TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0002.6
         (260 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP033515                                                              198  7e-52
TC8520 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucros...   181  1e-46
TC9457 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucros...   176  3e-45
TC18881 similar to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucrose...   173  3e-44
TC17948 similar to UP|Q9FZ13 (Q9FZ13) Tuber-specific and sucrose...   162  4e-41
NP675423 transcription factor MYB101 [Lotus japonicus]                109  5e-25
NP675421 transcription factor MYB103 [Lotus japonicus]                107  2e-24
AV421932                                                              107  2e-24
AV408163                                                              106  4e-24
AV766688                                                              105  8e-24
TC10416 weakly similar to UP|O04108 (O04108) MYB factor, partial...   104  2e-23
TC19713 homologue to UP|P93474 (P93474) Myb26, partial (55%)          102  7e-23
TC20215 similar to AAS10104 (AAS10104) MYB transcription factor,...   102  7e-23
TC11120 UP|Q84PP4 (Q84PP4) Transcription factor MYB102, complete       62  4e-21
CN824947                                                               95  1e-20
AV413379                                                               93  5e-20
CB828471                                                               80  5e-16
AV417320                                                               79  6e-16
BI420780                                                               68  1e-12
AV776018                                                               55  1e-08

>BP033515 
          Length = 464

 Score =  198 bits (504), Expect = 7e-52
 Identities = 99/99 (100%), Positives = 99/99 (100%)
 Frame = -2

Query: 162 LMDQGYPFKRHCVEKDDEESRDGVEEAETMTEEEVLASSVPTSLSLFPMGEKKMVAVAEK 221
           LMDQGYPFKRHCVEKDDEESRDGVEEAETMTEEEVLASSVPTSLSLFPMGEKKMVAVAEK
Sbjct: 463 LMDQGYPFKRHCVEKDDEESRDGVEEAETMTEEEVLASSVPTSLSLFPMGEKKMVAVAEK 284

Query: 222 EEKKMDMQEGLMRTMMQRMIAEEVRAYFDKMRFDPRLQK 260
           EEKKMDMQEGLMRTMMQRMIAEEVRAYFDKMRFDPRLQK
Sbjct: 283 EEKKMDMQEGLMRTMMQRMIAEEVRAYFDKMRFDPRLQK 167


>TC8520 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and
           sucrose-responsive element binding factor, partial (36%)
          Length = 1778

 Score =  181 bits (459), Expect = 1e-46
 Identities = 81/106 (76%), Positives = 91/106 (85%)
 Frame = +1

Query: 15  DRDRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRP 74
           + DR+KG WSP+EDE L KLV +HGPRNWS+IS  IPGRSGKSCRLRWCNQLSP V+HR 
Sbjct: 169 EMDRIKGPWSPEEDEALQKLVERHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRA 348

Query: 75  FTPTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
           FTP ED  II+AHA  GNKWATI+RLL GRTDNAIKNHWNSTL+R+
Sbjct: 349 FTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 486


>TC9457 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and
           sucrose-responsive element binding factor, partial (43%)
          Length = 860

 Score =  176 bits (447), Expect = 3e-45
 Identities = 79/104 (75%), Positives = 89/104 (84%)
 Frame = +3

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRPFT 76
           DR+KG WSP+EDE L +LV +HGPRNWS+IS  IPGRSGKSCRLRWCNQLSP V+HR FT
Sbjct: 69  DRIKGPWSPEEDEALQRLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFT 248

Query: 77  PTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
             ED  II+AHA  GNKWATI+RLL GRTDNAIKNHWNSTL+R+
Sbjct: 249 AEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 380


>TC18881 similar to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucrose-responsive
           element binding factor, partial (28%)
          Length = 346

 Score =  173 bits (438), Expect = 3e-44
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = +1

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRPFT 76
           DRVKG WSP+EDE L +LV  HGP+NW+ IS  IPGRSGKSCRLRWCNQLSP+V+HRPFT
Sbjct: 46  DRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 225

Query: 77  PTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNST 116
           P ED+ II+AHA  GNKWATI+R+L GRTDNA+KNHWNST
Sbjct: 226 PEEDSTIIRAHARCGNKWATIARILNGRTDNAVKNHWNST 345


>TC17948 similar to UP|Q9FZ13 (Q9FZ13) Tuber-specific and sucrose-responsive
           element binding factor, partial (50%)
          Length = 487

 Score =  162 bits (411), Expect = 4e-41
 Identities = 73/104 (70%), Positives = 85/104 (81%)
 Frame = +2

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRPFT 76
           +R+KG WS +ED  L +LV +HG RNWS+IS  I GRSGKSCRLRWCNQLSP V+HRPF+
Sbjct: 161 ERIKGPWSAEEDRILTRLVERHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFS 340

Query: 77  PTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
             ED  II AHA  GN+WA I+RLLPGRTDNA+KNHWNSTL+RR
Sbjct: 341 VQEDETIIAAHARFGNRWAAIARLLPGRTDNAVKNHWNSTLKRR 472


>NP675423 transcription factor MYB101 [Lotus japonicus]
          Length = 1047

 Score =  109 bits (272), Expect = 5e-25
 Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +1

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG W+P+ED  L+  + +HG  +W  +   AG+  R GKSCRLRW N L PD++   FT 
Sbjct: 40  KGPWTPEEDAILVDYIQKHGHGSWRALPKLAGL-NRCGKSCRLRWTNYLRPDIKRGKFTE 216

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            E+ +II  HAV GNKW+ I+  LPGRTDN IKN WN+ L+++
Sbjct: 217 EEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKK 345


>NP675421 transcription factor MYB103 [Lotus japonicus]
          Length = 924

 Score =  107 bits (267), Expect = 2e-24
 Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +1

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG WS +ED+ L+  + +HG  +W  +   AG+  R GKSCRLRW N L PD++   F+ 
Sbjct: 40  KGPWSQEEDKVLVDYIQKHGHGSWRALPQLAGL-NRCGKSCRLRWTNYLRPDIKRGKFSD 216

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            E+ +II  HA  GNKWATI+  LPGRTDN IKN WN+ L+++
Sbjct: 217 EEEQLIINLHASLGNKWATIASHLPGRTDNEIKNLWNTHLKKK 345


>AV421932 
          Length = 402

 Score =  107 bits (267), Expect = 2e-24
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
 Frame = +3

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           +G WSP+EDE L++ +  HG   WS +   AG+  R GKSCRLRW N L PD++   FTP
Sbjct: 117 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQ-RCGKSCRLRWINYLRPDIRRGRFTP 293

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHW 113
            E+ +II  H V GN+WA I+  LPGRTDN IKN+W
Sbjct: 294 EEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYW 401


>AV408163 
          Length = 425

 Score =  106 bits (265), Expect = 4e-24
 Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
 Frame = +2

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG+W+ +ED+ L+  +  HG   W  +  +AG+  R GKSCRLRW N L PD++   FT 
Sbjct: 116 KGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLL-RCGKSCRLRWINYLRPDLKRGNFTE 292

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            ED +II+ H++ GNKW+ I+  LPGRTDN IKN+WN+ +RR+
Sbjct: 293 EEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRK 421


>AV766688 
          Length = 608

 Score =  105 bits (262), Expect = 8e-24
 Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +2

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG+W+ +ED  L+  V ++G  NW  +   AG+  R GKSCRLRW N L PD++   FT 
Sbjct: 116 KGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGL-ARCGKSCRLRWLNYLRPDIKRGHFTQ 292

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            E+ III+ H   GN+W+ I+  LPGRTDN +KNHW+++L+RR
Sbjct: 293 EEEEIIIRMHKNLGNRWSIIAAELPGRTDNEVKNHWHTSLKRR 421



 Score = 34.7 bits (78), Expect = 0.017
 Identities = 17/55 (30%), Positives = 31/55 (55%)
 Frame = +2

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQ 71
           D  +G ++ +E+E ++++    G R WS+I+A +PGR+    +  W   L   VQ
Sbjct: 266 DIKRGHFTQEEEEIIIRMHKNLGNR-WSIIAAELPGRTDNEVKNHWHTSLKRRVQ 427


>TC10416 weakly similar to UP|O04108 (O04108) MYB factor, partial (41%)
          Length = 1046

 Score =  104 bits (259), Expect = 2e-23
 Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = +2

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG+W+ +ED+ L+  V ++G  NW  +   AG+  R GKSCRLRW N L P+++   FT 
Sbjct: 131 KGTWTAEEDKKLIAYVTRYGCWNWRQLPKFAGL-ARCGKSCRLRWLNYLRPNIKRGNFTQ 307

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRR 119
            E+ III+ H   GN+W+TI+  LPGRTD+ +KNHW++TL+R
Sbjct: 308 EEEEIIIRMHKKLGNRWSTIAAELPGRTDSEVKNHWHTTLKR 433



 Score = 35.4 bits (80), Expect = 0.010
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +2

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRPFTPTE 79
           +G+++ +E+E ++++  + G R WS I+A +PGR+    +  W   L   V  +     E
Sbjct: 290 RGNFTQEEEEIIIRMHKKLGNR-WSTIAAELPGRTDSEVKNHWHTTLKRTVHEQNTVTNE 466

Query: 80  DT 81
           +T
Sbjct: 467 ET 472


>TC19713 homologue to UP|P93474 (P93474) Myb26, partial (55%)
          Length = 532

 Score =  102 bits (254), Expect = 7e-23
 Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
 Frame = +3

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG W+ +ED  L+  +  HG   W+ +  SAG+  R+GKSCRLRW N L PDV+    TP
Sbjct: 111 KGPWTIEEDLILINYIANHGEGVWNTLAKSAGLK-RTGKSCRLRWLNYLRPDVRRGNITP 287

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRR--RRGESL 125
            E  +I++ HA  GN+W+ I++ LPGRTDN IKN W + +++  ++ ESL
Sbjct: 288 EEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAESL 437


>TC20215 similar to AAS10104 (AAS10104) MYB transcription factor, partial
           (35%)
          Length = 464

 Score =  102 bits (254), Expect = 7e-23
 Identities = 50/103 (48%), Positives = 68/103 (65%), Gaps = 2/103 (1%)
 Frame = +2

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           +G WS +ED+ L   + Q+G  +W  +  +AG+  R GKSCRLRW N L  DV+    T 
Sbjct: 68  RGRWSEEEDKILTDFIKQNGEGSWKSLPKNAGLL-RCGKSCRLRWINYLREDVKRGNITS 244

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            E+ II++ HA  GN+W+ I+  LPGRTDN IKN+WNS LRR+
Sbjct: 245 EEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRK 373



 Score = 32.7 bits (73), Expect = 0.064
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +2

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQL 66
           D  +G+ + +E+E ++KL    G R WSVI+  +PGR+    +  W + L
Sbjct: 218 DVKRGNITSEEEEIIVKLHAALGNR-WSVIAGHLPGRTDNEIKNYWNSHL 364


>TC11120 UP|Q84PP4 (Q84PP4) Transcription factor MYB102, complete
          Length = 1281

 Score = 62.0 bits (149), Expect(2) = 4e-21
 Identities = 28/62 (45%), Positives = 41/62 (65%), Gaps = 2/62 (3%)
 Frame = +1

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG W+P+ED+ L++ + +HG  +W  +   AG+  R GKSCRLRW N L PD++   F+P
Sbjct: 106 KGPWTPEEDQKLVEHIQKHGHGSWRALPKLAGL-NRCGKSCRLRWTNYLRPDIKRGKFSP 282

Query: 78  TE 79
            E
Sbjct: 283 EE 288



 Score = 55.1 bits (131), Expect(2) = 4e-21
 Identities = 22/46 (47%), Positives = 33/46 (70%)
 Frame = +2

Query: 75  FTPTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
           F   ++  I+  H++ GNKW+TI+  LPGRTDN IKN WN+ L+++
Sbjct: 275 FLQKKEQTILHLHSILGNKWSTIATHLPGRTDNEIKNFWNTHLKKK 412



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/57 (24%), Positives = 28/57 (48%)
 Frame = +2

Query: 21  GSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           G++  ++++T++ L    G + WS I+  +PGR+    +  W   L   +    F P
Sbjct: 269 GNFLQKKEQTILHLHSILGNK-WSTIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDP 436


>CN824947 
          Length = 738

 Score = 95.1 bits (235), Expect = 1e-20
 Identities = 45/103 (43%), Positives = 67/103 (64%), Gaps = 2/103 (1%)
 Frame = +1

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           +G W+ +EDE L K +   G  +W  +  +AG+  R GKSCRLRW N L  D++    + 
Sbjct: 190 RGRWTAEEDELLTKYIQASGEGSWRSLPKNAGLL-RCGKSCRLRWINYLRGDLKRGNISD 366

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
            E+++I++ HA  GN+W+ I+  +PGRTDN IKN+WNS L R+
Sbjct: 367 EEESLIVKLHASFGNRWSLIASHMPGRTDNEIKNYWNSHLSRK 495


>AV413379 
          Length = 416

 Score = 92.8 bits (229), Expect = 5e-20
 Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVI--SAGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG+W+ +ED+ L+  +  HG   W  +  SAG+  R GKSCRLRW N L PD++   FTP
Sbjct: 141 KGAWTKEEDDRLIAYIRAHGEGCWRSLPKSAGLL-RCGKSCRLRWINYLRPDLKRGNFTP 317

Query: 78  TEDTIIIQAHAVHGNKWATISRLLPGRTDNAIK 110
            ED +II+ H++ GNKW+ I+  L GRTDN IK
Sbjct: 318 QEDELIIKLHSLLGNKWSLIAGRLAGRTDNEIK 416



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRS 54
           D  +G+++PQEDE ++KL    G   WS+I+  + GR+
Sbjct: 291 DLKRGNFTPQEDELIIKLHSLLG-NKWSLIAGRLAGRT 401


>CB828471 
          Length = 525

 Score = 79.7 bits (195), Expect = 5e-16
 Identities = 35/68 (51%), Positives = 47/68 (68%)
 Frame = +1

Query: 53  RSGKSCRLRWCNQLSPDVQHRPFTPTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNH 112
           R GKSCRLRW N L PD++   F+  E+  II  H + GN+W+ I+  LPGRTDN IKN 
Sbjct: 22  RCGKSCRLRWANYLRPDIKRGNFSREEEDEIINLHELLGNRWSAIAARLPGRTDNEIKNV 201

Query: 113 WNSTLRRR 120
           W++ L++R
Sbjct: 202 WHTHLKKR 225



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/55 (30%), Positives = 30/55 (53%)
 Frame = +1

Query: 17  DRVKGSWSPQEDETLMKLVGQHGPRNWSVISAGIPGRSGKSCRLRWCNQLSPDVQ 71
           D  +G++S +E++ ++ L    G R WS I+A +PGR+    +  W   L   +Q
Sbjct: 70  DIKRGNFSREEEDEIINLHELLGNR-WSAIAARLPGRTDNEIKNVWHTHLKKRLQ 231


>AV417320 
          Length = 369

 Score = 79.3 bits (194), Expect = 6e-16
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = +3

Query: 20  KGSWSPQEDETLMKLVGQHGPRNWSVIS--AGIPGRSGKSCRLRWCNQLSPDVQHRPFTP 77
           KG W+ +ED+ L+  + +HG  NW  +   AG+  R GKSCRLRW N L PD++   FT 
Sbjct: 117 KGPWTSEEDQILISYIQKHGHGNWRALPKHAGLL-RCGKSCRLRWINYLRPDIKRGNFTA 293

Query: 78  TEDTIIIQAHAVHGNKWATISRLLP 102
            E+ +II+ H + GN+W+ I+  LP
Sbjct: 294 EEEELIIKMHELLGNRWSAIAAKLP 368


>BI420780 
          Length = 475

 Score = 68.2 bits (165), Expect = 1e-12
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = +1

Query: 23  WSPQEDETLMKLVGQHGPRNWSVISAGIP---GRSGKSCRLRWCNQLSPDVQHRPFTPTE 79
           WS +ED  L   V Q+GPR W+++S  +     R  KSC  RW N L P ++    T  E
Sbjct: 211 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 390

Query: 80  DTIIIQAHAVHGNKWATISRLLPGRT 105
             ++I   A +GNKW  I+  +PGRT
Sbjct: 391 QRLVILLQANYGNKWKKIAAEVPGRT 468


>AV776018 
          Length = 476

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +1

Query: 75  FTPTEDTIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRR 120
           F   ED +II+ HAV GN+W+  +   PGRTDN IKN WNS L+++
Sbjct: 13  FHKEEDNLIIELHAVLGNRWSQDATQWPGRTDNEIKNLWNSCLKKK 150


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.315    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,724,726
Number of Sequences: 28460
Number of extensions: 90236
Number of successful extensions: 2903
Number of sequences better than 10.0: 272
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of query: 260
length of database: 4,897,600
effective HSP length: 88
effective length of query: 172
effective length of database: 2,393,120
effective search space: 411616640
effective search space used: 411616640
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.4 bits)