-12
>TC8468 similar to UP|BRU1_SOYBN (P35694) Brassinosteroid-regulated protein
BRU1 precursor , partial (93%)
Length = 1023
Score = 287 bits (734), Expect = 1e-78
Identities = 135/174 (77%), Positives = 150/174 (85%)
Frame = +2
Query: 35 SGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEFLGNISGEPYI 94
SGS F+SK EYLFGR DMQLKLV+GNSAGTVTAYYLSS+GP HDEIDFEFLGN+SG+PYI
Sbjct: 188 SGSGFKSKREYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 367
Query: 95 VHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFNNYEGRGVP 154
+HTNV+TQG GNREQQFYLWFDPT+NFHTY+I+WK Q IIFLVDN+PIR+F N E GVP
Sbjct: 368 LHTNVFTQGRGNREQQFYLWFDPTRNFHTYSIIWKRQHIIFLVDNMPIRVFKNAESVGVP 547
Query: 155 FPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKGSS 208
FP QPMR+Y SLW AD WATRGGLVKT+WS APF AYYRNF KA+ GSS
Sbjct: 548 FPKNQPMRIYSSLWSADDWATRGGLVKTDWSKAPFTAYYRNF--KATSISTGSS 703
>TC15965 homologue to UP|Q8S902 (Q8S902) Syringolide-induced protein 19-1-5,
partial (86%)
Length = 1021
Score = 285 bits (728), Expect = 6e-78
Identities = 138/203 (67%), Positives = 162/203 (78%), Gaps = 3/203 (1%)
Frame = +3
Query: 28 TLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEFLGN 87
TL +SGS F+S+ EYLFG+ DMQLKLV GNSAGTVTAYYLSS+G N DEIDFEFLGN
Sbjct: 204 TLNLDKASGSGFQSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSKGSNWDEIDFEFLGN 383
Query: 88 ISGEPYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFNN 147
+SG+PYI+HTNV++QG GNREQQFYLWFDPT +FHTY+I+W PQRI+F VD PIR F N
Sbjct: 384 LSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKN 563
Query: 148 YEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASI---WC 204
E +GVPFP QPMR+Y SLW AD WATRGG+VKT+WS APF A YRNF+A +
Sbjct: 564 MESKGVPFPKDQPMRIYSSLWNADDWATRGGVVKTDWSQAPFTASYRNFNANNACVRSTG 743
Query: 205 KGSSSCNSNSATMSDNSWQAQDL 227
G+SSCNSNSA S N+W +Q+L
Sbjct: 744 SGTSSCNSNSA--SSNAWLSQEL 806
>TC14367 similar to UP|Q9ZRV1 (Q9ZRV1) Xyloglucan endotransglycosylase 1,
partial (96%)
Length = 1137
Score = 278 bits (712), Expect = 4e-76
Identities = 135/206 (65%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Frame = +3
Query: 25 SIKTLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEF 84
++ TL+ +SGS F SK EYLFG+ DMQ+KLV GNSAGTVTAYYLSS+G DEIDFEF
Sbjct: 237 NLLTLSLDKASGSGFESKNEYLFGKIDMQIKLVPGNSAGTVTAYYLSSKGSTWDEIDFEF 416
Query: 85 LGNISGEPYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRM 144
LGN+SG+PY +HTNV++QG GNREQQF+LWFDPT +FHTY+I+W PQRI+F VD PIR
Sbjct: 417 LGNLSGDPYTLHTNVFSQGKGNREQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIRE 596
Query: 145 FNNYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDA-KASIW 203
F N E GVPFP QPMRL SLW AD WATRGGLVKT+WS APF A YRNF+A A +W
Sbjct: 597 FKNLESAGVPFPKNQPMRLTSSLWNADDWATRGGLVKTDWSKAPFTASYRNFNANNACVW 776
Query: 204 CKGSSSCNSNSATMSDN--SWQAQDL 227
G SSC SNS + + SW Q+L
Sbjct: 777 SGGKSSCKSNSPSSASGSASWLKQEL 854
>TC16208 similar to UP|Q8S902 (Q8S902) Syringolide-induced protein 19-1-5,
partial (62%)
Length = 628
Score = 230 bits (587), Expect = 1e-61
Identities = 108/151 (71%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 TLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSS-EGPNHDEIDFEFLG 86
TL+ +SGS FRS+ EYLFG+ DMQLKLV GNSAGTVTAYYLSS + HDEIDFEFLG
Sbjct: 175 TLSLDKASGSGFRSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSADWDTHDEIDFEFLG 354
Query: 87 NISGEPYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFN 146
N+SG+PYI+HTNV+TQG GNREQQFYLWFDPTK+FHTY+++W PQ IIF VD PIR FN
Sbjct: 355 NLSGDPYILHTNVFTQGKGNREQQFYLWFDPTKDFHTYSVLWNPQSIIFSVDGTPIRQFN 534
Query: 147 NYEGRGVPFPSRQPMRLYPSLWCADQWATRG 177
N E +GV FP +Q MR++ SLW AD WATRG
Sbjct: 535 NLESKGVAFPKKQAMRIFSSLWNADDWATRG 627
>TC14828 homologue to UP|O65734 (O65734) Endoxyloglucan transferase, partial
(98%)
Length = 993
Score = 216 bits (551), Expect = 2e-57
Identities = 102/191 (53%), Positives = 132/191 (68%)
Frame = +2
Query: 35 SGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEFLGNISGEPYI 94
+G+ F+SK YLFG M +K+V G+SAGTVTA+YLSS+ HDEIDFEFLGN SG+PYI
Sbjct: 185 TGTGFQSKGSYLFGHFSMDIKMVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRSGQPYI 364
Query: 95 VHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFNNYEGRGVP 154
+ TNV+T G G++EQ+ +LWFDPTK FH Y+++W +I+F VD++PIR+F N + GV
Sbjct: 365 LQTNVFTGGKGDKEQRIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVR 544
Query: 155 FPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKGSSSCNSNS 214
FP QPM++Y SLW AD WATRGGL KT+WS APF A Y+ F +S N+
Sbjct: 545 FPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGC-----EASVNAKF 709
Query: 215 ATMSDNSWQAQ 225
SW Q
Sbjct: 710 CATQGKSWWDQ 742
>TC14885 similar to UP|XTH8_ARATH (Q8L9A9) Probable xyloglucan
endotransglucosylase/hydrolase protein 8 precursor
(At-XTH8) (XTH-8) , partial (93%)
Length = 1257
Score = 202 bits (515), Expect = 3e-53
Identities = 96/198 (48%), Positives = 129/198 (64%), Gaps = 6/198 (3%)
Frame = +3
Query: 35 SGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSE---GPNHDEIDFEFLGNISGE 91
+G F++K Y FG M+LKLV+G+SAG VTAYY+ SE GP DE+DFEFLGN +GE
Sbjct: 261 TGCGFQTKQRYRFGWFSMKLKLVAGDSAGVVTAYYMCSENGAGPERDELDFEFLGNRTGE 440
Query: 92 PYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFNNYEGR 151
PY++ TNVY G G+RE + LWFDPT+++HTY+++W +I+F VD +PIR+F N
Sbjct: 441 PYLIQTNVYKNGNGSREMRHVLWFDPTEDYHTYSVLWNNHQIVFFVDKVPIRVFKNNGKP 620
Query: 152 GVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKGSSSCN 211
FP+ +PM L+ S+W AD WATRGGL KTNW APF + Y++F A W +C
Sbjct: 621 NNFFPNEKPMFLFSSIWNADDWATRGGLEKTNWKLAPFVSSYKDFSVDACQWEDPFPACV 800
Query: 212 SNSATM---SDNSWQAQD 226
S + N+W D
Sbjct: 801 STTTKYWWDQYNAWHLSD 854
>TC14366 similar to UP|Q8GTJ0 (Q8GTJ0) Xyloglucan endotransglycosylase,
partial (55%)
Length = 558
Score = 191 bits (484), Expect = 1e-49
Identities = 89/129 (68%), Positives = 105/129 (80%)
Frame = +1
Query: 25 SIKTLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEF 84
++ TL+ +SGS FRSK EYLFG+ D++LKLV GNSAGTVT YYLSS G HDEIDFEF
Sbjct: 169 NLLTLSLDKASGSGFRSKNEYLFGKFDLKLKLVPGNSAGTVTTYYLSSLGSTHDEIDFEF 348
Query: 85 LGNISGEPYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRM 144
LGN+SG+PYI+HTNV+ QG GN+EQQFYLWFDPTK+FHTY+I+W PQ IIF VD PIR
Sbjct: 349 LGNLSGDPYILHTNVFAQGKGNKEQQFYLWFDPTKDFHTYSILWNPQSIIFSVDGTPIRE 528
Query: 145 FNNYEGRGV 153
F N +GV
Sbjct: 529 FKNLASKGV 555
>TC9415 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan
endotransglucosylase/hydrolase protein 9 precursor
(At-XTH9) (XTH-9) , partial (48%)
Length = 588
Score = 163 bits (413), Expect = 2e-41
Identities = 72/111 (64%), Positives = 91/111 (81%)
Frame = +1
Query: 34 SSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEFLGNISGEPY 93
SSG+ F SK +Y+FG+ +QLKLV G+SAGTVTA+Y+SSEG NH+E DFEFLGN +GEPY
Sbjct: 253 SSGAGFGSKNKYMFGKVSIQLKLVQGDSAGTVTAFYMSSEGVNHNEFDFEFLGNTTGEPY 432
Query: 94 IVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRM 144
V TNVY G+GNREQ+ LW+DPTK+FHTYTI W ++++FLVD PIR+
Sbjct: 433 SVQTNVYVNGVGNREQRLDLWYDPTKDFHTYTIFWNQRQVVFLVDETPIRV 585
>TC15551 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan
endotransglucosylase/hydrolase protein 9 precursor
(At-XTH9) (XTH-9) , partial (49%)
Length = 596
Score = 159 bits (401), Expect = 5e-40
Identities = 69/108 (63%), Positives = 86/108 (78%)
Frame = +3
Query: 35 SGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGPNHDEIDFEFLGNISGEPYI 94
SG+ F SK +Y+FGR + LKLV G+SAGTVTA+Y+SSEG NH+E DFEFLGN +GEPY
Sbjct: 273 SGAGFESKKKYMFGRVSLNLKLVEGDSAGTVTAFYMSSEGANHNEFDFEFLGNTTGEPYS 452
Query: 95 VHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPI 142
V TNVY G+GNREQ+ LWFDPTK FH+Y+I W ++++FLVD PI
Sbjct: 453 VQTNVYVNGVGNREQRLNLWFDPTKEFHSYSIFWNQRQVVFLVDETPI 596
>TC9676 similar to PIR|S71223|S71223 xyloglucan endo-1,4-beta-D-glucanase
XTR-4 - Arabidopsis thaliana (fragment)
{Arabidopsis thaliana;} , partial (51%)
Length = 716
Score = 133 bits (334), Expect = 3e-32
Identities = 68/149 (45%), Positives = 90/149 (59%), Gaps = 5/149 (3%)
Frame = +1
Query: 35 SGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEG---PNHDEIDFEFLGNISGE 91
+GS F S Y G +KL S SAG A+Y S+ HDE+DFEFLGNI+G+
Sbjct: 271 TGSGFVSSNMYQHGFFSANIKLPSNYSAGICVAFYTSNNEMFEKTHDELDFEFLGNIAGK 450
Query: 92 PYIVHTNVYTQGIGNR--EQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFNNYE 149
P+ TN+Y G NR E+++ LWFDPTK FH Y+I+W + IIF +D +PIR E
Sbjct: 451 PWRFQTNLYGNGSTNRGREERYRLWFDPTKGFHRYSILWTAKNIIFYIDEVPIREIIRSE 630
Query: 150 GRGVPFPSRQPMRLYPSLWCADQWATRGG 178
G +P++ PM LY ++W A WAT GG
Sbjct: 631 EMGADYPAK-PMALYATIWDASNWATSGG 714
>TC16367 similar to UP|Q8W3L8 (Q8W3L8) Xyloglucan endo-transglycosylase,
partial (54%)
Length = 1093
Score = 120 bits (301), Expect = 2e-28
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Frame = +1
Query: 92 PYIVHTNVYTQGIGN-----REQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMFN 146
PY++ TNVY +G G+ RE +F+LWFDPT++FH Y I+WKP IIF VD++PIR +
Sbjct: 16 PYVLQTNVYIRGSGDGNIVGREMKFHLWFDPTQDFHNYAILWKPSEIIFFVDDVPIRRYP 195
Query: 147 NYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNF-----DAKAS 201
+P+R PM +Y S+W A WAT G K N+++ PF Y+NF A++
Sbjct: 196 RKS--DATYPTR-PMYVYGSIWDASSWATEDGKYKANYNYQPFIGRYKNFKLQGCTAESP 366
Query: 202 IWCKGSSSCNSNSATMSDNSWQA 224
WCK S+ S ++S + A
Sbjct: 367 AWCKPPSASPSGYGSLSSRQFSA 435
>AV773075
Length = 472
Score = 118 bits (296), Expect = 8e-28
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 8/120 (6%)
Frame = +1
Query: 34 SSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSSEGP---NHDEIDFEFLGNISG 90
SSGS F+S Y G +KL G +AG +T+ YLS+ NHDEID EFLG
Sbjct: 100 SSGSGFKSLHSYRSGYLGAAIKLHPGYTAGVITSLYLSNNQDYPGNHDEIDIEFLGTTPD 279
Query: 91 EPYIVHTNVYTQGIGN-----REQQFYLWFDPTKNFHTYTIVWKPQRIIFLVDNIPIRMF 145
+PY++ TNVY +G G+ RE +F+L FDPTK+FH Y I+WKP IIFLVD++PIR +
Sbjct: 280 KPYVLQTNVYIRGSGDGKIIGREMRFHLGFDPTKDFHNYAILWKPTEIIFLVDDVPIRRY 459
>TC14368 similar to UP|Q9LLC2 (Q9LLC2) Xyloglucan endotransglycosylase XET2
, partial (46%)
Length = 565
Score = 112 bits (279), Expect = 7e-26
Identities = 55/88 (62%), Positives = 60/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 135 FLVDNIPIRMFNNYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYR 194
F VD PIR F N E GVPFP QPMRL SLW AD WATRGGLVKT+WS APF A YR
Sbjct: 2 FSVDGTPIREFKNLESAGVPFPKNQPMRLTSSLWNADNWATRGGLVKTDWSKAPFTASYR 181
Query: 195 NFDA-KASIWCKGSSSCNSNSATMSDNS 221
NF+A A +W G SSC SNS + + S
Sbjct: 182 NFNAHNACVWSGGKSSCKSNSPSSASGS 265
>TC18347 similar to PIR|T04514|T04514 xyloglucan endo-1,4-beta-D-glucanase
F16A16.40 - Arabidopsis thaliana
{Arabidopsis thaliana;} , partial (39%)
Length = 673
Score = 105 bits (261), Expect = 9e-24
Identities = 44/65 (67%), Positives = 54/65 (82%)
Frame = +3
Query: 70 LSSEGPNHDEIDFEFLGNISGEPYIVHTNVYTQGIGNREQQFYLWFDPTKNFHTYTIVWK 129
LSS G HDEIDFEFLGN +G+PYIV+TN+YT+G G+REQ+F+LWFDPT +FH YTI W
Sbjct: 333 LSSTGSQHDEIDFEFLGNTTGQPYIVNTNIYTRGKGSREQRFFLWFDPTADFHNYTIHWN 512
Query: 130 PQRII 134
P I+
Sbjct: 513 PTEIV 527
Score = 54.3 bits (129), Expect = 2e-08
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 23 AISIKTLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSAGTVTAYYLSS 72
++S K L SGS+ +SK +LFG T+M +KL+ GNSAGTVTA+Y+SS
Sbjct: 35 SLSRKMCFCLWISGSAAQSKRSFLFGSTEMLIKLIPGNSAGTVTAFYVSS 184
Score = 28.1 bits (61), Expect = 1.4
Identities = 13/28 (46%), Positives = 18/28 (63%)
Frame = +1
Query: 122 HTYTIVWKPQRIIFLVDNIPIRMFNNYE 149
H Y I+ R + VD++PIR+F NYE
Sbjct: 595 HAYLILCLSHR--WFVDSLPIRVFRNYE 672
>TC19755 similar to UP|XT33_ARATH (Q8LC45) Probable xyloglucan
endotransglucosylase/hydrolase protein 33 precursor
(At-XTH33) (XTH-33) , partial (39%)
Length = 431
Score = 85.5 bits (210), Expect = 7e-18
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Frame = +2
Query: 3 SANNNYSHHSSCAPLEFLMRAISIKTLTSLGSSGSSFRSKPEYLFGRTDMQLKLVSGNSA 62
S + +S + ++FL S+ TL SGS S+ Y +G +KL +G S+
Sbjct: 32 SIDRAFSKGFGASNVQFLSNG-SMATLALDKISGSGLVSQSRYSYGFFSAAIKLPAGLSS 208
Query: 63 GTVTAYYLSSEGP---NHDEIDFEFLGNISGEPYIVHTNVYTQG-IGN-REQQFYLWFDP 117
G V A+YLS+ +HDEID E LG+ +++ TN+Y G +G RE++FY WFDP
Sbjct: 209 GVVVAFYLSNADKFPHHHDEIDIELLGHDKRNDWVIQTNIYANGSVGTGREEKFYPWFDP 388
Query: 118 TKNFHTYTIVW 128
T+ H Y+I+W
Sbjct: 389 TQQHHYYSILW 421
>TC11219 similar to UP|O23950 (O23950) Endo-xyloglucan transferase
(Fragment), partial (35%)
Length = 590
Score = 85.5 bits (210), Expect = 7e-18
Identities = 39/79 (49%), Positives = 54/79 (67%)
Frame = +3
Query: 135 FLVDNIPIRMFNNYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYR 194
F VD++PIR++ N E G+P+PS+QPM +Y +LW A WATRGGL K +WS APF AYY+
Sbjct: 3 FYVDDVPIRVYKNNEENGIPYPSKQPMGVYCTLWAAG-WATRGGLEKIDWSKAPFIAYYK 179
Query: 195 NFDAKASIWCKGSSSCNSN 213
+F + G +C +N
Sbjct: 180 DFYIEGCPLPGGPENCTTN 236
>TC9891 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan
endotransglucosylase/hydrolase protein 9 precursor
(At-XTH9) (XTH-9) , partial (41%)
Length = 600
Score = 84.3 bits (207), Expect = 2e-17
Identities = 38/66 (57%), Positives = 47/66 (70%)
Frame = +3
Query: 135 FLVDNIPIRMFNNYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYR 194
FLVD PIR+ N E +G+PFP Q M +Y SLW AD WAT+GG VKT+WS APF A Y+
Sbjct: 3 FLVDETPIRVHMNLEHKGIPFPKDQAMGVYSSLWNADDWATQGGRVKTDWSHAPFVATYK 182
Query: 195 NFDAKA 200
+F+ A
Sbjct: 183 DFEINA 200
>TC8123 similar to UP|Q9XHM8 (Q9XHM8) Xyloglucan endo-transglycosylase-like
protein, partial (39%)
Length = 711
Score = 76.3 bits (186), Expect = 4e-15
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +2
Query: 149 EGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKGSS 208
E RG+P+P Q M +Y +LW AD WATRGGL K +WS APF AYY++FD + G +
Sbjct: 5 EARGIPYPKMQAMGVYSTLWEADNWATRGGLEKIDWSKAPFYAYYKDFDIEGCA-VPGPA 181
Query: 209 SCNSNSATMSDNSWQAQDLMVM 230
+C SN + N W+ + +
Sbjct: 182 NCASN---VQRNWWEGAEYQAL 238
>TC9789 similar to UP|XTH9_ARATH (Q8LDW9) Xyloglucan
endotransglucosylase/hydrolase protein 9 precursor
(At-XTH9) (XTH-9) , partial (38%)
Length = 563
Score = 75.5 bits (184), Expect = 7e-15
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +1
Query: 147 NYEGRGVPFPSRQPMRLYPSLWCADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKG 206
N E RG+PFP QPM +Y S+W AD WAT+GG VKT+WS APF A Y++F+ A
Sbjct: 7 NMEHRGIPFPKDQPMGVYSSIWNADDWATQGGRVKTDWSHAPFIATYKSFEINA------ 168
Query: 207 SSSCNSNSATMSDNS 221
C +S DN+
Sbjct: 169 -CECPVSSVAAVDNA 210
>TC18022 similar to UP|Q9LLC2 (Q9LLC2) Xyloglucan endotransglycosylase XET2
, partial (35%)
Length = 533
Score = 67.4 bits (163), Expect = 2e-12
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 8/66 (12%)
Frame = +3
Query: 170 ADQWATRGGLVKTNWSFAPFRAYYRNFDAKASIWCKGS-SSC-------NSNSATMSDNS 221
AD WATRGGLVKT+W+ APF A YRNF+A+A +W S SSC +S+S++ S S
Sbjct: 6 ADDWATRGGLVKTDWTQAPFTASYRNFNAQACVWSSSSGSSCSSSKKSPSSSSSSSSSQS 185
Query: 222 WQAQDL 227
W + L
Sbjct: 186 WLRESL 203
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.133 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,824,172
Number of Sequences: 28460
Number of extensions: 73187
Number of successful extensions: 383
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of query: 234
length of database: 4,897,600
effective HSP length: 87
effective length of query: 147
effective length of database: 2,421,580
effective search space: 355972260
effective search space used: 355972260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0046b.1