BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0010.22
(235 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP038344 76 6e-15
TC12572 similar to PIR|T46032|T46032 WD-40 repeat regulatory pro... 68 1e-12
TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subun... 65 8e-12
TC16077 similar to PIR|T00593|T02480 sec13-related protein At2g3... 63 5e-11
TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG... 62 9e-11
TC8856 similar to UP|Q8W403 (Q8W403) Sec13p, partial (48%) 62 1e-10
AV407645 59 6e-10
TC10222 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Ar... 58 2e-09
TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5,... 55 8e-09
TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snR... 55 1e-08
AV772783 55 1e-08
TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial... 54 2e-08
AV413963 54 2e-08
TC13023 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Fragm... 52 7e-08
TC16458 similar to UP|O48679 (O48679) F3I6.5 protein, partial (20%) 52 9e-08
TC10804 similar to PIR|T00593|T02480 sec13-related protein At2g3... 50 3e-07
TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-bi... 49 8e-07
TC9494 similar to PIR|T00593|T02480 sec13-related protein At2g30... 48 2e-06
BP050721 47 3e-06
TC19491 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Ar... 45 1e-05
>BP038344
Length = 525
Score = 75.9 bits (185), Expect = 6e-15
Identities = 43/153 (28%), Positives = 75/153 (48%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H V +S G LLA+AS D T IW + + L GH + ++W++
Sbjct: 95 HDAAVACVKFSNDGTLLASASLDKTLIIWSSA--TLSLLHRLTGHSEGISDLAWSSDSHY 268
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWAD 187
+ + S D+++ IW+ +CV L+GHT V V ++P + ++S S+D +++VW
Sbjct: 269 ICSASDDRTLRIWD---ATGGDCVKTLRGHTHAVFCVNFNPQSNYIVSGSFDETVRVW-- 433
Query: 188 EGDSDDWQCVQTLGQPNNGHTSTVWALSFNASG 220
+ +C+ T+ HT V ++ FN G
Sbjct: 434 --EVKTGRCIHTI----IAHTMPVTSVHFNRDG 514
Score = 61.2 bits (147), Expect = 1e-10
Identities = 36/120 (30%), Positives = 62/120 (51%)
Frame = +2
Query: 108 TLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWH 167
TL H+ V V ++ GTLLA+ S DK++ IW ++ + L GH++ + + W
Sbjct: 83 TLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLS---LLHRLTGHSEGISDLAWS 253
Query: 168 PTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
+ S S D ++++W D+ CV+TL GHT V+ ++FN + +V+ S
Sbjct: 254 SDSHYICSASDDRTLRIW----DATGGDCVKTL----RGHTHAVFCVNFNPQSNYIVSGS 409
Score = 57.4 bits (137), Expect = 2e-09
Identities = 39/123 (31%), Positives = 58/123 (46%)
Frame = +2
Query: 6 LKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLD 65
L + RL GH++ + L W+ + + S S D+T+RIW D + G C L
Sbjct: 194 LSLLHRLTGHSEGISDLAWSSDSHY------ICSASDDRTLRIW--DATGG--DCVKTL- 340
Query: 66 ETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASG 125
HT V ++P + + SFD T +WE G C+ T+ H V SV +N G
Sbjct: 341 RGHTHAVFCVNFNPQSNYIVSGSFDETVRVWEVKTG--RCIHTIIAHTMPVTSVHFNRDG 514
Query: 126 TLL 128
TL+
Sbjct: 515 TLI 523
>TC12572 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (51%)
Length = 770
Score = 68.2 bits (165), Expect = 1e-12
Identities = 53/184 (28%), Positives = 84/184 (44%), Gaps = 5/184 (2%)
Frame = +3
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L H+D V ++D+N G+ +V S S D RIW D S+G C L +
Sbjct: 27 LPAHSDPVTAVDFN----RDGSLIV--SSSYDGLCRIW--DASTG--HCMKTLIDDENPP 176
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENE---VKSVSWNASGTLL 128
V +SP+ K + + D +W G F + T GH N + S +G +
Sbjct: 177 VSFVKFSPNAKFILVGTLDNNLRLWNYSTGRF--LKTYTGHVNSKYCISSTFSTTNGKYV 350
Query: 129 ATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILIS--CSYDNSIKVWA 186
S D +++WE+Q + V L+GH+ V V HPTE+++ S D ++K+W
Sbjct: 351 VGGSEDHGIYLWELQTR---KIVQKLEGHSDTVVSVSCHPTENMIASGALGNDKTVKIWT 521
Query: 187 DEGD 190
+ D
Sbjct: 522 QQKD 533
Score = 36.2 bits (82), Expect = 0.005
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 149 ECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHT 208
+C+ VL H+ V V ++ +++S SYD ++W D+ C++TL N
Sbjct: 12 KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW----DASTGHCMKTLIDDENPPV 179
Query: 209 STVWALSFNASGDKMVTCSSNL 230
S V S NA + T +NL
Sbjct: 180 SFV-KFSPNAKFILVGTLDNNL 242
Score = 34.3 bits (77), Expect = 0.019
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQ 51
K VQ+LEGH+D V S+ +P + + DKTV+IW Q
Sbjct: 402 KIVQKLEGHSDTVVSVSCHPTE----NMIASGALGNDKTVKIWTQ 524
>TC10816 homologue to UP|CAE45585 (CAE45585) Coatomer alpha subunit-like
protein, partial (20%)
Length = 979
Score = 65.5 bits (158), Expect = 8e-12
Identities = 45/181 (24%), Positives = 84/181 (45%), Gaps = 2/181 (1%)
Frame = +1
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLD- 65
K + + E ++RV L ++P P + AS +++W+ + + ++D
Sbjct: 238 KMLTKFETKSNRVKGLSFHPKR-----PWILASLHSG-VIQLWDYRMGT-------LIDK 378
Query: 66 -ETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS 124
+ H VR + S L + D +W C+ TL GH + +++V ++
Sbjct: 379 FDEHDGPVRGVHFHHSQPLFVSGGDDYKIKVWNYKL--HRCLFTLLGHLDYIRTVQFHHE 552
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKV 184
+ + S D+++ IW Q C+SVL GH V +HP ED+++S S D +++V
Sbjct: 553 SPWIVSASDDQTIRIWNWQSRT---CISVLTGHNHYVMCALFHPREDLVVSASLDQTVRV 723
Query: 185 W 185
W
Sbjct: 724 W 726
Score = 56.6 bits (135), Expect = 4e-09
Identities = 50/195 (25%), Positives = 84/195 (42%), Gaps = 24/195 (12%)
Frame = +1
Query: 30 HAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASF 89
H PL F S D +++W L L+ LD + RTV+ SP + +AS
Sbjct: 418 HHSQPL-FVSGGDDYKIKVWNYKLHRCLFTLLGHLD--YIRTVQFHHESP---WIVSASD 579
Query: 90 DATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEM------- 142
D T IW C++ L GH + V ++ L+ + S D++V +W++
Sbjct: 580 DQTIRIWN--WQSRTCISVLTGHNHYVMCALFHPREDLVVSASLDQTVRVWDIGSLKRKN 753
Query: 143 -QPVNEFECVS----------------VLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
P ++ +S VL+GH + V +HP +++S + D +K+W
Sbjct: 754 ASPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPALPLIVSAADDRQVKLW 933
Query: 186 ADEGDSDDWQCVQTL 200
D+ W+ V TL
Sbjct: 934 R-MNDTKAWE-VDTL 972
>TC16077 similar to PIR|T00593|T02480 sec13-related protein At2g30050 -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(46%)
Length = 521
Score = 62.8 bits (151), Expect = 5e-11
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS--G 125
H TV A GK LATAS D T I + +ATL GH+ V V+W G
Sbjct: 121 HQDTVHDVAMDYYGKRLATASSDHTIKIIGVSIAASQHLATLTGHQGPVWQVAWAHPKFG 300
Query: 126 TLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE-DILISC-SYDNSIK 183
+LLA+CS D V +W+ NE+ V H V V W P E + ++C S D +I
Sbjct: 301 SLLASCSYDGRVILWKEGDQNEWTQAHVFDEHKSSVNSVAWAPHELGLCLACGSSDGNIS 480
Query: 184 VWADEGD 190
V+ D
Sbjct: 481 VFTARAD 501
Score = 52.4 bits (124), Expect = 7e-08
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +1
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKW-HPT 169
GH++ V V+ + G LAT S D ++ I + + + ++ L GH V V W HP
Sbjct: 118 GHQDTVHDVAMDYYGKRLATASSDHTIKIIGVS-IAASQHLATLTGHQGPVWQVAWAHPK 294
Query: 170 -EDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWA 213
+L SCSYD + +W EGD ++W + + S WA
Sbjct: 295 FGSLLASCSYDGRVILW-KEGDQNEWTQAHVFDEHKSSVNSVAWA 426
Score = 42.7 bits (99), Expect = 5e-05
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L GH VW + W H + ASCS D V +W++ W V DE H +
Sbjct: 244 LTGHQGPVWQVAW----AHPKFGSLLASCSYDGRVILWKEG-DQNEWTQAHVFDE-HKSS 405
Query: 72 VRSCAWSPS--GKLLATASFDATTAIW 96
V S AW+P G LA S D +++
Sbjct: 406 VNSVAWAPHELGLCLACGSSDGNISVF 486
>TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG
{Arabidopsis thaliana;} , partial (24%)
Length = 1048
Score = 62.0 bits (149), Expect = 9e-11
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +3
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATC 131
V C +S GK+LA+A D +W + +T E H++ + V + + + LAT
Sbjct: 3 VTCCHFSSDGKMLASAGDDKKVVLWNM--DTLQTESTPEQHKSVISDVRFRPNSSQLATA 176
Query: 132 SRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE-DILISCSYDNSIKVW 185
S DKSV +W+ N CV GH+ + + +HP + DI C N I+ W
Sbjct: 177 SIDKSVRLWD--AANPTYCVQEYNGHSSAIMSLDFHPKKTDIFCFCDSANEIRYW 335
Score = 55.1 bits (131), Expect = 1e-08
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Frame = +3
Query: 36 VFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAI 95
+ AS DK V +W D E H + + P+ LATAS D + +
Sbjct: 36 MLASAGDDKKVVLWNMDTLQ-----TESTPEQHKSVISDVRFRPNSSQLATASIDKSVRL 200
Query: 96 WENVGGDFECVATLEGHENEVKSVSWNASGT-LLATCSRDKSVWIWEMQPVNEFECVSVL 154
W+ + CV GH + + S+ ++ T + C + W + C V
Sbjct: 201 WDAANPTY-CVQEYNGHSSAIMSLDFHPKKTDIFCFCDSANEIRYWN---ITSSSCTRVS 368
Query: 155 QGHTQDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWAL 214
+G + V++ P ++S + D + ++ E D + TL GH V ++
Sbjct: 369 KGGS---SQVRFQPRIGQVLSAASD*VVSIFDVESDRQ----IYTL----QGHPEPVNSI 515
Query: 215 SFNASGDKMVTCSSNLL 231
++ +GD + + S NL+
Sbjct: 516 CWDVNGDFLASVSPNLV 566
Score = 51.2 bits (121), Expect = 2e-07
Identities = 45/177 (25%), Positives = 75/177 (41%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
VQ GH+ + SLD++P +F C +R W SS K +
Sbjct: 228 VQEYNGHSSAIMSLDFHPKKTD-----IFCFCDSANEIRYWNITSSSCTRVSKGGSSQVR 392
Query: 69 TRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLL 128
+ G++L+ AS D +I++ V D + + TL+GH V S+ W+ +G L
Sbjct: 393 FQP-------RIGQVLSAAS-D*VVSIFD-VESDRQ-IYTLQGHPEPVNSICWDVNGDFL 542
Query: 129 ATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
A+ S V IW + EC+ L +HP+ L+ +S+++W
Sbjct: 543 ASVS-PNLVKIWSL---TSGECIQELSSSGNQFYSCVFHPSYSTLLVIGGFSSLELW 701
>TC8856 similar to UP|Q8W403 (Q8W403) Sec13p, partial (48%)
Length = 568
Score = 61.6 bits (148), Expect = 1e-10
Identities = 45/127 (35%), Positives = 60/127 (46%), Gaps = 4/127 (3%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS--G 125
H TV A GK LATAS D T I + +ATL GH+ V V+W G
Sbjct: 145 HQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLAGHQGPVWQVAWAHPKFG 324
Query: 126 TLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE-DILISC-SYDNSIK 183
+++A+CS D V IW+ NE+ V H V V W P E + ++C S D +I
Sbjct: 325 SMIASCSYDGRVIIWKEGNQNEWIQAHVFDDHKSSVNSVVWAPHELGLCLACGSSDGNIS 504
Query: 184 VWADEGD 190
V+ D
Sbjct: 505 VFTARAD 525
Score = 49.3 bits (116), Expect = 6e-07
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKW-HPT 169
GH++ V V+ + G LAT S D ++ I + + ++ L GH V V W HP
Sbjct: 142 GHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTAS-QHLATLAGHQGPVWQVAWAHPK 318
Query: 170 -EDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWA 213
++ SCSYD + +W EG+ ++W + S VWA
Sbjct: 319 FGSMIASCSYDGRVIIW-KEGNQNEWIQAHVFDDHKSSVNSVVWA 450
Score = 40.8 bits (94), Expect = 2e-04
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L GH VW + W H + ASCS D V IW++ + W V D+ H +
Sbjct: 268 LAGHQGPVWQVAW----AHPKFGSMIASCSYDGRVIIWKEG-NQNEWIQAHVFDD-HKSS 429
Query: 72 VRSCAWSPS--GKLLATASFDATTAIW 96
V S W+P G LA S D +++
Sbjct: 430 VNSVVWAPHELGLCLACGSSDGNISVF 510
>AV407645
Length = 413
Score = 59.3 bits (142), Expect = 6e-10
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H V +S +GK LA+AS D T IWE L GH+ S+SW+ +
Sbjct: 5 HDDEVWLVQFSHNGKYLASASNDRTAIIWEVGINGLSLKHRLSGHQKAFSSISWSPNDQE 184
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWAD 187
L TC ++++ W+ V+ +C+ + + + W P+ ++S D SI +W
Sbjct: 185 LLTCGVEEAIRRWD---VSTGKCLQIYEKAGAGLISCTWFPSGKYILSGLSDKSICMWEL 355
Query: 188 EG-DSDDWQCVQTL 200
+G + + W+ +TL
Sbjct: 356 DGKEVESWKGPKTL 397
Score = 49.7 bits (117), Expect = 4e-07
Identities = 39/128 (30%), Positives = 62/128 (47%)
Frame = +2
Query: 15 HNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRS 74
H+D VW + ++ H G L AS S D+T IWE + +GL + K L H + S
Sbjct: 5 HDDEVWLVQFS----HNGKYL--ASASNDRTAIIWEVGI-NGL-SLKHRL-SGHQKAFSS 157
Query: 75 CAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRD 134
+WSP+ + L T + W+ G +C+ E + S +W SG + + D
Sbjct: 158 ISWSPNDQELLTCGVEEAIRRWDVSTG--KCLQIYEKAGAGLISCTWFPSGKYILSGLSD 331
Query: 135 KSVWIWEM 142
KS+ +WE+
Sbjct: 332 KSICMWEL 355
Score = 43.1 bits (100), Expect = 4e-05
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +2
Query: 11 RLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTR 70
RL GH S+ W+P T C ++ +R W D+S+G C + ++
Sbjct: 125 RLSGHQKAFSSISWSPNDQELLT------CGVEEAIRRW--DVSTG--KCLQIYEKAGAG 274
Query: 71 TVRSCAWSPSGKLLATASFDATTAIWENVGGDFE 104
+ SC W PSGK + + D + +WE G + E
Sbjct: 275 LI-SCTWFPSGKYILSGLSDKSICMWELDGKEVE 373
>TC10222 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;}, partial (55%)
Length = 557
Score = 57.8 bits (138), Expect = 2e-09
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +1
Query: 6 LKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLD 65
LK V+ H+D VW++ W PAT A P + + S D+TVR+W D + VL+
Sbjct: 28 LKSVEN--AHDDSVWAVTWAPAT--ANRPPLLLTGSLDETVRLWRSD--------ELVLE 171
Query: 66 ET---HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWN 122
T H V S A P G + A++S D+ +++ +ATLE +EV + ++
Sbjct: 172 RTNTGHCLGVASVAAHPLGSIAASSSLDSFVRVFDVDSN--ATLATLEAPPSEVWQMRFD 345
Query: 123 ASGTLLATC-SRDKSVWIWE 141
G LLA SV +W+
Sbjct: 346 PKGALLAVAGGGSASVKLWD 405
Score = 38.1 bits (87), Expect = 0.001
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +1
Query: 112 HENEVKSVSWNASGT----LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWH 167
H++ V +V+W + LL T S D++V +W +E GH V V H
Sbjct: 49 HDDSVWAVTWAPATANRPPLLLTGSLDETVRLWRS---DELVLERTNTGHCLGVASVAAH 219
Query: 168 PTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASG 220
P I S S D+ ++V+ D D + TL P S VW + F+ G
Sbjct: 220 PLGSIAASSSLDSFVRVF----DVDSNATLATLEAP----PSEVWQMRFDPKG 354
Score = 30.0 bits (66), Expect = 0.36
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL------- 64
LE VW + ++P L+ + G +V++W+ + W A L
Sbjct: 304 LEAPPSEVWQMRFDPKGA-----LLAVAGGGSASVKLWD----TSTWELVATLSIPRPEG 456
Query: 65 -----DETHTRT-VRSCAWSPSGKLLATASFD 90
D++ ++ V S AWSP GK +A S D
Sbjct: 457 GSKPTDKSGSKKFVLSVAWSPDGKRIACGSMD 552
>TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5, TAC
clone:K8K14 (AT5g67320/K8K14_4), partial (19%)
Length = 1089
Score = 55.5 bits (132), Expect = 8e-09
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Frame = +1
Query: 77 WSPSGK---------LLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
WSP+G +LA+ASFD+T +W+ G + + +L GH + V SV+++ +G
Sbjct: 7 WSPTGPGTSNPNKKLVLASASFDSTVKLWDVEVG--KLIYSLNGHRDGVYSVAFSPNGEY 180
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKV 184
LA+ S DKS+ IW ++ E + V G + + V W+ D + +C +N++ V
Sbjct: 181 LASGSPDKSIHIWSLK---EGKIVKTYTG-SGGIFEVCWNKEGDKIAACFANNTVCV 339
Score = 53.9 bits (128), Expect = 2e-08
Identities = 35/118 (29%), Positives = 57/118 (47%)
Frame = +1
Query: 26 PATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLA 85
P T + LV AS S D TV++W+ ++ +++ H V S A+SP+G+ LA
Sbjct: 22 PGTSNPNKKLVLASASFDSTVKLWDVEVGKLIYSLNG-----HRDGVYSVAFSPNGEYLA 186
Query: 86 TASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQ 143
+ S D + IW G + V T G + V WN G +A C + +V + + +
Sbjct: 187 SGSPDKSIHIWSLKEG--KIVKTYTG-SGGIFEVCWNKEGDKIAACFANNTVCVLDFR 351
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/109 (26%), Positives = 52/109 (47%)
Frame = +1
Query: 127 LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWA 186
+LA+ S D +V +W+ V + + L GH V V + P + L S S D SI +W+
Sbjct: 52 VLASASFDSTVKLWD---VEVGKLIYSLNGHRDGVYSVAFSPNGEYLASGSPDKSIHIWS 222
Query: 187 DEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAVM 235
+ + V+T + ++ + +N GDK+ C +N + V+
Sbjct: 223 ----LKEGKIVKTY-----TGSGGIFEVCWNKEGDKIAACFANNTVCVL 342
>TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snRNP-specific
40 kDa protein (hPrp8-binding) {Homo sapiens;} , partial
(43%)
Length = 719
Score = 54.7 bits (130), Expect = 1e-08
Identities = 29/118 (24%), Positives = 60/118 (50%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H + + ++P+G ++A+ S D +W NV G+ + L+GH+N V + W GT
Sbjct: 301 HQSVIYTMKFNPAGTVIASGSHDREIFLW-NVHGECKNFMVLKGHKNAVLDLHWTTDGTQ 477
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
+ + S DK+V +W+++ + + + + + P +++S S D + K+W
Sbjct: 478 IVSASPDKTVRVWDVETGKQVKKMVEHLSYVNSCCPSRRGP--PLVVSGSDDGTAKLW 645
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/100 (26%), Positives = 53/100 (53%)
Frame = +1
Query: 106 VATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVK 165
+ L GH++ + ++ +N +GT++A+ S D+ +++W + E + VL+GH V +
Sbjct: 283 IMLLTGHQSVIYTMKFNPAGTVIASGSHDREIFLWNVH--GECKNFMVLKGHKNAVLDLH 456
Query: 166 WHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNN 205
W ++S S D +++VW E + V+ L N+
Sbjct: 457 WTTDGTQIVSASPDKTVRVWDVETGKQVKKMVEHLSYVNS 576
Score = 43.1 bits (100), Expect = 4e-05
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +1
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
E K L+GH + V L W GT +V S S DKTVR+W D+ +G K V
Sbjct: 400 ECKNFMVLKGHKNAVLDLHWTTD----GTQIV--SASPDKTVRVW--DVETGKQVKKMV- 552
Query: 65 DETHTRTVRSCAWSPSG-KLLATASFDATTAIWE 97
H V SC S G L+ + S D T +W+
Sbjct: 553 --EHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWD 648
>AV772783
Length = 473
Score = 54.7 bits (130), Expect = 1e-08
Identities = 39/115 (33%), Positives = 52/115 (44%), Gaps = 15/115 (13%)
Frame = +3
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFE-----------CVATLEGHENE----V 116
V +CAWSP+G LLA+ S D+T IW GG + + ++G NE V
Sbjct: 141 VCACAWSPTGSLLASGSGDSTARIWTIAGGRSKPGSQDDPLNALVLKHVKGKTNEKSKDV 320
Query: 117 KSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTED 171
++ N GTLLAT S D IW + E S L H + KW+ D
Sbjct: 321 TTLDGNGEGTLLATGSYDGQARIW----TTDGELKSTLSKHKGPIFSSKWNKKGD 473
Score = 45.1 bits (105), Expect = 1e-05
Identities = 36/114 (31%), Positives = 48/114 (41%), Gaps = 12/114 (10%)
Frame = +3
Query: 24 WNPATGHAGTPLVFASCSGDKTVRIW----------EQDLSSGLWACKAVLDETH--TRT 71
W+P T + AS SGD T RIW QD K V +T+ ++
Sbjct: 156 WSP------TGSLLASGSGDSTARIWTIAGGRSKPGSQDDPLNALVLKHVKGKTNEKSKD 317
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASG 125
V + + G LLAT S+D IW D E +TL H+ + S WN G
Sbjct: 318 VTTLDGNGEGTLLATGSYDGQARIWTT---DGELKSTLSKHKGPIFSSKWNKKG 470
Score = 33.9 bits (76), Expect = 0.025
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Frame = +3
Query: 116 VKSVSWNASGTLLATCSRDKSVWIWEM-----QPVNEFECVSVL-----QGHT----QDV 161
V + +W+ +G+LLA+ S D + IW + +P ++ + ++ L +G T +DV
Sbjct: 141 VCACAWSPTGSLLASGSGDSTARIWTIAGGRSKPGSQDDPLNALVLKHVKGKTNEKSKDV 320
Query: 162 KMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGD 221
+ + +L + SYD ++W +G+ L + H +++ +N GD
Sbjct: 321 TTLDGNGEGTLLATGSYDGQARIWTTDGE---------LKSTLSKHKGPIFSSKWNKKGD 473
Score = 25.4 bits (54), Expect = 8.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 155 QGHTQDVKMVKWHPTEDILISCSYDNSIKVWADEG 189
+G Q V W PT +L S S D++ ++W G
Sbjct: 123 KGILQ*VCACAWSPTGSLLASGSGDSTARIWTIAG 227
>TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial (60%)
Length = 453
Score = 53.9 bits (128), Expect = 2e-08
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +2
Query: 83 LLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEM 142
LLA+ D +W + ATLE H + V ++ S LAT S DK+V +W++
Sbjct: 2 LLASGGHDKKAVLWYT--DSLKQKATLEEHSALITDVRFSPSMPRLATSSFDKTVKVWDV 175
Query: 143 QPVNEFECVSVLQGHTQDVKMVKWHPT-EDILISCSYDNSIKVWA 186
N + GH+ V + +HP ED++ SC D I+ W+
Sbjct: 176 D--NPGYSLRTFTGHSASVMSLDFHPNKEDLICSCDSDGEIRYWS 304
Score = 49.7 bits (117), Expect = 4e-07
Identities = 37/128 (28%), Positives = 58/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 36 VFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAI 95
+ AS DK +W D KA L+E H+ + +SPS LAT+SFD T +
Sbjct: 2 LLASGGHDKKAVLWYTDSLKQ----KATLEE-HSALITDVRFSPSMPRLATSSFDKTVKV 166
Query: 96 WENVGGDFECVATLEGHENEVKSVSWNAS-GTLLATCSRDKSVWIWEMQPVNEFECVSVL 154
W+ V + T GH V S+ ++ + L+ +C D + W +N C V
Sbjct: 167 WD-VDNPGYSLRTFTGHSASVMSLDFHPNKEDLICSCDSDGEIRYWS---INNGSCARVS 334
Query: 155 QGHTQDVK 162
+G T ++
Sbjct: 335 KGGTTKMR 358
Score = 36.2 bits (82), Expect = 0.005
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 127 LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWA 186
LLA+ DK +W + + + L+ H+ + V++ P+ L + S+D ++KVW
Sbjct: 2 LLASGGHDKKAVLWYTDSLKQ---KATLEEHSALITDVRFSPSMPRLATSSFDKTVKVW- 169
Query: 187 DEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMV-TCSSN 229
+ D+ + + GH+++V +L F+ + + ++ +C S+
Sbjct: 170 -DVDNPGYSL-----RTFTGHSASVMSLDFHPNKEDLICSCDSD 283
>AV413963
Length = 313
Score = 53.9 bits (128), Expect = 2e-08
Identities = 26/77 (33%), Positives = 45/77 (57%), Gaps = 2/77 (2%)
Frame = +2
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSV-LQGHTQDVKMVKWHPT 169
GH+ +V SV+WN GT LA+ S D++ IW ++ + + L+GHT V + W P
Sbjct: 71 GHKKKVHSVAWNCIGTKLASGSVDQTARIWHVEQHGHGKVKDIELKGHTDSVDQLCWDPK 250
Query: 170 E-DILISCSYDNSIKVW 185
D++ + S D ++++W
Sbjct: 251 HADLIATASGDKTVRLW 301
Score = 46.6 bits (109), Expect = 4e-06
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIW--ENVGGDFECVATLEGHENEVKSVSWNAS- 124
H + V S AW+ G LA+ S D T IW E G L+GH + V + W+
Sbjct: 74 HKKKVHSVAWNCIGTKLASGSVDQTARIWHVEQHGHGKVKDIELKGHTDSVDQLCWDPKH 253
Query: 125 GTLLATCSRDKSVWIWE 141
L+AT S DK+V +W+
Sbjct: 254 ADLIATASGDKTVRLWD 304
Score = 37.4 bits (85), Expect = 0.002
Identities = 20/46 (43%), Positives = 31/46 (66%)
Frame = +2
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWE 50
++K+++ L+GH D V L W+P HA + A+ SGDKTVR+W+
Sbjct: 185 KVKDIE-LKGHTDSVDQLCWDPK--HAD---LIATASGDKTVRLWD 304
>TC13023 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Fragment),
partial (18%)
Length = 591
Score = 52.4 bits (124), Expect = 7e-08
Identities = 36/132 (27%), Positives = 65/132 (48%)
Frame = +1
Query: 37 FASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIW 96
F +C+ ++++I + S + ++ L + + +V + A SP LL ++ +W
Sbjct: 202 FIACACGESIKI----VDSANASIRSTL-QGDSESVTALALSPDDNLLFSSGHSRQIRVW 366
Query: 97 ENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQG 156
+ +CV + +GHE V +S + SG LLAT D+ V +W+ V+ C +G
Sbjct: 367 DL--STLKCVRSWKGHEGPVMCMSCHPSGGLLATGGADRKVLVWD---VDGGYCTHFFKG 531
Query: 157 HTQDVKMVKWHP 168
H V V +HP
Sbjct: 532 HGGVVSCVMFHP 567
Score = 42.0 bits (97), Expect = 9e-05
Identities = 26/118 (22%), Positives = 50/118 (42%)
Frame = +1
Query: 107 ATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKW 166
+TL+G V +++ + LL + + + +W++ + +CV +GH V +
Sbjct: 265 STLQGDSESVTALALSPDDNLLFSSGHSRQIRVWDLSTL---KCVRSWKGHEGPVMCMSC 435
Query: 167 HPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMV 224
HP+ +L + D + VW D D C GH V + F+ +K +
Sbjct: 436 HPSGGLLATGGADRKVLVW----DVDGGYCTHFF----KGHGGVVSCVMFHPDPEKQL 585
>TC16458 similar to UP|O48679 (O48679) F3I6.5 protein, partial (20%)
Length = 539
Score = 52.0 bits (123), Expect = 9e-08
Identities = 31/101 (30%), Positives = 47/101 (45%), Gaps = 4/101 (3%)
Frame = +3
Query: 66 ETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGD----FECVATLEGHENEVKSVSW 121
E H V + A + G +L + + D + +WE GGD V L GH + +
Sbjct: 48 EKHKSAVNALALNEDGSVLYSGACDRSILVWERDGGDGGGEMVVVGALRGHTKAILCLV- 224
Query: 122 NASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVK 162
G L+ + S D SV +W + CV+VL+GH + VK
Sbjct: 225 -VVGDLVFSGSADNSVRVWRRGVGKSYACVAVLEGHRRPVK 344
Score = 50.1 bits (118), Expect = 3e-07
Identities = 35/117 (29%), Positives = 59/117 (49%), Gaps = 3/117 (2%)
Frame = +3
Query: 108 TLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVN---EFECVSVLQGHTQDVKMV 164
TLE H++ V +++ N G++L + + D+S+ +WE + E V L+GHT+ + +
Sbjct: 42 TLEKHKSAVNALALNEDGSVLYSGACDRSILVWERDGGDGGGEMVVVGALRGHTKAILCL 221
Query: 165 KWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGD 221
D++ S S DNS++VW G + CV L GH V L+ + D
Sbjct: 222 V--VVGDLVFSGSADNSVRVWR-RGVGKSYACVAVL----EGHRRPVKCLAVAVAVD 371
Score = 41.6 bits (96), Expect = 1e-04
Identities = 33/114 (28%), Positives = 52/114 (44%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAV-LDET 67
++ LE H V +L A G+ L +C D+++ +WE+D G V
Sbjct: 36 LETLEKHKSAVNAL----ALNEDGSVLYSGAC--DRSILVWERDGGDGGGEMVVVGALRG 197
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWEN-VGGDFECVATLEGHENEVKSVS 120
HT+ + G L+ + S D + +W VG + CVA LEGH VK ++
Sbjct: 198 HTKAILCLV--VVGDLVFSGSADNSVRVWRRGVGKSYACVAVLEGHRRPVKCLA 353
>TC10804 similar to PIR|T00593|T02480 sec13-related protein At2g30050 -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(42%)
Length = 657
Score = 50.4 bits (119), Expect = 3e-07
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +1
Query: 40 CSG--DKTVRIWEQDLSSGLWA--CKAVLDETHTRTVRSCAWSPSGKL----LATASFDA 91
CSG D TV++W+ L+ GLW C L + HT VR AW+P L +A+AS D
Sbjct: 13 CSGGCDNTVKVWK--LNHGLWKMDCFPAL-QMHTDWVRDVAWAPHLGLPKSTIASASQDG 183
Query: 92 TTAIWENVG-GDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFEC 150
IW GD L + V SW+ +G +LA + +V +W+ +++
Sbjct: 184 KVIIWTVAQEGDQWEGRVLNDFKTPVWRASWSLTGNILAVADGNNNVTLWKEAVDGDWQQ 363
Query: 151 VSVLQ 155
V+ ++
Sbjct: 364 VTTVE 378
Score = 43.9 bits (102), Expect = 2e-05
Identities = 25/101 (24%), Positives = 46/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 134 DKSVWIWEMQP-VNEFECVSVLQGHTQDVKMVKWHP----TEDILISCSYDNSIKVWADE 188
D +V +W++ + + +C LQ HT V+ V W P + + S S D + +W
Sbjct: 28 DNTVKVWKLNHGLWKMDCFPALQMHTDWVRDVAWAPHLGLPKSTIASASQDGKVIIWTVA 207
Query: 189 GDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSN 229
+ D W+ G+ N + VW S++ +G+ + N
Sbjct: 208 QEGDQWE-----GRVLNDFKTPVWRASWSLTGNILAVADGN 315
>TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1379
Score = 48.9 bits (115), Expect = 8e-07
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Frame = +3
Query: 39 SCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWEN 98
S S D +R+W DL++G A + V HT+ V S A+S + + +AS D T +W
Sbjct: 309 SGSWDGELRLW--DLAAGTSARRFV---GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT 473
Query: 99 VGGDFECVATL---EGHENEVKSVSWNAS--GTLLATCSRDKSVWIWEMQPVNEFECVSV 153
+G EC T+ + H + V V ++ S + + S D++V +W + + +
Sbjct: 474 LG---ECKYTIQDNDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNL---TNCKLRNT 635
Query: 154 LQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
L GH+ V V P + S D I +W
Sbjct: 636 LAGHSGYVNTVAVSPDGSLCASGGKDGVILLW 731
Score = 44.3 bits (103), Expect = 2e-05
Identities = 29/108 (26%), Positives = 52/108 (47%), Gaps = 4/108 (3%)
Frame = +3
Query: 39 SCSGDKTVRIWEQDLSSGLWACKAVL--DETHTRTVRSCAWSPSG--KLLATASFDATTA 94
S S D+T+++W L CK + ++ H+ V +SPS + +AS+D T
Sbjct: 435 SASRDRTIKLWNT-----LGECKYTIQDNDAHSDWVSCVRFSPSTLQPTIVSASWDRTVK 599
Query: 95 IWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEM 142
+W TL GH V +V+ + G+L A+ +D + +W++
Sbjct: 600 VWNLTNCKLR--NTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDL 737
Score = 43.5 bits (101), Expect = 3e-05
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Frame = +3
Query: 68 HTRTVRSCAWS-PSGKLLATASFDATTAIWENVGGDFECVAT---LEGHENEVKSVSWNA 123
HT V + A + ++ TAS D + +W D L GH + V+ V ++
Sbjct: 111 HTDQVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSS 290
Query: 124 SGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIK 183
G + S D + +W++ GHT+DV V + ++S S D +IK
Sbjct: 291 DGQFALSGSWDGELRLWDLAAGTS---ARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIK 461
Query: 184 VWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNAS 219
+W G +C T+ Q N+ H+ V + F+ S
Sbjct: 462 LWNTLG-----ECKYTI-QDNDAHSDWVSCVRFSPS 551
Score = 38.9 bits (89), Expect = 8e-04
Identities = 48/205 (23%), Positives = 78/205 (37%), Gaps = 27/205 (13%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDET- 67
+Q + H+D V + ++P+T S S D+TV++W L CK L T
Sbjct: 495 IQDNDAHSDWVSCVRFSPSTLQP----TIVSASWDRTVKVWN------LTNCK--LRNTL 638
Query: 68 --HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASG 125
H+ V + A SP G L A+ D +W+ G + S +A
Sbjct: 639 AGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--------------RLYSLDAGS 776
Query: 126 TLLATC----------SRDKSVWIWEMQPVNEFECVSV---------LQGHTQDVKMV-- 164
+ A C + + S+ IW+++ + E + V G+T K++
Sbjct: 777 IIHALCFSPNRYWLCAATETSIKIWDLESKSIVEDLKVDLKTEADATTGGNTNKKKVIYC 956
Query: 165 ---KWHPTEDILISCSYDNSIKVWA 186
W L S D I+VWA
Sbjct: 957 TSLNWSADGSTLFSGYTDGVIRVWA 1031
>TC9494 similar to PIR|T00593|T02480 sec13-related protein At2g30050 -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(40%)
Length = 627
Score = 47.8 bits (112), Expect = 2e-06
Identities = 39/120 (32%), Positives = 58/120 (47%), Gaps = 8/120 (6%)
Frame = +3
Query: 43 DKTVRIWEQDLSSGLWA--CKAVLDETHTRTVRSCAWSPSGKL----LATASFDATTAIW 96
D TV++W+ L+ G W C L HT VR AW+P L +A+AS D IW
Sbjct: 9 DNTVKVWK--LTHGNWKMDCFPAL-HMHTDWVRDVAWAPDLGLPKSTIASASQDGKVIIW 179
Query: 97 ENVG--GDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVL 154
VG GD L + V VSW+ +G +LA + +V +W+ E++ V+ +
Sbjct: 180 -TVGKEGDQWEGKILNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTV 356
Score = 43.9 bits (102), Expect = 2e-05
Identities = 25/101 (24%), Positives = 46/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 134 DKSVWIWEMQPVN-EFECVSVLQGHTQDVKMVKWHP----TEDILISCSYDNSIKVWADE 188
D +V +W++ N + +C L HT V+ V W P + + S S D + +W
Sbjct: 9 DNTVKVWKLTHGNWKMDCFPALHMHTDWVRDVAWAPDLGLPKSTIASASQDGKVIIWTVG 188
Query: 189 GDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSN 229
+ D W+ G+ N + VW +S++ +G+ + N
Sbjct: 189 KEGDQWE-----GKILNDFKTPVWRVSWSLTGNILAVADGN 296
>BP050721
Length = 562
Score = 47.0 bits (110), Expect = 3e-06
Identities = 30/124 (24%), Positives = 56/124 (44%), Gaps = 2/124 (1%)
Frame = -1
Query: 64 LDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNA 123
+ + + V + S G + D+T + + G E + +GH N+ +
Sbjct: 526 ISDNFGQPVNCISMSNDGNCILAGCLDSTVRLLDRTSG--ELLQEYKGHTNKSYKLDCCL 353
Query: 124 SGT--LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNS 181
+ T +A S D ++ W++ + VS + HT V V +HP E+ ++S S D +
Sbjct: 352 TNTDAHVAGGSEDGFIYFWDLV---DAYVVSSFRAHTSVVTSVSYHPKENCMLSASVDGT 182
Query: 182 IKVW 185
I+VW
Sbjct: 181 IRVW 170
Score = 28.5 bits (62), Expect = 1.1
Identities = 22/97 (22%), Positives = 42/97 (42%)
Frame = -1
Query: 1 MERLELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWAC 60
++R + +Q +GH ++ + LD T A S D + W+ + + +
Sbjct: 430 LDRTSGELLQEYKGHTNKSYKLD----CCLTNTDAHVAGGSEDGFIYFWDLVDAYVVSSF 263
Query: 61 KAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWE 97
+A HT V S ++ P + +AS D T +W+
Sbjct: 262 RA-----HTSVVTSVSYHPKENCMLSASVDGTIRVWK 167
>TC19491 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;}, partial (39%)
Length = 527
Score = 44.7 bits (104), Expect = 1e-05
Identities = 40/127 (31%), Positives = 59/127 (45%), Gaps = 7/127 (5%)
Frame = +1
Query: 66 ETHTRTVRSCAWSP-SGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS 124
E H VRS +SP +LL TAS D +++ G V T+ GH + V V +
Sbjct: 7 EGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKAL--VGTMSGHASWVLCVDVSPD 180
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPT--EDI----LISCSY 178
G +AT S D++V +W++ V + HT V V + P D+ L S S
Sbjct: 181 GGAIATGSSDRTVRLWDLA---MRASVQTMSNHTDQVWGVAFRPPGGTDVRGGRLASVSD 351
Query: 179 DNSIKVW 185
D SI ++
Sbjct: 352 DKSISLY 372
Score = 36.2 bits (82), Expect = 0.005
Identities = 31/113 (27%), Positives = 51/113 (44%), Gaps = 1/113 (0%)
Frame = +1
Query: 109 LEGHENEVKSVSWNA-SGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWH 167
LEGH V+S+ ++ LL T S D +V +++ + V + GH V V
Sbjct: 4 LEGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGK---ALVGTMSGHASWVLCVDVS 174
Query: 168 PTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASG 220
P + + S D ++++W D VQT+ + HT VW ++F G
Sbjct: 175 PDGGAIATGSSDRTVRLW----DLAMRASVQTM----SNHTDQVWGVAFRPPG 309
Score = 28.9 bits (63), Expect = 0.81
Identities = 13/42 (30%), Positives = 22/42 (51%)
Frame = +1
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWE 50
VQ + H D+VW + + P G AS S DK++ +++
Sbjct: 250 VQTMSNHTDQVWGVAFRPPGGTDVRGGRLASVSDDKSISLYD 375
Score = 28.1 bits (61), Expect = 1.4
Identities = 24/95 (25%), Positives = 41/95 (42%), Gaps = 6/95 (6%)
Frame = +1
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
V + GH V +D +P G A+ S D+TVR+W+ + + + H
Sbjct: 124 VGTMSGHASWVLCVDVSPDGG------AIATGSSDRTVRLWDLAMRASVQTM-----SNH 270
Query: 69 TRTVRSCAWSPSGKL------LATASFDATTAIWE 97
T V A+ P G LA+ S D + ++++
Sbjct: 271 TDQVWGVAFRPPGGTDVRGGRLASVSDDKSISLYD 375
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.129 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,534,624
Number of Sequences: 28460
Number of extensions: 93125
Number of successful extensions: 662
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of query: 235
length of database: 4,897,600
effective HSP length: 87
effective length of query: 148
effective length of database: 2,421,580
effective search space: 358393840
effective search space used: 358393840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0010.22