BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0593a.4
(944 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 52 9e-07
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 52 1e-06
TC228913 weakly similar to UP|Q8IP68 (Q8IP68) CG31813-PA, partia... 49 1e-05
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 47 3e-05
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 47 4e-05
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 46 7e-05
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr... 45 1e-04
TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall pr... 44 3e-04
NP005385 DNA-directed RNA polymerase 44 4e-04
TC206203 UP|Q99366 (Q99366) DNA-directed RNA polymerase (Fragme... 43 6e-04
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 43 6e-04
TC209975 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (9%) 42 0.001
TC224734 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich gly... 42 0.001
TC209595 homologue to GB|AAL62011.1|18252261|AY072620 AT5g08330/... 42 0.001
TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), parti... 42 0.001
TC206202 UP|Q99367 (Q99367) DNA-directed RNA polymerase (Fragme... 42 0.001
AW348715 42 0.002
TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase ... 42 0.002
TC226995 similar to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehyd... 42 0.002
TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {A... 42 0.002
>TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (6%)
Length = 1017
Score = 52.4 bits (124), Expect = 9e-07
Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 5/257 (1%)
Frame = +3
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEP--I 554
S A T P +SP ++ SPS + PT + PT+ P +S+P I
Sbjct: 39 SNAQAPATAPANSPPTTPAATSPSSGTPLAVTLPPTVVASPPTTSTP----PTTSQPPAI 206
Query: 555 IHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSE 614
+ +P P T P P+ + S+P+A +P S TP S P I PP +T
Sbjct: 207 VAPKPAP-VTPPAPKVAPASSPKAPPPQTPQPQPPKVSPVVTPTSPP--PIPPPPVSTPP 377
Query: 615 NMRKFMEVRKEKVSALEEHYLTCPSPRR---YPGPRPERLVDPDEPILANPIQEADPLVQ 671
+ K++ P+P + P P P + P+ P P+V+
Sbjct: 378 ------PLPPPKIAPTPAKTPPAPAPAKATPAPAPAPTKPAPTPAPVPPPPTLAPTPVVE 539
Query: 672 QEPIQPEPEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNH 731
P P P + R P + P AP P +E+ ++
Sbjct: 540 ----VPAPAPSSHKHRRHRHRHRRHQAPAPAPTIVRKSPPAP------PDSTAESDTTPA 689
Query: 732 PTSPESNLSIIPYTHRQ 748
P SP NL+ H+Q
Sbjct: 690 P-SPSLNLNAASSNHQQ 737
Score = 34.3 bits (77), Expect = 0.26
Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 9/200 (4%)
Frame = +3
Query: 421 PPKKKQKKVRIVVKPTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPI 480
PP Q + KP V P A V P + P ++ +P
Sbjct: 177 PPTTSQPPAIVAPKPAPVTPPAPKVAPASSPKAPPPQTPQPQPPKVSPVVTPTSPPPIPP 356
Query: 481 SALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTS 540
+ S+ P P P+ P T P +P + P+P+ AP PT
Sbjct: 357 PPV---STPPPLPPPKIAPTPAKTPPAPAPAKA--TPAPAPAP----------TKPAPTP 491
Query: 541 LLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDH---------SAPRASERPAVRPTDTDS 591
P L+ P++ + P P + + R H AP + P D+ +
Sbjct: 492 APVPPPPTLAPTPVV-EVPAPAPSSHKHRRHRHRHRRHQAPAPAPTIVRKSPPAPPDSTA 668
Query: 592 STAFTPVSFPINTIDSPPSN 611
+ TP P +++ SN
Sbjct: 669 ESDTTPAPSPSLNLNAASSN 728
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 52.0 bits (123), Expect = 1e-06
Identities = 63/277 (22%), Positives = 101/277 (35%), Gaps = 8/277 (2%)
Frame = -2
Query: 480 ISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPT 539
IS + N P TT PP +P ++ SPS + + Q PT + PT
Sbjct: 1019 ISLCCKLDCNAQAPATVPVKLPPTTLPPTTPTAT----SPSSSTPLAVTQPPTVVASPPT 852
Query: 540 SLLTIPYDPLSSEPIIHDQPEPNQTEPQ-PRTSDHSAPRASERPAVRPTDTDSSTAFTPV 598
+ P +S+P + P+P +P P+ + S+P+A P + + +P
Sbjct: 851 TSTP----PTTSQPPANVAPKPAPVKPSAPKVAPASSPKAPP-PQIPIPQPPKPSPVSPP 687
Query: 599 SFPINTIDSPPSNTSENM-----RKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVD 653
P + SPP + + K + T P+P P P P
Sbjct: 686 PLPPPPVASPPPLPPPKIAPTPAKTPPSPAPAKATPAPAPAPTKPAPTPSPVPPPPAATP 507
Query: 654 PDEPILANPIQEADPLVQQEPIQPEPEPEHSVSNQSSVRSPH--PLVETSDPHLGTSEPN 711
P++ P P+++ P P P H + R H P + P
Sbjct: 506 APAPVIEVPAPAPAPVIE----VPAPAPAHHRHRRHRHRHRHRRHQAPAPAPTIIRKSPP 339
Query: 712 APMINIGSPQGASEAHSSNHPTSPESNLSIIPYTHRQ 748
AP P +E+ ++ P SP NL+ P H+Q
Sbjct: 338 AP------PDSTAESDTAPAP-SPSLNLNAAPSNHQQ 249
Score = 42.4 bits (98), Expect = 0.001
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 9/178 (5%)
Frame = -2
Query: 440 PAAATVR---RTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPE 496
PA V+ T PP T +S SS P LA + + P ++ +S P +
Sbjct: 980 PATVPVKLPPTTLPPTTPTATSPSSSTP-LAVTQPPTVVASPPTTSTPPTTSQPPANVAP 804
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIH 556
+ + P +P SS P P + P+ P P S +P P++S P +
Sbjct: 803 KPAPVKPSAPKVAPASSPKAPPP-QIPI------PQPPKPSPVSPPPLPPPPVASPPPLP 645
Query: 557 DQ---PEPNQTEPQP---RTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSP 608
P P +T P P + + AP A +PA P+ A TP P+ + +P
Sbjct: 644 PPKIAPTPAKTPPSPAPAKATPAPAP-APTKPAPTPSPVPPPPAATPAPAPVIEVPAP 474
>TC228913 weakly similar to UP|Q8IP68 (Q8IP68) CG31813-PA, partial (19%)
Length = 692
Score = 48.5 bits (114), Expect = 1e-05
Identities = 60/237 (25%), Positives = 84/237 (35%), Gaps = 10/237 (4%)
Frame = +2
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRSS---FFQPSPSEAPLWNLLQNPTSRSEDPTSLLT 543
S P T ++ +T PP SPRSS PSPS P + N S ++ L
Sbjct: 11 SQTPTTTTTATRRTTTSTLPPASPRSSSPPSSPPSPSTTPTSSAPANAPPSSPSASTRLQ 190
Query: 544 IPYDPLSSEPIIHDQPEPNQTEPQP-RTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPI 602
P P S T P+P TS +AP S P+ S++ T +S P
Sbjct: 191 TPSGPSSDA----------STSPKPTSTSSRAAPSKS------PSTWPSASLATSMSSPA 322
Query: 603 NTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPG----PRPERLVDPDEPI 658
+ PS ++ + A T PSP P P P P
Sbjct: 323 SPQPRVPSASTSSTTSAASPASASSVANTASVTTAPSPPSTPSTTTTPPPTARSTPSS-- 496
Query: 659 LANPIQEADPLVQQEPIQ-PEPEPEHSVSNQSSVRSP-HPLVETSDPHLGTSEPNAP 713
+NP P + + P P S +++SS SP P + H E + P
Sbjct: 497 -SNPTLSTSPTATPKRTRVSSPTPSSSSTSRSSRPSPKEPTATVTVSHTRGEEASKP 664
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 47.4 bits (111), Expect = 3e-05
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 10/180 (5%)
Frame = +3
Query: 450 PPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNP-LTPIPESQPAAQTTTPPH 508
PP R SS +S P + P S+ + S P TP S A +T
Sbjct: 183 PPPRSASSSTTASSPTAVTP---------PSSSPPRPSPGPSATPTSTSPSPATPSTSSS 335
Query: 509 SPRSSFFQPSPSEAPLWNLLQNPTSRS-------EDPTSLLTIPYDPLSSEPIIHDQPEP 561
+PR P+P+ +P P + S P+S +P S P P P
Sbjct: 336 APRPPLSSPAPTPSPAPTFSPPPPATSSPCSAAPSSPSSSAAATAEPPSPPPYPPTSPPP 515
Query: 562 N-QTEPQPRTSDHSA-PRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSENMRKF 619
+ P +S ++A P + P+V PT +DS TA P S + PP T +R F
Sbjct: 516 PCPSLKSPNSSPNAASPSKNSSPSVGPTPSDSLTA--PSSSRTSPTTLPPPTTLATLRGF 689
Score = 44.7 bits (104), Expect = 2e-04
Identities = 48/166 (28%), Positives = 60/166 (35%), Gaps = 8/166 (4%)
Frame = +3
Query: 485 QHSSNPLTPIPESQPAAQTTT---PPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSL 541
Q S +P P P + A+ +TT P S P PS P PTS S P +
Sbjct: 153 QASRSPAPPPPPPRSASSSTTASSPTAVTPPSSSPPRPSPGPS----ATPTSTSPSPATP 320
Query: 542 LT---IPYDPLSSEPIIHDQPEPNQTEPQPRTSD--HSAPRASERPAVRPTDTDSSTAFT 596
T P PLSS P P P + P P TS +AP + A + S +
Sbjct: 321 STSSSAPRPPLSS-PAPTPSPAPTFSPPPPATSSPCSAAPSSPSSSAAATAEPPSPPPYP 497
Query: 597 PVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRR 642
P S P N+S N + V LT PS R
Sbjct: 498 PTSPPPPCPSLKSPNSSPNAASPSKNSSPSVGPTPSDSLTAPSSSR 635
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 47.0 bits (110), Expect = 4e-05
Identities = 53/202 (26%), Positives = 74/202 (36%), Gaps = 4/202 (1%)
Frame = +2
Query: 487 SSNPLTPIPESQPAAQTTTP---PHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLT 543
SS+ P P S P+ TT+P PH+P S PS + +P + T+ P+ T
Sbjct: 32 SSSSS*PPPPSPPSPPTTSPACWPHTPAS---PPSTTTSPSPTWPKRSTAARPSPSWPST 202
Query: 544 IPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPIN 603
+P P SS P + P +S SAP++S R P + P S P
Sbjct: 203 MPPCPPSSTS-TSPSPPSKTSSPSTSSSTTSAPKSSTRSTTAPPSS------PPCSRPPA 361
Query: 604 TIDSPP-SNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANP 662
+PP ++TS R K + T R+ P P
Sbjct: 362 PPPAPPATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKCPTTSPSS------------ 505
Query: 663 IQEADPLVQQEPIQPEPEPEHS 684
+ A PL P P P P S
Sbjct: 506 -KSAPPLAPPTPRHPPPPPPPS 568
Score = 32.3 bits (72), Expect = 1.0
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Frame = +2
Query: 448 TEPPARVTRSSAHSSKPALASDDDLNLFD-ALPISALLQHSSNPLTPIPESQPA------ 500
T PP + +S S P+ S + + P S+ ++ P +P PA
Sbjct: 200 TMPPCPPSSTSTSPSPPSKTSSPSTSSSTTSAPKSSTRSTTAPPSSPPCSRPPAPPPAPP 379
Query: 501 AQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPE 560
A +T+P P S P + AP NP+ + PT+ + P + P P
Sbjct: 380 ATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKC--PTTSPSSKSAPPLAPPTPRHPPP 553
Query: 561 PNQTEPQPRTSDHSAPRASERPA 583
P P P T P + RP+
Sbjct: 554 P----PPPST*SPLCPNKAARPS 610
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 46.2 bits (108), Expect = 7e-05
Identities = 58/218 (26%), Positives = 77/218 (34%), Gaps = 9/218 (4%)
Frame = +3
Query: 486 HSSNPLTPIPESQPAAQTTTPPH-----SPRS----SFFQPSPSEAPLWNLLQNPTSRSE 536
H +PL + QP +T+PPH SP S S PSPS +S S
Sbjct: 156 HHPHPLWTQNKQQPLNPSTSPPHRTPAPSPPSTMPPSATPPSPSAT---------SSPSA 308
Query: 537 DPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
PT+ T P S P P P+ T P P + ++P S P+ P+ +++A +
Sbjct: 309 SPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPPS---ASPPTSPSPS-PPSPASTASANS 476
Query: 597 PVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDE 656
P S SP S TS T PSP P P
Sbjct: 477 PAS------GSPTSRTSP---------------------TSPSPTSTSKPPAPSSSSPA* 575
Query: 657 PILANPIQEADPLVQQEPIQPEPEPEHSVSNQSSVRSP 694
P + P PI P+P P S + SP
Sbjct: 576 P-------SSKPSPSPTPISPDPSPATSTPTSHTSISP 668
Score = 37.4 bits (85), Expect = 0.031
Identities = 43/160 (26%), Positives = 61/160 (37%), Gaps = 11/160 (6%)
Frame = +3
Query: 423 KKKQKKVRIVVKPTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISA 482
+ KQ+ + P PA + P A SA SS A + + + P S
Sbjct: 180 QNKQQPLNPSTSPPHRTPAPSPPSTMPPSATPPSPSATSSPSASPTAPPTSPSPSPPSSP 359
Query: 483 LLQHSSNPLTPIPESQPAAQTTTP---PHSPRSSFFQPSPSEAPLWNLLQNPTSR----S 535
+ +P + P A+ T+P P SP S+ SP+ +PTSR S
Sbjct: 360 SPPSAPSPSSTAPSPPSASPPTSPSPSPPSPASTASANSPASG-------SPTSRTSPTS 518
Query: 536 EDPTSLLTIPYDPLSSEPIIHDQPEPNQT----EPQPRTS 571
PTS P SS +P P+ T +P P TS
Sbjct: 519 PSPTSTSKPPAPSSSSPA*PSSKPSPSPTPISPDPSPATS 638
>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (44%)
Length = 996
Score = 45.4 bits (106), Expect = 1e-04
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 2/128 (1%)
Frame = +1
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRS--SFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTI 544
S++P P P+S P ++PP P S P P+ P L +P S P+S
Sbjct: 187 STSPAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPA 366
Query: 545 PYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINT 604
P S P P P P + + P + P P A P +
Sbjct: 367 SPPPASPPPASPPPASPPPASPPPASPPPATPPPASPPPFSPPPATPPPATPPPALTPTP 546
Query: 605 IDSPPSNT 612
+ SPP+ +
Sbjct: 547 LSSPPATS 570
Score = 41.2 bits (95), Expect = 0.002
Identities = 42/166 (25%), Positives = 57/166 (34%)
Frame = +1
Query: 440 PAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQP 499
PA T + + PP + + SS P S + P+S+ S P +P P S P
Sbjct: 196 PAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPASPP 375
Query: 500 AAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQP 559
A + PP SP + P P+ P P S P
Sbjct: 376 PA--SPPPASPPPA--SPPPASPP------------------------PASPPPATPPPA 471
Query: 560 EPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTI 605
P P P T P A+ PA+ PT S A +P P +
Sbjct: 472 SPPPFSPPPAT----PPPATPPPALTPTPLSSPPATSPAPAPAKVV 597
Score = 33.9 bits (76), Expect = 0.35
Identities = 28/102 (27%), Positives = 41/102 (39%), Gaps = 1/102 (0%)
Frame = +1
Query: 421 PPKKKQKKVRIVVKPTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPI 480
PP + P P ++ + PPA +S + P AS + A P
Sbjct: 286 PPASTPPPAPLSSPPPASPPPSSPPPASPPPASPPPASPPPASPPPASPPPASPPPATPP 465
Query: 481 SAL-LQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSE 521
A S P TP P + P A T TP SP ++ P+P++
Sbjct: 466 PASPPPFSPPPATPPPATPPPALTPTPLSSPPATSPAPAPAK 591
Score = 30.8 bits (68), Expect = 2.9
Identities = 44/185 (23%), Positives = 57/185 (30%), Gaps = 7/185 (3%)
Frame = +1
Query: 545 PYDPLSSEPIIHDQPEPNQTEPQPRTS------DHSAPRASERPAVRPTDTDSSTAFTPV 598
P P SS P I P P + P P S AP +S PA P + + P
Sbjct: 202 PPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPASPPPA 381
Query: 599 SFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPI 658
S P PP++ P P P P P P
Sbjct: 382 SPP--PASPPPAS--------------------------PPPASPPPASP----PPATPP 465
Query: 659 LANPIQEADPLVQQEPIQPEPEPEHSVSNQSSVRSPHPL-VETSDPHLGTSEPNAPMINI 717
A+P + P P P P + + SP P + P L S P ++
Sbjct: 466 PASPPPFSPPPATPPPATPPPALTPTPLSSPPATSPAPAPAKVVAPALSPSLAPGPSLST 645
Query: 718 GSPQG 722
SP G
Sbjct: 646 ISPSG 660
>TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall protein,
partial (48%)
Length = 1076
Score = 44.3 bits (103), Expect = 3e-04
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Frame = +3
Query: 440 PAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQP 499
PA T + + PP + + SS P S + P+S+ S P +P P S P
Sbjct: 288 PAPPTPQASPPPVQSSPPPVPSSPPPSQSPPPASTPPPSPLSSPPPSSPPPSSPPPSSPP 467
Query: 500 AAQ---TTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSL----LTIPYDPLSSE 552
A ++ PP SP S P PS P ++ + P ++ LT PLSS
Sbjct: 468 PASPPPSSPPPASPPPS--SPPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVTPLSSP 641
Query: 553 PIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDS 591
P+ P P++ P S AP S + P+ DS
Sbjct: 642 PVSSPAPSPSKVF-APALSPSLAPGPS-LSTISPSGDDS 752
Score = 43.9 bits (102), Expect = 3e-04
Identities = 35/126 (27%), Positives = 48/126 (37%), Gaps = 3/126 (2%)
Frame = +3
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPY 546
S++P P P++ P ++PP P S P PS++P P+ S P S
Sbjct: 279 STSPAPPTPQASPPPVQSSPPPVPSS----PPPSQSPPPASTPPPSPLSSPPPSSPPPSS 446
Query: 547 DPLSSEPIIHDQP-EPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSF--PIN 603
P SS P P P P P + S+P P P A P S +
Sbjct: 447 PPPSSPPPASPPPSSPPPASPPPSSPPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVT 626
Query: 604 TIDSPP 609
+ SPP
Sbjct: 627 PLSSPP 644
Score = 30.8 bits (68), Expect = 2.9
Identities = 46/202 (22%), Positives = 65/202 (31%), Gaps = 3/202 (1%)
Frame = +3
Query: 524 LWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPA 583
++ L+ ++++ P S P P +S P + P P + P P S A P
Sbjct: 234 IFTLVAGVGAQAQGP-STSPAPPTPQASPPPVQSSPPPVPSSPPPSQSPPPASTPPPSPL 410
Query: 584 VRPTDTDSSTAFTPVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRY 643
P + + P S P PPS+ P P
Sbjct: 411 SSPPPSSPPPSSPPPSSP-PPASPPPSS--------------------------PPPASP 509
Query: 644 PGPRPERLVDPDEPILANPIQEADPLVQQEPIQPEPEPEHSVSNQSS--VRSPHPL-VET 700
P P P P +P P P P P +V+ SS V SP P +
Sbjct: 510 PPSSP----PPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVTPLSSPPVSSPAPSPSKV 677
Query: 701 SDPHLGTSEPNAPMINIGSPQG 722
P L S P ++ SP G
Sbjct: 678 FAPALSPSLAPGPSLSTISPSG 743
>NP005385 DNA-directed RNA polymerase
Length = 2934
Score = 43.5 bits (101), Expect = 4e-04
Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 5/174 (2%)
Frame = +1
Query: 440 PAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPI-PESQ 498
P + T P T + + PA +S P + S +P +P +
Sbjct: 2323 PTSPAYSPTSPSYSPTSPAYSPTSPAYSSTS--------PAYSPTSPSYSPTSPAYSPTS 2478
Query: 499 PAAQTTTPPHSPRSSFFQP-SPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHD 557
P+ T+P +SP S + P SPS +P + +PTS S PTS P P +
Sbjct: 2479 PSYSLTSPSYSPTSPSYSPTSPSYSPT-SPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 2655
Query: 558 QPEPNQTEPQPRTSDHSAPRASERPAVRPTD---TDSSTAFTPVSFPINTIDSP 608
P + PR S S + P+ PT + SS ++P S P N+ SP
Sbjct: 2656 SPSLAYSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYNSGVSP 2814
Score = 37.4 bits (85), Expect = 0.031
Identities = 29/107 (27%), Positives = 45/107 (41%), Gaps = 4/107 (3%)
Frame = +1
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDP-LSSEPII 555
+ P T+P +SP S + PS + +PTS S PTS P P SS
Sbjct: 2242 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPA 2421
Query: 556 HDQPEPNQTEPQPRTSDHSAPRASERPAVRPTD---TDSSTAFTPVS 599
+ P+ + P S S + P+ PT + +S +++P S
Sbjct: 2422 YSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTS 2562
Score = 36.2 bits (82), Expect = 0.070
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Frame = +1
Query: 440 PAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQP 499
P + T P +T S + P+ + P S +S +P + P
Sbjct: 2449 PTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSP----SYSPTSPAYSPTSPSYSP---TSP 2607
Query: 500 AAQTTTPPHSPRSSFFQPSPSEAPLWNLLQ------NPTSRSEDPTSLLTIPYDPLSSEP 553
+ T+P ++P+S+ + PS + +P L +PTS S PTS P P S
Sbjct: 2608 SYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 2787
Query: 554 IIHD---QPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
++ P+ + T PQ SA + +P P+ T T T
Sbjct: 2788 SPYNSGVSPDYSPTSPQ---FSPSAGYSPSQPGYSPSSTSQDTPQT 2916
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Frame = +1
Query: 497 SQPAAQTTTPPHSPRSSFFQP-SPSEAPL------WNLLQNPTSRSEDPTSLLTIPYDPL 549
S P T+P +SP S + P SP+ +P + +PTS S PTS P P
Sbjct: 2305 SSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSP- 2481
Query: 550 SSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTD---TDSSTAFTPVS 599
+ P+ + P S S + PA PT + +S +++P S
Sbjct: 2482 -----SYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 2625
Score = 32.3 bits (72), Expect = 1.0
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +1
Query: 497 SQPAAQTTTPPHSPRSSFFQP-SPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPII 555
+ P ++P +SP S + P SPS +P + +PTS + TS P P S
Sbjct: 2284 TSPTYSPSSPGYSPTSPAYSPTSPSYSPT-SPAYSPTSPAYSSTSPAYSPTSPSYSP--- 2451
Query: 556 HDQPEPNQTEPQ-PRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSP---PSN 611
P + T P TS +P + P+ + +S A++P S P + SP P++
Sbjct: 2452 -TSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS-PSYSPTSPSYSPTS 2625
Query: 612 TSEN 615
S N
Sbjct: 2626 PSYN 2637
>TC206203 UP|Q99366 (Q99366) DNA-directed RNA polymerase (Fragment) , partial
(96%)
Length = 2604
Score = 43.1 bits (100), Expect = 6e-04
Identities = 66/259 (25%), Positives = 92/259 (35%), Gaps = 6/259 (2%)
Frame = +1
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIH 556
+ P T+P +SP S + PS + +PTS S PTS P P S
Sbjct: 1159 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1338
Query: 557 DQP-EPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSEN 615
P P+ + P S S + PA PT + S + +P P + SP S +
Sbjct: 1339 YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSP 1515
Query: 616 MRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQEPI 675
S Y P+ Y P P P + P + P
Sbjct: 1516 TSPSYSPTSPAYSPTSPGY--SPTSPSYSPTSPS--YSPTSPSYNPQSAKYSPSLAYSPS 1683
Query: 676 QPEPEPEHSVSNQSSVRSPHPLVETSDPHLGTS---EPNAPMINIGSP--QGASEAHSSN 730
P P S S SP TS + TS P++P + SP G S +S
Sbjct: 1684 SPRLSPSSPYSPTSPNYSP-----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS-- 1842
Query: 731 HPTSPESNLSIIPYTHRQP 749
P+SP+ + S Y+ QP
Sbjct: 1843 -PSSPQFSPS-TGYSPSQP 1893
Score = 42.0 bits (97), Expect = 0.001
Identities = 70/274 (25%), Positives = 100/274 (35%), Gaps = 7/274 (2%)
Frame = +1
Query: 479 PISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQP-SPSEAPLWNLLQNPTSRSED 537
P S SS +P + PA T+P +SP S + P SPS +P + +PTS S
Sbjct: 1198 PTSPTYSPSSPGYSP---TSPAYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYS 1365
Query: 538 PTSLLTIPYDP-LSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTD---TDSST 593
PTS P P S + P+ + P S S + P+ PT + +S
Sbjct: 1366 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1545
Query: 594 AFTPVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVD 653
A++P S + S TS + S Y P +Y P
Sbjct: 1546 AYSPTSPGYSPTSPSYSPTSPS-----------YSPTSPSY--NPQSAKY---SPSLAYS 1677
Query: 654 PDEPILANPIQEADPLVQQEPIQPEPEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAP 713
P P L+ + P P P +S ++ S S +S + G S +P
Sbjct: 1678 PSSPRLS----PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 1845
Query: 714 MINIGSPQ-GASEAHSSNHP-TSPESNLSIIPYT 745
SPQ S +S + P SP S P T
Sbjct: 1846 ----SSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 1935
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 43.1 bits (100), Expect = 6e-04
Identities = 57/236 (24%), Positives = 81/236 (34%), Gaps = 6/236 (2%)
Frame = +3
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRSS---FFQPSPSEAPLWNLLQNPTSRSEDPTSLLT 543
S P ++ +T PP SPRSS PSPS P + N S +
Sbjct: 72 SQTPTRTTTATRRTTTSTLPPASPRSSSPPSSPPSPSTTPTSSAPGNAPHSSPSASKRRP 251
Query: 544 IPYDPLSSEPIIHDQPEPNQTEPQP-RTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPI 602
P P S+ T P+P TS +AP S P S++ T +S P
Sbjct: 252 TPSGPSSAA----------STSPKPTSTSSRAAPSKS------PFTWPSASLGTSMSSPA 383
Query: 603 NTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANP 662
+ P+ ++ + +A T PS P R P +NP
Sbjct: 384 SPPPPAPNASTSSTTSAASPALASSAANTASATTAPSLPSIPS-RTTPTTARSTPSSSNP 560
Query: 663 IQEADPLVQQEPIQ-PEPEPEHSVSNQSSVRSP-HPLVETSDPHLGTSEPNAPMIN 716
P + + P P S +++SS SP P + H E N P N
Sbjct: 561 TSSTSPTATPKRTRVSSPTPSSSSTSRSSPPSPKEPTATVTVSHTRGEEANTPQ*N 728
>TC209975 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (9%)
Length = 537
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/124 (29%), Positives = 49/124 (38%), Gaps = 3/124 (2%)
Frame = +1
Query: 490 PLTPIPESQPAAQTTTPPHSPRSSF---FQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPY 546
P TP P P TPP +P S F P+P + P +PTS+ + P
Sbjct: 82 PKTPSPSYSPP-NVPTPPKTPSPSSQPPFTPTPPKTP------SPTSQPP----YIPTPP 228
Query: 547 DPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTID 606
P+S P I P QP P S P+ P+ + SS P S+ +
Sbjct: 229 SPISQPPSIATPPNTLSPTSQPPYPSTIPPSTSLSPSYPPSPSPSSAPTYPPSY-LAPAT 405
Query: 607 SPPS 610
SPPS
Sbjct: 406 SPPS 417
Score = 37.0 bits (84), Expect = 0.041
Identities = 36/110 (32%), Positives = 44/110 (39%), Gaps = 5/110 (4%)
Frame = +1
Query: 479 PISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDP 538
PIS ++ P T P SQP +T PP + S + PSPS P+S P
Sbjct: 232 PISQPPSIATPPNTLSPTSQPPYPSTIPPSTSLSPSYPPSPS----------PSSAPTYP 381
Query: 539 TSLL---TIPYDPLSS--EPIIHDQPEPNQTEPQPRTSDHSAPRASERPA 583
S L T P P +S P I P T P P +S S PA
Sbjct: 382 PSYLAPATSPPSPSTSATTPTI----SPAATTPSPSSSSSSGASNETTPA 519
>TC224734 homologue to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (48%)
Length = 990
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/173 (27%), Positives = 59/173 (33%), Gaps = 3/173 (1%)
Frame = +2
Query: 489 NPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPT-SRSEDPTSLLTIPYD 547
+P P P P + PP+ +S PSPS P + P S S P P
Sbjct: 53 SPPPPSPSPPPPDPSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPP 229
Query: 548 PLSSEP--IIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTI 605
P S P + P P P P S P S P P S +PVS P
Sbjct: 230 PSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPP-PYYYKSPPPPSPVSHPPYYY 406
Query: 606 DSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPI 658
SPP TS + HY++ P P + P P P PI
Sbjct: 407 KSPPPPTSSPPPPY-------------HYVSPPPPTKSPPPPVYIYASPPPPI 526
Score = 34.3 bits (77), Expect = 0.26
Identities = 47/187 (25%), Positives = 55/187 (29%), Gaps = 5/187 (2%)
Frame = +2
Query: 517 PSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAP 576
PSPS P + P P P DP P + P P P P S P
Sbjct: 17 PSPSPPPPYYYKSPPPPSPSPP------PPDPSPPPPYYYKSPPPPSPSPPPPYYYKSPP 178
Query: 577 RASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLT 636
S P P S +P P SPP + S +Y
Sbjct: 179 PPSPSPP-PPYYYKSPPPPSPSPPPPYYYKSPPPPSP--------------SPPPPYYYK 313
Query: 637 CPSPRRYPGPRPE-----RLVDPDEPILANPIQEADPLVQQEPIQPEPEPEHSVSNQSSV 691
P P P P P + P P+ P P P P P H VS
Sbjct: 314 SPPP---PSPSPPPPYYYKSPPPPSPVSHPPYYYKSP---PPPTSSPPPPYHYVSPPPPT 475
Query: 692 RSPHPLV 698
+SP P V
Sbjct: 476 KSPPPPV 496
>TC209595 homologue to GB|AAL62011.1|18252261|AY072620 AT5g08330/F8L15_60
{Arabidopsis thaliana;} , partial (56%)
Length = 869
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/166 (27%), Positives = 56/166 (33%)
Frame = +2
Query: 368 PPAPEFPSPPKKKTKRKMVLEESSEESDVPLVKKSKRKPDDDDDDDDDDGEDGPPKKKQK 427
PP P P PP R + ++ S V + R PP
Sbjct: 47 PPPP--PPPPPPSPSRNRLPRTATARSTVAGAAFACRS-------------SAPPASSSS 181
Query: 428 KVRIVVKPTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHS 487
+ PT P++ + R PP+ S PA A L A P+S S
Sbjct: 182 RASSATSPT-ARPSSGSSARRNPPS--------SPLPAPAP-----LRRASPLSPTTSPS 319
Query: 488 SNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTS 533
S PL P + A TTTPP S P P P L PTS
Sbjct: 320 SLPLPPSSSANAFALTTTPPPKTTPSRSSPPPRRPPSGPYLPAPTS 457
>TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), partial (46%)
Length = 708
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 3/192 (1%)
Frame = +3
Query: 493 PIPESQPAAQTTTPPHSPRSS---FFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPL 549
P P P + PP SP +++ P +P++ + ++P S PT + P P+
Sbjct: 15 PPPSPTPYYYHSPPPPSPSPPSPYYYKSPPPPSPVY-IYKSPPPPS--PTYVYKSPPPPV 185
Query: 550 SSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPP 609
S P + P P +P+P S P S +P P S +PV P SPP
Sbjct: 186 KSPPYYYQSPPPPSPKPKPPYYYKSPPPPSPKPK-PPYYYQSPPPPSPVPKPPYYYKSPP 362
Query: 610 SNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPL 669
V +Y + P P P P P P P + P P
Sbjct: 363 P-------------PSPVPKPPYYYHSPPPPSPSP-PPPYYYKSPPPPSPSPP----PPY 488
Query: 670 VQQEPIQPEPEP 681
+ P P P P
Sbjct: 489 YYKSPPPPSPSP 524
>TC206202 UP|Q99367 (Q99367) DNA-directed RNA polymerase (Fragment) ,
complete
Length = 1826
Score = 42.0 bits (97), Expect = 0.001
Identities = 64/258 (24%), Positives = 91/258 (34%), Gaps = 5/258 (1%)
Frame = +3
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIH 556
+ P T+P +SP S + PS + +PTS S PTS P P +
Sbjct: 702 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP------SY 863
Query: 557 DQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSENM 616
P+ + P S S + PA PT + S + +P P + SP S +
Sbjct: 864 SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPT 1040
Query: 617 RKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQEPIQ 676
S Y P+ Y P P P + P + P
Sbjct: 1041SPSYSPTSPAYSPTSPGY--SPTSPSYSPTSPS--YSPTSPSYNPQSAKYSPSLAYSPSS 1208
Query: 677 PEPEPEHSVSNQSSVRSPHPLVETSDPHLGTS---EPNAPMINIGSP--QGASEAHSSNH 731
P P S S SP TS + TS P++P + SP G S +S
Sbjct: 1209PRLSPSSPYSPTSPNYSP-----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS--- 1364
Query: 732 PTSPESNLSIIPYTHRQP 749
P+SP+ + S Y+ QP
Sbjct: 1365PSSPQFSPS-TGYSPSQP 1415
Score = 40.4 bits (93), Expect = 0.004
Identities = 65/256 (25%), Positives = 93/256 (35%), Gaps = 7/256 (2%)
Frame = +3
Query: 497 SQPAAQTTTPPHSPRSSFFQP-SPSEAPLWNLLQNPTSRSEDPTSLLTIPYDP-LSSEPI 554
S P T+P +SP S + P SPS +P + +PTS S PTS P P S
Sbjct: 765 SSPGYSPTSPAYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 941
Query: 555 IHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTD---TDSSTAFTPVSFPINTIDSPPSN 611
+ P+ + P S S + P+ PT + +S A++P S + S
Sbjct: 942 AYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1121
Query: 612 TSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQ 671
TS + S Y P +Y P P P L+ + P
Sbjct: 1122TSPS-----------YSPTSPSY--NPQSAKY---SPSLAYSPSSPRLS----PSSPYSP 1241
Query: 672 QEPIQPEPEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQ-GASEAHSSN 730
P P +S ++ S S +S + G S +P SPQ S +S +
Sbjct: 1242TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP----SSPQFSPSTGYSPS 1409
Query: 731 HP-TSPESNLSIIPYT 745
P SP S P T
Sbjct: 1410QPGYSPSSTSQYTPQT 1457
>AW348715
Length = 713
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
Frame = +2
Query: 485 QHSSNPLT------PIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDP 538
Q SS P T P P P + +PP P S +P + P
Sbjct: 227 QSSSQPPTCTASSPPAPPRTPVPRAASPPTHPLCSCTSAAPGQTP-------------PK 367
Query: 539 TSLLTIPYDPLSSEPIIHDQPE--PNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
++LL+ P P S +P PE TEP P APR+ R +P T SS
Sbjct: 368 STLLSPPISPTSEDPPQPHAPEKCTPSTEPDPSEPPTVAPRSRTR---QPPATASSPQLA 538
Query: 597 PVSFPINTIDS 607
P + T+ S
Sbjct: 539 PAPCTLPTLQS 571
>TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase , complete
Length = 1675
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 16/140 (11%)
Frame = +1
Query: 492 TPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPL-WNL-LQNPTSRSEDPTSLLTIPYDPL 549
+P P S P TTPP PR S SPS AP W + P+S PTS + P
Sbjct: 208 SPRPSSGP*---TTPPLPPRPSATTRSPSSAPATWEWPSRRPSSLRTSPTSSSSSTPTPT 378
Query: 550 SSEPIIHDQPEPNQTEPQPR-------------TSDHSAPRASERPAVRPTDTDSSTAFT 596
SS P + P PR TS S P + PA + + T+ +
Sbjct: 379 SSAARCSTSSTPPPSSPAPRSTPPPTPPSPPAPTSASSPPAPARSPASHASTSSRGTSPS 558
Query: 597 PVS-FPINTIDSPPSNTSEN 615
FP++++ +PP+ S +
Sbjct: 559 SAPLFPLSSV-TPPTQLSSS 615
Score = 35.0 bits (79), Expect = 0.16
Identities = 43/165 (26%), Positives = 62/165 (37%), Gaps = 2/165 (1%)
Frame = +1
Query: 437 RVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPE 496
R P +++ P + R S S+ P + P S +P P
Sbjct: 334 RTSPTSSSSSTPTPTSSAARCSTSSTPPPSSP---------APRSTPPPTPPSPPAPTSA 486
Query: 497 SQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIH 556
S P A +P +S SPS APL+ P S PT L +
Sbjct: 487 SSPPAPARSPASHASTSSRGTSPSSAPLF-----PLSSVTPPTQLSS------------- 612
Query: 557 DQPEPNQTEPQPR-TSDHSAPRASERPAVRPTDT-DSSTAFTPVS 599
P P+ + P R +S S P AS PA PT T +S + +P++
Sbjct: 613 SFPTPSTSSPTSRGSSPASPPTASSAPA--PTWTLPASVSSSPIT 741
Score = 30.8 bits (68), Expect = 2.9
Identities = 49/208 (23%), Positives = 67/208 (31%), Gaps = 13/208 (6%)
Frame = +1
Query: 559 PEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSENMRK 618
P P+ T P SAP E P+ RP+ +S P ++ S P+ TS R
Sbjct: 253 PRPSATTRSPS----SAPATWEWPSRRPSSLRTS--------PTSSSSSTPTPTSSAAR- 393
Query: 619 FMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQEPIQPE 678
S + P+PR P P P
Sbjct: 394 --------CSTSSTPPPSSPAPRSTPPPTPPS---------------------------P 468
Query: 679 PEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGS-------------PQGASE 725
P P + S + RSP TS GTS +AP+ + S P +S
Sbjct: 469 PAPTSASSPPAPARSPASHASTSSR--GTSPSSAPLFPLSSVTPPTQLSSSFPTPSTSSP 642
Query: 726 AHSSNHPTSPESNLSIIPYTHRQPTSLS 753
+ P SP + S T P S+S
Sbjct: 643 TSRGSSPASPPTASSAPAPTWTLPASVS 726
>TC226995 similar to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
(GDP-D-mannose dehydratase) (GMD) , partial (59%)
Length = 679
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Frame = +3
Query: 487 SSNPLTPIPE--------SQPAAQTTTPPHSPRSSFFQPSPSEAPL--------WNLLQN 530
S+ P++P P S P TT+PP SP S SP+ P ++
Sbjct: 213 STTPISPTPPPSAAGSTPSSPTRSTTSPP-SPTSPTHSRSPTTPPTSSPPAPSAYSRPIA 389
Query: 531 PTS-RSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASER-PAVRPTD 588
PTS + PTS T P P S P + +P P P T +AP RPT
Sbjct: 390 PTSPTTAAPTSATTKPAPPRCSAPPLRRNRKPLACTPAPHTPAANAPTTGTP*TTARPTP 569
Query: 589 TDSSTAFTPVSFP 601
+ +TA + + P
Sbjct: 570 SSPATASSLTNDP 608
>TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {Arabidopsis
thaliana;} , partial (68%)
Length = 1307
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/122 (31%), Positives = 53/122 (43%)
Frame = +2
Query: 489 NPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDP 548
NP TP S P +T S R +F PS PL + + PT PT+ P P
Sbjct: 518 NPSTPPKPSAPPTTSTASSASLRLAF----PSAPPLVSAMP-PT-----PTNAPPPPSPP 667
Query: 549 LSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSP 608
S+ P P P+ + S S P +S P+ R T + +S++ P S N +P
Sbjct: 668 PSATPPSSTSPSPSTSSTSAAPSPPSTP-SSNTPSARRTSSSTSSSPKPTS---NPSSNP 835
Query: 609 PS 610
PS
Sbjct: 836 PS 841
Score = 37.7 bits (86), Expect = 0.024
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 19/172 (11%)
Frame = +2
Query: 449 EPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTT---- 504
+P A T S+A S+ LA L A+P + ++ P +P P + P + T+
Sbjct: 536 KPSAPPTTSTASSASLRLAFPSAPPLVSAMPPTPT--NAPPPPSPPPSATPPSSTSPSPS 709
Query: 505 --------TPPHSP-------RSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPL 549
+PP +P R + S S P N NP S + S+ IP
Sbjct: 710 TSSTSAAPSPPSTPSSNTPSARRTSSSTSSSPKPTSNPSSNPPSLN*TSRSITLIPRSSA 889
Query: 550 SSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFP 601
+ P D+P N P T+ S PA R T + F+ + P
Sbjct: 890 T*SPPPSDKPSNN-----PSTTPEITSLTSSNPASRGLYTSTPIWFSSTTLP 1030
Score = 32.3 bits (72), Expect = 1.0
Identities = 55/248 (22%), Positives = 87/248 (34%), Gaps = 10/248 (4%)
Frame = +2
Query: 501 AQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPE 560
++ ++PP SSF P P P + S ++ L + + S+ P++ P
Sbjct: 464 SRASSPPQC--SSFSSPLPFNPSTPPKPSAPPTTSTASSASLRLAFP--SAPPLVSAMPP 631
Query: 561 PNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTSENMRKFM 620
P P + P A+ + P+ + SST+ P SPPS S N
Sbjct: 632 TPTNAPPPPSPP---PSATPPSSTSPSPSTSSTSAAP---------SPPSTPSSNTPSAR 775
Query: 621 EVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQEPIQPEPE 680
S+ P P P P L N + L+ + P
Sbjct: 776 RTSSSTSSS--------PKPTSNPSSNPPSL---------N*TSRSITLIPRSSAT*SPP 904
Query: 681 PEHSVSNQSSVRSPHPLVETSDP---HLGTSEP----NAPMINIGSPQGASE---AHSSN 730
P SN S + +S+P L TS P + + + G+P E S+
Sbjct: 905 PSDKPSNNPSTTPEITSLTSSNPASRGLYTSTPIWFSSTTLPSSGAPV*VLEPLAPPSTA 1084
Query: 731 HPTSPESN 738
PTSP ++
Sbjct: 1085TPTSPSTS 1108
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,414,293
Number of Sequences: 63676
Number of extensions: 667055
Number of successful extensions: 8608
Number of sequences better than 10.0: 488
Number of HSP's better than 10.0 without gapping: 5842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7307
length of query: 944
length of database: 12,639,632
effective HSP length: 106
effective length of query: 838
effective length of database: 5,889,976
effective search space: 4935799888
effective search space used: 4935799888
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0593a.4