BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0028b.5
(1389 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8969 369 e-102
AV777886 293 2e-79
AV415593 280 8e-76
TC13619 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulatory... 143 4e-41
TC13885 weakly similar to PIR|T14734|T14734 NS5 protein - sorghu... 83 3e-16
TC8754 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulatory-... 64 1e-10
TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protei... 39 0.007
AV419050 37 0.016
TC10249 similar to UP|Q84LL9 (Q84LL9) Salt tolerance protein 3, ... 36 0.036
TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor,... 35 0.11
AW719663 34 0.14
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 34 0.14
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 34 0.18
BF177754 34 0.18
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 33 0.24
BU494286 33 0.24
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 33 0.31
BP040010 33 0.31
BP067368 33 0.40
TC18735 similar to UP|DSX_DROME (P23023) Doublesex protein, part... 32 0.52
>TC8969
Length = 892
Score = 369 bits (946), Expect = e-102
Identities = 182/185 (98%), Positives = 184/185 (99%)
Frame = +1
Query: 1205 EEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQLMDCG 1264
EEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYR EYSPGPKKLSIQLMDCG
Sbjct: 1 EEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRXEYSPGPKKLSIQLMDCG 180
Query: 1265 HDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQ 1324
HDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQ
Sbjct: 181 HDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQ 360
Query: 1325 VFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSNIRSSRALRFC 1384
VFNGLECKIACSSSKVSYVLDTEDVLYRKKS+RRILHPTSSC+EPAKSSNIRSSRALRFC
Sbjct: 361 VFNGLECKIACSSSKVSYVLDTEDVLYRKKSQRRILHPTSSCHEPAKSSNIRSSRALRFC 540
Query: 1385 KLFSS 1389
KLFSS
Sbjct: 541 KLFSS 555
>AV777886
Length = 540
Score = 293 bits (749), Expect = 2e-79
Identities = 149/179 (83%), Positives = 149/179 (83%), Gaps = 30/179 (16%)
Frame = +3
Query: 645 EFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDV 704
EFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDV
Sbjct: 3 EFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDV 182
Query: 705 VKAKNTEDVVNTENNSVKSGIVSVAESG------------------------------DS 734
VKAKNTEDVVNTENNSVKSGIVSVAESG DS
Sbjct: 183 VKAKNTEDVVNTENNSVKSGIVSVAESGGNPGVGAITMNPKHMSTSRNGSECMPLDQSDS 362
Query: 735 KAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSE 793
KAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSE
Sbjct: 363 KAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSE 539
>AV415593
Length = 416
Score = 280 bits (717), Expect = 8e-76
Identities = 138/138 (100%), Positives = 138/138 (100%)
Frame = +3
Query: 1008 ESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVE 1067
ESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVE
Sbjct: 3 ESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVE 182
Query: 1068 GDGMSLTISERFLQTVKPLAKYVPAALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSA 1127
GDGMSLTISERFLQTVKPLAKYVPAALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSA
Sbjct: 183 GDGMSLTISERFLQTVKPLAKYVPAALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSA 362
Query: 1128 KFNSSSAEKKWKASHDTG 1145
KFNSSSAEKKWKASHDTG
Sbjct: 363 KFNSSSAEKKWKASHDTG 416
>TC13619 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulatory-like
protein, partial (6%)
Length = 537
Score = 143 bits (361), Expect(3) = 4e-41
Identities = 87/142 (61%), Positives = 99/142 (69%), Gaps = 6/142 (4%)
Frame = +2
Query: 1025 DVSGSESADGEECSREEHE--DREHDN---KAESEGEAEGMVDAHDVEGDGMSLTISERF 1079
DVSGSESA G+EC +EEHE D EHD+ KAESEGEAEGM DA GD SL SERF
Sbjct: 29 DVSGSESA-GDECFQEEHEEDDIEHDDVDGKAESEGEAEGMCDAQG-GGDSSSLP*SERF 202
Query: 1080 LQTVKPLAKYVPA-ALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKW 1138
L +VKPL K+V A + E+ ++S+V G+D FY LFRLHQ LYERI SAK NS SAE KW
Sbjct: 203 LSSVKPLTKHVSAVSFAEEMKDSRVLNGNDDFYALFRLHQILYERILSAKINSMSAEMKW 382
Query: 1139 KASHDTGSTDQYDRFMNALYSL 1160
KA D S D Y RFMN + L
Sbjct: 383 KAK-DASSPDPYSRFMNGIVQL 445
Score = 38.9 bits (89), Expect(3) = 4e-41
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 1156 ALYSLLDGSSDNTKFEDDCRA 1176
ALY+LLDGS +N+KFED+CRA
Sbjct: 432 ALYNLLDGSVENSKFEDECRA 494
Score = 25.0 bits (53), Expect(3) = 4e-41
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 1179 GTQSYLLFTLDK 1190
G QSY+LFTLDK
Sbjct: 502 GNQSYVLFTLDK 537
>TC13885 weakly similar to PIR|T14734|T14734 NS5 protein - sorghum (fragment)
{Sorghum bicolor;} , partial (15%)
Length = 410
Score = 82.8 bits (203), Expect = 3e-16
Identities = 44/64 (68%), Positives = 50/64 (77%)
Frame = +3
Query: 1315 FSSQAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSN 1374
FSS AMEGLQ+FNGLEC+IACSSSKVSYVLDT+DVLYR +SKR++ AKSSN
Sbjct: 84 FSS*AMEGLQIFNGLECEIACSSSKVSYVLDTDDVLYRTRSKRKV----------AKSSN 233
Query: 1375 IRSS 1378
I S
Sbjct: 234 ISPS 245
>TC8754 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulatory-like
protein, partial (3%)
Length = 566
Score = 64.3 bits (155), Expect = 1e-10
Identities = 33/64 (51%), Positives = 43/64 (66%)
Frame = +2
Query: 1319 AMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSNIRSS 1378
AMEG++V NGLECKIAC+SS++SYVLDT D +R ++KRR T S ++S R
Sbjct: 32 AMEGVKVINGLECKIACNSSQISYVLDTPDFFFRPRTKRR----TPSATTTSRSRKDREE 199
Query: 1379 RALR 1382
R R
Sbjct: 200 RYRR 211
>TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protein) (IK
factor) (Cytokine IK), partial (6%)
Length = 492
Score = 38.5 bits (88), Expect = 0.007
Identities = 23/42 (54%), Positives = 27/42 (63%), Gaps = 1/42 (2%)
Frame = +1
Query: 354 PMKAEDRDRDRDRDRYRD-DGMKERDRECRERDRSTVVSNKE 394
P A+ RDRDRDR RD D +ERDRE R+RDR N+E
Sbjct: 301 PPSADPNRRDRDRDRDRDRDRDRERDRE-RDRDRDRERRNRE 423
Score = 37.0 bits (84), Expect = 0.021
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 356 KAEDRDRDRDRDRYRDDGMKERDRECRERDRS 387
+ DR+RDRDRDR R + +ERD E + R+R+
Sbjct: 367 RERDRERDRDRDRERRNRERERDEENKARERA 462
Score = 33.1 bits (74), Expect = 0.31
Identities = 18/42 (42%), Positives = 25/42 (58%), Gaps = 6/42 (14%)
Frame = +1
Query: 359 DRDRDRDRDRYRDDGMKERDRE------CRERDRSTVVSNKE 394
DR+RDR+RDR RD + R+RE RER R ++ +E
Sbjct: 364 DRERDRERDRDRDRERRNRERERDEENKARERARLEKLAERE 489
>AV419050
Length = 409
Score = 37.4 bits (85), Expect = 0.016
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 359 DRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVS 396
DRDRDRDR+R R+ +ERDR R+RDR S + S
Sbjct: 10 DRDRDRDRERRRE--KEERDRGDRDRDRDRTRSKRSRS 117
>TC10249 similar to UP|Q84LL9 (Q84LL9) Salt tolerance protein 3, partial
(35%)
Length = 1096
Score = 36.2 bits (82), Expect = 0.036
Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 356 KAEDRDRDRDRDRYRD-DGMKERDRE 380
K D+DRDR+RDRYRD D +ER RE
Sbjct: 256 KHRDKDRDRERDRYRDRDSDRERSRE 333
>TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor, partial
(74%)
Length = 1591
Score = 34.7 bits (78), Expect = 0.11
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +2
Query: 155 TVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGR-------D 207
T S DP ++ + + R E+E+ R +E+D +E + WER R
Sbjct: 119 TASRQREDPCREQGEDERQPWQPRREREEHGREREEEDEKESRRPSWERKERTREWRRES 298
Query: 208 HEHDGGQYRERLSHKRKSDR 227
E D + R S + +SDR
Sbjct: 299 EERDTPRRPHRQSEEEESDR 358
>AW719663
Length = 474
Score = 34.3 bits (77), Expect = 0.14
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +1
Query: 958 NFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVDADDEGEESPHRSSDDS 1017
N V E + +DA HK + D +++S+ EQ+ + D + + E H DD+
Sbjct: 115 NPLVEETTVVDARHKEQ--DEESEHESKTEEQINLDEVNSVDENEPEHKPEEEHIKLDDA 288
Query: 1018 ENASEN-VDVSGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVEGD 1069
EN V+ E ++ + + + E EGE D+E +
Sbjct: 289 NGVDENEVENKPEEHIKLDDANGVDENSEHSQDLVEHEGEGSSENARTDIESE 447
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 34.3 bits (77), Expect = 0.14
Identities = 17/39 (43%), Positives = 22/39 (55%), Gaps = 1/39 (2%)
Frame = +3
Query: 997 ENDVDADDEGEESPHRSSDD-SENASENVDVSGSESADG 1034
++D D DD+GEE DD E SE V+V G + A G
Sbjct: 303 DDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGKDGAKG 419
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 997 ENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEH---EDREHDNKAES 1053
E + D +DE E++PH + S E+ E +GEE EE ED + + +
Sbjct: 342 EEEEDEEDEEEQTPHPTRGRSR--VEHAQEEDEEEENGEEEEEEEEVVVEDEQGNEDEDE 515
Query: 1054 EGEAEGMV 1061
+ E EG+V
Sbjct: 516 DEEEEGVV 539
>BF177754
Length = 416
Score = 33.9 bits (76), Expect = 0.18
Identities = 17/55 (30%), Positives = 32/55 (57%), Gaps = 2/55 (3%)
Frame = +2
Query: 176 LLRAEKEQRRRVEKEKDHRE--DGKRDWERDGRDHEHDGGQYRERLSHKRKSDRK 228
LL+ EK + ++ +K+K +E + K E+DG+D +H + +E+ K+K K
Sbjct: 32 LLKKEKRREKKHKKDKKDKEKKESKEKREKDGKDGKHKEKEKKEKHRDKKKDKDK 196
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 33.5 bits (75), Expect = 0.24
Identities = 33/133 (24%), Positives = 56/133 (41%), Gaps = 4/133 (3%)
Frame = +2
Query: 942 EREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVD 1001
E ++ + GD ++D E G++ G +G GGD ++D D
Sbjct: 68 EDDDDDAPGGGDDDDDEEDEEEEGGVEGG-RGGGGDPDD---------------DDDDDD 199
Query: 1002 ADDEGEESPHRSSDDSENASENVDVSGSESADGEECSRE-EHEDREHDNKAESEGEAEGM 1060
DDE EE ++ + +E + +A+ EE S + E E+ E D+ +GE G+
Sbjct: 200 DDDEEEE------EEEDLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDNDDGEKAGV 361
Query: 1061 VDAH---DVEGDG 1070
D +G G
Sbjct: 362 PSKRKRSDKDGSG 400
>BU494286
Length = 198
Score = 33.5 bits (75), Expect = 0.24
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 169 DPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKS 225
+ D+ R E+E+R R ++++ R R R EHDGG YR+R H R S
Sbjct: 15 EKDYGRDREGRERERRDR-DRDRGRRRSRSRSRSRSRDRKEHDGGDYRKR--HARSS 176
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 33.1 bits (74), Expect = 0.31
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Frame = -2
Query: 919 NGATTGGTEVHRYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSGLDAGHK---GKG 975
N ATT G + Q + +H +E E+G GD ++D + D + G G
Sbjct: 680 NMATTKGET--KSQSEDKQH-DAEGEDGN-DDEGDEDDDGDGPFGEGEEDLSSEDGAGYG 513
Query: 976 GDMSQKYQSRHGEQVCCEAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGE 1035
+ + K S+ E ++ GE+ +D E+ ++ + E GE
Sbjct: 512 NNSNNKSNSKKAP----EGGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGE 345
Query: 1036 ECSREEHEDREHDNKAESEGEAEGM 1060
+ E E+ +++++ E E + E +
Sbjct: 344 DEEEEGVEEEDNEDEEEDEEDEEAL 270
>BP040010
Length = 567
Score = 33.1 bits (74), Expect = 0.31
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 358 EDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSN 392
+DR+RDRDRDR R+ G + R RDR V +N
Sbjct: 125 QDRERDRDRDRERERGSE------RGRDRDRVTTN 211
Score = 31.2 bits (69), Expect = 1.2
Identities = 23/59 (38%), Positives = 29/59 (48%), Gaps = 1/59 (1%)
Frame = +2
Query: 161 RDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERD-GRDHEHDGGQYRER 218
++PS+ D D LR K R K +R DGK+D ERD RD E + G R R
Sbjct: 26 KNPSMSHRDSDSK---LRHSKFDRE--PSPKRYRRDGKQDRERDRDRDRERERGSERGR 187
Score = 28.5 bits (62), Expect = 7.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 361 DRDRDRDRYRDDGMKERDRECRERDR 386
DR+ RYR DG ++R+R+ R+RDR
Sbjct: 83 DREPSPKRYRRDGKQDRERD-RDRDR 157
>BP067368
Length = 322
Score = 32.7 bits (73), Expect = 0.40
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Frame = -2
Query: 356 KAEDRDRDRDRDRYRD----DGMKERDRECRERDR 386
+ DRDRDR+R+R RD + + +R RE RERDR
Sbjct: 102 RTRDRDRDRERERDRDVTEIEDVTDRGRE-RERDR 1
Score = 31.6 bits (70), Expect = 0.89
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = -2
Query: 353 KPMKAEDRDRDRDRDRYRD-----DGMKERDRECRERDRSTVVSNKE 394
+P EDR+ DRDR++ R+ DG +ER RE R DR+ ++E
Sbjct: 264 EPRVREDRNVDRDREKSRERVKDKDGERERSRE-RSSDRARDRDHRE 127
Score = 31.6 bits (70), Expect = 0.89
Identities = 30/84 (35%), Positives = 40/84 (46%), Gaps = 2/84 (2%)
Frame = -2
Query: 137 RSAMPTVRQAHVVKRERTTVSHCDRDPSVDR-PDPDHDRGLLRAEKEQRRRVEKEKDHRE 195
RS P VR+ V R DR+ S +R D D +R R R R ++DHRE
Sbjct: 273 RSEEPRVREDRNVDR--------DREKSRERVKDKDGERERSRERSSDRAR---DRDHRE 127
Query: 196 D-GKRDWERDGRDHEHDGGQYRER 218
D RD +R RD + D + R+R
Sbjct: 126 DRHHRDRDRT-RDRDRDRERERDR 58
Score = 30.0 bits (66), Expect = 2.6
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2
Query: 359 DRDRDRDRDRYRDDGMKERDRECRE 383
DRDR RDRDR R+ +ERDR+ E
Sbjct: 111 DRDRTRDRDRDRE---RERDRDVTE 46
Score = 28.9 bits (63), Expect = 5.8
Identities = 25/84 (29%), Positives = 37/84 (43%), Gaps = 3/84 (3%)
Frame = -2
Query: 131 SVLRDRRSAMPTVRQAHVVK---RERTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRV 187
+V RDR + V+ + RER++ DRD DR D DR +++ R
Sbjct: 240 NVDRDREKSRERVKDKDGERERSRERSSDRARDRDHREDRHHRDRDR-----TRDRDRDR 76
Query: 188 EKEKDHREDGKRDWERDGRDHEHD 211
E+E+D D GR+ E D
Sbjct: 75 ERERDRDVTEIEDVTDRGRERERD 4
Score = 28.5 bits (62), Expect = 7.6
Identities = 18/42 (42%), Positives = 25/42 (58%), Gaps = 3/42 (7%)
Frame = -2
Query: 356 KAEDRDRDRD--RDRYRDDGMKERDRE-CRERDRSTVVSNKE 394
++ DR RDRD DR+ D + RDR+ RER+R V+ E
Sbjct: 165 RSSDRARDRDHREDRHHRDRDRTRDRDRDRERERDRDVTEIE 40
>TC18735 similar to UP|DSX_DROME (P23023) Doublesex protein, partial (4%)
Length = 784
Score = 32.3 bits (72), Expect = 0.52
Identities = 20/49 (40%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Frame = -2
Query: 170 PDHDRGLLRAEKEQRRRVEKEKDHREDGKRDW-ERDGRDHEHDGGQYRE 217
PDH GLLRA R+RVE ++ E+ W E+DG+ + H G E
Sbjct: 246 PDHREGLLRA----RQRVEVDEFE*EEDTLGWKEKDGKPNHHR*GGKEE 112
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,837,851
Number of Sequences: 28460
Number of extensions: 289659
Number of successful extensions: 1404
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of query: 1389
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1287
effective length of database: 1,994,680
effective search space: 2567153160
effective search space used: 2567153160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0028b.5