BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012c.1
(943 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8626 89 2e-18
BP038344 86 4e-17
TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snR... 78 7e-15
TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subun... 77 2e-14
AV780136 67 1e-11
TC12572 similar to PIR|T46032|T46032 WD-40 repeat regulatory pro... 67 1e-11
TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG... 62 4e-10
TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial... 61 9e-10
AV407645 58 6e-09
TC13023 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Fragm... 57 1e-08
TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-bi... 57 2e-08
TC19491 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Ar... 54 9e-08
TC16695 homologue to UP|Q94KS2 (Q94KS2) TGF-beta receptor-intera... 54 1e-07
TC16458 similar to UP|O48679 (O48679) F3I6.5 protein, partial (20%) 53 2e-07
TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5,... 52 3e-07
TC9407 weakly similar to UP|TAF5_YEAST (P38129) Transcription in... 50 2e-06
BP044070 49 3e-06
TC10217 homologue to UP|AAQ54906 (AAQ54906) Cell cycle switch pr... 48 6e-06
BP050721 47 1e-05
TC11250 homologue to UP|AAQ72359 (AAQ72359) B-type cell cycle sw... 46 2e-05
>TC8626
Length = 572
Score = 89.4 bits (220), Expect = 2e-18
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 900 MMASNSEAPFHNARSMLLEAKQSKRSAERSDTGYVRPKKKKKTT 943
MMASNSEAPFHNARSMLLEAKQSKRSAERSDTGYVRPKKKKKTT
Sbjct: 3 MMASNSEAPFHNARSMLLEAKQSKRSAERSDTGYVRPKKKKKTT 134
>BP038344
Length = 525
Score = 85.5 bits (210), Expect = 4e-17
Identities = 39/120 (32%), Positives = 70/120 (57%)
Frame = +2
Query: 102 TLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSG 161
TL H AV ++++ G++LAS S D +I+W + L RL GH + ++D+ + S
Sbjct: 83 TLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLAWSSDS 262
Query: 162 KKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYGIK 221
+ S+S D+ LR+WD C++ + GH ++ V+ +P Y+V+GS D+ +R + +K
Sbjct: 263 HYICSASDDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVWEVK 442
Score = 76.6 bits (187), Expect = 2e-14
Identities = 36/123 (29%), Positives = 63/123 (50%)
Frame = +2
Query: 575 FKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVK 634
++ +L H V C+ S+DG L+ + S DK L IW L H + + +
Sbjct: 68 YRHLKTLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLA 247
Query: 635 FVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIR 694
+ +HY+ S DR + WDA + + TL GH ++C+ + + ++IV+GS D ++R
Sbjct: 248 WSSDSHYICSASDDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVR 427
Query: 695 RWD 697
W+
Sbjct: 428 VWE 436
Score = 67.0 bits (162), Expect = 1e-11
Identities = 43/150 (28%), Positives = 68/150 (44%), Gaps = 1/150 (0%)
Frame = +2
Query: 536 NVRTMKMNDD-VLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDIS 594
+++T+ +D V V S D +A A LD T+ + T L GH + + S
Sbjct: 74 HLKTLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLAWS 253
Query: 595 SDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYW 654
SD I + S D+ L+IW GDC K+L H +V V F P+++Y+ S D V W
Sbjct: 254 SDSHYICSASDDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVW 433
Query: 655 DADKFERLLTLEGHHADIWCLAISNRGDFI 684
+ + T+ H + + + G I
Sbjct: 434 EVKTGRCIHTIIAHTMPVTSVHFNRDGTLI 523
Score = 59.3 bits (142), Expect = 3e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Frame = +2
Query: 67 AVTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGS 126
AV + + +L+A+ D ++ I S + L GH ++ L ++ + S S
Sbjct: 104 AVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLAWSSDSHYICSAS 283
Query: 127 KDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQI 186
D + +WD G + LRGH V V F +VS S D+ +RVW++ T C+
Sbjct: 284 DDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVWEVKTGRCIHT 463
Query: 187 VSGHHSEIWSV 197
+ H + SV
Sbjct: 464 IIAHTMPVTSV 496
Score = 57.0 bits (136), Expect = 1e-08
Identities = 39/139 (28%), Positives = 64/139 (45%), Gaps = 1/139 (0%)
Frame = +2
Query: 24 ITYDSSGKHLLSPALEK-IAVWHVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAA 82
+ + + G L S +L+K + +W + TL+ G S ++ +A + S I +
Sbjct: 116 VKFSNDGTLLASASLDKTLIIWS------SATLSLLHRLTGHSEGISDLAWSSDSHYICS 277
Query: 83 GYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGL 142
D ++RI D+ G C TL GH AV + +N + + SGS D V +W+V +
Sbjct: 278 ASDDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVWEVKTGRCI 457
Query: 143 FRLRGHRDQVTDVVFLSSG 161
+ H VT V F G
Sbjct: 458 HTIIAHTMPVTSVHFNRDG 514
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/105 (26%), Positives = 53/105 (49%), Gaps = 3/105 (2%)
Frame = +2
Query: 395 SETNKTLAIDLQGHRSDVRSVTLSSDNSFLLSTSHN-AVKIWNPTTGSCLRTI--DSGYG 451
S +L L GH + + SSD+ ++ S S + ++IW+ T G C++T+ +
Sbjct: 182 SSATLSLLHRLTGHSEGISDLAWSSDSHYICSASDDRTLRIWDATGGDCVKTLRGHTHAV 361
Query: 452 LCSLVLPTNKYGLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSI 496
C P + Y + G+ D T+ + ++ +G C+ I AH + S+
Sbjct: 362 FCVNFNPQSNYIVSGSFDETVRVWEVKTGRCIHTIIAHTMPVTSV 496
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +2
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTS-HNAVKIWNPTTGSCL-RTIDSGYGLCSLVLPTNKY 462
L H + V V S+D + L S S + IW+ T S L R G+ L ++ +
Sbjct: 86 LTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLAWSSDSH 265
Query: 463 GLVGTKDG-TIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWE 518
+ D T+ I D G C++ + H ++ + P N V+GS D V+ WE
Sbjct: 266 YICSASDDRTLRIWDATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVWE 436
Score = 47.4 bits (111), Expect = 1e-05
Identities = 28/79 (35%), Positives = 39/79 (48%)
Frame = +2
Query: 621 KSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNR 680
K+L AHD +V VKF + S D+ + W + L L GH I LA S+
Sbjct: 80 KTLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLAWSSD 259
Query: 681 GDFIVTGSHDRSIRRWDRT 699
+I + S DR++R WD T
Sbjct: 260 SHYICSASDDRTLRIWDAT 316
>TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snRNP-specific
40 kDa protein (hPrp8-binding) {Homo sapiens;} , partial
(43%)
Length = 719
Score = 77.8 bits (190), Expect = 7e-15
Identities = 42/121 (34%), Positives = 74/121 (60%), Gaps = 2/121 (1%)
Frame = +1
Query: 103 LNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGLFR-LRGHRDQVTDVVFLSSG 161
L GH+ + +++N AG+V+ASGS D ++ LW+V GE F L+GH++ V D+ + + G
Sbjct: 292 LTGHQSVIYTMKFNPAGTVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLHWTTDG 471
Query: 162 KKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWS-VDVDPGERYLVTGSADKELRFYGI 220
++VS+S DK +RVWD++T ++ + H S + S G +V+GS D + + +
Sbjct: 472 TQIVSASPDKTVRVWDVETGKQVKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDM 651
Query: 221 K 221
+
Sbjct: 652 R 654
Score = 49.7 bits (117), Expect = 2e-06
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +1
Query: 581 LYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHK--SLFAHDDSVMAVKFVPK 638
L GH+ + M + G +I +GS D+ + +W + G+C L H ++V+ + +
Sbjct: 292 LTGHQSVIYTMKFNPAGTVIASGSHDREIFLWNV-HGECKNFMVLKGHKNAVLDLHWTTD 468
Query: 639 THYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRG-DFIVTGSHDRSIRRWD 697
+ S D+ V WD + +++ + H + + S RG +V+GS D + + WD
Sbjct: 469 GTQIVSASPDKTVRVWDVETGKQVKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWD 648
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 576 KFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAH 626
K F+ L GHK VL + ++DG IV+ S DK +++W ++ G K + H
Sbjct: 406 KNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRVWDVETGKQVKKMVEH 558
Score = 32.7 bits (73), Expect = 0.27
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 139 ETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQ-HCMQIVSGHHSEIWSV 197
E+ + L GH+ + + F +G + S S D+ + +W++ + ++ GH + + +
Sbjct: 274 ESPIMLLTGHQSVIYTMKFNPAGTVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDL 453
Query: 198 DVDPGERYLVTGSADKELRFYGIK 221
+V+ S DK +R + ++
Sbjct: 454 HWTTDGTQIVSASPDKTVRVWDVE 525
Score = 32.0 bits (71), Expect = 0.47
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 662 LLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
++ L GH + I+ + + G I +GSHDR I W+
Sbjct: 283 IMLLTGHQSVIYTMKFNPAGTVIASGSHDREIFLWN 390
Score = 28.9 bits (63), Expect = 4.0
Identities = 11/59 (18%), Positives = 31/59 (51%)
Frame = +1
Query: 184 MQIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYGIKHDSVDGASVNGGDDSSVSSKW 242
+ +++GH S I+++ +P + +GS D+E+ + + + + + G ++ + W
Sbjct: 283 IMLLTGHQSVIYTMKFNPAGTVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLHW 459
>TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subunit-like
protein, partial (20%)
Length = 979
Score = 76.6 bits (187), Expect = 2e-14
Identities = 69/271 (25%), Positives = 120/271 (43%), Gaps = 8/271 (2%)
Frame = +1
Query: 25 TYDSSGKHLLSPALEKIAVW-HVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAAG 83
T +S H SP L+ IAV H + K LT S V ++ P I A
Sbjct: 151 TLIASLHHSRSPFLDPIAVD*HHQHQQSKKMLTK---FETKSNRVKGLSFHPKRPWILAS 321
Query: 84 YGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGLF 143
G I++ D GT + H G V + ++ + + SG D + +W+ LF
Sbjct: 322 LHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFHHSQPLFVSGGDDYKIKVWNYKLHRCLF 501
Query: 144 RLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGE 203
L GH D + V F +VS+S D+ +R+W+ ++ C+ +++GH+ + P E
Sbjct: 502 TLLGHLDYIRTVQFHHESPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPRE 681
Query: 204 RYLVTGSADKELRFYGIKHDSVDGASVNGGDDSSVSSKWDVLRLFGEIQR------QSKD 257
+V+ S D+ +R + I S+ + + DD S+ + LFG + + D
Sbjct: 682 DLVVSASLDQTVRVWDI--GSLKRKNASPADDILRLSQMNT-DLFGGVDAVVKYVLEGHD 852
Query: 258 R-VATVQFNKSGNLLACQVAGKTVEIYRVLD 287
R V F+ + L+ + V+++R+ D
Sbjct: 853 RGVNWASFHPALPLIVSAADDRQVKLWRMND 945
Score = 60.5 bits (145), Expect = 1e-09
Identities = 51/239 (21%), Positives = 94/239 (38%)
Frame = +1
Query: 458 PTNKYGLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFW 517
P + L G I++ D GT ++ + H G +R + + FV+G D+ +K W
Sbjct: 295 PKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFHHSQPLFVSGGDDYKIKVW 474
Query: 518 EYQIKQKPGQATKQLAVSNVRTMKMNDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFKF 577
Y++ + L D + V ++ +I A D T+++ +
Sbjct: 475 NYKLHRCLFTLLGHL-----------DYIRTVQFHHESPWIVSASDDQTIRIWNWQSRTC 621
Query: 578 FLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVP 637
L GH V+C DL+V+ S D+ +++W D G + + D ++ +
Sbjct: 622 ISVLTGHNHYVMCALFHPREDLVVSASLDQTVRVW--DIGSLKRKNASPADDILRLS--- 786
Query: 638 KTHYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRW 696
+ + G D V Y LEGH + + IV+ + DR ++ W
Sbjct: 787 QMNTDLFGGVDAVVKY----------VLEGHDRGVNWASFHPALPLIVSAADDRQVKLW 933
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/114 (26%), Positives = 52/114 (45%)
Frame = +1
Query: 584 HKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVF 643
H PV + L V+G D +K+W C +L H D + V+F ++ ++
Sbjct: 388 HDGPVRGVHFHHSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIV 567
Query: 644 SVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
S D+ + W+ + L GH+ + C R D +V+ S D+++R WD
Sbjct: 568 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPREDLVVSASLDQTVRVWD 729
Score = 40.0 bits (92), Expect = 0.002
Identities = 24/89 (26%), Positives = 37/89 (40%)
Frame = +1
Query: 609 LKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGH 668
+++W G HD V V F S G D ++ W+ L TL GH
Sbjct: 337 IQLWDYRMGTLIDKFDEHDGPVRGVHFHHSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGH 516
Query: 669 HADIWCLAISNRGDFIVTGSHDRSIRRWD 697
I + + +IV+ S D++IR W+
Sbjct: 517 LDYIRTVQFHHESPWIVSASDDQTIRIWN 603
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +1
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTSHN-AVKIWNPTTGSCLRTID--SGYGLCSLVLPTNK 461
L GH +R+V ++ +++S S + ++IWN + +C+ + + Y +C+L P
Sbjct: 505 LLGHLDYIRTVQFHHESPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPRED 684
Query: 462 YGLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKF 516
+ + D T+ + DIGS A A I L N+ + G D VK+
Sbjct: 685 LVVSASLDQTVRVWDIGSLKRKNASPAD-----DILRLSQMNTDLFGGVDAVVKY 834
>AV780136
Length = 558
Score = 67.4 bits (163), Expect = 1e-11
Identities = 30/104 (28%), Positives = 54/104 (51%)
Frame = -1
Query: 112 ALRYNQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDK 171
AL N+ G+VL SG + + +WD + +LRGH D + ++ S+G+ +S S D
Sbjct: 558 ALAMNEGGTVLVSGGTEKVIRVWDPRSGSKTLKLRGHADNIRALLLDSTGRYCLSGSSDS 379
Query: 172 FLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKEL 215
+R+WD+ C+ + H +W++ P ++ +G D L
Sbjct: 378 MIRLWDIGQPRCLHTYAVHTDSVWALASTPTFSHVYSGGRDFSL 247
Score = 51.6 bits (122), Expect = 6e-07
Identities = 35/118 (29%), Positives = 55/118 (45%)
Frame = -1
Query: 579 LSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPK 638
L L GH + + + S G ++GS+D +++W + C + H DSV A+ P
Sbjct: 465 LKLRGHADNIRALLLDSTGRYCLSGSSDSMIRLWDIGQPRCLHTYAVHTDSVWALASTPT 286
Query: 639 THYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRW 696
+V+S G+D + D E L G H I LA+ + D I S D S+ +W
Sbjct: 285 FSHVYSGGRDFSLYLTDLQTRESSLLCTGEH-PIRQLALHD--DSIWVASTDSSVHKW 121
Score = 50.4 bits (119), Expect = 1e-06
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = -1
Query: 70 SIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDN 129
++A +++ +G + IR+ D G+ L GH + AL + G SGS D+
Sbjct: 558 ALAMNEGGTVLVSGGTEKVIRVWDPRSGSKTLKLRGHADNIRALLLDSTGRYCLSGSSDS 379
Query: 130 DVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSG 189
+ LWD+ L H D V + + + S +D L + DL T+ + +G
Sbjct: 378 MIRLWDIGQPRCLHTYAVHTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTG 199
Query: 190 HH 191
H
Sbjct: 198 EH 193
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/125 (24%), Positives = 60/125 (47%), Gaps = 2/125 (1%)
Frame = -1
Query: 428 SHNAVKIWNPTTGS-CLRTIDSGYGLCSLVLP-TNKYGLVGTKDGTIEIIDIGSGTCLEA 485
+ +++W+P +GS L+ + +L+L T +Y L G+ D I + DIG CL
Sbjct: 513 TEKVIRVWDPRSGSKTLKLRGHADNIRALLLDSTGRYCLSGSSDSMIRLWDIGQPRCLHT 334
Query: 486 IEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIKQKPGQATKQLAVSNVRTMKMNDD 545
H S+ ++A+ P + +G D + + Q ++ T + +R + ++DD
Sbjct: 333 YAVHTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGE---HPIRQLALHDD 163
Query: 546 VLVVA 550
+ VA
Sbjct: 162 SIWVA 148
Score = 45.1 bits (105), Expect = 5e-05
Identities = 28/114 (24%), Positives = 48/114 (41%), Gaps = 1/114 (0%)
Frame = -1
Query: 593 ISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVN 652
++ G ++V+G +K +++W G L H D++ A+ Y S D +
Sbjct: 549 MNEGGTVLVSGGTEKVIRVWDPRSGSKTLKLRGHADNIRALLLDSTGRYCLSGSSDSMIR 370
Query: 653 YWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD-RTEEQFFL 705
WD + L T H +W LA + + +G D S+ D +T E L
Sbjct: 369 LWDIGQPRCLHTYAVHTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLL 208
>TC12572 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (51%)
Length = 770
Score = 67.0 bits (162), Expect = 1e-11
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Frame = +3
Query: 479 SGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIKQKPGQATKQLAVSNVR 538
SG CL+ + AH + ++ D + V+ S D + W+ G K L
Sbjct: 6 SGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD----ASTGHCMKTLIDDE-- 167
Query: 539 TMKMNDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMD---ISS 595
N V V SP+AK+I V LD+ +++ T +F + GH C+ ++
Sbjct: 168 ----NPPVSFVKFSPNAKFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTT 335
Query: 596 DGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFS--VGKDRRVNY 653
+G +V GS D + +W L + L H D+V++V P + + S +G D+ V
Sbjct: 336 NGKYVVGGSEDHGIYLWELQTRKIVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKI 515
Query: 654 WDADK 658
W K
Sbjct: 516 WTQQK 530
Score = 64.7 bits (156), Expect = 7e-11
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Frame = +3
Query: 47 RQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAAGYGDGSIRILDSDKGTC-ETTLNG 105
+ G C K L S VT++ SLI + DG RI D+ G C +T ++
Sbjct: 3 KSGKCLKVLP------AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDD 164
Query: 106 HKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQ---VTDVVFLSSGK 162
V+ ++++ + G+ DN++ LW+ L GH + ++ ++GK
Sbjct: 165 ENPPVSFVKFSPNAKFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGK 344
Query: 163 KLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSA--DKELRFYGI 220
+V S+D + +W+L T+ +Q + GH + SV P E + +G+ DK ++ +
Sbjct: 345 YVVGGSEDHGIYLWELQTRKIVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKIWTQ 524
Query: 221 KHD 223
+ D
Sbjct: 525 QKD 533
Score = 64.3 bits (155), Expect = 9e-11
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Frame = +3
Query: 581 LYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDD-SVMAVKFVPKT 639
L H PV +D + DG LIV+ S D +IW G C K+L ++ V VKF P
Sbjct: 27 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNA 206
Query: 640 HYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLA---ISNRGDFIVTGSHDRSIRRW 696
++ D + W+ L T GH +C++ + G ++V GS D I W
Sbjct: 207 KFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGKYVVGGSEDHGIYLW 386
Query: 697 DRTEEQFFLEEEKEKRLEEKFEADLDYTSENKYAPKEEIPEEGAV 741
E + +++ +K E D P E + GA+
Sbjct: 387 ----------ELQTRKIVQKLEGHSDTVVSVSCHPTENMIASGAL 491
Score = 58.5 bits (140), Expect = 5e-09
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Frame = +3
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTSHNAV-KIWNPTTGSCLRT-IDSGYGLCSLV--LPTN 460
L H V +V + D S ++S+S++ + +IW+ +TG C++T ID S V P
Sbjct: 27 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNA 206
Query: 461 KYGLVGTKDGTIEIIDIGSGTCLEAIEAHGGS---LRSIAALPDKNSFVTGSADHDVKFW 517
K+ LVGT D + + + +G L+ H S + S + + V GS DH + W
Sbjct: 207 KFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGKYVVGGSEDHGIYLW 386
Query: 518 EYQIKQKPGQATKQLAVSNVRTMKMNDDVLV-VAISPDAKYIAVALL--DSTVKV 569
E Q ++ V+ ++ + D +V V+ P IA L D TVK+
Sbjct: 387 ELQTRK------------IVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKI 515
Score = 55.1 bits (131), Expect = 5e-08
Identities = 42/164 (25%), Positives = 68/164 (40%), Gaps = 25/164 (15%)
Frame = +3
Query: 145 LRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQ-IVSGHHSEIWSVDVDPGE 203
L H D VT V F G +VSSS D R+WD T HCM+ ++ + + V P
Sbjct: 27 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNA 206
Query: 204 RYLVTGSADKELRFYGIK---------------------HDSVDGASVNGGDDSSVSSKW 242
++++ G+ D LR + + +G V GG + W
Sbjct: 207 KFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGKYVVGGSEDHGIYLW 386
Query: 243 DV-LRLFGEIQRQSKDRVATVQFNKSGNLLACQVAG--KTVEIY 283
++ R + D V +V + + N++A G KTV+I+
Sbjct: 387 ELQTRKIVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKIW 518
Score = 54.7 bits (130), Expect = 7e-08
Identities = 36/159 (22%), Positives = 72/159 (44%), Gaps = 6/159 (3%)
Frame = +3
Query: 24 ITYDSSGKHLLSPALEKIA-VWHVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAA 82
+ ++ G ++S + + + +W G C KTL +P V+ + +P++ I
Sbjct: 57 VDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDE-----NPPVSFVKFSPNAKFILV 221
Query: 83 GYGDGSIRILDSDKGTCETTLNGH---KGAVTALRYNQAGSVLASGSKDNDVILWDVVGE 139
G D ++R+ + G T GH K +++ G + GS+D+ + LW++
Sbjct: 222 GTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGKYVVGGSEDHGIYLWELQTR 401
Query: 140 TGLFRLRGHRDQVTDVVFLSSGKKLVSSS--KDKFLRVW 176
+ +L GH D V V + + S + DK +++W
Sbjct: 402 KIVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKIW 518
Score = 48.5 bits (114), Expect = 5e-06
Identities = 38/147 (25%), Positives = 65/147 (43%), Gaps = 4/147 (2%)
Frame = +3
Query: 97 GTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDV-VGETGLFRLRGHRDQVTDV 155
G C L H VTA+ +N+ GS++ S S D +WD G + V+ V
Sbjct: 9 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 188
Query: 156 VFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSE---IWSVDVDPGERYLVTGSAD 212
F + K ++ + D LR+W+ T ++ +GH + I S +Y+V GS D
Sbjct: 189 KFSPNAKFILVGTLDNNLRLWNYSTGRFLKTYTGHVNSKYCISSTFSTTNGKYVVGGSED 368
Query: 213 KELRFYGIKHDSVDGASVNGGDDSSVS 239
+ + ++ + + G D+ VS
Sbjct: 369 HGIYLWELQTRKI-VQKLEGHSDTVVS 446
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/88 (29%), Positives = 39/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 617 GDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTL-EGHHADIWCL 675
G C K L AH D V AV F + S D WDA + TL + + + +
Sbjct: 9 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 188
Query: 676 AISNRGDFIVTGSHDRSIRRWDRTEEQF 703
S FI+ G+ D ++R W+ + +F
Sbjct: 189 KFSPNAKFILVGTLDNNLRLWNYSTGRF 272
>TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG
{Arabidopsis thaliana;} , partial (24%)
Length = 1048
Score = 62.0 bits (149), Expect = 4e-10
Identities = 66/288 (22%), Positives = 114/288 (38%), Gaps = 9/288 (3%)
Frame = +3
Query: 418 SSDNSFLLSTSHNA-VKIWNPTTGSCLRTIDSGYGLCSLVL--PTNKYGLVGTKDGTIEI 474
SSD L S + V +WN T T + + S V P + + D ++ +
Sbjct: 21 SSDGKMLASAGDDKKVVLWNMDTLQTESTPEQHKSVISDVRFRPNSSQLATASIDKSVRL 200
Query: 475 IDIGSGT-CLEAIEAHGGSLRSIAALPDKNS-FVTGSADHDVKFWEYQIKQKPGQATKQL 532
D + T C++ H ++ S+ P K F + +++++W
Sbjct: 201 WDAANPTYCVQEYNGHSSAIMSLDFHPKKTDIFCFCDSANEIRYWNI------------- 341
Query: 533 AVSNVRTMKMNDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPV--LC 590
S+ T V P + A D V + V++ + +L GH PV +C
Sbjct: 342 -TSSSCTRVSKGGSSQVRFQPRIGQVLSAASD*VVSIFDVESDRQIYTLQGHPEPVNSIC 518
Query: 591 MDISSDGDLIVTGSADKNL-KIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDR 649
D++ D S NL KIW L G+C + L + + + F P + +G
Sbjct: 519 WDVNGD----FLASVSPNLVKIWSLTSGECIQELSSSGNQFYSCVFHPSYSTLLVIGGFS 686
Query: 650 RVNYWD-ADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRW 696
+ W+ AD + +T+ H + I LA S + + SHD S++ W
Sbjct: 687 SLELWNMAD--NKSMTISAHESVISALAQSPVTGMVASASHDNSVKLW 824
Score = 52.4 bits (124), Expect = 3e-07
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +3
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTSHNAVKIWNPTTGSCLRTI-DSGYGLCSLVL-PTNKY 462
LQGH V S+ + FL S S N VKIW+ T+G C++ + SG S V P+
Sbjct: 483 LQGHPEPVNSICWDVNGDFLASVSPNLVKIWSLTSGECIQELSSSGNQFYSCVFHPSYST 662
Query: 463 GLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWE 518
LV ++E+ ++ + I AH + ++A P + S D+ VK W+
Sbjct: 663 LLVIGGFSSLELWNMADNKSM-TISAHESVISALAQSPVTGMVASASHDNSVKLWK 827
Score = 47.0 bits (110), Expect = 1e-05
Identities = 47/219 (21%), Positives = 88/219 (39%), Gaps = 43/219 (19%)
Frame = +3
Query: 26 YDSSGKHLLSPALEK-IAVWHVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAAGY 84
+ S GK L S +K + +W++ TL ++ + P+SS +A
Sbjct: 18 FSSDGKMLASAGDDKKVVLWNM------DTLQTESTPEQHKSVISDVRFRPNSSQLATAS 179
Query: 85 GDGSIRILDSDKGT-CETTLNGHKGAVTALRYN--------------------------- 116
D S+R+ D+ T C NGH A+ +L ++
Sbjct: 180 IDKSVRLWDAANPTYCVQEYNGHSSAIMSLDFHPKKTDIFCFCDSANEIRYWNITSSSCT 359
Query: 117 --------------QAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGK 162
+ G VL++ S D V ++DV + ++ L+GH + V + + +G
Sbjct: 360 RVSKGGSSQVRFQPRIGQVLSAAS-D*VVSIFDVESDRQIYTLQGHPEPVNSICWDVNGD 536
Query: 163 KLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDP 201
L S S + +++W L + C+Q +S ++ +S P
Sbjct: 537 FLASVSPN-LVKIWSLTSGECIQELSSSGNQFYSCVFHP 650
Score = 42.7 bits (99), Expect = 3e-04
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Frame = +3
Query: 68 VTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSK 127
VT + ++A+ D + + + D E+T HK ++ +R+ S LA+ S
Sbjct: 3 VTCCHFSSDGKMLASAGDDKKVVLWNMDTLQTESTPEQHKSVISDVRFRPNSSQLATASI 182
Query: 128 DNDVILWDVVGETGLFR-LRGHRDQVTDVVFLSSGKKLVS-SSKDKFLRVWDLDTQHCMQ 185
D V LWD T + GH + + F + +R W++ + C +
Sbjct: 183 DKSVRLWDAANPTYCVQEYNGHSSAIMSLDFHPKKTDIFCFCDSANEIRYWNITSSSCTR 362
Query: 186 IVSGHHSEIWSVDVDPGERYLVTGSADKELRFYGIKHDSVDGASVNGGDDSSVSSKWDV 244
+ G S+ V P +++ ++D + + ++ D ++ G + S WDV
Sbjct: 363 VSKGGSSQ---VRFQPRIGQVLSAASD*VVSIFDVESDR-QIYTLQGHPEPVNSICWDV 527
Score = 42.4 bits (98), Expect = 3e-04
Identities = 32/160 (20%), Positives = 65/160 (40%), Gaps = 2/160 (1%)
Frame = +3
Query: 549 VAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLY-GHKLPVLCMDIS-SDGDLIVTGSAD 606
V P++ +A A +D +V++ + + Y GH ++ +D D+ +
Sbjct: 138 VRFRPNSSQLATASIDKSVRLWDAANPTYCVQEYNGHSSAIMSLDFHPKKTDIFCFCDSA 317
Query: 607 KNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLE 666
++ W + C + V+F P+ V S D V+ +D + ++ TL+
Sbjct: 318 NEIRYWNITSSSCTR---VSKGGSSQVRFQPRIGQVLSAASD*VVSIFDVESDRQIYTLQ 488
Query: 667 GHHADIWCLAISNRGDFIVTGSHDRSIRRWDRTEEQFFLE 706
GH + + GDF+ + S ++ W T + E
Sbjct: 489 GHPEPVNSICWDVNGDFLASVS-PNLVKIWSLTSGECIQE 605
Score = 42.4 bits (98), Expect = 3e-04
Identities = 19/69 (27%), Positives = 32/69 (45%)
Frame = +3
Query: 588 VLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGK 647
V C SSDG ++ + DK + +W +D + H + V+F P + + +
Sbjct: 3 VTCCHFSSDGKMLASAGDDKKVVLWNMDTLQTESTPEQHKSVISDVRFRPNSSQLATASI 182
Query: 648 DRRVNYWDA 656
D+ V WDA
Sbjct: 183 DKSVRLWDA 209
Score = 35.8 bits (81), Expect = 0.032
Identities = 36/158 (22%), Positives = 59/158 (36%), Gaps = 8/158 (5%)
Frame = +3
Query: 368 PSTPKNSLAGLALSLNNNLLEFYSIQSS-----ETNKTLAI-DLQGHRSDVRSVTLSSDN 421
P K+ ++ + N++ L SI S N T + + GH S + S+
Sbjct: 108 PEQHKSVISDVRFRPNSSQLATASIDKSVRLWDAANPTYCVQEYNGHSSAIMSLDFHPKK 287
Query: 422 S--FLLSTSHNAVKIWNPTTGSCLRTIDSGYGLCSLVLPTNKYGLVGTKDGTIEIIDIGS 479
+ F S N ++ WN T+ SC R G P L D + I D+ S
Sbjct: 288 TDIFCFCDSANEIRYWNITSSSCTRVSKGGSSQVRF-QPRIGQVLSAASD*VVSIFDVES 464
Query: 480 GTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFW 517
+ ++ H + SI F+ + + VK W
Sbjct: 465 DRQIYTLQGHPEPVNSI-CWDVNGDFLASVSPNLVKIW 575
>TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial (60%)
Length = 453
Score = 60.8 bits (146), Expect = 9e-10
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +2
Query: 121 VLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDT 180
+LASG D +LW L H +TDV F S +L +SS DK ++VWD+D
Sbjct: 2 LLASGGHDKKAVLWYTDSLKQKATLEEHSALITDVRFSPSMPRLATSSFDKTVKVWDVDN 181
Query: 181 Q-HCMQIVSGHHSEIWSVDVDPGERYLVTG-SADKELRFYGIKHDSVDGASVNG 232
+ ++ +GH + + S+D P + L+ +D E+R++ I + S S G
Sbjct: 182 PGYSLRTFTGHSASVMSLDFHPNKEDLICSCDSDGEIRYWSINNGSCARVSKGG 343
Score = 38.1 bits (87), Expect = 0.007
Identities = 23/73 (31%), Positives = 36/73 (48%), Gaps = 2/73 (2%)
Frame = +2
Query: 549 VAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLY-GHKLPVLCMDISSDG-DLIVTGSAD 606
V SP +A + D TVKV VD + L + GH V+ +D + DLI + +D
Sbjct: 104 VRFSPSMPRLATSSFDKTVKVWDVDNPGYSLRTFTGHSASVMSLDFHPNKEDLICSCDSD 283
Query: 607 KNLKIWGLDFGDC 619
++ W ++ G C
Sbjct: 284 GEIRYWSINNGSC 322
Score = 33.5 bits (75), Expect = 0.16
Identities = 17/54 (31%), Positives = 27/54 (49%)
Frame = +2
Query: 644 SVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
S G D++ W D ++ TLE H A I + S + T S D++++ WD
Sbjct: 11 SGGHDKKAVLWYTDSLKQKATLEEHSALITDVRFSPSMPRLATSSFDKTVKVWD 172
>AV407645
Length = 413
Score = 58.2 bits (139), Expect = 6e-09
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 106 HKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGL---FRLRGHRDQVTDVVFLSSGK 162
H V ++++ G LAS S D I+W+V G GL RL GH+ + + + + +
Sbjct: 5 HDDEVWLVQFSHNGKYLASASNDRTAIIWEV-GINGLSLKHRLSGHQKAFSSISWSPNDQ 181
Query: 163 KLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYGIKH 222
+L++ ++ +R WD+ T C+QI + + S P +Y+++G +DK + + +
Sbjct: 182 ELLTCGVEEAIRRWDVSTGKCLQIYEKAGAGLISCTWFPSGKYILSGLSDKSICMWELDG 361
Query: 223 DSVD 226
V+
Sbjct: 362 KEVE 373
Score = 37.0 bits (84), Expect = 0.015
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +2
Query: 543 NDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLS--LYGHKLPVLCMDISSDGDLI 600
+D+V +V S + KY+A A D T + V L L GH+ + S + +
Sbjct: 8 DDEVWLVQFSHNGKYLASASNDRTAIIWEVGINGLSLKHRLSGHQKAFSSISWSPNDQEL 187
Query: 601 VTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDAD 657
+T ++ ++ W + G C + +++ + P Y+ S D+ + W+ D
Sbjct: 188 LTCGVEEAIRRWDVSTGKCLQIYEKAGAGLISCTWFPSGKYILSGLSDKSICMWELD 358
Score = 36.2 bits (82), Expect = 0.025
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 625 AHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDA--DKFERLLTLEGHHADIWCLAISNRGD 682
AHDD V V+F Y+ S DR W+ + L GH ++ S
Sbjct: 2 AHDDEVWLVQFSHNGKYLASASNDRTAIIWEVGINGLSLKHRLSGHQKAFSSISWSPNDQ 181
Query: 683 FIVTGSHDRSIRRWD 697
++T + +IRRWD
Sbjct: 182 ELLTCGVEEAIRRWD 226
Score = 33.9 bits (76), Expect = 0.12
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +2
Query: 408 HRSDVRSVTLSSDNSFLLSTSHNAVKI-WNP-TTGSCLRTIDSGYGLCSLVL---PTNKY 462
H +V V S + +L S S++ I W G L+ SG+ + P ++
Sbjct: 5 HDDEVWLVQFSHNGKYLASASNDRTAIIWEVGINGLSLKHRLSGHQKAFSSISWSPNDQE 184
Query: 463 GLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIK 522
L + I D+ +G CL+ E G L S P ++G +D + WE K
Sbjct: 185 LLTCGVEEAIRRWDVSTGKCLQIYEKAGAGLISCTWFPSGKYILSGLSDKSICMWELDGK 364
Query: 523 Q-KPGQATKQLAVSNV 537
+ + + K L +S++
Sbjct: 365 EVESWKGPKTLKISDL 412
Score = 32.3 bits (72), Expect = 0.36
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 24 ITYDSSGKHLLSPALEKIAV-WHVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIAA 82
+ + +GK+L S + ++ A+ W V GI L+ G A +SI+ +P+ +
Sbjct: 26 VQFSHNGKYLASASNDRTAIIWEV--GI--NGLSLKHRLSGHQKAFSSISWSPNDQELLT 193
Query: 83 GYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGE 139
+ +IR D G C + + + +G + SG D + +W++ G+
Sbjct: 194 CGVEEAIRRWDVSTGKCLQIYEKAGAGLISCTWFPSGKYILSGLSDKSICMWELDGK 364
>TC13023 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Fragment),
partial (18%)
Length = 591
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/96 (31%), Positives = 51/96 (52%)
Frame = +1
Query: 62 RGPSPAVTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSV 121
+G S +VT++A +P +L+ + IR+ D C + GH+G V + + +G +
Sbjct: 274 QGDSESVTALALSPDDNLLFSSGHSRQIRVWDLSTLKCVRSWKGHEGPVMCMSCHPSGGL 453
Query: 122 LASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVF 157
LA+G D V++WDV G +GH V+ V+F
Sbjct: 454 LATGGADRKVLVWDVDGGYCTHFFKGHGGVVSCVMF 561
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/95 (31%), Positives = 46/95 (47%)
Frame = +1
Query: 543 NDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVT 602
++ V +A+SPD + + ++V + T K S GH+ PV+CM G L+ T
Sbjct: 283 SESVTALALSPDDNLLFSSGHSRQIRVWDLSTLKCVRSWKGHEGPVMCMSCHPSGGLLAT 462
Query: 603 GSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVP 637
G AD+ + +W +D G C H V V F P
Sbjct: 463 GGADRKVLVWDVDGGYCTHFFKGHGGVVSCVMFHP 567
Score = 56.2 bits (134), Expect = 2e-08
Identities = 36/124 (29%), Positives = 57/124 (45%)
Frame = +1
Query: 78 SLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVV 137
S IA G+ SI+I+DS + +TL G +VTAL + ++L S + +WD+
Sbjct: 199 SFIACACGE-SIKIVDSANASIRSTLQGDSESVTALALSPDDNLLFSSGHSRQIRVWDLS 375
Query: 138 GETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSV 197
+ +GH V + SG L + D+ + VWD+D +C GH + V
Sbjct: 376 TLKCVRSWKGHEGPVMCMSCHPSGGLLATGGADRKVLVWDVDGGYCTHFFKGHGGVVSCV 555
Query: 198 DVDP 201
P
Sbjct: 556 MFHP 567
Score = 54.7 bits (130), Expect = 7e-08
Identities = 28/105 (26%), Positives = 48/105 (45%)
Frame = +1
Query: 593 ISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVN 652
+SSDG I + ++KI +L +SV A+ P + +FS G R++
Sbjct: 184 VSSDGSFIACACGE-SIKIVDSANASIRSTLQGDSESVTALALSPDDNLLFSSGHSRQIR 360
Query: 653 YWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
WD + + + +GH + C++ G + TG DR + WD
Sbjct: 361 VWDLSTLKCVRSWKGHEGPVMCMSCHPSGGLLATGGADRKVLVWD 495
Score = 50.1 bits (118), Expect = 2e-06
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +1
Query: 398 NKTLAIDLQGHRSDVRSVTLSSDNSFLLSTSHNA-VKIWNPTTGSCLRTIDSGYG--LCS 454
N ++ LQG V ++ LS D++ L S+ H+ +++W+ +T C+R+ G +C
Sbjct: 250 NASIRSTLQGDSESVTALALSPDDNLLFSSGHSRQIRVWDLSTLKCVRSWKGHEGPVMCM 429
Query: 455 LVLPTNKYGLVGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPD 501
P+ G D + + D+ G C + HGG + + PD
Sbjct: 430 SCHPSGGLLATGGADRKVLVWDVDGGYCTHFFKGHGGVVSCVMFHPD 570
Score = 47.8 bits (112), Expect = 8e-06
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +1
Query: 551 ISPDAKYIAVALLDSTVKVHFVDTFKFFL--SLYGHKLPVLCMDISSDGDLIVTGSADKN 608
+S D +IA A +S + VD+ + +L G V + +S D +L+ + +
Sbjct: 184 VSSDGSFIACACGES---IKIVDSANASIRSTLQGDSESVTALALSPDDNLLFSSGHSRQ 354
Query: 609 LKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGH 668
+++W L C +S H+ VM + P + + G DR+V WD D +GH
Sbjct: 355 IRVWDLSTLKCVRSWKGHEGPVMCMSCHPSGGLLATGGADRKVLVWDVDGGYCTHFFKGH 534
Query: 669 HADIWCL 675
+ C+
Sbjct: 535 GGVVSCV 555
Score = 45.8 bits (107), Expect = 3e-05
Identities = 22/76 (28%), Positives = 36/76 (46%)
Frame = +1
Query: 145 LRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGER 204
L+G + VT + L SS + +RVWDL T C++ GH + + P
Sbjct: 271 LQGDSESVTALALSPDDNLLFSSGHSRQIRVWDLSTLKCVRSWKGHEGPVMCMSCHPSGG 450
Query: 205 YLVTGSADKELRFYGI 220
L TG AD+++ + +
Sbjct: 451 LLATGGADRKVLVWDV 498
Score = 37.7 bits (86), Expect = 0.009
Identities = 25/115 (21%), Positives = 48/115 (41%)
Frame = +1
Query: 2 VKAYLRYEPAAAFGVIASVDSNITYDSSGKHLLSPALEKIAVWHVRQGICTKTLTPPPPS 61
+++ L+ + + + S D N+ + S +I VW + C ++
Sbjct: 259 IRSTLQGDSESVTALALSPDDNLLFSSGHSR-------QIRVWDLSTLKCVRSW------ 399
Query: 62 RGPSPAVTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYN 116
+G V ++ PS L+A G D + + D D G C GH G V+ + ++
Sbjct: 400 KGHEGPVMCMSCHPSGGLLATGGADRKVLVWDVDGGYCTHFFKGHGGVVSCVMFH 564
>TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1379
Score = 56.6 bits (135), Expect = 2e-08
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Frame = +3
Query: 62 RGPSPAVTSIAST-PSSSLIAAGYGDGSIRIL-----DSDKGTCETTLNGHKGAVTALRY 115
R + VT+IA+ +S +I D SI + D G L GH V +
Sbjct: 105 RAHTDQVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVL 284
Query: 116 NQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRV 175
+ G SGS D ++ LWD+ T R GH V V F +++VS+S+D+ +++
Sbjct: 285 SSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKL 464
Query: 176 WDL--DTQHCMQIVSGHHSEIWSVDVDPG--ERYLVTGSADKELRFYGI 220
W+ + ++ +Q H + V P + +V+ S D+ ++ + +
Sbjct: 465 WNTLGECKYTIQDNDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNL 611
Score = 54.7 bits (130), Expect = 7e-08
Identities = 63/257 (24%), Positives = 92/257 (35%), Gaps = 4/257 (1%)
Frame = +3
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTSHNAVKIWNPTTGSCLRTIDSGYGLCSLVLPTNKYGL 464
L GH V+ V LSSD F LS
Sbjct: 246 LTGHSHFVQDVVLSSDGQFALS-------------------------------------- 311
Query: 465 VGTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIKQK 524
G+ DG + + D+ +GT H + S+A D V+ S D +K W
Sbjct: 312 -GSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLW-----NT 473
Query: 525 PGQATKQLAVSNVRTMKMNDDVLVVAISPDA--KYIAVALLDSTVKVHFVDTFKFFLSLY 582
G+ + ++ +D V V SP I A D TVKV + K +L
Sbjct: 474 LGECKYTIQDNDAH----SDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLA 641
Query: 583 GHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHD--DSVMAVKFVPKTH 640
GH V + +S DG L +G D + +W L G K L++ D + A+ F P
Sbjct: 642 GHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG---KRLYSLDAGSIIHALCFSP-NR 809
Query: 641 YVFSVGKDRRVNYWDAD 657
Y + + WD +
Sbjct: 810 YWLCAATETSIKIWDLE 860
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/226 (20%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Frame = +3
Query: 23 NITYDSSGKHLLSPALEK-IAVWHVRQGICTKTLTPPPPSRGPSPAVTSIASTPSSSLIA 81
++ + + ++S + ++ I +W+ G C T+ V ST ++++
Sbjct: 399 SVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQDNDAHSDWVSCVRFSPSTLQPTIVS 575
Query: 82 AGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETG 141
A + D ++++ + TL GH G V + + GS+ ASG KD ++LWD+
Sbjct: 576 ASW-DRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR 752
Query: 142 LFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDP 201
L+ L + + S + + ++ + +++WDL+++ + E VD+
Sbjct: 753 LYSL--DAGSIIHALCFSPNRYWLCAATETSIKIWDLESKSIV--------EDLKVDLKT 902
Query: 202 GERYLVTGSADKELRFYGIKHD-SVDGASVNGGDDSSVSSKWDVLR 246
G+ +K+ Y + S DG+++ G V W + R
Sbjct: 903 EADATTGGNTNKKKVIYCTSLNWSADGSTLFSGYTDGVIRVWAIGR 1040
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 581 LYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTH 640
L GH V + +SSDG ++GS D L++W L G + H V++V F
Sbjct: 246 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNR 425
Query: 641 YVFSVGKDRRVNYWDA-DKFERLLTLEGHHADIWCLAI----SNRGDFIVTGSHDRSIRR 695
+ S +DR + W+ + + + H+D W + S IV+ S DR+++
Sbjct: 426 QIVSASRDRTIKLWNTLGECKYTIQDNDAHSD-WVSCVRFSPSTLQPTIVSASWDRTVKV 602
Query: 696 WDRT 699
W+ T
Sbjct: 603 WNLT 614
Score = 50.1 bits (118), Expect = 2e-06
Identities = 61/240 (25%), Positives = 101/240 (41%), Gaps = 5/240 (2%)
Frame = +3
Query: 486 IEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIKQKPGQATKQLAVSNVRTMKMNDD 545
+ H ++ + D ++GS D +++ W+ S R + D
Sbjct: 246 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAA-----------GTSARRFVGHTKD 392
Query: 546 VLVVAISPDAKYIAVALLDSTVKV-HFVDTFKFFLSLY-GHKLPVLCMDISSDG--DLIV 601
VL VA S D + I A D T+K+ + + K+ + H V C+ S IV
Sbjct: 393 VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDNDAHSDWVSCVRFSPSTLQPTIV 572
Query: 602 TGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFER 661
+ S D+ +K+W L +L H V V P S GKD + WD + +R
Sbjct: 573 SASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR 752
Query: 662 LLTLE-GHHADIWCLAISNRGDFIVTGSHDRSIRRWDRTEEQFFLEEEKEKRLEEKFEAD 720
L +L+ G C + NR + + + + SI+ WD E + +E+ K ++ K EAD
Sbjct: 753 LYSLDAGSIIHALCFS-PNR--YWLCAATETSIKIWD-LESKSIVEDLK---VDLKTEAD 911
Score = 49.3 bits (116), Expect = 3e-06
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 25/233 (10%)
Frame = +3
Query: 407 GHRSDVRSVTLSSDNSFLLSTSHN-AVKIWNPTTGSCLRTID-----SGYGLCSLVLPTN 460
GH DV SV S DN ++S S + +K+WN T G C TI S + C P+
Sbjct: 378 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQDNDAHSDWVSCVRFSPST 554
Query: 461 KYGLV--GTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWE 518
+ + D T+++ ++ + + H G + ++A PD + +G D + W+
Sbjct: 555 LQPTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWD 734
Query: 519 YQIKQKPGQATKQLAVSNVRTMKMNDDVLVVAISPDAKYIAVALLDSTVKV------HFV 572
G+ L ++ + + SP+ +Y A ++++K+ V
Sbjct: 735 L----AEGKRLYSLDAGSI--------IHALCFSPN-RYWLCAATETSIKIWDLESKSIV 875
Query: 573 DTFKFFLSL---------YGHKLPVLCMDI--SSDGDLIVTGSADKNLKIWGL 614
+ K L K + C + S+DG + +G D +++W +
Sbjct: 876 EDLKVDLKTEADATTGGNTNKKKVIYCTSLNWSADGSTLFSGYTDGVIRVWAI 1034
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/111 (27%), Positives = 46/111 (40%), Gaps = 5/111 (4%)
Frame = +3
Query: 596 DGDLIVTGSADKNLKIWGL-----DFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRR 650
+ D+IVT S DK++ +W L +G + L H V V + S D
Sbjct: 150 NSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGE 329
Query: 651 VNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWDRTEE 701
+ WD GH D+ +A S IV+ S DR+I+ W+ E
Sbjct: 330 LRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE 482
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/128 (23%), Positives = 63/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 361 ICSISFCPSTPKNSLAGLALSLNNNLLEFYSIQSSETNKTLAIDLQGHRSDVRSVTLSSD 420
+ + F PST + ++ + + ++ +++ + + TLA GH V +V +S D
Sbjct: 525 VSCVRFSPSTLQPTIVSASW---DRTVKVWNLTNCKLRNTLA----GHSGYVNTVAVSPD 683
Query: 421 NSFLLSTSHNAV-KIWNPTTGSCLRTIDSGYGLCSLVLPTNKYGLVGTKDGTIEIIDIGS 479
S S + V +W+ G L ++D+G + +L N+Y L + +I+I D+ S
Sbjct: 684 GSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAATETSIKIWDLES 863
Query: 480 GTCLEAIE 487
+ +E ++
Sbjct: 864 KSIVEDLK 887
>TC19491 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;}, partial (39%)
Length = 527
Score = 54.3 bits (129), Expect = 9e-08
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 66 PAVTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASG 125
P + + S L+ DG++ + D++ T++GH V + + G +A+G
Sbjct: 22 PVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDGGAIATG 201
Query: 126 SKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLS------SGKKLVSSSKDKFLRVWDLD 179
S D V LWD+ + + H DQV V F G +L S S DK + ++D
Sbjct: 202 SSDRTVRLWDLAMRASVQTMSNHTDQVWGVAFRPPGGTDVRGGRLASVSDDKSISLYDYS 381
Query: 180 ---TQHCMQ 185
+HC Q
Sbjct: 382 *S*FRHCTQ 408
Score = 51.2 bits (121), Expect = 7e-07
Identities = 30/108 (27%), Positives = 53/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 554 DAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWG 613
D + + A D V ++ + ++ GH VLC+D+S DG I TGS+D+ +++W
Sbjct: 52 DPRLLFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDGGAIATGSSDRTVRLWD 231
Query: 614 LDFGDCHKSLFAHDDSVMAVKFVP------KTHYVFSVGKDRRVNYWD 655
L +++ H D V V F P + + SV D+ ++ +D
Sbjct: 232 LAMRASVQTMSNHTDQVWGVAFRPPGGTDVRGGRLASVSDDKSISLYD 375
Score = 50.1 bits (118), Expect = 2e-06
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Frame = +1
Query: 103 LNGHKGAVTALRYNQAGS-VLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSG 161
L GH V +L Y+ +L + S D +V ++D G+ + + GH V V G
Sbjct: 4 LEGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDG 183
Query: 162 KKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDP-------GERYLVTGSADKE 214
+ + S D+ +R+WDL + +Q +S H ++W V P G R L + S DK
Sbjct: 184 GAIATGSSDRTVRLWDLAMRASVQTMSNHTDQVWGVAFRPPGGTDVRGGR-LASVSDDKS 360
Query: 215 LRFY 218
+ Y
Sbjct: 361 ISLY 372
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 642 VFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
+F+ D V+ +DA+ + T+ GH + + C+ +S G I TGS DR++R WD
Sbjct: 64 LFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDGGAIATGSSDRTVRLWD 231
Score = 40.4 bits (93), Expect = 0.001
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Frame = +1
Query: 581 LYGHKLPVLCMDISS-DGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKT 639
L GH +PV + S D L+ T S D N+ ++ + ++ H V+ V P
Sbjct: 4 LEGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDG 183
Query: 640 HYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAI------SNRGDFIVTGSHDRSI 693
+ + DR V WD + T+ H +W +A RG + + S D+SI
Sbjct: 184 GAIATGSSDRTVRLWDLAMRASVQTMSNHTDQVWGVAFRPPGGTDVRGGRLASVSDDKSI 363
Query: 694 RRWD 697
+D
Sbjct: 364 SLYD 375
Score = 38.1 bits (87), Expect = 0.007
Identities = 22/77 (28%), Positives = 42/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 145 LRGHRDQVTDVVFLSSGKKLV-SSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGE 203
L GH V +V+ +L+ ++S D + ++D + + + +SGH S + VDV P
Sbjct: 4 LEGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDG 183
Query: 204 RYLVTGSADKELRFYGI 220
+ TGS+D+ +R + +
Sbjct: 184 GAIATGSSDRTVRLWDL 234
Score = 31.6 bits (70), Expect = 0.61
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +1
Query: 469 DGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIK 522
DG + + D + + H + + PD + TGS+D V+ W+ ++
Sbjct: 82 DGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDGGAIATGSSDRTVRLWDLAMR 243
>TC16695 homologue to UP|Q94KS2 (Q94KS2) TGF-beta receptor-interacting
protein 1, partial (46%)
Length = 531
Score = 53.9 bits (128), Expect = 1e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 626 HDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIV 685
H+ + +K+ +FS KD W AD ERL T GH+ +WC +S ++
Sbjct: 102 HERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSSRLI 281
Query: 686 TGSHDRSIRRWD-RTEEQFF 704
TGS D++ + W+ +T +Q F
Sbjct: 282 TGSADQTAKLWNVQTGQQLF 341
Score = 47.0 bits (110), Expect = 1e-05
Identities = 28/105 (26%), Positives = 51/105 (47%)
Frame = +3
Query: 103 LNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGK 162
+ GH+ +T L+YN+ G +L S +KD++ +W L RGH V
Sbjct: 93 MKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSS 272
Query: 163 KLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLV 207
+L++ S D+ ++W++ T + S SVD+ G++ +V
Sbjct: 273 RLITGSADQTAKLWNVQTGQQL-FTFNFDSPARSVDLSVGDKLVV 404
Score = 45.8 bits (107), Expect = 3e-05
Identities = 22/77 (28%), Positives = 37/77 (47%)
Frame = +3
Query: 145 LRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGER 204
++GH +T + + G L S +KD VW D + GH+ +W DV
Sbjct: 93 MKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSS 272
Query: 205 YLVTGSADKELRFYGIK 221
L+TGSAD+ + + ++
Sbjct: 273 RLITGSADQTAKLWNVQ 323
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/54 (35%), Positives = 27/54 (49%)
Frame = +3
Query: 564 DSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFG 617
D V F D + + GH V C D+S D ++TGSAD+ K+W + G
Sbjct: 168 DHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWNVQTG 329
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/125 (28%), Positives = 54/125 (42%), Gaps = 1/125 (0%)
Frame = +3
Query: 52 TKTLTPPPP-SRGPSPAVTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAV 110
T+T T P +G +T + L+ + D + + +D G T GH GAV
Sbjct: 63 TRTTTMRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAV 242
Query: 111 TALRYNQAGSVLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKD 170
++ S L +GS D LW+V +TG + D V LS G KLV + D
Sbjct: 243 WCCDVSRDSSRLITGSADQTAKLWNV--QTGQQLFTFNFDSPARSVDLSVGDKLVVITTD 416
Query: 171 KFLRV 175
F+ +
Sbjct: 417 PFMEL 431
Score = 29.6 bits (65), Expect = 2.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 479 SGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFWEYQIKQK 524
+G L H G++ D + +TGSAD K W Q Q+
Sbjct: 198 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWNVQTGQQ 335
>TC16458 similar to UP|O48679 (O48679) F3I6.5 protein, partial (20%)
Length = 539
Score = 53.1 bits (126), Expect = 2e-07
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Frame = +3
Query: 102 TLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGETG------LFRLRGHRDQVTDV 155
TL HK AV AL N+ GSVL SG+ D +++W+ G G + LRGH + +
Sbjct: 42 TLEKHKSAVNALALNEDGSVLYSGACDRSILVWERDGGDGGGEMVVVGALRGHTKAILCL 221
Query: 156 VFLSSGKKLVSSSKDKFLRVWDL---DTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSAD 212
V + G + S S D +RVW + C+ ++ GH + + V
Sbjct: 222 VVV--GDLVFSGSADNSVRVWRRGVGKSYACVAVLEGHRRPVKCLAV------------- 356
Query: 213 KELRFYGIKHDSVDGASVNGGDDSSVSS 240
+ D +G G D+SS SS
Sbjct: 357 ------AVAVDFNNGGGPGGDDESSSSS 422
Score = 45.1 bits (105), Expect = 5e-05
Identities = 30/113 (26%), Positives = 52/113 (45%), Gaps = 9/113 (7%)
Frame = +3
Query: 580 SLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGD------CHKSLFAHDDSVMAV 633
+L HK V + ++ DG ++ +G+ D+++ +W D GD +L H +++ +
Sbjct: 42 TLEKHKSAVNALALNEDGSVLYSGACDRSILVWERDGGDGGGEMVVVGALRGHTKAILCL 221
Query: 634 KFVPKTHYVFSVGKDRRVNYWD---ADKFERLLTLEGHHADIWCLAISNRGDF 683
V VFS D V W + + LEGH + CLA++ DF
Sbjct: 222 VVVGDL--VFSGSADNSVRVWRRGVGKSYACVAVLEGHRRPVKCLAVAVAVDF 374
Score = 32.3 bits (72), Expect = 0.36
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 658 KFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWDR 698
K L TLE H + + LA++ G + +G+ DRSI W+R
Sbjct: 24 KHSLLETLEKHKSAVNALALNEDGSVLYSGACDRSILVWER 146
>TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5, TAC
clone:K8K14 (AT5g67320/K8K14_4), partial (19%)
Length = 1089
Score = 52.4 bits (124), Expect = 3e-07
Identities = 28/69 (40%), Positives = 38/69 (54%)
Frame = +1
Query: 121 VLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDT 180
VLAS S D+ V LWDV ++ L GHRD V V F +G+ L S S DK + +W L
Sbjct: 52 VLASASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSIHIWSLKE 231
Query: 181 QHCMQIVSG 189
++ +G
Sbjct: 232 GKIVKTYTG 258
Score = 46.6 bits (109), Expect = 2e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 552 SPDAKYI-AVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLK 610
+P+ K + A A DSTVK+ V+ K SL GH+ V + S +G+ + +GS DK++
Sbjct: 34 NPNKKLVLASASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSIH 213
Query: 611 IWGLDFGDCHKS 622
IW L G K+
Sbjct: 214 IWSLKEGKIVKT 249
Score = 45.8 bits (107), Expect = 3e-05
Identities = 21/66 (31%), Positives = 37/66 (55%), Gaps = 2/66 (3%)
Frame = +1
Query: 162 KKLV--SSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYG 219
KKLV S+S D +++WD++ + ++GH ++SV P YL +GS DK + +
Sbjct: 43 KKLVLASASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSIHIWS 222
Query: 220 IKHDSV 225
+K +
Sbjct: 223 LKEGKI 240
Score = 42.7 bits (99), Expect = 3e-04
Identities = 20/65 (30%), Positives = 36/65 (54%), Gaps = 1/65 (1%)
Frame = +1
Query: 73 STPSSSLIAAGYG-DGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDV 131
S P+ L+ A D ++++ D + G +LNGH+ V ++ ++ G LASGS D +
Sbjct: 31 SNPNKKLVLASASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSI 210
Query: 132 ILWDV 136
+W +
Sbjct: 211 HIWSL 225
Score = 42.0 bits (97), Expect = 5e-04
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 644 SVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWDRTE 700
S D V WD + + + +L GH ++ +A S G+++ +GS D+SI W E
Sbjct: 61 SASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSIHIWSLKE 231
>TC9407 weakly similar to UP|TAF5_YEAST (P38129) Transcription initiation
factor TFIID subunit 5 (TBP-associated factor 5)
(TBP-associated factor 90 kDa) (TAFII-90), partial (4%)
Length = 530
Score = 50.1 bits (118), Expect = 2e-06
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 122 LASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQ 181
LA+ S D+ V +W+V G T L GH+ V D VF G L+++S D R+W + T
Sbjct: 59 LATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTG 238
Query: 182 HCMQIVSGHH 191
+++ GHH
Sbjct: 239 EDIKVYQGHH 268
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 543 NDDVLVVAISPDA----KYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGD 598
N +L +SP+ +Y+A A D TVK+ VD F +L GH+ V S DG
Sbjct: 2 NSYILKCLLSPEFCEPHRYLATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGA 181
Query: 599 LIVTGSADKNLKIWGLDFGDCHKSLFAH 626
++T S+D ++W + G+ K H
Sbjct: 182 YLITASSDTTARLWSMSTGEDIKVYQGH 265
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +2
Query: 600 IVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTHYVFSVGKDRRVNYWDADKF 659
+ T SAD +KIW +D K+L H V F Y+ + D W
Sbjct: 59 LATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTG 238
Query: 660 ERLLTLEGHHADIWCLAI 677
E + +GHH C A+
Sbjct: 239 EDIKVYQGHHKATTCCAL 292
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/67 (28%), Positives = 31/67 (45%)
Frame = +2
Query: 630 VMAVKFVPKTHYVFSVGKDRRVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSH 689
+++ +F Y+ + D V W+ D F TL GH +W S G +++T S
Sbjct: 23 LLSPEFCEPHRYLATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGAYLITASS 202
Query: 690 DRSIRRW 696
D + R W
Sbjct: 203 DTTARLW 223
Score = 33.5 bits (75), Expect = 0.16
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +2
Query: 157 FLSSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKELR 216
F + L ++S D +++W++D + + GH +W YL+T S+D R
Sbjct: 38 FCEPHRYLATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGAYLITASSDTTAR 217
Query: 217 FYGI 220
+ +
Sbjct: 218 LWSM 229
Score = 31.6 bits (70), Expect = 0.61
Identities = 19/74 (25%), Positives = 33/74 (43%)
Frame = +2
Query: 80 IAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILWDVVGE 139
+A D +++I + D T + TL GH+ V ++ G+ L + S D LW +
Sbjct: 59 LATASADHTVKIWNVDGFTLDKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTG 238
Query: 140 TGLFRLRGHRDQVT 153
+ +GH T
Sbjct: 239 EDIKVYQGHHKATT 280
>BP044070
Length = 289
Score = 49.3 bits (116), Expect = 3e-06
Identities = 35/95 (36%), Positives = 50/95 (51%), Gaps = 5/95 (5%)
Frame = +2
Query: 85 GDGSIRILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILW-----DVVGE 139
GD SI D T TL GHK A++A++++ G +LAS S D + + D V
Sbjct: 8 GDRSIGS-DFKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTTSDSVTL 184
Query: 140 TGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLR 174
+ + GH V+D+ F S + LVS+S DK LR
Sbjct: 185 SPMQLYEGHDXGVSDLAFSSDSRFLVSASDDKTLR 289
Score = 47.4 bits (111), Expect = 1e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +2
Query: 145 LRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDLDTQHC-----MQIVSGHHSEIWSVDV 199
L GH+ ++ V F S+G+ L SSS DK LR + T MQ+ GH + +
Sbjct: 59 LTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTTSDSVTLSPMQLYEGHDXGVSDLAF 238
Query: 200 DPGERYLVTGSADKELR 216
R+LV+ S DK LR
Sbjct: 239 SSDSRFLVSASDDKTLR 289
Score = 36.2 bits (82), Expect = 0.025
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 580 SLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDC-----HKSLFAHDDSVMAVK 634
+L GHK + + SS+G L+ + SADK L+ +G D + HD V +
Sbjct: 56 TLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTTSDSVTLSPMQLYEGHDXGVSDLA 235
Query: 635 FVPKTHYVFSVGKDR 649
F + ++ S D+
Sbjct: 236 FSSDSRFLVSASDDK 280
Score = 29.6 bits (65), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = +2
Query: 185 QIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYG 219
Q ++GH I +V R L + SADK LR YG
Sbjct: 53 QTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYG 157
>TC10217 homologue to UP|AAQ54906 (AAQ54906) Cell cycle switch protein
CCS52a, partial (45%)
Length = 640
Score = 48.1 bits (113), Expect = 6e-06
Identities = 33/117 (28%), Positives = 54/117 (45%), Gaps = 7/117 (5%)
Frame = +2
Query: 408 HRSDVRSVTLSSDNSFLLS----TSHNAVKIWNPTTGSCLRTIDSGYGLCSLVLPTNKYG 463
H + V+++ S LL+ T+ ++ WN TT S L +D+G +C+LV N
Sbjct: 239 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNE 418
Query: 464 LVGT---KDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFW 517
LV T I + + + L + H + +A PD + VTG+ D + FW
Sbjct: 419 LVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLXFW 589
Score = 41.2 bits (95), Expect = 8e-04
Identities = 34/132 (25%), Positives = 63/132 (46%), Gaps = 8/132 (6%)
Frame = +2
Query: 77 SSLIAAGYGDGSI--RILDSDKGTCETTLNGHKGAVTALRYNQAGSVLASGSKDNDVILW 134
SSL+++G D +I R + + + + L+GHK V L+++ LASG DN + +W
Sbjct: 23 SSLLSSGGRDKNIYQRXIRAQEXYV-SKLSGHKSXVCGLKWSYDNRELASGGNDNRLFVW 199
Query: 135 DVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSS---SKDKFLRVWDLDTQ---HCMQIVS 188
+ + + H V + + L++S + D+ +R W+ T CM S
Sbjct: 200 NQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGS 379
Query: 189 GHHSEIWSVDVD 200
+ +WS +V+
Sbjct: 380 QVCNLVWSKNVN 415
Score = 36.6 bits (83), Expect = 0.019
Identities = 33/130 (25%), Positives = 52/130 (39%), Gaps = 4/130 (3%)
Frame = +2
Query: 489 HGGSLRSIAALPDKNSFVT---GSADHDVKFWEYQIKQKPGQATKQLAVSN-VRTMKMND 544
H ++++IA P + + G+AD ++FW V N V + +N+
Sbjct: 239 HTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNE 418
Query: 545 DVLVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGS 604
V S + + V T +L GH VL + IS DG IVTG+
Sbjct: 419 LVSTHGYS-----------QNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGA 565
Query: 605 ADKNLKIWGL 614
D+ L W +
Sbjct: 566 GDETLXFWNV 595
Score = 36.6 bits (83), Expect = 0.019
Identities = 36/163 (22%), Positives = 54/163 (33%), Gaps = 46/163 (28%)
Frame = +2
Query: 581 LYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSLFAHDDSVMAVKFVPKTH 640
L GHK V + S D + +G D L +W H +V A+ + P H
Sbjct: 104 LSGHKSXVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLH 283
Query: 641 YVFSVG---KDRRVNYWDADK--------------------------------------- 658
+ + G DR + +W+
Sbjct: 284 GLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVW 463
Query: 659 ----FERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
+L TL GH + LAIS G IVTG+ D ++ W+
Sbjct: 464 RYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLXFWN 592
Score = 35.8 bits (81), Expect = 0.032
Identities = 45/181 (24%), Positives = 77/181 (41%), Gaps = 8/181 (4%)
Frame = +2
Query: 405 LQGHRSDVRSVTLSSDNSFLLSTSH-NAVKIWNP-TTGSCLRTIDSGYGLCSLVLPTNKY 462
L GH+S V + S DN L S + N + +WN +T L+ + + ++ + +
Sbjct: 104 LSGHKSXVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLH 283
Query: 463 GLV----GTKDGTIEIIDIGSGTCLEAIEAHGGSLRSIAALPDKNSFVT--GSADHDVKF 516
GL+ GT D I + + + L ++ G + ++ + N V+ G + + +
Sbjct: 284 GLLASGGGTADRCIRFWNTTTNSHLSCMDT-GSQVCNLVWSKNVNELVSTHGYSQNQIIV 460
Query: 517 WEYQIKQKPGQATKQLAVSNVRTMKMNDDVLVVAISPDAKYIAVALLDSTVKVHFVDTFK 576
W Y K LA T + VL +AISPD + I D T + F + F
Sbjct: 461 WRYPTMSK-------LATLTGHTYR----VLYLAISPDGQTIVTGAGDET--LXFWNVFP 601
Query: 577 F 577
F
Sbjct: 602 F 604
>BP050721
Length = 562
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/111 (27%), Positives = 48/111 (42%), Gaps = 2/111 (1%)
Frame = -1
Query: 68 VTSIASTPSSSLIAAGYGDGSIRILDSDKGTCETTLNGHKGAVTALR--YNQAGSVLASG 125
V I+ + + I AG D ++R+LD G GH L + +A G
Sbjct: 502 VNCISMSNDGNCILAGCLDSTVRLLDRTSGELLQEYKGHTNKSYKLDCCLTNTDAHVAGG 323
Query: 126 SKDNDVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVW 176
S+D + WD+V + R H VT V + ++S+S D +RVW
Sbjct: 322 SEDGFIYFWDLVDAYVVSSFRAHTSVVTSVSYHPKENCMLSASVDGTIRVW 170
>TC11250 homologue to UP|AAQ72359 (AAQ72359) B-type cell cycle switch
protein ccs52B, partial (28%)
Length = 564
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 427 TSHNAVKIWNPTTGSCLRTIDSGYGLCSLVLPTNKYGLVGT---KDGTIEIIDIGSGTCL 483
T+ ++ WN T G L +D+G +C+L N +V T I + S + +
Sbjct: 77 TADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMVWKYPSLSKV 256
Query: 484 EAIEAHGGSLRSIAALPDKNSFVTGSADHDVKFW 517
+ H + +A PD + VTG+ D ++FW
Sbjct: 257 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFW 358
Score = 38.5 bits (88), Expect = 0.005
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = +2
Query: 508 GSADHDVKFWEYQIKQKPGQATKQLAVSNVRTMKMNDDVLVVAISPDAKYIAVALLDSTV 567
G+AD ++FW + V N+ K N + +V I V S
Sbjct: 74 GTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSK-NVNEIVSTHGYSQNQIMVWKYPSLS 250
Query: 568 KVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGL 614
KV +L GH + VL + +S DG IVTG+ D+ L+ W +
Sbjct: 251 KV---------ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNV 364
Score = 35.8 bits (81), Expect = 0.032
Identities = 16/48 (33%), Positives = 26/48 (53%)
Frame = +2
Query: 650 RVNYWDADKFERLLTLEGHHADIWCLAISNRGDFIVTGSHDRSIRRWD 697
++ W ++ TL GH + LA+S G IVTG+ D ++R W+
Sbjct: 218 QIMVWKYPSLSKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWN 361
Score = 32.3 bits (72), Expect = 0.36
Identities = 23/105 (21%), Positives = 47/105 (43%), Gaps = 5/105 (4%)
Frame = +2
Query: 121 VLASGSKDNDVILWDVVGETGLFRLRGHRD---QVTDVVFLSSGKKLVSSS--KDKFLRV 175
V G+ D + W+ L H D QV ++ + + ++VS+ + V
Sbjct: 62 VSGGGTADRCIRFWNTTNGHQL----NHVDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMV 229
Query: 176 WDLDTQHCMQIVSGHHSEIWSVDVDPGERYLVTGSADKELRFYGI 220
W + + ++GH + + + P + +VTG+ D+ LRF+ +
Sbjct: 230 WKYPSLSKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNV 364
Score = 31.2 bits (69), Expect = 0.80
Identities = 26/109 (23%), Positives = 48/109 (43%), Gaps = 3/109 (2%)
Frame = +2
Query: 73 STPSSSLIAAGYG--DGSIRILDSDKGTCETTLN-GHKGAVTALRYNQAGSVLASGSKDN 129
S S+L+ +G G D IR ++ G ++ G + A N V G N
Sbjct: 38 SPHQSNLLVSGGGTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNEIVSTHGYSQN 217
Query: 130 DVILWDVVGETGLFRLRGHRDQVTDVVFLSSGKKLVSSSKDKFLRVWDL 178
+++W + + L GH +V + G+ +V+ + D+ LR W++
Sbjct: 218 QIMVWKYPSLSKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNV 364
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,732,383
Number of Sequences: 28460
Number of extensions: 226385
Number of successful extensions: 2547
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of query: 943
length of database: 4,897,600
effective HSP length: 99
effective length of query: 844
effective length of database: 2,080,060
effective search space: 1755570640
effective search space used: 1755570640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0012c.1