BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0033b.6
(717 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14612 similar to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-... 593 e-170
TC14613 homologue to UP|PAL2_PEA (Q04593) Phenylalanine ammonia-... 578 e-166
TC14614 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammoni... 355 2e-98
TC9381 similar to UP|PALY_STYHU (P45732) Phenylalanine ammonia-l... 353 4e-98
TC16305 similar to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-... 303 5e-83
TC8115 similar to PIR|A24727|A24727 phenylalanine ammonia-lyase ... 293 5e-80
AV409143 253 6e-68
TC18515 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammoni... 247 5e-66
BP052646 242 1e-64
TC19048 homologue to PIR|A24727|A24727 phenylalanine ammonia-lya... 130 9e-63
AU252212 202 2e-52
TC13959 similar to UP|PALY_MEDSA (P27990) Phenylalanine ammonia-... 199 2e-51
BP084072 196 1e-50
CB826882 148 3e-36
BP080571 56 2e-16
CB826653 70 9e-13
BP061895 33 0.001
AV772637 28 5.1
TC14651 weakly similar to UP|Q42779 (Q42779) Alpha-carboxyltrans... 27 8.7
>TC14612 similar to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 ,
partial (43%)
Length = 1049
Score = 593 bits (1529), Expect = e-170
Identities = 297/309 (96%), Positives = 302/309 (97%)
Frame = +3
Query: 409 SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCS 468
SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSL YG KGAEIAMASYCS
Sbjct: 3 SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLYYGFKGAEIAMASYCS 182
Query: 469 ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRH 528
ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDL+H
Sbjct: 183 ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLKH 362
Query: 529 LEENLKYSVKSTVSQVVKRTLTTGVNGELHPSRFCEKDLLKVVDRETLFSYIDDPCSATY 588
LEENLKYSV+STVSQV +RTLTTGVNGELHPSRFCEKDLLKVVDRETLF+YIDDPC ATY
Sbjct: 363 LEENLKYSVQSTVSQVAERTLTTGVNGELHPSRFCEKDLLKVVDRETLFAYIDDPCLATY 542
Query: 589 PLMQKLRQVLVDHALVNGENEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPT 648
PLMQKLRQVLV HALVNGENEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNP
Sbjct: 543 PLMQKLRQVLVXHALVNGENEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPA 722
Query: 649 IPNKINECRSYPLYKFVREELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGE 708
IPNKINECRSYPLYKFVREELGTELLTGEKTRSPGEE DKLFTAICQGKIIDPL+ECLGE
Sbjct: 723 IPNKINECRSYPLYKFVREELGTELLTGEKTRSPGEEFDKLFTAICQGKIIDPLMECLGE 902
Query: 709 WNGAPLPIC 717
WNGAPLPIC
Sbjct: 903 WNGAPLPIC 929
>TC14613 homologue to UP|PAL2_PEA (Q04593) Phenylalanine ammonia-lyase 2 ,
partial (47%)
Length = 1048
Score = 578 bits (1491), Expect = e-166
Identities = 294/301 (97%), Positives = 298/301 (98%)
Frame = +3
Query: 229 SGEVLNAKNAFQLAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFDANVLAILAEVLS 288
SG+VLNAK AFQ AGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFDAN+LAIL+EVLS
Sbjct: 144 SGKVLNAKEAFQSAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFDANILAILSEVLS 323
Query: 289 AIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPK 348
AIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPK
Sbjct: 324 AIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPK 503
Query: 349 QDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV 408
QDRYALRTSPQWLGPLIEVIRFSTKSIER+INSVNDNPLIDVSRNKALHGGNFQGTPIGV
Sbjct: 504 QDRYALRTSPQWLGPLIEVIRFSTKSIERDINSVNDNPLIDVSRNKALHGGNFQGTPIGV 683
Query: 409 SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCS 468
SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCS
Sbjct: 684 SMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCS 863
Query: 469 ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRH 528
ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKT EAIEILKLMSSTFLIALCQAIDLRH
Sbjct: 864 ELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILKLMSSTFLIALCQAIDLRH 1043
Query: 529 L 529
L
Sbjct: 1044L 1046
Score = 81.6 bits (200), Expect = 4e-16
Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +1
Query: 184 TKLINNNITPCLPLRGTVTASGDLVPLSYIAGLLTGRPNSKAV----GPSGEVLNAKNAF 239
TKLINNNITPCLPLRGTVTASGDLVPLSYIAGLLTGR NS ++ + ++ K +
Sbjct: 1 TKLINNNITPCLPLRGTVTASGDLVPLSYIAGLLTGRQNSXSLL*XPXLARYLMPRKLSN 180
Query: 240 QLAGIDSGFFELQPKEGLALV 260
QLA G P++GL L+
Sbjct: 181 QLA-*TQGSLNCSPRKGLLLL 240
>TC14614 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1
, partial (26%)
Length = 550
Score = 355 bits (910), Expect = 2e-98
Identities = 181/183 (98%), Positives = 182/183 (98%)
Frame = +2
Query: 364 LIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKL 423
LIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKL
Sbjct: 2 LIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKL 181
Query: 424 MFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQS 483
MFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQS
Sbjct: 182 MFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQS 361
Query: 484 AEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQ 543
AEQHNQDVNSLGLISSRKTNEA+EILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQ
Sbjct: 362 AEQHNQDVNSLGLISSRKTNEAVEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQ 541
Query: 544 VVK 546
V K
Sbjct: 542 VAK 550
>TC9381 similar to UP|PALY_STYHU (P45732) Phenylalanine ammonia-lyase ,
partial (30%)
Length = 997
Score = 353 bits (907), Expect = 4e-98
Identities = 179/212 (84%), Positives = 196/212 (92%), Gaps = 1/212 (0%)
Frame = +2
Query: 26 DPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQG-VSVELC 84
DPL+WG AAE+MKGSHL+EVKRMV EYRKPVV+LGGETLTIAQVAA+AA++QG V+VEL
Sbjct: 230 DPLNWGAAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTIAQVAAVAAHDQGAVTVELS 409
Query: 85 ESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGNALQLELIRFLNAGIFGN 144
ES+RAGV+AS +WV +SMN GTDSYGVTTGFGATSHRRTK G ALQ ELIRFLNAGIFGN
Sbjct: 410 ESSRAGVEASRNWVRDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGN 589
Query: 145 GTESTHTLPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLRGTVTAS 204
GTES TLP ATRAAMLVRINTLLQGYSGIRFEILEAITKLIN+N+ PCLPLRGT+TAS
Sbjct: 590 GTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNVAPCLPLRGTITAS 769
Query: 205 GDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAK 236
GDLVPLSYIAGLLTGRPNSKAVGPSGE+L A+
Sbjct: 770 GDLVPLSYIAGLLTGRPNSKAVGPSGEILTAQ 865
>TC16305 similar to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 ,
partial (21%)
Length = 637
Score = 303 bits (777), Expect = 5e-83
Identities = 157/176 (89%), Positives = 162/176 (91%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 MAPNTN---QTQNGSFICTAANGTATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVV 57
MAP TN Q+QN S CTAA +DPLSWGVAAESMKGSHL+EVKRMVAEYRKPVV
Sbjct: 118 MAPTTNGHHQSQNDSIFCTAAKA---GSDPLSWGVAAESMKGSHLDEVKRMVAEYRKPVV 288
Query: 58 KLGGETLTIAQVAAIAANEQGVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGA 117
KLGGETLTIAQVAAIAAN+QGVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGA
Sbjct: 289 KLGGETLTIAQVAAIAANDQGVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGA 468
Query: 118 TSHRRTKNGNALQLELIRFLNAGIFGNGTESTHTLPQPATRAAMLVRINTLLQGYS 173
TSHRRTKNGNALQLELIRFLNAGIFGNGTE+ HTLPQPATRAAMLVRINTLLQGYS
Sbjct: 469 TSHRRTKNGNALQLELIRFLNAGIFGNGTETNHTLPQPATRAAMLVRINTLLQGYS 636
>TC8115 similar to PIR|A24727|A24727 phenylalanine ammonia-lyase - kidney
bean (fragment) {Phaseolus vulgaris;} ,
partial (34%)
Length = 760
Score = 293 bits (751), Expect = 5e-80
Identities = 140/170 (82%), Positives = 152/170 (89%)
Frame = +2
Query: 548 TLTTGVNGELHPSRFCEKDLLKVVDRETLFSYIDDPCSATYPLMQKLRQVLVDHALVNGE 607
TLTTGVNGELHPSRFCEKDLL VVDRE +F+YIDDPCS TYPLMQKLRQ LVDHAL N +
Sbjct: 17 TLTTGVNGELHPSRFCEKDLLTVVDREDVFAYIDDPCSGTYPLMQKLRQSLVDHALENAD 196
Query: 608 NEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVRE 667
EK+ TSIFQKIA FEDELK++LPKEVESAR AY++G IPNKI ECRSYPLYKFVRE
Sbjct: 197 AEKNVNTSIFQKIAIFEDELKAILPKEVESARVAYDNGESAIPNKIKECRSYPLYKFVRE 376
Query: 668 ELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
ELGT LLTGEK +SPGE+ DKLFTA+CQGKIIDP+LECLGEWNGAPLPIC
Sbjct: 377 ELGTGLLTGEKVKSPGEDFDKLFTAMCQGKIIDPILECLGEWNGAPLPIC 526
>AV409143
Length = 415
Score = 253 bits (647), Expect = 6e-68
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +1
Query: 152 LPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLRGTVTASGDLVPLS 211
LPQPATRAAMLVRINTLLQGYSGIRFEILEAITKL+NNNITPCLPLRGTVTASGDLVPLS
Sbjct: 4 LPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTVTASGDLVPLS 183
Query: 212 YIAGLLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKEGLALVNGTAVGSGLAS 271
YIAGLLTGRPNSKAVGPSGEVLNAK AF+LA IDSGFFELQPKEGLALVNGTAVGSGLAS
Sbjct: 184 YIAGLLTGRPNSKAVGPSGEVLNAKEAFELASIDSGFFELQPKEGLALVNGTAVGSGLAS 363
Query: 272 IVLFDANVLAILAEVLS 288
IVLF+AN+LA+L+EVLS
Sbjct: 364 IVLFEANILAVLSEVLS 414
>TC18515 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1
, partial (19%)
Length = 575
Score = 247 bits (630), Expect = 5e-66
Identities = 129/154 (83%), Positives = 138/154 (88%), Gaps = 2/154 (1%)
Frame = +3
Query: 1 MAPNTNQTQNGSFICTAANGTATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLG 60
MA TN +QN S CTA G+ DPL+WGVAAESMKGSHL+EVKRMVAEYRKPVV+LG
Sbjct: 129 MAATTN-SQNSSLFCTAKGGS----DPLNWGVAAESMKGSHLDEVKRMVAEYRKPVVRLG 293
Query: 61 GETLTIAQVAAIAANEQ--GVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGAT 118
GETLTIAQVAA+AA++Q GVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGAT
Sbjct: 294 GETLTIAQVAAVAAHDQHNGVSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGAT 473
Query: 119 SHRRTKNGNALQLELIRFLNAGIFGNGTESTHTL 152
SHRRTK GNALQ ELIRFLNAGIFGNGTES+HTL
Sbjct: 474 SHRRTKQGNALQQELIRFLNAGIFGNGTESSHTL 575
>BP052646
Length = 514
Score = 242 bits (618), Expect = 1e-64
Identities = 117/121 (96%), Positives = 119/121 (97%)
Frame = -1
Query: 597 VLVDHALVNGENEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPTIPNKINEC 656
VLVDHALVNGE EKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNP +PNKINEC
Sbjct: 514 VLVDHALVNGEYEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPAMPNKINEC 335
Query: 657 RSYPLYKFVREELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPI 716
RSYPLYKFVR+ELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPI
Sbjct: 334 RSYPLYKFVRKELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPI 155
Query: 717 C 717
C
Sbjct: 154 C 152
>TC19048 homologue to PIR|A24727|A24727 phenylalanine ammonia-lyase -
kidney bean (fragment) {Phaseolus
vulgaris;} , partial (27%)
Length = 414
Score = 130 bits (326), Expect(2) = 9e-63
Identities = 63/78 (80%), Positives = 70/78 (88%)
Frame = +1
Query: 401 FQGTPIGVSMDNTRLALAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAE 460
F+ P+ V+MDNTRLALA+IGKL+FAQF+ELV+D YNNG PSNL SRNPSLDYG KGAE
Sbjct: 181 FKEPPLRVAMDNTRLALASIGKLLFAQFSELVNDFYNNGXPSNLYGSRNPSLDYGFKGAE 360
Query: 461 IAMASYCSELQYLANPVT 478
IAMASYCSELQYLANPVT
Sbjct: 361 IAMASYCSELQYLANPVT 414
Score = 128 bits (321), Expect(2) = 9e-63
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +3
Query: 342 DPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNF 401
DPLQKPKQDRYALRTS QWLGPLIEV RFSTKSIERE+NSVNDNPLIDV+RNKALHGGNF
Sbjct: 3 DPLQKPKQDRYALRTSRQWLGPLIEVSRFSTKSIERELNSVNDNPLIDVARNKALHGGNF 182
Query: 402 QGTPI 406
QGTPI
Sbjct: 183 QGTPI 197
>AU252212
Length = 350
Score = 202 bits (513), Expect = 2e-52
Identities = 99/116 (85%), Positives = 109/116 (93%)
Frame = +3
Query: 216 LLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLF 275
LLTGRPNSKAVGPSGE+L AK AF+LA I FFEL+PKEGLALVNGTAVGSGLA+IVLF
Sbjct: 3 LLTGRPNSKAVGPSGEILTAKEAFELANIGHDFFELEPKEGLALVNGTAVGSGLAAIVLF 182
Query: 276 DANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 331
+AN+LA+L+E++SAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY
Sbjct: 183 EANILAVLSELISAIFAEVMLGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 350
>TC13959 similar to UP|PALY_MEDSA (P27990) Phenylalanine ammonia-lyase ,
partial (13%)
Length = 494
Score = 199 bits (505), Expect = 2e-51
Identities = 94/96 (97%), Positives = 95/96 (98%)
Frame = +1
Query: 622 TFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKTRS 681
TFEDELKSLLP EVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKTRS
Sbjct: 1 TFEDELKSLLPXEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKTRS 180
Query: 682 PGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
PGEECD+LFTAICQGKIIDPLLECLGEWNGAPLPIC
Sbjct: 181 PGEECDQLFTAICQGKIIDPLLECLGEWNGAPLPIC 288
>BP084072
Length = 457
Score = 196 bits (498), Expect = 1e-50
Identities = 93/95 (97%), Positives = 94/95 (98%)
Frame = -1
Query: 623 FEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKTRSP 682
FEDELKSLLPKEVESARAAYESGNPTI NKINECRSYPLYKFVREELGTELLTGEK+RSP
Sbjct: 457 FEDELKSLLPKEVESARAAYESGNPTISNKINECRSYPLYKFVREELGTELLTGEKSRSP 278
Query: 683 GEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
GEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC
Sbjct: 277 GEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 173
>CB826882
Length = 364
Score = 148 bits (373), Expect = 3e-36
Identities = 67/69 (97%), Positives = 69/69 (99%)
Frame = +2
Query: 649 IPNKINECRSYPLYKFVREELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGE 708
+PNKINECRSYPLYKFVR+ELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGE
Sbjct: 5 MPNKINECRSYPLYKFVRKELGTELLTGEKTRSPGEECDKLFTAICQGKIIDPLLECLGE 184
Query: 709 WNGAPLPIC 717
WNGAPLPIC
Sbjct: 185 WNGAPLPIC 211
>BP080571
Length = 338
Score = 55.8 bits (133), Expect(2) = 2e-16
Identities = 27/41 (65%), Positives = 29/41 (69%), Gaps = 3/41 (7%)
Frame = -2
Query: 680 RSPGEECDKLFTAICQ---GKIIDPLLECLGEWNGAPLPIC 717
+SPG + L Q GKIIDPLLECLGEWNGAPLPIC
Sbjct: 268 KSPGHQVRSLTNCSQQYATGKIIDPLLECLGEWNGAPLPIC 146
Score = 47.4 bits (111), Expect(2) = 2e-16
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3
Query: 655 ECRSYPLYKFVREELGTELLT 675
ECRSYPLYKFVREELGTELLT
Sbjct: 336 ECRSYPLYKFVREELGTELLT 274
Score = 41.6 bits (96), Expect = 4e-04
Identities = 18/21 (85%), Positives = 19/21 (89%)
Frame = -1
Query: 676 GEKTRSPGEECDKLFTAICQG 696
GEK+RSPGEE DKLFTAIC G
Sbjct: 272 GEKSRSPGEEFDKLFTAICHG 210
>CB826653
Length = 450
Score = 70.5 bits (171), Expect = 9e-13
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 26 DPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTI 66
DPL+WG AAE+++GSHL+EVKRMV EYRKP+V LGG+TLTI
Sbjct: 326 DPLNWGAAAEALRGSHLDEVKRMVEEYRKPLVMLGGKTLTI 448
>BP061895
Length = 246
Score = 32.7 bits (73), Expect(2) = 0.001
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3
Query: 706 LGEWNGAPLPIC 717
LGEWNGAPLPIC
Sbjct: 190 LGEWNGAPLPIC 155
Score = 26.2 bits (56), Expect(2) = 0.001
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 691 TAICQGKIIDPLLEC 705
T GKIIDPLLEC
Sbjct: 236 TQYATGKIIDPLLEC 192
>AV772637
Length = 551
Score = 28.1 bits (61), Expect = 5.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 325 ILDGSSYMKAAKKLHEVDPLQKPKQDRYAL 354
+ DGS Y++A K+ H +PL P +DR+ L
Sbjct: 521 VADGSHYIQALKQTH-YEPLVPPVRDRHLL 435
>TC14651 weakly similar to UP|Q42779 (Q42779) Alpha-carboxyltransferase
aCT-1 precursor , partial (22%)
Length = 1317
Score = 27.3 bits (59), Expect = 8.7
Identities = 19/70 (27%), Positives = 35/70 (49%)
Frame = +1
Query: 590 LMQKLRQVLVDHALVNGENEKDSKTSIFQKIATFEDELKSLLPKEVESARAAYESGNPTI 649
L+ L+ V +D LV E +DSK S + +ELK + KE+E + ++ + +
Sbjct: 397 LVNALKSVGLDVQLVKAEG-RDSKESEVSEYVPEIEELKKDIEKEIEISASSSDVKSKIE 573
Query: 650 PNKINECRSY 659
K+ C+ +
Sbjct: 574 QLKLGGCQGW 603
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,324,399
Number of Sequences: 28460
Number of extensions: 120926
Number of successful extensions: 567
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of query: 717
length of database: 4,897,600
effective HSP length: 97
effective length of query: 620
effective length of database: 2,136,980
effective search space: 1324927600
effective search space used: 1324927600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0033b.6