BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0039.1
(821 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV418552 46 2e-05
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 45 6e-05
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 44 1e-04
TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%) 42 3e-04
BI419489 42 3e-04
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 40 0.001
TC9115 similar to PIR|T00425|T00425 photolyase/blue-light recept... 40 0.001
TC15802 similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cucumber... 40 0.002
TC9679 weakly similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, p... 39 0.003
TC8122 similar to UP|Q94A43 (Q94A43) AT4g36780/C7A10_580, partia... 39 0.003
AV427017 39 0.003
TC14975 homologue to UP|Q8LG37 (Q8LG37) AtPH1-like protein, part... 39 0.003
AV418706 39 0.004
TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II ... 38 0.006
TC10717 similar to UP|Q8S564 (Q8S564) 4-coumarate:coenzyme A lig... 38 0.006
AV781200 38 0.006
TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, par... 38 0.006
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 38 0.006
TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like arabinogalac... 38 0.007
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 38 0.007
>AV418552
Length = 386
Score = 46.2 bits (108), Expect = 2e-05
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +1
Query: 328 SASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVT-- 385
S +++N A PT A + AAS++ A++ + T T PT +AA T T
Sbjct: 52 SRAATNATA-PTDAIIFSTPAAASSSLAATAAAPTTATCTAPTTTLAAATYTAPTAATNT 228
Query: 386 --TLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAG 434
T + T TGAAA +TT TT P+T +AA +TT S + G
Sbjct: 229 APTTTTCTTPTTTGAAATYTTSTHTT-----PATTLAAAAVSTTSSASTDG 366
Score = 33.5 bits (75), Expect = 0.14
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 312 AEGAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPT- 370
A A AP + +A+SS+ A A A +T A A+ + T T+ PT
Sbjct: 61 ATNATAPTDAIIFSTPAAASSSLAATAAAPTTATCTAPTTTLAAATYTAPTAATNTAPTT 240
Query: 371 ----------AEASAAAATELVTVTTLDSAAVGTATGAA 399
A A+ +T TTL +AAV T + A+
Sbjct: 241 TTCTTPTTTGAAATYTTSTHTTPATTLAAAAVSTTSSAS 357
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 44.7 bits (104), Expect = 6e-05
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 9/183 (4%)
Frame = +1
Query: 328 SASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTL 387
S S++ P ++PT AS SS SST S+ + + AT L +
Sbjct: 232 SRSTTPPSSEPTCLLAP-----ASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCP 396
Query: 388 DSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKS 447
A+ A +K T T + +PS+ S T S ++A + P S
Sbjct: 397 PPASPAATAPAPSK--TPPNPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSS 570
Query: 448 PPRQV----TPPSPPPTNDERSLSPPPRQEERPS-----PGAATTSEAAQIEQAPGNRAG 498
P Q TPPS PP + S S P +PS P ++ + +P + +
Sbjct: 571 PENQEKPASTPPSAPPRSTSSSSSSPINTPRKPSSATKAPASSPPGSELSLHHSPPSASR 750
Query: 499 SSS 501
SS
Sbjct: 751 KSS 759
Score = 33.5 bits (75), Expect = 0.14
Identities = 26/87 (29%), Positives = 37/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 394 TATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENP-KSPPRQV 452
T AAA F + TA PS+ + A T+ + AA E+ P S P +
Sbjct: 97 TPKTAAATFL*NPSLEATAS-PSSEPCTTATTTSTTKAATNSSPPESRSTTPPSSEPTCL 273
Query: 453 TPPSPPPT-NDERSLSPPPRQEERPSP 478
P+ PPT S +PPP + +P
Sbjct: 274 LAPASPPTPKSSHSSTPPPSRSSSTTP 354
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/174 (23%), Positives = 77/174 (43%), Gaps = 1/174 (0%)
Frame = -2
Query: 328 SASSSNPGAQPTAAAVAKGKKAASTAAIA-SSKSSTDGTSQLPTAEASAAAATELVTVTT 386
S+ SS+P + + G A S ++++ SS SS+ G+ L + +SAAA
Sbjct: 417 SSESSSPEPSLSDLFLFDGTPAFSPSSLSLSSPSSSSGSKSLDASSSSAAA--------- 265
Query: 387 LDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPK 446
T+ T + + S++ S++++++ S +++G
Sbjct: 264 -----------------TVRRTRYSVPKSSSSSSSSSSSSSSSSSSSGSPP--------- 163
Query: 447 SPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSS 500
PPR PPS PP++ S S P PGA+++S ++ +P + + SS
Sbjct: 162 -PPR---PPSTPPSSSSSSSS----SSSSPPPGASSSSSSSPSSSSPSSSSSSS 25
Score = 38.5 bits (88), Expect = 0.004
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = -2
Query: 410 TTADQPSTAGISAAAATT------CSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDE 463
T A PS+ +S+ ++++ S ++A R T PKS + S ++
Sbjct: 360 TPAFSPSSLSLSSPSSSSGSKSLDASSSSAAATVRRTRYSVPKSSSSSSSSSSSSSSSSS 181
Query: 464 RSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSSSHFNMLPNAIEPS 513
S SPPP + P ++++S ++ PG + SSS P++ PS
Sbjct: 180 SSGSPPPPRPPSTPPSSSSSSSSSSSSPPPGASSSSSSS----PSSSSPS 43
>TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%)
Length = 1036
Score = 42.4 bits (98), Expect = 3e-04
Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +3
Query: 403 TTIGATTTTADQPSTAGISAAA-ATTCSGAAAGDKERETEKENPKSPPRQ----VTPPSP 457
+T TA PSTA +AAA A + SG ++ + SP TPPSP
Sbjct: 123 STAPTALLTALNPSTAAPAAAASAPSASG*SSSSSSSSSSSAVLASPSTSSTAPTTPPSP 302
Query: 458 -PPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSSSHFNMLPNAIEPS 513
PP+N S SPPP +PSP +T+ Q R S S LP+ P+
Sbjct: 303 SPPSNSPTSTSPPP----QPSPPNSTSPSPPQTP----TRKTSHSPTYPLPSPYSPA 449
Score = 34.3 bits (77), Expect = 0.082
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Frame = +3
Query: 367 QLPTAEASAAAATELVTVTTLDSAAVG--TATGAAAKFTTIGATTTTADQPSTAGISAAA 424
Q P + A A T L T +AA +A+G ++ ++ +++ PST+ S A
Sbjct: 111 QRPNSTAPTALLTALNPSTAAPAAAASAPSASG*SSSSSSSSSSSAVLASPSTS--STAP 284
Query: 425 ATTCSGAAAGDKERETEKENPKSPPRQVTPPS----PPPTNDERSLSPPPRQEERPSPGA 480
T S + + T SPP Q +PP+ PP R S P PSP +
Sbjct: 285 TTPPSPSPPSNSPTST------SPPPQPSPPNSTSPSPPQTPTRKTSHSPTY-PLPSPYS 443
Query: 481 ATTSEAA 487
TS +A
Sbjct: 444 PATSTSA 464
Score = 32.0 bits (71), Expect = 0.41
Identities = 24/65 (36%), Positives = 27/65 (40%), Gaps = 8/65 (12%)
Frame = +3
Query: 445 PKSPPRQVTPPSPPPTNDERSLSPPPRQEERP--------SPGAATTSEAAQIEQAPGNR 496
PK PP Q P PPPT LSPP R +P A + AA A G
Sbjct: 54 PKPPPPQTAP--PPPT----QLSPPQRPNSTAPTALLTALNPSTAAPAAAASAPSASG*S 215
Query: 497 AGSSS 501
+ SSS
Sbjct: 216 SSSSS 230
>BI419489
Length = 479
Score = 42.4 bits (98), Expect = 3e-04
Identities = 29/97 (29%), Positives = 45/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 394 TATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVT 453
++T AK T TTT A P+ A ++AAA+ S +++ + S
Sbjct: 170 SSTTPTAKCTVPSRTTTAATAPTGASVAAAASGQSSSSSSPRSPPPLSARHSTSSTALTA 349
Query: 454 PPSPPPTND-ERSLSPPPRQEERPSPGAATTSEAAQI 489
SP PT+ R SPPP R SP ++T+ + +I
Sbjct: 350 RNSPSPTSALPR*TSPPPPTRRRTSPHSSTSPSSRRI 460
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/173 (24%), Positives = 68/173 (38%), Gaps = 4/173 (2%)
Frame = +2
Query: 314 GAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEA 373
G Q+P + SS N P + + +++T+A SS S PTA
Sbjct: 323 GPQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPRSSTRS-------PTAPP 481
Query: 374 SAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAA 433
S T+ + + T AA K + TTTA P + + T S ++
Sbjct: 482 SPPQCTKPPAPPRAPPDSSTSPTSAAGKSDS-APRTTTAPSPLRSSNP*RKSPTTSPSSR 658
Query: 434 GDKERETEKENPKSPP--RQVTPPSPPPT--NDERSLSPPPRQEERPSPGAAT 482
+ ++ P P +++PP P T +LSPP R +PSP +T
Sbjct: 659 SVRFFPPPQQKPLHPHPLSRISPPLCPSTVARSSPTLSPPRRTRTQPSPTTST 817
Score = 37.4 bits (85), Expect = 0.010
Identities = 30/155 (19%), Positives = 65/155 (41%)
Frame = +2
Query: 347 KKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIG 406
++ +S+ + ++ T + P+ +S + T + T+ + G + +A TT
Sbjct: 185 QRCSSSPWLLPPQTPTTSPAFSPSTPSSPPSTTTSPSPTSPPRSTNGPQSPSAPS-TTPP 361
Query: 407 ATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSL 466
TT++ + + ++ +T S + + P SPP+ PP+PP + S
Sbjct: 362 WTTSSQNTHQSPPSRTSSPSTSSSTTSAPRSSTRSPTAPPSPPQCTKPPAPPRAPPDSST 541
Query: 467 SPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSSS 501
SP + S TT+ + P ++ ++S
Sbjct: 542 SPTSAAGKSDSAPRTTTAPSPLRSSNP*RKSPTTS 646
>TC9115 similar to PIR|T00425|T00425 photolyase/blue-light receptor (PHR2)
[imported] - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (55%)
Length = 1018
Score = 40.4 bits (93), Expect = 0.001
Identities = 26/69 (37%), Positives = 34/69 (48%), Gaps = 17/69 (24%)
Frame = -2
Query: 440 TEKENP----KSPPRQVTPPSPPPTNDERSLSPPP-------------RQEERPSPGAAT 482
TEK NP K P+ +PP PP++ +S SPPP RQ ++PSP T
Sbjct: 855 TEKANPQHGTKCSPKSTSPPHSPPSSPPQS-SPPPSPHHAKPLCEHTQRQHQQPSPAPPT 679
Query: 483 TSEAAQIEQ 491
S A Q+ Q
Sbjct: 678 QSPACQL*Q 652
Score = 36.2 bits (82), Expect = 0.022
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 438 RETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAA 487
R NP SPP P +P +L PP PS G+ATTS +A
Sbjct: 316 RPNPPSNPPSPPTPSAPLTP*APTAPSTLPTPPHSAAPPSSGSATTSASA 465
Score = 30.4 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = +1
Query: 447 SPPRQVTPPSPPPTNDERSLSPPPRQEERPSP 478
+P R + P PPP+ S SPPP RP+P
Sbjct: 238 NPTRSKSQPKPPPS--PTSHSPPPPHPRRPNP 327
Score = 30.0 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 442 KENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATT 483
K PK PP T SPPP + R +PP P+P A T
Sbjct: 253 KSQPKPPPSP-TSHSPPPPHPRRP-NPPSNPPSPPTPSAPLT 372
>TC15802 similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cucumber hypocotyls
(Arabinogalactan protein), partial (26%)
Length = 795
Score = 39.7 bits (91), Expect = 0.002
Identities = 45/174 (25%), Positives = 65/174 (36%), Gaps = 1/174 (0%)
Frame = +2
Query: 314 GAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEA 373
G Q+P ++ S++ P + P A VA K AA+T A + S TA A
Sbjct: 101 GGQSPTAAPTTSPATPSATTPVSTPVAP-VASPKPAATTPAASPS-----------TATA 244
Query: 374 SAAAATELVT-VTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAA 432
A A T VT VT+ AAV A+ A + P+ + AA T
Sbjct: 245 PAPATTTPVTPVTSPPPAAVPVASPPPAAVPVSSPPAKSPPAPAPTAVPVAAPVTTP--- 415
Query: 433 AGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEA 486
+V P+P T + + +P P + P GA S+A
Sbjct: 416 ------------------EVPAPAPSKTKKDAAPAPSPVVPDSPPAGAPGPSDA 523
Score = 38.1 bits (87), Expect = 0.006
Identities = 39/127 (30%), Positives = 48/127 (37%)
Frame = +2
Query: 367 QLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAAT 426
Q PTA + + AT SA +T A + A TT A PSTA A A T
Sbjct: 107 QSPTAAPTTSPATP--------SATTPVSTPVAPVASPKPAATTPAASPSTATAPAPATT 262
Query: 427 TCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEA 486
T T +P PP V SPPP S SPP + P+P A +
Sbjct: 263 T----------PVTPVTSP--PPAAVPVASPPPAAVPVS-SPPAKSPPAPAPTAVPVAAP 403
Query: 487 AQIEQAP 493
+ P
Sbjct: 404 VTTPEVP 424
>TC9679 weakly similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, partial
(54%)
Length = 710
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/102 (30%), Positives = 52/102 (50%)
Frame = +3
Query: 311 QAEGAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPT 370
QAE A A SSASSSN + P++++ A+ +++ SS + T +S PT
Sbjct: 129 QAEAA-ADASSAAAAASSASSSNSSSPPSSSS------ASPSSSSGSSSAPTS*SSTSPT 287
Query: 371 AEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTA 412
+ ++ + E TT+ + +AT +A G+TTTT+
Sbjct: 288 PRSRSSTSPETTRSTTISPSTSPSATQTSAS----GSTTTTS 401
Score = 37.4 bits (85), Expect = 0.010
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 337 QPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGT-- 394
+PT A A+S AA ASS SS++ +S ++ AS ++++ + T S+ T
Sbjct: 114 KPTTAQAEAAADASSAAAAASSASSSNSSSPPSSSSASPSSSSGSSSAPTS*SSTSPTPR 293
Query: 395 ATGAAAKFTTIGATTTTADQPSTAGISAAAATT 427
+ + + TT T + + PS SA+ +TT
Sbjct: 294 SRSSTSPETTRSTTISPSTSPSATQTSASGSTT 392
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/112 (26%), Positives = 44/112 (38%), Gaps = 16/112 (14%)
Frame = +3
Query: 414 QPSTAGISAAAATTCSGAAAGDKERETEKENPKS---PPRQVTPPSPPPTNDERSLSPPP 470
+P+TA AAA + + AAA P S P + S PT+ S SP P
Sbjct: 114 KPTTAQAEAAADASSAAAAASSASSSNSSSPPSSSSASPSSSSGSSSAPTS*S-STSPTP 290
Query: 471 RQEERPSPG-------AATTSEAAQIEQAPGNRAGSSSH------FNMLPNA 509
R SP + +TS +A A G+ +S ++PN+
Sbjct: 291 RSRSSTSPETTRSTTISPSTSPSATQTSASGSTTTTSKRVRCTKTLGLIPNS 446
>TC8122 similar to UP|Q94A43 (Q94A43) AT4g36780/C7A10_580, partial (74%)
Length = 1505
Score = 38.9 bits (89), Expect = 0.003
Identities = 48/178 (26%), Positives = 70/178 (38%), Gaps = 27/178 (15%)
Frame = +2
Query: 5 SPSHATHSPKTIMTSNLPHASN-TRHPSNFPPLPIKTLLPYNHPFPRPLFTSLIAYQAPS 63
SP+ SP + + LP N T P+N PPL I P P P + +A
Sbjct: 536 SPTRMDASPSSFL---LPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSK---RKADF 697
Query: 64 SKFRSGVVAFHPFRYPLF-TSLPAGDLRLE------VPE--------IPSYRLKTFATLP 108
F +G +F+ FR+PLF TS P+ R +PE + S R +F T P
Sbjct: 698 EPFSNG--SFNAFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSGRWVSFQTTP 871
Query: 109 LPVQRAPTPEAID-----------QPSVFQDSDLIVEFVSSLGGLSDDDEFNAKLRIW 155
AP + Q S+ + L + +G SD D N +++ W
Sbjct: 872 ASAAAAPPSPTFNLVKPAIQMITPQSSMDMNEGLPWGSGAEIGRGSDFDFENGRVKPW 1045
>AV427017
Length = 429
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 277 TNAELLKARERKMTRFSPKFNTEGDGKRRGGAENQAEGAQAPKRRRLVKGSSASSSNPGA 336
T A + R R T P T +A A AP ++AS++ A
Sbjct: 12 TTAPPFRRRNRNPTTAQPTTTTA-----------EAAAASAPA------SAAASAAAAAA 140
Query: 337 QPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELV---TVTTLDSAAVG 393
PTA++ + + + +++ S +S+ G S PT+ SA+ + T TTL S +
Sbjct: 141 SPTASSASSARSSPPSSSSPPSPASSSG*SSAPTSSNSASPKPHSLNSPTPTTL-STTIS 317
Query: 394 TATGAAAKFTTIGATTTT 411
+T + T A+TTT
Sbjct: 318 PSTSPSETLTAESASTTT 371
Score = 34.3 bits (77), Expect = 0.082
Identities = 29/123 (23%), Positives = 52/123 (41%)
Frame = +3
Query: 362 TDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGIS 421
T T+ P + T T TT ++AA +A +AA A + TA S+A S
Sbjct: 3 TAPTTAPPFRRRNRNPTTAQPTTTTAEAAAA-SAPASAAASAAAAAASPTASSASSARSS 179
Query: 422 AAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAA 481
++++ A+ + + P+ + SP PT ++SP E + +A
Sbjct: 180 PPSSSSPPSPASSSG*SSAPTSSNSASPKPHSLNSPTPTTLSTTISPSTSPSETLTAESA 359
Query: 482 TTS 484
+T+
Sbjct: 360 STT 368
Score = 28.9 bits (63), Expect = 3.4
Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Frame = +3
Query: 336 AQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTA 395
A TA + + +TA ++ + S +A ASAAAA T ++ SA
Sbjct: 6 APTTAPPFRRRNRNPTTAQPTTTTAEAAAASAPASAAASAAAAAASPTASSASSAR---- 173
Query: 396 TGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTP- 454
+ +++ PS A S ++ S +A K P + ++P
Sbjct: 174 ----------SSPPSSSSPPSPASSSG*SSAPTSSNSASPKPHSLNSPTPTTLSTTISPS 323
Query: 455 --PSPPPTNDERSLSPPPRQ 472
PS T + S + P ++
Sbjct: 324 TSPSETLTAESASTTTPSKR 383
>TC14975 homologue to UP|Q8LG37 (Q8LG37) AtPH1-like protein, partial (86%)
Length = 892
Score = 38.9 bits (89), Expect = 0.003
Identities = 43/149 (28%), Positives = 58/149 (38%), Gaps = 17/149 (11%)
Frame = +3
Query: 394 TATGAAAKFTTIGATTTTA-----DQPSTAGISAAAATTCSGAAAGDKERETEKENPKSP 448
TA GA TTTA + AG A+T+ GAAAG + K+P
Sbjct: 99 TACGARRPARRSRQPTTTALNSGPTPNAPAGSQNKASTSKPGAAAGSFSNKENSSGSKTP 278
Query: 449 PRQVTP------PSPP--PTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSS 500
P + +P PSPP P+ ++ S P P TS I + R GS+
Sbjct: 279 PSRASPSHAASSPSPPVSPSRAPKTSSTNPTPSNSPRAPIRCTSSPILIRR---RRTGST 449
Query: 501 SHFNMLPNAIEPSEFL----LTGLNRDGI 525
+ +PS L +T N DGI
Sbjct: 450 LLAAPSFSTPDPSPILRSSIMTAPNADGI 536
>AV418706
Length = 374
Score = 38.5 bits (88), Expect = 0.004
Identities = 29/106 (27%), Positives = 47/106 (43%)
Frame = +1
Query: 365 TSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAA 424
TS ++ A T TV L A AT AAA ++ G++++++ S++ A +
Sbjct: 58 TSHYRRQNPNSTAPTAPPTVPVLHPLAAAAATVAAAH-SSAGSSSSSSSSSSSSAPPAPS 234
Query: 425 ATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPP 470
+T+ + A + + PP PP PP S SPPP
Sbjct: 235 STSSTTLNA----LPSPSRHSNFPPSNSPPPPPPSPPSSNSHSPPP 360
>TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II , partial
(6%)
Length = 583
Score = 38.1 bits (87), Expect = 0.006
Identities = 44/181 (24%), Positives = 66/181 (36%)
Frame = -1
Query: 321 RRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATE 380
+R V SS+SS+ P + G+K +S AI +S + P +S +
Sbjct: 469 KRCVSRSSSSSAPPSSP--------GRKKSSETAIRPHSASEPDPAPPPPPPSSPPMSPS 314
Query: 381 LVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERET 440
TAT T T P+ + + TT S A+ K +
Sbjct: 313 ------------PTATSPPTSSPNTHPPTPT---PNP*SSPSPSTTTASSASPSTKTLPS 179
Query: 441 EKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSS 500
+ P S + PS PP + S+SPP P P + S A + N + SS
Sbjct: 178 TRPRPASESPTSSSPSSPPPSSGSSVSPP---RISPPPPPPSNSPTATPPSSATNPSSSS 8
Query: 501 S 501
S
Sbjct: 7 S 5
Score = 28.1 bits (61), Expect = 5.9
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Frame = -1
Query: 405 IGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDER 464
+ +++++ PS+ G ++ T +A + + P PP PPS PP +
Sbjct: 460 VSRSSSSSAPPSSPGRKKSSETAIRPHSASEPD-------PAPPP---PPPSSPPMSPSP 311
Query: 465 SLSPPPRQE-------------ERPSPGAATTSEAA-QIEQAPGN--RAGSSSHFNMLPN 508
+ + PP PSP T S A+ + P R S S + P+
Sbjct: 310 TATSPPTSSPNTHPPTPTPNP*SSPSPSTTTASSASPSTKTLPSTRPRPASESPTSSSPS 131
Query: 509 AIEPS 513
+ PS
Sbjct: 130 SPPPS 116
>TC10717 similar to UP|Q8S564 (Q8S564) 4-coumarate:coenzyme A ligase ,
partial (32%)
Length = 691
Score = 38.1 bits (87), Expect = 0.006
Identities = 31/113 (27%), Positives = 49/113 (42%), Gaps = 8/113 (7%)
Frame = +1
Query: 363 DGTSQLPTAEASAAAATELVTVTTL-----DSAAVGTATGAAAKFTTIGATTTTADQPST 417
+ +S P + + T L T+T+L + A ++T K T + +T+ +
Sbjct: 118 NNSSSAPNSPTFPSPHTFLSTLTSLRTSPASNTAHASSTATPEKSTPMPTSTSPPGRSPP 297
Query: 418 AGISAAAAT---TCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLS 467
A +A+AT +CS + P S PR PPSPPPT R+ S
Sbjct: 298 ASTPSASATVM*SCSSSVTAPS-----LPLPSSAPRLPEPPSPPPTPSTRNRS 441
Score = 27.7 bits (60), Expect = 7.7
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +1
Query: 12 SPKTIMTSNLPHASNTRHPSNFPPLPIKTLLPYNHP 47
S +T SN HAS+T P P+P T P P
Sbjct: 187 SLRTSPASNTAHASSTATPEKSTPMPTSTSPPGRSP 294
>AV781200
Length = 556
Score = 38.1 bits (87), Expect = 0.006
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Frame = +1
Query: 327 SSASSSNPGAQPTAAA------VAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATE 380
SS +P PT A +A + AA+++A A +S+ S L T+ S+ AAT
Sbjct: 157 SSEP*HSPPTPPTLPAPASDSPIAPPQSAATSSASAPPRSTRKSASHLGTSSPSSTAAT- 333
Query: 381 LVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERET 440
TT+ +AA + A T + P AAAA T SG + R
Sbjct: 334 ----TTVVAAAASWRSSMGASPTPTRVSP*PIRSPYRGIAPAAAALTISGPSMESSSRSA 501
Query: 441 EKENPKSPPRQV 452
+ +PP++V
Sbjct: 502 LFLSSLAPPQRV 537
>TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, partial (28%)
Length = 1306
Score = 38.1 bits (87), Expect = 0.006
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 407 ATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPP-TNDERS 465
A+ +++ PS ++A A + + ++ R + NP + T P PP T+ S
Sbjct: 116 ASPSSSSPPSPTPLAAPTAPSTAASSTSSTARFPQTPNPSTASPPPTSPWTPPATSGSAS 295
Query: 466 LSPPPRQEERPSPGAATTS 484
L PPP RP P +++
Sbjct: 296 LPPPPPPPPRPFPSLCSST 352
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 38.1 bits (87), Expect = 0.006
Identities = 39/157 (24%), Positives = 65/157 (40%), Gaps = 6/157 (3%)
Frame = +1
Query: 333 NPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTA---EASAAAATELVTVTTLDS 389
NP P+ + K + + +S +++ G +Q T + S +++ T T +
Sbjct: 121 NPTLTPSWVNKQQLLKKSKPGSNSSGSTASSGPTQNQTGSP*KGSTTSSSGAPTPPTPHA 300
Query: 390 AAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSP- 448
A+ G + +++ T TT T S+A AT+ S + + P SP
Sbjct: 301 ASPGASACRSSQNQTSPPETTL-----TPPTSSAPATSASSSPPHTLPKSPSPPPPPSPL 465
Query: 449 -PRQVTPPSPPPTNDERSLSPPPR-QEERPSPGAATT 483
P PSPPPT + SP +PSP +TT
Sbjct: 466 SPPPPASPSPPPTASPSAPSPSKSPTPSKPSPPQSTT 576
Score = 35.4 bits (80), Expect = 0.037
Identities = 29/118 (24%), Positives = 43/118 (35%), Gaps = 9/118 (7%)
Frame = +1
Query: 385 TTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKEN 444
+T S TG+ K +T +++ A P T ++ A+ C + ET
Sbjct: 199 STASSGPTQNQTGSP*KGST--TSSSGAPTPPTPHAASPGASACRSSQNQTSPPETTLTP 372
Query: 445 P---------KSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAP 493
P S P P SP P LSPPP P P A+ ++ + P
Sbjct: 373 PTSSAPATSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSPPPTASPSAPSPSKSPTP 546
Score = 31.2 bits (69), Expect = 0.69
Identities = 23/95 (24%), Positives = 41/95 (42%)
Frame = +1
Query: 285 RERKMTRFSPKFNTEGDGKRRGGAENQAEGAQAPKRRRLVKGSSASSSNPGAQPTAAAVA 344
+++ + + P N+ G G +NQ KGS+ SSS PT A +
Sbjct: 151 KQQLLKKSKPGSNSSGSTASSGPTQNQTGSP*--------KGSTTSSSGAPTPPTPHAAS 306
Query: 345 KGKKAASTAAIASSKSSTDGTSQLPTAEASAAAAT 379
G A ++ +S T T +A A++A+++
Sbjct: 307 PGASACRSSQNQTSPPETTLTPPTSSAPATSASSS 411
>TC8088 similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (69%)
Length = 1527
Score = 37.7 bits (86), Expect = 0.007
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Frame = +2
Query: 385 TTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGIS-------AAAATTCSGAAAGDKE 437
TT + A AK + +TT PS+ S ++ +T+ S A
Sbjct: 194 TTTSPSPTSPARSTTAKPSPSSPSTTPPCPPSSTSTSPSPP*KTSSPSTSSSTTLAPKSS 373
Query: 438 RETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTS 484
E P SPP PP+PPP S SP ++ + SP TT+
Sbjct: 374 TR*PTEPPSSPPCS-RPPAPPPEPPATSTSPTSKEAK*ASPLRTTTA 511
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/85 (32%), Positives = 47/85 (54%), Gaps = 3/85 (3%)
Frame = -3
Query: 351 STAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTT---IGA 407
+TAA A++ SST A+ + AT + T +T+ +++ +AT A++ T I A
Sbjct: 476 TTAASATTSSST----------ATVSTATTITTASTVSASSSISATSASSPTVTASAISA 327
Query: 408 TTTTADQPSTAGISAAAATTCSGAA 432
+T TA STA +A+AA++ A
Sbjct: 326 STITASSASTATSTASAASSLHSLA 252
Score = 29.3 bits (64), Expect = 2.6
Identities = 23/77 (29%), Positives = 32/77 (40%), Gaps = 5/77 (6%)
Frame = -1
Query: 445 PKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAA-----TTSEAAQIEQAPGNRAGS 499
P+ PP PP PPP PPP R P A TS A + + G+ A
Sbjct: 367 PRPPPP*PPPPYPPPP*PPPPRPPPPAPPPRRVPCTAWPLGPVTSIA--LARPSGSEATM 194
Query: 500 SSHFNMLPNAIEPSEFL 516
+S + P +PS+ +
Sbjct: 193 NSTSSPSPRHRKPSDLI 143
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,125,717
Number of Sequences: 28460
Number of extensions: 224512
Number of successful extensions: 5127
Number of sequences better than 10.0: 412
Number of HSP's better than 10.0 without gapping: 2955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4237
length of query: 821
length of database: 4,897,600
effective HSP length: 98
effective length of query: 723
effective length of database: 2,108,520
effective search space: 1524459960
effective search space used: 1524459960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0039.1