BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0037a.5
(991 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12868 homologue to UP|AAO25536 (AAO25536) Cellulose synthase, ... 426 e-120
TC9911 similar to UP|AAO25581 (AAO25581) Cellulose synthase, par... 385 e-107
TC18701 similar to UP|Q8GSW2 (Q8GSW2) Cellulose synthase, partia... 211 1e-97
AV779485 258 4e-69
TC20121 similar to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catalyt... 251 5e-67
TC18176 homologue to UP|AAP97495 (AAP97495) Cellulose synthase, ... 237 8e-63
TC15180 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catal... 226 1e-59
AV779090 194 6e-50
AV410357 191 5e-49
TC11026 similar to UP|AAO25536 (AAO25536) Cellulose synthase, pa... 177 1e-44
AV773960 173 1e-43
BP038345 164 8e-41
TC15250 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catal... 162 2e-40
TC16614 similar to UP|Q8H2C6 (Q8H2C6) Cellulose synthase, partia... 154 5e-38
AV416600 153 1e-37
TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete 140 1e-33
TC9552 homologue to UP|Q8H2C6 (Q8H2C6) Cellulose synthase, parti... 135 4e-32
AV778804 130 1e-30
BF177827 126 1e-29
TC14362 similar to UP|AAO25581 (AAO25581) Cellulose synthase, pa... 124 6e-29
>TC12868 homologue to UP|AAO25536 (AAO25536) Cellulose synthase, partial
(34%)
Length = 1102
Score = 426 bits (1095), Expect = e-120
Identities = 206/367 (56%), Positives = 274/367 (74%), Gaps = 7/367 (1%)
Frame = +3
Query: 577 RRKALNG----FDPPKASKR-QREVQVHSKQD-ESGEDGSIKEATDEDKQLLKSHMNVEN 630
R+K G D +A KR + + + + +D E G +G D+++ LL S ++E
Sbjct: 21 RKKGRGGNKKYIDKKRAVKRTESTIPIFNMEDIEEGVEGY-----DDERSLLMSQKSLEK 185
Query: 631 KFGNSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAAD 690
+FG S +F+ ++ E+GG+ PS++ LLKEAIHV+SC YED+T WG E+G YGS+ D
Sbjct: 186 RFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTED 365
Query: 691 VLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYG 750
+LT K+H+RGW S+YCMP R AF+G+APINL++RLNQVLRWA+GS+EI SRHCP+WYG
Sbjct: 366 ILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFMSRHCPLWYG 545
Query: 751 FKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLF 810
+ G+LKGLQR+AYIN+ VYPF+SIPLL YC +PA CL+T+KFI P + FASM I LF
Sbjct: 546 Y-NGKLKGLQRLAYINTVVYPFTSIPLLAYCTLPAFCLITNKFIIPEISNFASMWFILLF 722
Query: 811 ISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNKNFSVVS 870
+SIF +AILELRWSGV +E+WWR++QFWVIG SAHLFAV Q L+ LA ++ NF+V S
Sbjct: 723 VSIFTTAILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLA-GIDTNFTVTS 899
Query: 871 KAPD-DEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFS 929
KA D D +F ELY +WT+LL+PPTT++I+NL+G+V G + AINSG S G L GKLFF+
Sbjct: 900 KANDEDGDFQELYIFKWTSLLIPPTTVLIVNLVGIVXGVSFAINSGYQSXGPLFGKLFFA 1079
Query: 930 LWVIAHL 936
+WVIAHL
Sbjct: 1080IWVIAHL 1100
>TC9911 similar to UP|AAO25581 (AAO25581) Cellulose synthase, partial (31%)
Length = 1092
Score = 385 bits (990), Expect = e-107
Identities = 191/366 (52%), Positives = 249/366 (67%), Gaps = 41/366 (11%)
Frame = +2
Query: 466 REKRPAFQHHSKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFG 525
REKRP F H KAGAMNA +R SA++SNAP++LN+DC+HY+NNSK +REAMCF MD Q G
Sbjct: 11 REKRPGFDHTKKAGAMNAWMRASAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPQLG 190
Query: 526 NSIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGFD 585
I +VQFP RFD +DR+DRY+N+N V FDIN++ DG+QGP Y+G+ C++RR AL G+D
Sbjct: 191 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVYRRYALYGYD 370
Query: 586 PPKASK---------------------------------RQREV-------QVHSKQD-E 604
P K R+++V Q+H+ ++ E
Sbjct: 371 APAKKKAPSKTCNCWPKWCCLCFPCCASRKKKNANNTKDRKKKVKHSEASKQIHALENME 550
Query: 605 SGEDGSIKEATDEDKQLLKSHMNVENKFGNSTLFMNSSLTEEGGVDPSSSQEALLKEAIH 664
+G +GS E T Q M +E +FG S +F+ S+L E GGV S +LLKEAI
Sbjct: 551 AGNEGSNNEKTSNLTQ-----MKLEKRFGQSPVFVASTLLEHGGVPKGVSPASLLKEAIQ 715
Query: 665 VLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTE 724
V+SC YED+T WG EVG YGS+ D+LT K+H GWRSVYC+PK AF+G+APINL++
Sbjct: 716 VISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKLPAFKGSAPINLSD 895
Query: 725 RLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIP 784
RL+QVLRWA+GS+EI FSRHCPIWYG+ G LK L+R +YINS VYP++S+PLL+YC +P
Sbjct: 896 RLHQVLRWALGSVEIFFSRHCPIWYGY-GGGLKWLERFSYINSVVYPWTSLPLLVYCTLP 1072
Query: 785 AICLLT 790
AICLLT
Sbjct: 1073AICLLT 1090
>TC18701 similar to UP|Q8GSW2 (Q8GSW2) Cellulose synthase, partial (28%)
Length = 969
Score = 211 bits (538), Expect(2) = 1e-97
Identities = 98/135 (72%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Frame = +2
Query: 1 MEASTRLFAGSHNSNELVVIQGNDEPKQVKNLDGQLCEICGDSVGLTVDGDLFVACEECG 60
MEAS L AGSHN NELVVI G++E K +KNLDGQ+CEICGD VGLTVDGDLFVAC ECG
Sbjct: 14 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDGVGLTVDGDLFVACNECG 193
Query: 61 FPVCRPCYEYERREGTQGCPQCHTRYKRIKGSPRVSGDEDEDDVDDIEQEFKMEEEKYKL 120
FPVCRPCYEYERREG+Q CPQC TRYKR+KGSPRV GD+DE+DVDDIE EF ++++K K
Sbjct: 194 FPVCRPCYEYERREGSQNCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNIDDQKNKQ 373
Query: 121 KQ--EEMLQGKMKHG 133
E +L GKM +G
Sbjct: 374 VNVVEALLHGKMSYG 418
Score = 163 bits (413), Expect(2) = 1e-97
Identities = 88/182 (48%), Positives = 119/182 (65%), Gaps = 31/182 (17%)
Frame = +3
Query: 134 DDDENAK--PLL-------VNGELPISSY-----------SIVEP---------AGGEKL 164
+DDEN++ P++ V+GE P+ S+ + P A EK
Sbjct: 429 EDDENSQFPPVISGGRSRPVSGEFPVGSHYGEQMLSSSLHKRIHPYPMSESGSVAWDEKK 608
Query: 165 DD--KEKTDDWKLNQGNLWPETAAPVDPEKNMNDETRQPLSRKVAIPSGRLSPYRMMVVT 222
++ K++ DDWKL QGNL PE A D + +M DE RQPLSRKV I S +++PYRM++V
Sbjct: 609 EEGWKDRMDDWKLQQGNLGPE--ADEDTDASMLDEARQPLSRKVPIASSKINPYRMVIVA 782
Query: 223 RLLLLLLFIQYRIFHPVPDAIGLWLISVVCEIWLTLSWIVDQLPKWFPIDRETYLDRLSI 282
RL++L F++YRI +PV DA+GLWL S++CEIW L+WI+DQ PKWFPIDRET LDRLSI
Sbjct: 783 RLVILAFFLRYRILNPVHDALGLWLTSIICEIWFALTWILDQFPKWFPIDRET*LDRLSI 962
Query: 283 RF 284
R+
Sbjct: 963 RY 968
>AV779485
Length = 551
Score = 258 bits (658), Expect = 4e-69
Identities = 118/176 (67%), Positives = 144/176 (81%), Gaps = 2/176 (1%)
Frame = -1
Query: 318 LSILALDYPAHKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSAEPRAPERYFSQ 377
LSILA+DYP K++CYVSDDGA+MLTFEAL ET+EFAR+WVPFCKK++ EPRAPE YF
Sbjct: 551 LSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARRWVPFCKKYNIEPRAPEWYFGL 372
Query: 378 KIDFLKDTLQSTYVKERRTMKREYEEFKVRINALVAKSLRVPPEGWTLKDETPWPGNNTK 437
KID+L++ + +V+ERR MKR+YEEFKV+IN+LVA + +VP +GWT++D TPWPGNN +
Sbjct: 371 KIDYLRNKVHPAFVRERRAMKRDYEEFKVKINSLVATATKVPEDGWTMQDGTPWPGNNVR 192
Query: 438 DHPSMIQILLGHS--EGHEGNELPCLIYISREKRPAFQHHSKAGAMNALLRVSAVL 491
DHP MIQ+ LGH EGNELP L+Y SREKRP F HH KAGAMNAL+R SA L
Sbjct: 191 DHPGMIQVFLGHDGVRDVEGNELPRLVYCSREKRPGFDHHKKAGAMNALMRASAYL 24
>TC20121 similar to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catalytic subunit
(AT5g17420/T10B6_80), partial (21%)
Length = 645
Score = 251 bits (640), Expect = 5e-67
Identities = 120/214 (56%), Positives = 152/214 (70%), Gaps = 13/214 (6%)
Frame = +3
Query: 498 LNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFDSLDRNDRYANKNTVLFDIN 557
LNLDC+HY+NNSK VREAMCF MD Q G + +VQFP RFD +D +DRYAN+NTV FDIN
Sbjct: 3 LNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 182
Query: 558 LRCQDGLQGPAYIGSACIFRRKALNGFDPPKASKRQREVQV-------------HSKQDE 604
++ DG+QGP Y+G+ C+FRR+AL G++PPK KR + V H+K D
Sbjct: 183 MKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKLKHAKSDV 362
Query: 605 SGEDGSIKEATDEDKQLLKSHMNVENKFGNSTLFMNSSLTEEGGVDPSSSQEALLKEAIH 664
+GE S+K D+DK++L S MN E KFG S++F+ S+L EEGGV PSSS +LKEAIH
Sbjct: 363 NGEAASLK-GMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGMLKEAIH 539
Query: 665 VLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKLH 698
V+SC YED+T WG EVG YGSI D+LT K+H
Sbjct: 540 VISCGYEDKTEWGLEVGWIYGSITEDILTGFKMH 641
>TC18176 homologue to UP|AAP97495 (AAP97495) Cellulose synthase, partial
(22%)
Length = 743
Score = 237 bits (604), Expect = 8e-63
Identities = 117/247 (47%), Positives = 159/247 (64%), Gaps = 32/247 (12%)
Frame = +3
Query: 485 LRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFDSLDRND 544
+R AVL+N PF+LNLDC+HY+NNSK +REAMCF MD G ++ +VQFP RFD +DRND
Sbjct: 3 IRHEAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRND 182
Query: 545 RYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGFDPPKASKRQREVQVHS---- 600
RYAN+NTV FDINLR DG+QGP Y+G+ C+F R AL G++PP K ++ + S
Sbjct: 183 RYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLFGG 362
Query: 601 ---KQDESGEDGSIKEAT-------------------------DEDKQLLKSHMNVENKF 632
K +S + GS K+ + D++K LL S M++E +F
Sbjct: 363 DRKKSSKSNKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRF 542
Query: 633 GNSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVL 692
G S +F+ S+L E GGV S++ E LLKEAIHV+SC YED++ WG E+G YGS+ D+L
Sbjct: 543 GQSAVFVASTLMENGGVPQSATPEILLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDIL 722
Query: 693 TSLKLHS 699
T K+H+
Sbjct: 723 TGFKMHA 743
>TC15180 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (15%)
Length = 814
Score = 226 bits (576), Expect = 1e-59
Identities = 103/161 (63%), Positives = 133/161 (81%), Gaps = 1/161 (0%)
Frame = +3
Query: 832 WRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPDDE-EFHELYTIRWTALL 890
WR++QFWVIG VSAHLFAV Q L+ LA ++ NF+V SK+ D++ +F ELY +WT LL
Sbjct: 3 WRNEQFWVIGGVSAHLFAVFQGLLKVLAG-IDTNFTVTSKSSDEDGDFEELYMFKWTTLL 179
Query: 891 VPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRT 950
+PPTT++IIN++GVVAG + A+NSG S+G L GKLFF+ WVI HLYPFL+GLMGRQNRT
Sbjct: 180 IPPTTLLIINMVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIVHLYPFLRGLMGRQNRT 359
Query: 951 PTLIVIWSVLLASIFSLVWVRLDPFVLKTKGPDVKQCGISC 991
PT++V+WS+LLASIFSL+WVR+DPF K GP V++CGI+C
Sbjct: 360 PTIVVVWSILLASIFSLLWVRIDPFTTKVTGPKVEECGINC 482
>AV779090
Length = 479
Score = 194 bits (493), Expect = 6e-50
Identities = 89/152 (58%), Positives = 121/152 (79%)
Frame = +2
Query: 825 GVSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPDDEEFHELYTI 884
GV +++ WR++Q WVIG VS++LFA+ L+ LA V+ NF+V SKA DD F ELY
Sbjct: 5 GVGIDDGWRNEQLWVIGGVSSYLFALFHGLLKVLAG-VDTNFTVTSKAADDGAFSELYIF 181
Query: 885 RWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLM 944
+WT+LL+ PTT++IIN++GVV G +DAIN+G S+G LLG+LFF LWVI HLYPFLKGL+
Sbjct: 182 KWTSLLIAPTTLLIINMVGVVVGISDAINNGYDSWGPLLGRLFFGLWVIIHLYPFLKGLL 361
Query: 945 GRQNRTPTLIVIWSVLLASIFSLVWVRLDPFV 976
G+Q+R PT++ +WS+LLASI +L+WVR+ PFV
Sbjct: 362 GKQDRMPTIVWVWSILLASILTLMWVRIKPFV 457
>AV410357
Length = 375
Score = 191 bits (485), Expect = 5e-49
Identities = 89/124 (71%), Positives = 109/124 (87%)
Frame = +3
Query: 276 YLDRLSIRFEPENKPNMLSPVDIFVTTVDPIKEPPLVTANTVLSILALDYPAHKISCYVS 335
YLDRL++R++ E +P+ L+ VDIFV+TVDP+KEPPLVTANTVLSILA+DYP K+SCYVS
Sbjct: 3 YLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVS 182
Query: 336 DDGASMLTFEALQETAEFARKWVPFCKKFSAEPRAPERYFSQKIDFLKDTLQSTYVKERR 395
DDGA+MLTFEAL ET+EFARKWVPF KK+S EPRAPE YF+ KID+LKD + ++VK+RR
Sbjct: 183 DDGAAMLTFEALAETSEFARKWVPFAKKYSIEPRAPEWYFALKIDYLKDKVHPSFVKDRR 362
Query: 396 TMKR 399
MKR
Sbjct: 363 AMKR 374
>TC11026 similar to UP|AAO25536 (AAO25536) Cellulose synthase, partial (25%)
Length = 946
Score = 177 bits (448), Expect = 1e-44
Identities = 102/237 (43%), Positives = 135/237 (56%), Gaps = 17/237 (7%)
Frame = +1
Query: 1 MEASTRLFAGSHNSNELVVIQGNDE---PKQVKNLDGQLCEICGDSVGLTVDGDLFVACE 57
MEA+ + AGSH NELV I+ + PK +KNL+GQ+C+ICGD+VG++ GD+FVAC
Sbjct: 79 MEANAGMVAGSHKRNELVRIRHDSSDSGPKPLKNLNGQICQICGDNVGISATGDVFVACN 258
Query: 58 ECGFPVCRPCYEYERREGTQGCPQCHTRYKRIKGSPRVSGDEDEDDVDDIEQEFKMEEEK 117
ECGFPVCRPCYEYER++G Q CPQC TRYKR +GS RV GDEDEDDVDD+E EF +
Sbjct: 259 ECGFPVCRPCYEYERKDGNQSCPQCKTRYKRQRGSARVDGDEDEDDVDDLENEFNYVQGN 438
Query: 118 YKLKQ--EEMLQGKMKHGDDDENAKPLLVN-----GELPIS---SYSIVEPAG----GEK 163
K + EE + D + PLL N GE+P + + S+ +G G+K
Sbjct: 439 AKASRQWEEGSDLSLSSRRDPQQPIPLLTNGQTVSGEIPCATPDTQSVRTTSGPLGPGDK 618
Query: 164 LDDKEKTDDWKLNQGNLWPETAAPVDPEKNMNDETRQPLSRKVAIPSGRLSPYRMMV 220
TD + P VDP K++N + K + +L + MV
Sbjct: 619 AHSLHYTDPRQ-------PVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMV 768
Score = 28.5 bits (62), Expect = 5.5
Identities = 12/27 (44%), Positives = 20/27 (73%)
Frame = +3
Query: 201 PLSRKVAIPSGRLSPYRMMVVTRLLLL 227
P+SR V I S +++PYR++++ R L L
Sbjct: 864 PMSRIVPISSTQITPYRVVIILR*LFL 944
>AV773960
Length = 503
Score = 173 bits (438), Expect = 1e-43
Identities = 77/120 (64%), Positives = 97/120 (80%)
Frame = +2
Query: 679 EVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLE 738
++G YGS+ D+LT K+H RGWRS+YCMP R AF+G+APINL++R +QVLRWA+GS+E
Sbjct: 80 QMGWIYGSVTEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDR*HQVLRWALGSVE 259
Query: 739 ILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSV 798
I FSRHCP+WYG GRL LQR+AYIN+ VYPF+S+PL+ Y PAICLLT KFI P+V
Sbjct: 260 IFFSRHCPLWYGLAGGRLSWLQRLAYINTIVYPFTSLPLVAYGSWPAICLLTGKFIIPTV 439
>BP038345
Length = 528
Score = 164 bits (414), Expect = 8e-41
Identities = 71/113 (62%), Positives = 91/113 (79%)
Frame = -1
Query: 482 NALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFDSLD 541
N+L+RVSAVL+N PF+LNLDC+HY+NNSK +REAMCF MD G ++ +VQFP RFD +D
Sbjct: 528 NSLVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGID 349
Query: 542 RNDRYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGFDPPKASKRQR 594
+NDRYAN+NTV FDINLR DG+QGP Y+G+ C+F R AL G+DPP K ++
Sbjct: 348 KNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYDPPVKPKHKK 190
>TC15250 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catalytic
subunit (AT5g17420/T10B6_80), partial (9%)
Length = 602
Score = 162 bits (410), Expect = 2e-40
Identities = 74/94 (78%), Positives = 85/94 (89%)
Frame = +3
Query: 898 IINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIW 957
IIN++GVVAG +DAI++G S+G L GKLFFS WVI HLYPFLKGLMGRQNRTPT++VIW
Sbjct: 3 IINIVGVVAGVSDAIHNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIW 182
Query: 958 SVLLASIFSLVWVRLDPFVLKTKGPDVKQCGISC 991
SVLLASIFSL+WVR+DPFVLKTKGPD K CGI+C
Sbjct: 183 SVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 284
>TC16614 similar to UP|Q8H2C6 (Q8H2C6) Cellulose synthase, partial (23%)
Length = 1174
Score = 154 bits (390), Expect = 5e-38
Identities = 95/276 (34%), Positives = 134/276 (48%), Gaps = 70/276 (25%)
Frame = +3
Query: 16 ELVVIQGNDEPKQVKNLDGQLCEICGDSVGLTVDGDLFVACEECGFPVCRPCYEYERREG 75
E + +G K + Q+C+IC D+VG TVDG+ F+AC+ C FPVCRPCYEYER++G
Sbjct: 348 EAMESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFMACDVCAFPVCRPCYEYERKDG 527
Query: 76 TQGCPQCHTRYKRIKGSPRVSGD-EDEDDVDDIEQEFKMEEEKYKLKQ---EEMLQGKMK 131
Q CPQC TRYKR KGSP + GD E+E DD +F + E KQ E M ++
Sbjct: 528 NQSCPQCKTRYKRHKGSPAMLGDSEEEGGADDGASDFNYDSEHQNQKQKISERMWGWQLT 707
Query: 132 HGDDDE------------NAKPLLVNGELPISSYSIVEP----------AGGEKLDD--- 166
+G +E N P L +G+ +S P GG+++ +
Sbjct: 708 YGRSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPY 887
Query: 167 -----------------------KEKTDDWKLNQ------------------GNLWPETA 185
KE+ D WK+ Q G++ T
Sbjct: 888 SSDVNQSPNIRVGDSGGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTD 1067
Query: 186 APVDPEKNMNDETRQPLSRKVAIPSGRLSPYRMMVV 221
VD + +NDE RQPLSRKV++PS R++PYRM+++
Sbjct: 1068VLVD-DSLLNDEARQPLSRKVSVPSSRINPYRMVII 1172
>AV416600
Length = 378
Score = 153 bits (387), Expect = 1e-37
Identities = 70/125 (56%), Positives = 99/125 (79%)
Frame = +2
Query: 796 PSVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALM 855
P + AS++ + LF+SI +++LELRWSGVS+E+ WR++QFWVIG VSAHLFAV Q L+
Sbjct: 5 PVLSNLASVLFLGLFLSIIMTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLL 184
Query: 856 GGLAKKVNKNFSVVSKAPDDEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSG 915
LA V+ NF+V +KA +D EF +LY ++WT LL+PPTT+I++N++GVVAGF+DA+N G
Sbjct: 185 KMLAG-VDTNFTVTAKAAEDGEFGDLYIVKWTTLLIPPTTLIVVNMVGVVAGFSDALNGG 361
Query: 916 AHSYG 920
S+G
Sbjct: 362 YESWG 376
>TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete
Length = 1793
Score = 140 bits (352), Expect = 1e-33
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 9/148 (6%)
Frame = +1
Query: 10 GSHNSNELVVIQ-GNDE-PKQVKNLDGQLCEICGDSVGLTVDGDLFVACEECGFPVCRPC 67
GSH NELV ++ G+D K VKNL+GQ+C+ICG++VGLT +GD+FVAC EC F +C PC
Sbjct: 481 GSHERNELVRVRHGSDHGSKPVKNLNGQICQICGETVGLTANGDIFVACHECAFQLCHPC 660
Query: 68 YEYERREGTQGCPQCHTRYKRIKGSPRVSG----DEDEDDVDDIEQEFKM---EEEKYKL 120
YEYER + CPQC TRY+ K S ++ G D+DEDDVDD+E E K K +L
Sbjct: 661 YEYERNNVSPYCPQCKTRYESHKESSQMEGDDDDDDDEDDVDDLENEVKYGQGNRMKARL 840
Query: 121 KQEEMLQGKMKHGDDDENAKPLLVNGEL 148
+ EE G D + P L NG+L
Sbjct: 841 QWEEDADLSSSSGHDSQMQNPHLTNGQL 924
>TC9552 homologue to UP|Q8H2C6 (Q8H2C6) Cellulose synthase, partial (9%)
Length = 592
Score = 135 bits (339), Expect = 4e-32
Identities = 67/129 (51%), Positives = 88/129 (67%), Gaps = 11/129 (8%)
Frame = +1
Query: 874 DDEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYG---------ALLG 924
+D + ELY +WT LL+PPTT++IINL+G VAG N H+ +L+
Sbjct: 10 EDXDSAELYLFKWTTLLIPPTTLLIINLVGFVAG-----NFVCHTLTRWLWVLGSCSLVR 174
Query: 925 KLFFSLWV--IAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPFVLKTKGP 982
F+ WV LYPFLKGLMGRQNRTPT++V+WS+LLASIFSL+WVR+DPF + GP
Sbjct: 175 TFSFAFWVRFFRLLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGP 354
Query: 983 DVKQCGISC 991
V++CGI+C
Sbjct: 355 KVEECGINC 381
>AV778804
Length = 573
Score = 130 bits (326), Expect = 1e-30
Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
Frame = +1
Query: 167 KEKTDDWKLNQGNLWPETAAPVDPEKNMND------ETRQPLSRKVAIPSGRLSPYRMMV 220
KEK K + E P+ PE+ M + +PLS + I +LSPYR ++
Sbjct: 151 KEKDKKKKKKKEAPKAENEMPIPPEQQMEEMQSTEAAAAEPLSVIIPISKTKLSPYRFVI 330
Query: 221 VTRLLLLLLFIQYRIFHPVPDAIGLWLISVVCEIWLTLSWIVDQLPKWFPIDRETYLDRL 280
+ RL++L LF YR+ HPV A GLWL S++CEIW +W++DQ PKW PI+RET++DRL
Sbjct: 331 IMRLIILGLFFHYRVTHPVDSAFGLWLTSIICEIWFAFAWVLDQFPKWSPINRETFIDRL 510
Query: 281 SIRFEPENKPNMLSPVDIFVT 301
S R+E +P+ L+ VD FV+
Sbjct: 511 SARYEQNVEPSQLAAVDFFVS 573
>BF177827
Length = 494
Score = 126 bits (317), Expect = 1e-29
Identities = 66/134 (49%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Frame = +2
Query: 631 KFGNSTLFMNSSLTEEGGVDPSSSQEAL--------------------LKEAIHVLSCRY 670
KFGNST + S E P + A+ + EAI V+SC Y
Sbjct: 65 KFGNSTFLIESIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLDAATVAEAISVISCWY 244
Query: 671 EDRTLWGYEVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVL 730
ED+T WG VG YGS+ DV+T ++H+RGW+SVYC+ KR AFRGTAPINLT+RL+QVL
Sbjct: 245 EDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVL 424
Query: 731 RWAVGSLEILFSRH 744
RWA GS+EI FSR+
Sbjct: 425 RWATGSVEIFFSRN 466
>TC14362 similar to UP|AAO25581 (AAO25581) Cellulose synthase, partial (9%)
Length = 741
Score = 124 bits (312), Expect = 6e-29
Identities = 51/96 (53%), Positives = 80/96 (83%)
Frame = +3
Query: 896 IIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIV 955
++IIN++G++ G +DAIN+ S+G L G+LFF+LW + HLYPFLKGL+G+Q+R PT+++
Sbjct: 3 LLIINIVGIIVGISDAINNVYDSWGPLFGRLFFALWFVLHLYPFLKGLLGKQDRMPTIVL 182
Query: 956 IWSVLLASIFSLVWVRLDPFVLKTKGPDVKQCGISC 991
+WS+LLASI +L+WVR++PFV + GP ++ CG++C
Sbjct: 183 VWSILLASILTLMWVRINPFVSR-DGPVLEICGLNC 287
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,966,212
Number of Sequences: 28460
Number of extensions: 287553
Number of successful extensions: 1624
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of query: 991
length of database: 4,897,600
effective HSP length: 99
effective length of query: 892
effective length of database: 2,080,060
effective search space: 1855413520
effective search space used: 1855413520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0037a.5