BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012a.3
(952 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 47 2e-05
TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%) 46 3e-05
AV769326 44 2e-04
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 42 3e-04
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 42 5e-04
BP072816 42 6e-04
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 40 0.001
BP044109 40 0.001
TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-... 40 0.002
AW719831 40 0.002
TC7995 similar to PIR|S63686|S63686 sterol 24-C-methyltransferas... 39 0.004
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 39 0.004
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 39 0.005
TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Ce... 39 0.005
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 38 0.009
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 37 0.011
TC8573 similar to UP|Q9SIH5 (Q9SIH5) At2g36090 protein, partial ... 37 0.015
TC8946 homologue to GB|AAM66972.1|21617922|AY088650 pyridoxine b... 37 0.019
TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ki... 37 0.019
AW720177 37 0.019
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 46.6 bits (109), Expect = 2e-05
Identities = 62/264 (23%), Positives = 98/264 (36%), Gaps = 11/264 (4%)
Frame = +2
Query: 432 PTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPI 491
PT++ P + P R++R SS L P ++ S P +P
Sbjct: 122 PTQISPR-QCSCSARQPWRLSRQRCSSSPWLLPPQT--------PTTSPAFSPSTPSSP- 271
Query: 492 PESQPAEQTTSPPHSPRSSFFQPSPTEAPLW-----NLLQNQPSRSDEPTSLLTIPYDPL 546
P + + TSPP S +P+ P W N Q+ PSR+ P++ + P
Sbjct: 272 PSTTTSPSPTSPPRSTNGPQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPR 451
Query: 547 SSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPI---NVVD 603
SS P P Q +P + P +S P + +DS+ T P+ N
Sbjct: 452 SSTRSPTAPPSPPQC-TKPPAPPRAPPDSSTSPTSAAGKSDSAPRTTTAPSPLRSSNP*R 628
Query: 604 SSP--SNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYP-GPRPERLVDPDEPILANPI 660
SP S +S S+R F P P++ P P P + P P+ + +
Sbjct: 629 KSPTTSPSSRSVRFF------------------PPPQQKPLHPHPLSRISP--PLCPSTV 748
Query: 661 QEADPLVQQAHPVPDQQEPIQPDP 684
+ P + P ++ QP P
Sbjct: 749 ARSSPTLS-----PPRRTRTQPSP 805
Score = 37.0 bits (84), Expect = 0.015
Identities = 43/167 (25%), Positives = 63/167 (36%), Gaps = 10/167 (5%)
Frame = +2
Query: 437 PAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFD-ALPISALLQHSSNPLTP----- 490
P + T PP + + H S P+ TS + + P S+ ++ P P
Sbjct: 326 PQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPRSSTRSPTAPPSPPQCTKP 505
Query: 491 -IPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPT--SLLTIPYDPLS 547
P P + +TSP + S P T AP L + P R T S ++ + P
Sbjct: 506 PAPPRAPPDSSTSPTSAAGKSDSAPRTTTAPS-PLRSSNP*RKSPTTSPSSRSVRFFPPP 682
Query: 548 SEPIIHEQPEPNQTEPQ-PRTSDHSAPRASARPAARTTDTDSSTAFT 593
+ +H P + P P T S+P S P RT S T T
Sbjct: 683 QQKPLHPHPLSRISPPLCPSTVARSSPTLS--PPRRTRTQPSPTTST 817
>TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%)
Length = 799
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 9/129 (6%)
Frame = +1
Query: 490 PIPESQPAEQTTSP-PHSPRSS-------FFQPSPTEAPLWNLLQNQPSRSDEPTSLLTI 541
P P SQP T P HSP S PSP+ P + + P +S+ PTS +
Sbjct: 43 PSPTSQPPYIATPPNTHSPTSQPPNTQTPANTPSPSSQPPY---LSTPPKSNSPTSQPPV 213
Query: 542 PYDPLSSEPIIHEQPEPNQTEPQPRTSDHS-APRASARPAARTTDTDSSTAFTPVSFPIN 600
P + PI P P P T+ S AP S P A TP S P+
Sbjct: 214 AQTPRAVTPISSPSSSPTSNSPYPSTNPPSLAPSISTSP----------PALTPASTPVP 363
Query: 601 VVDSSPSNN 609
S PS +
Sbjct: 364 ATASPPSQS 390
>AV769326
Length = 262
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/95 (32%), Positives = 43/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 488 LTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLS 547
++ P PA T+SP P ++ PSP P + PS P S + P P
Sbjct: 2 ISSAPRCFPATTTSSPSSPPSTTPTTPSPPSDP-----HSPPSN---PPSAASDPNSPSL 157
Query: 548 SEPIIHEQPE-PNQTEPQPRTSDHSAPRASARPAA 581
+ P + + P P TEP +S SAP AS R +A
Sbjct: 158 TAPSLQKPPSSPTSTEPPSSSSTPSAPSASTRSSA 262
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 42.4 bits (98), Expect = 3e-04
Identities = 41/165 (24%), Positives = 67/165 (39%), Gaps = 3/165 (1%)
Frame = +3
Query: 446 EPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPH 505
+PPA ++ +S+P+ + P S+L Q SS+ PI ++PPH
Sbjct: 15 QPPATAAATARSTSEPSQSQPP------LQPPSSLPQTSSSTTPPI---------SAPPH 149
Query: 506 SPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQP 565
P++ P+PT P N N P + PI + P P T PQP
Sbjct: 150 PPQN----PNPTPIPAPNPNPN--------------PIQIQNPNPIHNPNPRPTPTPPQP 275
Query: 566 R---TSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSPS 607
R T + + P +P+ + + + P P + +S+PS
Sbjct: 276 RPPPTFNRAPPPQQQQPSHFSHFSSLPPSSAPSPSPASSFNSTPS 410
Score = 33.9 bits (76), Expect = 0.12
Identities = 45/192 (23%), Positives = 68/192 (34%)
Frame = +3
Query: 551 IIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSPSNNS 610
++ QP TS+ S + +P + T SST TP PI+ P N +
Sbjct: 3 LMDPQPPATAAATARSTSEPSQSQPPLQPPSSLPQTSSST--TP---PISAPPHPPQNPN 167
Query: 611 ESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQA 670
P+P P P P NPIQ +Q
Sbjct: 168 ------------------------PTPIPAPNPNP------------NPIQ-----IQNP 224
Query: 671 HPVPDQQEPIQPDPEPEQSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASE 730
+P+ + +P P P Q + R+P P + P + + P + SP AS
Sbjct: 225 NPIHNPNP--RPTPTPPQPRPPPTFNRAPPP--QQQQPSHFSHFSSLPPSSAPSPSPASS 392
Query: 731 AHSSNHPASPAP 742
+S+ P+ PAP
Sbjct: 393 FNSTPSPSIPAP 428
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 42.0 bits (97), Expect = 5e-04
Identities = 55/207 (26%), Positives = 71/207 (33%)
Frame = +1
Query: 367 LPPAPEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKPDDGDDDDSEDGPPQKKKKKV 426
+P P+ PSP + + S P V + P + PP+
Sbjct: 28 IPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPS--- 198
Query: 427 RIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSN 486
PT P + +T P H P T PIS +
Sbjct: 199 -----PTSQPPYIPLPPKTPSPIS---QPPHVPTPPSTPS---------PISQPPYTPTP 327
Query: 487 PLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPL 546
P TP P SQP T +PP++P S QP T P PS +++P IP P
Sbjct: 328 PKTPSPTSQP-PHTPTPPNTP-SPISQPPYTPTP-----PKTPSPTNQPPH---IPSPPN 477
Query: 547 SSEPIIHEQPEPNQTEPQPRTSDHSAP 573
SS P QP PN P S S P
Sbjct: 478 SSSPT--SQP-PNTPSPPKTPSPTSQP 549
Score = 32.3 bits (72), Expect = 0.36
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Frame = +1
Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSP-TEAPLWNLLQNQPSRSDEPTSLLTIP 542
S P P+P P+ + PPH P PSP ++ P PS + +P T P
Sbjct: 205 SQPPYIPLPPKTPSP-ISQPPHVPTPP-STPSPISQPPYTPTPPKTPSPTSQPPHTPTPP 378
Query: 543 Y--DPLSSEPIIHEQPE-PNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAF-TPVSFP 598
P+S P P+ P+ T P +P S+ P ++ +T S +P S P
Sbjct: 379 NTPSPISQPPYTPTPPKTPSPTNQPPHI---PSPPNSSSPTSQPPNTPSPPKTPSPTSQP 549
Query: 599 IN 600
N
Sbjct: 550 PN 555
>BP072816
Length = 492
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +1
Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPY 543
SS+PL P P + +TSP +P ++ P T P N ++PS S +PT+ P
Sbjct: 133 SSSPL-PSPPTTLHAPSTSPSSAPSATAAPPPSTPTPAANT-SSKPSTSSKPTTSAAPPA 306
Query: 544 DPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAA 581
L S P P+P P +++ AP +++ P A
Sbjct: 307 SSLLSTP-----PKPAGPPSNPSSTNSPAPASTSAPHA 405
Score = 31.2 bits (69), Expect = 0.81
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 543 YDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVV 602
+ P SS P P T P TS SAP A+A P T ++T+ P +
Sbjct: 109 HSPSSSSSSSSPLPSPPTTLHAPSTSPSSAPSATAAPPPSTPTPAANTSSKPSTSSKPTT 288
Query: 603 DSSPSNNS 610
++P +S
Sbjct: 289 SAAPPASS 312
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/178 (26%), Positives = 65/178 (36%), Gaps = 14/178 (7%)
Frame = -3
Query: 484 SSNPLTPIPESQPAEQTT-----SPPHSPRSSFFQPSPTEA---------PLWNLLQNQP 529
SS P P P E T SPP P S QP P +A P Q
Sbjct: 669 SSTPHYPPPHRPYYENTLPSLPPSPPPPPHSRTSQPPPPQADTAAPGTPPPPELRRDRQK 490
Query: 530 SRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSS 589
RS +S P P P P+PN+T + R + SAP P TT S
Sbjct: 489 QRSSRTSSRTLSPRSPRPPSPSCSPPPKPNRTAKRRRLA--SAP--DPPPMMMTT---KS 331
Query: 590 TAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPER 647
+ T +S + S+PS E++R+ ++ E+ + P P+R
Sbjct: 330 SPGTVISAQTHESPSAPSPTEENLRRRR*SSPGSCTSFAEFSASSGEHSSTPSRSPQR 157
>BP044109
Length = 497
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/142 (30%), Positives = 57/142 (39%), Gaps = 7/142 (4%)
Frame = +2
Query: 446 EPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTP------IPESQPAEQ 499
+PP T S +HSS +L+S F P + N TP +S P Q
Sbjct: 32 QPPHTATTSLSHSSSTSLSSSH----FFPSPPPPPPPPNKNKTTPSHASNATSKSTPRTQ 199
Query: 500 T-TSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEP 558
T T+PP SP SS P T A + + S T+P P SS P P
Sbjct: 200 TPTTPPPSPTSSPKPPPSTFATKPSTSPPETPSSSSHGPAPTLPSPPSSSTP----TSTP 367
Query: 559 NQTEPQPRTSDHSAPRASARPA 580
+ P ++ S PRA+ PA
Sbjct: 368 SPPSPPNGSTLPSPPRATPTPA 433
>TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-like
protein, partial (41%)
Length = 522
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +2
Query: 483 HSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIP 542
HS+ P S +TTS SP S+ +PSP+ AP L PS S S + P
Sbjct: 65 HSTLTKPPSQISSNPNKTTSTTSSPTSTTPKPSPSPAPSSTL--RAPSSSPASASPASSP 238
Query: 543 -YDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINV 601
P S P P P TS+ S+P A++ ++ + +S + + +
Sbjct: 239 TKSPKPSSPSASAPPSSTPLTPSTATSE-SSPTATSSSSSASPAPPTSFSALSRALELKA 415
Query: 602 VDSSPS 607
+ SSPS
Sbjct: 416 LASSPS 433
>AW719831
Length = 436
Score = 40.0 bits (92), Expect = 0.002
Identities = 41/145 (28%), Positives = 63/145 (43%)
Frame = +1
Query: 469 LNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQ 528
+N LP+ L Q+ ++ +PIP Q +TT+ P P AP+ +
Sbjct: 4 VNNHTPLPLKILHQNPNSQKSPIPFHQ-QWRTTTTTTLPTPILAIPLLAPAPM*S----- 165
Query: 529 PSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDS 588
+ PT T P S+ P + P P+ R+S +A A + PA TT + +
Sbjct: 166 ---TPPPTMTPTTTTTPPSTNPHLLLPPPPH-----ARSSSCAATAAKSSPAPTTTTSPT 321
Query: 589 STAFTPVSFPINVVDSSPSNNSESI 613
S A TP S P SSP ++ S+
Sbjct: 322 SPA-TPRSSPSTASSSSPPSSPSSL 393
>TC7995 similar to PIR|S63686|S63686 sterol 24-C-methyltransferase -
Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (98%)
Length = 1524
Score = 38.9 bits (89), Expect = 0.004
Identities = 42/163 (25%), Positives = 63/163 (37%), Gaps = 9/163 (5%)
Frame = +3
Query: 461 PALTSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEA- 519
P+L+S +L+ A S+ N P PA+ SPP R++ P+ A
Sbjct: 153 PSLSSAPELSSPAAYTGSSAFSAPPNKRANAPPISPADP--SPPRKSRTTTTSTGPSSAA 326
Query: 520 ------PLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAP 573
P + + + PS PTS + + P I P P PR S S P
Sbjct: 327 PRRSKPPRRSPISSTPSTISSPTSTSGV-----GASPSISPLPSPGNLTATPRASTRSMP 491
Query: 574 RASARPA--ARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIR 614
+RP+ R++ D+ V P +S + S SIR
Sbjct: 492 SI*SRPSRVTRSSMWDAELVGPCVPSPPTREPTSWGSRSTSIR 620
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Frame = +1
Query: 494 SQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQP-SRSDEPT------SLLTIPYDPL 546
S P ++T+PP S + P+ P + P SRS T + LT P P
Sbjct: 220 SPPESRSTTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCPP 399
Query: 547 SSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSP 606
+ P P P++T P P T+ + T + SS +P + PI+ SSP
Sbjct: 400 PASPAA-TAPAPSKTPPNPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPIS-TPSSP 573
Query: 607 SNNSE 611
N +
Sbjct: 574 ENQEK 588
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 38.5 bits (88), Expect = 0.005
Identities = 37/127 (29%), Positives = 54/127 (42%)
Frame = +3
Query: 465 SDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNL 524
SD D L + + SS+P P P PA ++SPP +P ++ PT +P
Sbjct: 54 SDSDPWLLSSAASRSPPSSSSSPSPPPPPHAPAAASSSPP-TPSATL---PPTPSP---- 209
Query: 525 LQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTT 584
PS +P+ L T +P +S + N++ P H+AP S P TT
Sbjct: 210 ----PSPRSDPSPLSTSTTNPTTSSSTT-PKTTTNKSNPNTARLSHAAP*GSP-PLLTTT 371
Query: 585 DTDSSTA 591
S TA
Sbjct: 372 SPPSVTA 392
>TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein), partial (6%)
Length = 1003
Score = 38.5 bits (88), Expect = 0.005
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = +1
Query: 484 SSNPLTP-IPESQPAEQTTSPPHSPRSS----FFQPSPTEAPLWNLLQNQPSRSDEPTSL 538
SS+ L+P + S P+ T PP S R++ QP+P+ +L P+ P
Sbjct: 166 SSSSLSPWLSPSPPSSTTPPPPPSHRTNNNNLSTQPTPSAPSATSLASRTPASPPSP--- 336
Query: 539 LTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAART 583
P ++ P H P+ + P +S S PR+ +RP T
Sbjct: 337 ------PPTTTPPTHNPSSPSPSAPPWTSSPPSPPRSESRPQVLT 453
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 37.7 bits (86), Expect = 0.009
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Frame = +1
Query: 476 PISALLQHSSNPLTPI-PESQPAEQTT-SPPHSPRSSFFQP-SPTEAPLWNLLQNQPSRS 532
P LL SS+ + P P++Q T SP SP S+ P SPT+ + +N P+
Sbjct: 22 PCGLLLHTSSSSSSSYSPPPPPSQQPTHSPSTSPTSTTTPPPSPTK-----VTENPPTA- 183
Query: 533 DEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAF 592
P++ P S EP P P+ + Q ++P AS P+ +T ++ A
Sbjct: 184 --PSTSTKSPTSSASEEP---SPPNPSTSTTQQPKHSPTSPPASPSPSPPSTKPPTAMA- 345
Query: 593 TPVSFPINVVDSSPS 607
+P + P++ S P+
Sbjct: 346 SPSTSPLSATKSHPT 390
Score = 33.9 bits (76), Expect = 0.12
Identities = 41/156 (26%), Positives = 58/156 (36%), Gaps = 5/156 (3%)
Frame = +1
Query: 431 KPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTP 490
+PT P+ T PP T+ + + TS P S+ S P P
Sbjct: 94 QPTH-SPSTSPTSTTTPPPSPTKVTENPPTAPSTSTKS-------PTSSA---SEEPSPP 240
Query: 491 IPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLS--- 547
P + +Q P HSP S PSP+ P + PT++ + PLS
Sbjct: 241 NPSTSTTQQ---PKHSPTSPPASPSPS-----------PPSTKPPTAMASPSTSPLSATK 378
Query: 548 SEPIIHEQPEPNQTEPQPRTS--DHSAPRASARPAA 581
S P P + T P TS S+P +S +A
Sbjct: 379 SHPTPPAAPSASSTPPPTTTSLKTMSSPSSSTPSSA 486
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 37.4 bits (85), Expect = 0.011
Identities = 45/153 (29%), Positives = 61/153 (39%), Gaps = 2/153 (1%)
Frame = +2
Query: 448 PARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPP-HS 506
P + S S P TS D + S +S P P P S P+ + SPP +S
Sbjct: 359 PPPLPNPSVPSPSPKTTSRDSPPTRPSTTSSPAWSSASAPAPPPPSSSPSSASFSPPANS 538
Query: 507 PRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPR 566
P SS P P + PS S P+S TIP I P ++
Sbjct: 539 PTSSASPP-----PSARRSRRDPSASRSPSS-TTIPAS-------ISPSTAPTRSTLSST 679
Query: 567 TSDHSAPRASARPAARTTDTDS-STAFTPVSFP 598
+S +A S R +R T+S S++ TP S P
Sbjct: 680 SSRVAAALFSGRRWSRPRLTNS*SSSTTPNSSP 778
Score = 33.1 bits (74), Expect = 0.21
Identities = 47/188 (25%), Positives = 66/188 (35%), Gaps = 11/188 (5%)
Frame = +2
Query: 468 DLNLFDALPISALLQHSSNPLTPIPE-----SQPAEQTTSPPHSPRSSFFQPSPTEAPLW 522
+L LP + H S P T +P + P +PP P S PSP
Sbjct: 239 ELEFCQWLPYPSHHHHLSPPHTTMPPPTLSYAPPLPLNYAPPPLPNPSVPSPSP------ 400
Query: 523 NLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAP------RAS 576
SR PT T SS P P P ++ S P AS
Sbjct: 401 ----KTTSRDSPPTRPSTTSSPAWSSA----SAPAPPPPSSSPSSASFSPPANSPTSSAS 556
Query: 577 ARPAARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCPS 636
P+AR + D S + +P S + +S S ++ R + +V+A S
Sbjct: 557 PPPSARRSRRDPSASRSPSS---TTIPASISPSTAPTRSTLSSTSSRVAA------ALFS 709
Query: 637 PRRYPGPR 644
RR+ PR
Sbjct: 710 GRRWSRPR 733
>TC8573 similar to UP|Q9SIH5 (Q9SIH5) At2g36090 protein, partial (17%)
Length = 515
Score = 37.0 bits (84), Expect = 0.015
Identities = 27/99 (27%), Positives = 36/99 (36%)
Frame = +3
Query: 499 QTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEP 558
Q T PP SP S+ +PT P PTS + P P + P
Sbjct: 126 QQTPPPPSPPSTLISSNPTSLLASTAPL*PPPLPPPPTSAASAPKTPSGGKSAPPRGPPS 305
Query: 559 NQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSF 597
N P P + P A + P T S+T +P S+
Sbjct: 306 NNP*PTPSSPPSPPPTALSSP---TPSLPSTTLLSPTSY 413
>TC8946 homologue to GB|AAM66972.1|21617922|AY088650 pyridoxine
biosynthesis protein-like {Arabidopsis thaliana;} ,
partial (45%)
Length = 503
Score = 36.6 bits (83), Expect = 0.019
Identities = 32/134 (23%), Positives = 60/134 (43%), Gaps = 16/134 (11%)
Frame = +2
Query: 477 ISALLQHSSNPLTPIPESQPAEQ--------------TTSPPHSPRSSFFQPSPTEAPLW 522
+ + L ++ P +P P + P+ T+S P+ P S P AP W
Sbjct: 92 LESSLSTATAPQSPRPRNPPSPSKSASLRCSAAASSWTSSTPNKPASP---KKPAPAPSW 262
Query: 523 NLLQNQPSRSDEPTSLL--TIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPA 580
+ P+ + + SL T+ S++P P+ + P+P ++ S PR S++P+
Sbjct: 263 PSSVSPPTSAPKAASLA*ATLSSSRKSNKP------SPSPSWPKPASAISSKPR-SSKPS 421
Query: 581 ARTTDTDSSTAFTP 594
A T T + ++ +P
Sbjct: 422 ASITSTRARSSLSP 463
Score = 27.7 bits (60), Expect = 8.9
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 17/108 (15%)
Frame = +2
Query: 369 PAPEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKPDDGDDDDSEDGPPQKKKKKVRI 428
P P P P + A + SS S P + +KP S PP K +
Sbjct: 131 PRPRNPPSPSKSASLRCSAAASSWTSSTPNKPASPKKPAPAPSWPSSVSPPTSAPKAASL 310
Query: 429 V--------------VKPTRVEPAAEV---VRRTEPPARVTRSSAHSS 459
P+ +PA+ + R ++P A +T + A SS
Sbjct: 311 A*ATLSSSRKSNKPSPSPSWPKPASAISSKPRSSKPSASITSTRARSS 454
>TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(15%)
Length = 606
Score = 36.6 bits (83), Expect = 0.019
Identities = 45/163 (27%), Positives = 60/163 (36%), Gaps = 5/163 (3%)
Frame = -3
Query: 452 TRSSAHSSKPALTSDDDLN--LFD---ALPISALLQHSSNPLTPIPESQPAEQTTSPPHS 506
T+ + + PA+T L L D AL A L+HSS P P PA PP S
Sbjct: 454 TKPTTNYPVPAMTKRCRLTKALLDPHTALYTPACLRHSSKTPPPPP---PAPPQIPPPSS 284
Query: 507 PRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPR 566
P S PSP P S P P SS P+ + P P
Sbjct: 283 PPSPSSPPSP------------------PASAP*TPSSP*SSNSASSPPPQASPPPPTPT 158
Query: 567 TSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSPSNN 609
S ++ S+ ++D +TA T +S D+ P N
Sbjct: 157 VSR*TSTATSSSSQTNSSDQTRATA-TRLSQTRCTTDAPPPQN 32
>AW720177
Length = 505
Score = 36.6 bits (83), Expect = 0.019
Identities = 41/134 (30%), Positives = 55/134 (40%), Gaps = 3/134 (2%)
Frame = +1
Query: 475 LPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRS--SFFQPSPTEAPLWNLLQNQPSRS 532
LP S S P S + TS P SP S SF P P P+ S
Sbjct: 127 LPSSTKKSPPSKTSKPSGHSSESNSPTSKPTSPISPPSFPPPPP------------PTHS 270
Query: 533 DEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRT-SDHSAPRASARPAARTTDTDSSTA 591
S + P PLS+ P P N P P + + S P+A++ P++ STA
Sbjct: 271 ---LSTSSTPSPPLSTPP----SPSRNSATPPPTSLAXSSKPKATSTPSS-----PPSTA 414
Query: 592 FTPVSFPINVVDSS 605
+P + +VVDSS
Sbjct: 415 TSPTATYYSVVDSS 456
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,820,267
Number of Sequences: 28460
Number of extensions: 253262
Number of successful extensions: 2579
Number of sequences better than 10.0: 258
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2482
length of query: 952
length of database: 4,897,600
effective HSP length: 99
effective length of query: 853
effective length of database: 2,080,060
effective search space: 1774291180
effective search space used: 1774291180
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0012a.3