BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0018.6
(456 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16331 similar to GB|AAN64534.1|24797044|BT001143 At5g12410/At5... 620 e-178
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 42 2e-04
CN825654 41 4e-04
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 40 6e-04
TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%) 37 0.005
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 36 0.015
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 34 0.044
TC15714 weakly similar to UP|Q9LU96 (Q9LU96) Genomic DNA, chromo... 34 0.057
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 34 0.057
AI967639 33 0.075
TC14611 similar to UP|Q8LPB2 (Q8LPB2) Glycine-rich RNA binding p... 32 0.22
BI420796 31 0.37
TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial ... 31 0.37
TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) prec... 31 0.48
BP040276 30 0.63
TC9362 similar to PIR|F86340|F86340 protein F2D10.34 [imported] ... 30 0.63
AW720001 30 0.63
BP038231 30 0.63
AV418628 30 0.83
BP056675 30 0.83
>TC16331 similar to GB|AAN64534.1|24797044|BT001143 At5g12410/At5g12410
{Arabidopsis thaliana;}, partial (42%)
Length = 932
Score = 620 bits (1598), Expect = e-178
Identities = 310/310 (100%), Positives = 310/310 (100%)
Frame = +2
Query: 126 LDSSVDEHAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDED 185
LDSSVDEHAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDED
Sbjct: 2 LDSSVDEHAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDED 181
Query: 186 AGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGD 245
AGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGD
Sbjct: 182 AGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGD 361
Query: 246 NDNIKTKTANELPVVKQCCKTNVPVQDSSNKVEKSIDTLIDEELRELGDKKKRRFVKLES 305
NDNIKTKTANELPVVKQCCKTNVPVQDSSNKVEKSIDTLIDEELRELGDKKKRRFVKLES
Sbjct: 362 NDNIKTKTANELPVVKQCCKTNVPVQDSSNKVEKSIDTLIDEELRELGDKKKRRFVKLES 541
Query: 306 GCNGVVFIQMRKKDGDKSPKDIVHRIVTSAASTRKHMSRFILRMLPIEVSCYASKEEISR 365
GCNGVVFIQMRKKDGDKSPKDIVHRIVTSAASTRKHMSRFILRMLPIEVSCYASKEEISR
Sbjct: 542 GCNGVVFIQMRKKDGDKSPKDIVHRIVTSAASTRKHMSRFILRMLPIEVSCYASKEEISR 721
Query: 366 AIKPLVEQNFPVPTQKPLKFAVMYEARANTGIDRMEIIDAVAKSVPGPHKVDLKNPDKTI 425
AIKPLVEQNFPVPTQKPLKFAVMYEARANTGIDRMEIIDAVAKSVPGPHKVDLKNPDKTI
Sbjct: 722 AIKPLVEQNFPVPTQKPLKFAVMYEARANTGIDRMEIIDAVAKSVPGPHKVDLKNPDKTI 901
Query: 426 VVEIARTVCL 435
VVEIARTVCL
Sbjct: 902 VVEIARTVCL 931
Score = 50.8 bits (120), Expect = 5e-07
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 91 ADSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKP- 149
A D D DE+ + EGDEANGDK K+DSSV+E+AG + +G G E P
Sbjct: 134 AKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAG-HDNEIG--GKENPH 304
Query: 150 KLDSSVDENAGIGGKTEGDEAKGD 173
K+D D +A G KT+ +E D
Sbjct: 305 KID---DVHAAAGNKTDDNEGDND 367
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 42.0 bits (97), Expect = 2e-04
Identities = 39/165 (23%), Positives = 71/165 (42%), Gaps = 9/165 (5%)
Frame = +2
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKL 151
+S + SGD++DD++ GE D+ + D D+ G G+ + E +
Sbjct: 2 NSRTRMSGDEDDDDD------GEDDDGDEDDD-------DDAPGGGD---DDDDEEDEEE 133
Query: 152 DSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEK---------AEGDEANGDKM 202
+ V+ G GG + D+ D+ D +E+ +G + AE +EA+ D
Sbjct: 134 EGGVEGGRGGGGDPDDDDDDDDDD---DEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFE 304
Query: 203 PKMDSSVNENAGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGDND 247
P+ D ++N D E G + K D + + +DD D++
Sbjct: 305 PEEDEG-DDNDNDDGEKAGVPSKRKRSDKDGSGDDDSDDGGEDDE 436
Score = 37.4 bits (85), Expect = 0.005
Identities = 26/93 (27%), Positives = 41/93 (43%), Gaps = 13/93 (13%)
Frame = +2
Query: 92 DSDSSSSGDDEDDEEEVQ-------------VQVGEGDEANGDKKLKLDSSVDEHAGIGE 138
D D DD+DDEEE + V E +EA+ D + + D D GE
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDNDDGE 349
Query: 139 KAVGANGAEKPKLDSSVDENAGIGGKTEGDEAK 171
KA + ++ D S D+++ GG+ + +K
Sbjct: 350 KAGVPSKRKRSDKDGSGDDDSDDGGEDDERPSK 448
>CN825654
Length = 580
Score = 41.2 bits (95), Expect = 4e-04
Identities = 45/171 (26%), Positives = 74/171 (42%), Gaps = 24/171 (14%)
Frame = +2
Query: 99 GDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKLDSSVDEN 158
G+DEDD+EE GE +E D+++ + + + G K GA+ D+ DEN
Sbjct: 68 GEDEDDDEEKSELTGEDEE---DEQVVSFAGKKKPSKGGSKKGGASLFTASAFDAIDDEN 238
Query: 159 AGIGGKTEGDEA----KGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAG 214
G G + E +E G +KP S + A D+ +GD MD+SV++
Sbjct: 239 DG-GEEQEEEEPVVSFAGKKKPSKGSKKGGGSLFNAAAFDDDNDGD---VMDNSVDDGRD 406
Query: 215 HDNEIG-------GKENPHK-------------IDDVHAAAGNKTDDNEGD 245
++++ GK+ K DDV A +K +D++ D
Sbjct: 407 GNDDVDEPVIAFTGKKKSSKGSKKGGALFSAASFDDVDEAKDDKEEDDDED 559
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 40.4 bits (93), Expect = 6e-04
Identities = 28/125 (22%), Positives = 55/125 (43%), Gaps = 5/125 (4%)
Frame = -2
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEK--- 148
D + G+D +D+E + G+G G++ D S ++ AG G + + ++K
Sbjct: 638 DKQHDAEGEDGNDDEGDEDDDGDGPFGEGEE----DLSSEDGAGYGNNSNNKSNSKKAPE 471
Query: 149 --PKLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMD 206
P + +EN +G++ + D+ D ++D G E+ EG E ++ + D
Sbjct: 470 GGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEED 291
Query: 207 SSVNE 211
E
Sbjct: 290 EEDEE 276
Score = 30.4 bits (67), Expect = 0.63
Identities = 22/83 (26%), Positives = 35/83 (41%)
Frame = -2
Query: 166 EGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENP 225
+G++ +GDE +D G G EG+E D S + AG+ N K N
Sbjct: 611 DGNDDEGDE---------DDDGDGPFGEGEE---------DLSSEDGAGYGNNSNNKSNS 486
Query: 226 HKIDDVHAAAGNKTDDNEGDNDN 248
K + AG ++N D ++
Sbjct: 485 KKAPEGGPGAGAGPEENGEDEED 417
>TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%)
Length = 1231
Score = 37.4 bits (85), Expect = 0.005
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 10/190 (5%)
Frame = +3
Query: 39 QGVFITCEGGREHQASREALNILESFYEDLVDGEHLSVKELLNRPKNKK-------ITFA 91
+GVF +E + +E + + E F + V E KE ++ KK + +
Sbjct: 417 RGVFDFLGKKKEEEKPQEEVIVTE-FEKVKVSEEPEKKKEEVDHEGEKKHSTLLEKLHRS 593
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKL 151
DS SSSS D+E+ +E GE + K+ K S DE+ + + A+ EK
Sbjct: 594 DSSSSSSSDEEEGKE------GEEKKKKKKKEKKEVKSTDENTSVPVEVDPAHAEEKKGF 755
Query: 152 DSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGD---EANGDKMPKMDSS 208
+ E GK +EA P S + + E AE E +K+P
Sbjct: 756 LDKIKEKLPGHGKKTTEEATTSPPPPPPSVSETTSTPHEGAEKKGILEKIKEKIPGYHPK 935
Query: 209 VNENAGHDNE 218
E D E
Sbjct: 936 TEEEGTKDKE 965
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 35.8 bits (81), Expect = 0.015
Identities = 22/85 (25%), Positives = 41/85 (47%), Gaps = 4/85 (4%)
Frame = +3
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAV----GANGAE 147
D++ D+E+D+E+ + D+ +G+++ D +E G E V GA GA
Sbjct: 246 DNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGKDGAKGAA 425
Query: 148 KPKLDSSVDENAGIGGKTEGDEAKG 172
++ GIG ++ +EA+G
Sbjct: 426 AQTTKAAAAMCVGIGSFSDPNEAQG 500
Score = 27.3 bits (59), Expect = 5.4
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 164 KTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKE 223
+T+ +E + D++ + D D+D + +G+E D D E + E+ GK+
Sbjct: 240 QTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDD----DDDEEEEGSEEVEVEGKD 407
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 34.3 bits (77), Expect = 0.044
Identities = 52/276 (18%), Positives = 93/276 (32%)
Frame = -3
Query: 93 SDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKLD 152
+ SSS ++EDD+ QV+ +E + S +E E+ A P
Sbjct: 842 ASSSSESEEEDDQPLSQVKHAAAEEE--------ELSSEEEGSSEEEEEDETTAPAPPAA 687
Query: 153 SSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNEN 212
++ K E + D + DS D D+ A N P +++
Sbjct: 686 TTSHT------KPPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQT 525
Query: 213 AGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGDNDNIKTKTANELPVVKQCCKTNVPVQD 272
H + P K AA N N GD+ K K D
Sbjct: 524 QTHKPKAQPSPAPAKSAAKRAAESNA---NAGDSKRAKKKAV-----------------D 405
Query: 273 SSNKVEKSIDTLIDEELRELGDKKKRRFVKLESGCNGVVFIQMRKKDGDKSPKDIVHRIV 332
S+ D ++E+ ++ G+ K++F +L S + + + K D + +
Sbjct: 404 SAPAAAAGSDEEMEEDGKKSGNDSKKQFTRLWSDEDEIAIL--------KGLADFISKTG 249
Query: 333 TSAASTRKHMSRFILRMLPIEVSCYASKEEISRAIK 368
F++R L + + K+++ R K
Sbjct: 248 NDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKK 141
>TC15714 weakly similar to UP|Q9LU96 (Q9LU96) Genomic DNA, chromosome 3, P1
clone: MPE11, partial (26%)
Length = 1157
Score = 33.9 bits (76), Expect = 0.057
Identities = 44/154 (28%), Positives = 67/154 (42%), Gaps = 5/154 (3%)
Frame = -3
Query: 53 ASREALNILESFYEDLVDGEHLSVKELLNRPKNKKITFADSDSSSSGDDEDDEEEVQVQV 112
+S E+ NIL D +H E P ++T D+ G+ DEE +V
Sbjct: 630 SSGESPNILAQASHLGEDEKH----EHRESPVRDRVTARDNHEER-GEVVRDEE----RV 478
Query: 113 GEGDEAN-----GDKKLKLDSSVDEHAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEG 167
G G E++ GD+ + G+ E+ VG G E D E+ G G EG
Sbjct: 477 GGGRESDVV*QIGDEV----GGAEIKDGVLERGVG--GGETGVCDGGDAEDDGGGAVEEG 316
Query: 168 DEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDK 201
DEA L + V E+ + E+ +G+E +G+K
Sbjct: 315 DEAAA*FGSNLGAPVAENDEVAEEVDGEE-HGEK 217
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 33.9 bits (76), Expect = 0.057
Identities = 36/111 (32%), Positives = 45/111 (40%)
Frame = -2
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKL 151
D S DD DD E EGD D++ + D VD AG VGA+G
Sbjct: 422 DDGSEKLSDDVDDTAE------EGD-VTADEEAEGDGGVDVAAG----DVGADG------ 294
Query: 152 DSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKM 202
DE G GDEA G + V D+G G + DE GD++
Sbjct: 293 --DGDEEGECVGDGGGDEAGGGGGAVVGEFVVGDSGTGAGEDEDE-GGDEL 150
Score = 26.9 bits (58), Expect = 7.0
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = -2
Query: 177 KLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENPHKIDDVHAAAG 236
K +S E GE+ GD+ + K+ V++ A + ++ E V AAG
Sbjct: 476 KTESRYSESGDEGEEQGGDDGS----EKLSDDVDDTA-EEGDVTADEEAEGDGGVDVAAG 312
Query: 237 NKTDDNEGDND 247
+ D +GD +
Sbjct: 311 DVGADGDGDEE 279
>AI967639
Length = 335
Score = 33.5 bits (75), Expect = 0.075
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 67 DLVDGEHLSVKELLNRPKNKKITFADSDSSSSGDDEDDEEEVQVQVGEGDEAN-GDKKLK 125
D + GE + +E L + K ++ D SSS GD+ED+EE+ +GDE N D++
Sbjct: 16 DDIVGEVVYDEEYLKKRKQRR----DISSSSEGDEEDEEED------QGDEYNLEDEEED 165
Query: 126 LDSSVDEHAGIGEKAVGANGAEKPK 150
D D+ I E + ++KP+
Sbjct: 166 DDDDDDDDLSISED----SDSDKPR 228
>TC14611 similar to UP|Q8LPB2 (Q8LPB2) Glycine-rich RNA binding protein,
partial (20%)
Length = 760
Score = 32.0 bits (71), Expect = 0.22
Identities = 23/83 (27%), Positives = 35/83 (41%), Gaps = 17/83 (20%)
Frame = +3
Query: 135 GIGEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAK---------GDEK--------PK 177
G E G G KP ++ +G GG++E +E K G E+ P+
Sbjct: 84 GGSEYESGYGGGRKPSYGE--EQGSGYGGRSEYEEKKPSYGRSNYEGQEEVEYGRERPPR 257
Query: 178 LDSSVDEDAGIGEKAEGDEANGD 200
LD D++ G K GD+ + D
Sbjct: 258 LDDDDDDNEGYARKKYGDDGSDD 326
Score = 27.3 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 18/38 (46%)
Frame = +3
Query: 137 GEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAKGDE 174
G++ V P+LD D+N G K GD+ D+
Sbjct: 216 GQEEVEYGRERPPRLDDDDDDNEGYARKKYGDDGSDDD 329
>BI420796
Length = 552
Score = 31.2 bits (69), Expect = 0.37
Identities = 20/86 (23%), Positives = 38/86 (43%), Gaps = 7/86 (8%)
Frame = -2
Query: 94 DSSSSGDDEDDEEEVQVQVGE-------GDEANGDKKLKLDSSVDEHAGIGEKAVGANGA 146
++ S G+ + E+ + +G+ G+ + + ++ E G G AVGA G
Sbjct: 455 EARSEGEGDRVEQPTPIVLGDTGRDGG*GESSEVGHDVVVEGGARERVGGG--AVGAEGD 282
Query: 147 EKPKLDSSVDENAGIGGKTEGDEAKG 172
+ + +E G+G EG E +G
Sbjct: 281 PSEEEEDGEEEREGVGSVEEGSEERG 204
Score = 29.3 bits (64), Expect = 1.4
Identities = 28/114 (24%), Positives = 39/114 (33%), Gaps = 5/114 (4%)
Frame = -2
Query: 113 GEGDEANGDKKLKL-----DSSVDEHAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEG 167
GEGD + L D E + +G V GA + +GG G
Sbjct: 440 GEGDRVEQPTPIVLGDTGRDGG*GESSEVGHDVVVEGGARER-----------VGGGAVG 294
Query: 168 DEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGG 221
A+GD + + +E G+G EG E G + EN GG
Sbjct: 293 --AEGDPSEEEEDGEEEREGVGSVEEGSEERGADPVEQGGCSGENGSSRRCCGG 138
>TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (4%)
Length = 493
Score = 31.2 bits (69), Expect = 0.37
Identities = 27/95 (28%), Positives = 45/95 (46%), Gaps = 2/95 (2%)
Frame = -2
Query: 107 EVQVQVGEGDEANGDKKLK-LDSSVDEHAGI-GEKAVGANGAEKPKLDSSVDENAGIGGK 164
+++ GE + NG+ + D +V + AG ++AV E+P + +++ G G
Sbjct: 492 DIEPNSGENERNNGNNPERGEDETVIDGAGEDNDRAVAEEEEEEPGEEDGEEDDDGDGVP 313
Query: 165 TEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANG 199
EGDE DE+ +E A + AEG A G
Sbjct: 312 DEGDEE--DEEEDHGVVAEEVAEVVLHAEGGFAEG 214
>TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) precursor,
partial (51%)
Length = 1566
Score = 30.8 bits (68), Expect = 0.48
Identities = 25/107 (23%), Positives = 45/107 (41%), Gaps = 21/107 (19%)
Frame = +1
Query: 47 GGREH--------QASREALNILESF----YEDLVDGEHLSVKELLNRPKNKK------- 87
GGR H Q E +IL F + + + +H + K+L + ++
Sbjct: 292 GGRRHGQHHQESEQEEEEGGSILSGFGAEFLQQVFNIDHDTAKQLQSPDDQRRQIVKVEG 471
Query: 88 --ITFADSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDE 132
++F +S+ +DE+DE+E Q Q G +G + + DE
Sbjct: 472 DDLSFISPESADEDEDEEDEDEDQEQHGRHSRPSGRRTRRPSREEDE 612
>BP040276
Length = 556
Score = 30.4 bits (67), Expect = 0.63
Identities = 25/105 (23%), Positives = 42/105 (39%), Gaps = 4/105 (3%)
Frame = +1
Query: 127 DSSVDEHAGIGEKAVGANGAEKPKLD--SSVDENAGIGGKTEGDEAKGDEKP--KLDSSV 182
DSS A E ANG ++P + S+ ++ +G + +K P L SV
Sbjct: 223 DSSAVNSAPAEETENNANGGKRPAWNKPSNAASSSVMGADSWPALSKSAHSPAKSLPESV 402
Query: 183 DEDAGIGEKAEGDEANGDKMPKMDSSVNENAGHDNEIGGKENPHK 227
+ + G P V +NAG +N + ++ P+K
Sbjct: 403 KGSVDSSSPSPNLQGTGSATPSPQRQVRDNAGVNNTLPTQQKPYK 537
>TC9362 similar to PIR|F86340|F86340 protein F2D10.34 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(58%)
Length = 591
Score = 30.4 bits (67), Expect = 0.63
Identities = 30/109 (27%), Positives = 43/109 (38%), Gaps = 4/109 (3%)
Frame = -1
Query: 116 DEANGDKKLKLDSSVDE-HAGIGEKAVGANGAEKPKLDSSVDENAGIGGKTEGDEAKGDE 174
D +G + + D ++ E H G G + +GAE LD+ V G GGK G
Sbjct: 369 DFVSGGELRQTDRAIGEFHRGFGGRGELRDGAEDLLLDAFV----GSGGKRRWKRRSG-- 208
Query: 175 KPKLDSSVDEDAGIGEK---AEGDEANGDKMPKMDSSVNENAGHDNEIG 220
G GE G +GD+ D S E+ D+E+G
Sbjct: 207 ------------GGGEA*APETGAAGDGDQAEDADESAEESGEDDDEVG 97
>AW720001
Length = 542
Score = 30.4 bits (67), Expect = 0.63
Identities = 41/176 (23%), Positives = 74/176 (41%), Gaps = 4/176 (2%)
Frame = +3
Query: 92 DSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKPKL 151
DSD S SGD+++ + + + +A+ KK D+ D G +K K
Sbjct: 15 DSDGSDSGDEKEKPAKKEPKKDLPSKASTSKKKPRDADED----------GKKKKQKKKK 164
Query: 152 DSSVDENAGIG----GKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDS 207
D + + A G + E + K P + S D +GEK + + +K P
Sbjct: 165 DPNAPKRAMSGFMFFSQMERENLK-KTNPGI-SFTDVGRVLGEKWK-KMSTEEKEPYEVK 335
Query: 208 SVNENAGHDNEIGGKENPHKIDDVHAAAGNKTDDNEGDNDNIKTKTANELPVVKQC 263
+ + + +EI G +NP ++ +GN++D G +I++ A L +C
Sbjct: 336 ARADKKRYMDEISGYKNP---QPMNVDSGNESDSP*GFCSDIESLLACPLLATLRC 494
>BP038231
Length = 513
Score = 30.4 bits (67), Expect = 0.63
Identities = 34/121 (28%), Positives = 45/121 (37%)
Frame = -3
Query: 90 FADSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKP 149
F+D D G ++DDEE DE N + L D DE+ G +V P
Sbjct: 448 FSDDDIEMDGTEDDDEEYFD------DEYNPRRPLYYD---DEYRAPGPVSVAFG---HP 305
Query: 150 KLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGDKMPKMDSSV 209
DS DE+ D DAG+G A+ D+A+G K V
Sbjct: 304 AADSEEDEDV--------------------EEYDFDAGVG--ADDDDADGAS*QKYGIPV 191
Query: 210 N 210
N
Sbjct: 190 N 188
>AV418628
Length = 309
Score = 30.0 bits (66), Expect = 0.83
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Frame = +2
Query: 91 ADSDSSSSGDDEDDEEEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGAEKP- 149
+DSDSSS + + V G + G KK K S D + + + + +++P
Sbjct: 17 SDSDSSSDSSSSGSDSDRPGVVRSGKKKGGSKKSKKSSDSDSSS---DSSSSGSDSDRPG 187
Query: 150 ------KLDSSVDENAGIGGKTEGDEAKGDEKPKLDSS 181
K D S D ++G G G +K + S
Sbjct: 188 VVRTGAKKDESSDSSSGSDSDRPGVVRTGAKKDESSDS 301
>BP056675
Length = 520
Score = 30.0 bits (66), Expect = 0.83
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Frame = -2
Query: 91 ADSDSSSSGDDEDDE----EEVQVQVGEGDEANGDKKLKLDSSVDEHAGIGEKAVGANGA 146
AD +DED + EE Q Q+ + E N L D A A +N A
Sbjct: 489 ADMMDEQEMEDEDADVNYREEPQTQMNDDVEENAHGLLAAAGLEDSDAEEETAAPSSNIA 310
Query: 147 EKPKLDSSVDENAGIGGKTEGDEAKGDEKPKLDSSVDEDAGIGEKAEGDEANGD 200
+ + S D++ + + P ++SVD GE + D+ NGD
Sbjct: 309 RRRQALSESDDD---------EPLQRQSSPVRENSVDMQLSDGEIRDEDKTNGD 175
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.308 0.131 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,283,364
Number of Sequences: 28460
Number of extensions: 76539
Number of successful extensions: 641
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of query: 456
length of database: 4,897,600
effective HSP length: 93
effective length of query: 363
effective length of database: 2,250,820
effective search space: 817047660
effective search space used: 817047660
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0018.6