BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012b.5
(815 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV779182 316 8e-87
BF177903 275 2e-74
AW720189 256 8e-69
BF177720 232 2e-61
TC8985 similar to UP|CAD27794 (CAD27794) Phosphatidylinositol-4-... 186 2e-47
TC10780 similar to UP|O04095 (O04095) Phosphatidylinositol-4-pho... 114 8e-26
TC18435 67 1e-11
BP065051 52 4e-07
BP055186 49 3e-06
AV421861 41 7e-04
TC14950 PIR|S04520|S04520 histone H3 (clone pH3c-1) - alfalfa {M... 31 0.69
TC9938 weakly similar to GB|AAM97131.1|22531255|AY136466 ribonuc... 30 1.5
TC9271 weakly similar to UP|Q9SFG3 (Q9SFG3) F2O10.5 protein (At3... 29 3.4
TC12493 similar to UP|Q9LP77 (Q9LP77) T1N15.9, partial (35%) 28 4.5
AV779959 28 5.8
TC19664 similar to UP|Q9ZSQ7 (Q9ZSQ7) Protein phosphatase 2C hom... 28 5.8
TC15917 similar to AAQ56792 (AAQ56792) At1g71010, partial (15%) 28 5.8
BP053409 28 7.6
TC16048 similar to UP|BAD08735 (BAD08735) 1-phosphatidylinositol... 27 9.9
TC16066 similar to UP|Q94CI5 (Q94CI5) Protein kinase AtSIK, part... 27 9.9
>AV779182
Length = 533
Score = 316 bits (810), Expect = 8e-87
Identities = 154/178 (86%), Positives = 165/178 (92%)
Frame = -3
Query: 500 DRFMIKTLRKSELKIFLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFAVMGNM 559
DRFMIKTLR+SE+K+ LRMLPDYHHHVKSYENTL+TKFFGLHRI PSSGQKFRF VMGNM
Sbjct: 531 DRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLVTKFFGLHRIIPSSGQKFRFVVMGNM 352
Query: 560 FCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYSFFLEPSWRDSLLNQIKIDS 619
FCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNY FFLEPSWR+SLL QI+IDS
Sbjct: 351 FCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYCFFLEPSWRESLLKQIEIDS 172
Query: 620 KFLEAQHIMDYSLLLGVHYRAPQHVRPLMSYNQRSISTDGLAVLAEEDPLEDEVFNYP 677
KFLE Q IMDYSLLLGVHYRAPQ + P SY+Q S++ DGLAVLAEEDPLEDEV+NYP
Sbjct: 171 KFLEEQRIMDYSLLLGVHYRAPQQLHPRPSYHQ-SLNADGLAVLAEEDPLEDEVYNYP 1
>BF177903
Length = 485
Score = 275 bits (704), Expect = 2e-74
Identities = 136/158 (86%), Positives = 147/158 (92%), Gaps = 1/158 (0%)
Frame = +3
Query: 333 EANAKMPILEREYMQGVLISELVLDK-FLSKSRKERRLQKKLAKEIKRPGEAIIKGHRSY 391
EANAK+PILEREYMQGVLISE VL+ F S +RK ++LQ+KLAKEI+RPGE IIKGHRSY
Sbjct: 12 EANAKIPILEREYMQGVLISEQVLNSSFSSLARKAKQLQRKLAKEIQRPGETIIKGHRSY 191
Query: 392 DLMLSLQLGIRYTVGKITPVPRREVRASDFGSKASFWMNFPREGSPLTPSHQSEDFKWKD 451
DLMLSLQLGIRYTVGKITP+ RREVRASDFG +ASFWMNFP+EGS LTP HQSEDFKWKD
Sbjct: 192 DLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKD 371
Query: 452 YCPMVFRNLRELFKIDAADYMISICGNDALRELSSPGK 489
YCPMVFRNLRELFKIDAADYM+SICGNDALRELSSPGK
Sbjct: 372 YCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGK 485
>AW720189
Length = 505
Score = 256 bits (655), Expect = 8e-69
Identities = 129/167 (77%), Positives = 136/167 (81%), Gaps = 10/167 (5%)
Frame = +3
Query: 179 SGKGTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYVGTWTCGLKDGKGTFYPKGSHLT 238
SGKGTLTW+NGDS+EGSWLNGMMHG G YTWS GGCYVGTWT GLKDGKGTFYP+GS L
Sbjct: 3 SGKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPRGSCLP 182
Query: 239 SAQEIYLNALRKRGLLPDLRKQNLVR----------GVKVGENQRSNRVSSDKLAKGNLL 288
SAQEIYLNALRKRGLLPDLRKQ V VKVGENQRS+ SSDKLAKGNLL
Sbjct: 183 SAQEIYLNALRKRGLLPDLRKQKQVHIHHAASVDMGDVKVGENQRSSHFSSDKLAKGNLL 362
Query: 289 NLEDSSRRNVSLERRWSLEVSIEKGIGHDSTLGSAESVSQRKDKEAN 335
NLE S +NVSLERRWSLEVSIEK IGHDS LGS +SV + DKEAN
Sbjct: 363 NLEQSRTKNVSLERRWSLEVSIEKVIGHDSKLGSTDSVFETGDKEAN 503
Score = 44.7 bits (104), Expect = 6e-05
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 44 GELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGA 98
G L NG+S+ G+ G G Y WSD Y G W RG++ G G +P G+
Sbjct: 12 GTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF-YPRGS 173
Score = 43.5 bits (101), Expect = 1e-04
Identities = 19/51 (37%), Positives = 24/51 (46%)
Frame = +3
Query: 65 GHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQGTGKY 115
G GT W + +EG W GM HG G W G Y G ++ G G G +
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/59 (38%), Positives = 27/59 (44%)
Frame = +3
Query: 88 GNGKIRWPYGAVYEGEFSGGYIQGTGKYIGSDHLTYKGRWRLNLKHGLGYQVYPNGDIL 146
G G + W G +EG + G + G G Y SD Y G W LK G G YP G L
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKG-TFYPRGSCL 179
Score = 36.6 bits (83), Expect = 0.016
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 110 QGTGKYIGSDHLTYKGRWRLNLKHGLGYQVYPNGDILEGSWIQGTPEGPGKY 161
+GT ++ D +++G W + HGLG + +G G+W +G +G G +
Sbjct: 9 KGTLTWLNGD--SFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
>BF177720
Length = 509
Score = 232 bits (592), Expect = 2e-61
Identities = 109/110 (99%), Positives = 109/110 (99%)
Frame = +1
Query: 1 MGEHFLMQRETKSFNASSEINNNLSLVTIGEAGHSSEIDSFSVGELLLSNGESYSGTLFG 60
MGEHFLMQRETKSFNASSEINNNLSLVT GEAGHSSEIDSFSVGELLLSNGESYSGTLFG
Sbjct: 178 MGEHFLMQRETKSFNASSEINNNLSLVTNGEAGHSSEIDSFSVGELLLSNGESYSGTLFG 357
Query: 61 NTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQ 110
NTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQ
Sbjct: 358 NTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQ 507
Score = 54.3 bits (129), Expect = 8e-08
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +1
Query: 159 GKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYVGT 218
G+ +NG Y G + G T G GT W + YEG W GM HG G W G Y G
Sbjct: 307 GELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGE 486
Query: 219 WTCG 222
++ G
Sbjct: 487 FSGG 498
Score = 49.7 bits (117), Expect = 2e-06
Identities = 23/65 (35%), Positives = 32/65 (48%)
Frame = +1
Query: 135 LGYQVYPNGDILEGSWIQGTPEGPGKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEG 194
+G + NG+ G+ TPEG G Y W++ VY G + G G G + W G YEG
Sbjct: 304 VGELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEG 483
Query: 195 SWLNG 199
+ G
Sbjct: 484 EFSGG 498
Score = 41.2 bits (95), Expect = 7e-04
Identities = 20/55 (36%), Positives = 26/55 (46%), Gaps = 1/55 (1%)
Frame = +1
Query: 182 GTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYVGTWTCGLKDGKGTF-YPKGS 235
G L NG+SY G+ G G Y WS Y G W G++ G G +P G+
Sbjct: 307 GELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGA 471
>TC8985 similar to UP|CAD27794 (CAD27794) Phosphatidylinositol-4-phosphate
5-kinase (Fragment) , partial (13%)
Length = 726
Score = 186 bits (471), Expect = 2e-47
Identities = 95/119 (79%), Positives = 104/119 (86%)
Frame = +1
Query: 691 SVVVGSHMRGGRLRASSAGDEVVDLLLPGTARLQIQLGVNMPSRAEQNQIIGKQEKQMFH 750
SVVVGSH+RG RLRAS+AGDE VDLLLPGTARLQI LGVNMPSRAEQ I GK++ QMFH
Sbjct: 1 SVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIPLGVNMPSRAEQ--IPGKEDMQMFH 174
Query: 751 EVNDVVLYLGIIDILQDYNMTKKLEHAYKSLQFDSVSISVVDPAFYSRRFLEFIQKVFP 809
E DVVLYLGIIDILQ+YNMTKK+EHAYKSLQFDS++IS VDP FYSRRFL FI + P
Sbjct: 175 EAYDVVLYLGIIDILQEYNMTKKIEHAYKSLQFDSITISAVDPTFYSRRFLNFIHQSVP 351
>TC10780 similar to UP|O04095 (O04095) Phosphatidylinositol-4-phosphate
5-kinase isolog, 89655-95590, partial (11%)
Length = 583
Score = 114 bits (284), Expect = 8e-26
Identities = 60/99 (60%), Positives = 79/99 (79%), Gaps = 4/99 (4%)
Frame = +3
Query: 715 LLLPGTARLQIQLGVNMPSRAE---QNQIIGKQEKQMFHEVNDVVLYLGIIDILQDYNMT 771
LLLPGTARL++QLGVNMP++A Q + + E ++F EV DVVLY+GIIDILQ+YNM
Sbjct: 3 LLLPGTARLRVQLGVNMPAQATRKLQEDKVEESEVELF-EVYDVVLYMGIIDILQEYNMK 179
Query: 772 KKLEHAYKSLQFDSVSISVVDPAFYSRRFLEFIQ-KVFP 809
KK+EHAYKSL+ D ++ISV +P Y++RFL F++ KVFP
Sbjct: 180 KKMEHAYKSLKNDPMAISVTEPKIYAKRFLNFMERKVFP 296
>TC18435
Length = 505
Score = 67.0 bits (162), Expect = 1e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1
Query: 784 DSVSISVVDPAFYSRRFLEFIQKVFPPNASTG 815
DSVSISVVDPAFYSRRFLEFIQKVFPPNASTG
Sbjct: 1 DSVSISVVDPAFYSRRFLEFIQKVFPPNASTG 96
>BP065051
Length = 496
Score = 52.0 bits (123), Expect = 4e-07
Identities = 27/44 (61%), Positives = 34/44 (76%)
Frame = +2
Query: 11 TKSFNASSEINNNLSLVTIGEAGHSSEIDSFSVGELLLSNGESY 54
TKS + S I + +S++T GEAGHS+EI F VGELLLSNGE+Y
Sbjct: 368 TKSLDVISAIGS-ISILTNGEAGHSTEIPGFRVGELLLSNGETY 496
>BP055186
Length = 531
Score = 48.9 bits (115), Expect = 3e-06
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = -1
Query: 132 KHGLGYQVYPNGDILEGSWIQGTPEGPGKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDS 191
+ GLG + NGD+ +GSW G G + + + + N G +G+G +GD+
Sbjct: 528 RSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDA 349
Query: 192 YEGSWLNGMMHGFGAYTWSGGGCYVGTWTCGL 223
Y G++ +G HG + G Y W G+
Sbjct: 348 YFGNFKDGWRHGQFLCINADGTRYTEIWEHGV 253
Score = 46.2 bits (108), Expect = 2e-05
Identities = 23/91 (25%), Positives = 43/91 (46%)
Frame = -1
Query: 111 GTGKYIGSDHLTYKGRWRLNLKHGLGYQVYPNGDILEGSWIQGTPEGPGKYTWTNGNVYV 170
G G + + ++G WR ++ HG G+ + D ++ +G G G++ +G+ Y
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 171 GNMKGGTMSGKGTLTWINGDSYEGSWLNGMM 201
GN K G G+ +G Y W +G++
Sbjct: 342 GNFKDGWRHGQFLCINADGTRYTEIWEHGVL 250
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -1
Query: 179 SGKGTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYVGTWTCGLKDGKGTFYPK 233
SG GT + NGD ++GSW + +MHG G + + + + G +G+G FY K
Sbjct: 525 SGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTK 361
Score = 38.1 bits (87), Expect = 0.006
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 157 GPGKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYV 216
G G + + NG+++ G+ + M GKG + D + ++ G +G G + G Y
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 217 GTWTCGLKDGK 227
G + G + G+
Sbjct: 342 GNFKDGWRHGQ 310
Score = 35.4 bits (80), Expect = 0.036
Identities = 20/89 (22%), Positives = 36/89 (39%)
Frame = -1
Query: 65 GHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQGTGKYIGSDHLTYK 124
G GT+ + + +++G WR + HG G + + F G G G++ Y
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 125 GRWRLNLKHGLGYQVYPNGDILEGSWIQG 153
G ++ +HG + +G W G
Sbjct: 342 GNFKDGWRHGQFLCINADGTRYTEIWEHG 256
>AV421861
Length = 455
Score = 41.2 bits (95), Expect = 7e-04
Identities = 20/41 (48%), Positives = 22/41 (52%)
Frame = +1
Query: 39 DSFSVGELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEG 79
DS E SNG+ Y G + G P G G Y WSD VYEG
Sbjct: 331 DSGRFEEKSFSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 39.7 bits (91), Expect = 0.002
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 162 TWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEG 194
+++NG+VY+G +KG GKG TW +G YEG
Sbjct: 355 SFSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 35.8 bits (81), Expect = 0.028
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = +1
Query: 140 YPNGDILEGSWIQGTPEGPGKYTWTNGNVYVG 171
+ NGD+ G P G GKYTW++G VY G
Sbjct: 358 FSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 32.7 bits (73), Expect = 0.24
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 188 NGDSYEGSWLNGMMHGFGAYTWSGGGCYVG 217
NGD Y G + HG G YTWS G Y G
Sbjct: 364 NGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 29.3 bits (64), Expect = 2.6
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = +1
Query: 71 WSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEG 102
+S+ VY G + + HG GK W G VYEG
Sbjct: 358 FSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 97 GAVYEGEFSGGYIQGTGKYIGSDHLTYKG 125
G VY GE G G GKY SD Y+G
Sbjct: 367 GDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
>TC14950 PIR|S04520|S04520 histone H3 (clone pH3c-1) - alfalfa {Medicago
sativa;}, complete
Length = 641
Score = 31.2 bits (69), Expect = 0.69
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -2
Query: 63 PEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQGTGKYIGSDHLT 122
P+G G+ + R ++ G R G+ G G P+G SGG G +G+ H
Sbjct: 214 PQGDGSRAETVRLLHSSGGRSGLPGGLGGELLPWGFA-----SGGLASG---LLGTSHGE 59
Query: 123 YKGRWR 128
+ G WR
Sbjct: 58 WGGEWR 41
>TC9938 weakly similar to GB|AAM97131.1|22531255|AY136466
ribonucleoprotein-like {Arabidopsis thaliana;}, partial
(9%)
Length = 633
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/110 (23%), Positives = 38/110 (33%)
Frame = +1
Query: 96 YGAVYEGEFSGGYIQGTGKYIGSDHLTYKGRWRLNLKHGLGYQVYPNGDILEGSWIQGTP 155
YG+ + G GGY G Y G L + GR+ + G Y G++ G
Sbjct: 43 YGSEFGGY--GGYAGAMGPYRGDPSLGFAGRYGGSFSRGYDLGGYGGASESYGAYGAGAA 216
Query: 156 EGPGKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEGSWLNGMMHGFG 205
G G + Y G G G + + G + G H +G
Sbjct: 217 AGGGS---SAAGAYQGGYDASLAGGYGGASGGSFYGSRGGYGAGRYHPYG 357
>TC9271 weakly similar to UP|Q9SFG3 (Q9SFG3) F2O10.5 protein (At3g05990),
partial (32%)
Length = 1035
Score = 28.9 bits (63), Expect = 3.4
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1
Query: 207 YTWSGGGCYVG------TWTCGLKDGKGTFYPKGSHLTSAQEIYLNALRKRGLLPDLRKQ 260
Y+W+G C G T + G+ P +++T+ I+L G +P+L
Sbjct: 157 YSWTGITCSEGPRIRVVTLNLTNMNLSGSLSPFVANMTALANIWLGNNSLSGQIPELSSL 336
Query: 261 NLVRGVKVGENQRSNRVSSDKLAKGNLLNLEDSSRRNVSL 300
L+ + + +NQ + + S + GN+ L + +N +L
Sbjct: 337 TLLETLHLEDNQFTGEIPS---SLGNISTLHEVFLQNNNL 447
>TC12493 similar to UP|Q9LP77 (Q9LP77) T1N15.9, partial (35%)
Length = 837
Score = 28.5 bits (62), Expect = 4.5
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 603 LEPSWRDSLLNQIKIDSKFLEAQHIMDYSLLLGVHYRAPQHVR-PLMSYNQRS 654
+ P W L+NQ+ L H+ ++L +H AP H+ L+S ++RS
Sbjct: 383 IAPKWDQILMNQLPHLLNLLPELHLRRCNILQPLHRHAPPHLHGGLVSSSKRS 225
>AV779959
Length = 426
Score = 28.1 bits (61), Expect = 5.8
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = -1
Query: 182 GTLTWINGDSYEGSWLNGMMH 202
GT +I+GD+Y+ WLN + H
Sbjct: 153 GTQKFISGDTYDSKWLNHL*H 91
>TC19664 similar to UP|Q9ZSQ7 (Q9ZSQ7) Protein phosphatase 2C homolog,
partial (9%)
Length = 426
Score = 28.1 bits (61), Expect = 5.8
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +1
Query: 205 GAYTWSGGGCYVGTWTC 221
G + W GCY+G WTC
Sbjct: 205 GLFWW*NEGCYLG*WTC 255
>TC15917 similar to AAQ56792 (AAQ56792) At1g71010, partial (15%)
Length = 521
Score = 28.1 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 618 DSKFLEAQHIMDYSLLLGVHYRAPQHVRPLMSY 650
D+ FL + +MDYSLL+GV + V ++ Y
Sbjct: 95 DTSFLASVDVMDYSLLVGVDEEKNELVLGIIDY 193
>BP053409
Length = 441
Score = 27.7 bits (60), Expect = 7.6
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 20/98 (20%)
Frame = -2
Query: 627 IMDYSLLLGVHYRAPQHVRPLMSYNQRSISTDGLA---------VLAEEDPLEDEVFNYP 677
++D SL + Y AP+ P S RSIS DG+ +L EE L + P
Sbjct: 395 LLDKSLEVQGAY-APRDTSPESSRRGRSISFDGVPSLVPREFHFLLFEEPQLREPELVEP 219
Query: 678 QGLVLVPRGAG-----------DNSVVVGSHMRGGRLR 704
+ + PRG G VV G RG R R
Sbjct: 218 ELVEXRPRGGGARGARARGEVDPGEVVRGXRARGPRXR 105
>TC16048 similar to UP|BAD08735 (BAD08735)
1-phosphatidylinositol-3-phosphate 5-kinase-like,
partial (7%)
Length = 691
Score = 27.3 bits (59), Expect = 9.9
Identities = 11/19 (57%), Positives = 16/19 (83%)
Frame = +3
Query: 618 DSKFLEAQHIMDYSLLLGV 636
D+ FL + ++MDYSLL+GV
Sbjct: 66 DTAFLASIYVMDYSLLVGV 122
>TC16066 similar to UP|Q94CI5 (Q94CI5) Protein kinase AtSIK, partial (7%)
Length = 597
Score = 27.3 bits (59), Expect = 9.9
Identities = 15/36 (41%), Positives = 17/36 (46%), Gaps = 1/36 (2%)
Frame = -2
Query: 57 TLFGNTPEGHGTYVWS-DRCVYEGGWRRGMRHGNGK 91
T G EGH W DRC E WRRG+ G+
Sbjct: 257 TSTGRKEEGHSRPSWR*DRCRGE*WWRRGVTKLRGR 150
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,004,169
Number of Sequences: 28460
Number of extensions: 205606
Number of successful extensions: 1019
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of query: 815
length of database: 4,897,600
effective HSP length: 98
effective length of query: 717
effective length of database: 2,108,520
effective search space: 1511808840
effective search space used: 1511808840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0012b.5