TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0546.8
         (898 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC208963                                                              205  6e-53
TC211617                                                              170  3e-42
BM525744                                                              150  3e-36
TC218095                                                              149  7e-36
TC218096                                                              140  3e-33
BG839904                                                              118  1e-26
TC234242                                                              104  2e-22
BU545334                                                              102  6e-22
TC210791                                                               60  5e-17
AW761314                                                               86  9e-17
BE057981                                                               84  2e-16
TC218819 similar to UP|O03160 (O03160) NADH dehydrogenase subuni...    79  9e-15
BI786825                                                               66  8e-11
AW507853                                                               64  4e-10
TC224081                                                               59  9e-09
AW781991                                                               47  3e-05
TC234876 similar to UP|Q7RNR5 (Q7RNR5) 60S ribosomal protein L27...    47  3e-05
BM892478                                                               47  4e-05
AI736706                                                               47  5e-05
BG882562                                                               41  0.003

>TC208963 
          Length = 1163

 Score =  205 bits (522), Expect = 6e-53
 Identities = 125/365 (34%), Positives = 185/365 (50%), Gaps = 52/365 (14%)
 Frame = +1

Query: 283 IINEDNLPKVFVTDKDQVLMEALETVFPAARCLLCQFHVLKSVTGEMKKLVKDIETREDI 342
           I  +D++P+V VT  D  LM A++ VFP++  LLC+FH+ ++V  + K +V   E +E +
Sbjct: 1   IAKDDDMPQVIVTVGDIALMSAVQVVFPSSSNLLCRFHINQNVKAKCKSIVHLKEKQELM 180

Query: 343 TDRWNRLMYAANEVEYDKAVGAMSNT----GELWTYIETNWL------------------ 380
            D W+ ++ + NE EY + +    N       L  Y++  WL                  
Sbjct: 181 MDAWDVVVNSPNEGEYMQRLAFFENVCLDFPILGDYVKNTWLIPHKEKFVTAWTNQVMHL 360

Query: 381 -------------------------PLRSKFVKFEIDTCMHMGCTTTNRVEGAHSKLKKL 415
                                    P + KFV    +  MH+G T TNRVE  H +LK L
Sbjct: 361 GNTATNRFAQTLYFE*FIRKNT*LIPHKEKFVTAWTNRVMHLGNTATNRVEATHWRLKTL 540

Query: 416 LSDSKGDLVIAWTAMNKLIIMQHDKIKESFQLSIFVTEHSLNDPFYKHLRGFVSRAALHI 475
           L DSK D+   W AM  +I +QH +I+ SF+ S  V EH  N PFY  L GFVSR+AL  
Sbjct: 541 LQDSKEDMCSYWDAMKNMITLQHTEIEASFEKSKNVVEHRHNTPFYVKLVGFVSRSALSH 720

Query: 476 IVKEKTQIGMIGVGGIYCECVLRRTHGLPCACELMKFES----VPLLAIHPHWRKLTWDS 531
           I +E  ++   G+    C C++R THGLPCACEL ++ +    +PL AIH HWRKL + S
Sbjct: 721 ITEEYDRVKTAGIDSSICGCIVRTTHGLPCACELARYSTMCHPIPLEAIHAHWRKLKF-S 897

Query: 532 SDRDMDPTLGLSFESEFDKLRTKFEESSHGVRMSIIESLRMITYPETTSMCAPTKK-KTR 590
                D    LS + E D L  +F+E  +  ++ ++  L  + +P+T   C P ++  T+
Sbjct: 898 DHGTNDNGSELSLQPEVDALYKRFQELDYAGKIILMAKLHEMAFPDTALKCLPPEEVGTK 1077

Query: 591 GRPMG 595
           G P G
Sbjct: 1078GAPEG 1092


>TC211617 
          Length = 534

 Score =  170 bits (430), Expect = 3e-42
 Identities = 81/176 (46%), Positives = 112/176 (63%)
 Frame = -1

Query: 59  GCERGGKYKPSTSVLKRNRTGTKKCNCPFRLRARRSNKDKMWTVLVHSGIHNHDTAEVLQ 118
           GCER GKYK       R  T T+KC CPF++R +  +  + WTV +  GIHNH+ A+ L 
Sbjct: 534 GCERSGKYKCRKKEFVRRDTCTRKCGCPFKIRGKPMHGGEGWTVKLICGIHNHELAKTLV 355

Query: 119 GHSYVGRLNPEEKAMVGEMIEERVKASDILIAIRKHNPTNLTRIKQIYNEKQAYNRLKRG 178
            H Y GRL  +EK ++ +M +  VK  +I + +++HN  + T IKQIYN + AY+   RG
Sbjct: 354 EHPYAGRLTDDEKNIIADMTKSNVKPRNIQLTLKEHNTNSCTTIKQIYNARSAYHSSIRG 175

Query: 179 SLTEMQHLMKLLEEHKYAHWSRVQDGTDVVRSLFWAHPDSIHLFNEFPHVVILDST 234
             TEMQHLM+LL+  +Y HW R++D  DVVR LFW HPD++ L N    V ++DST
Sbjct: 174 DDTEMQHLMRLLKRDQYIHWHRLKD-QDVVRDLFWCHPDAVKLCNTCHLVFLIDST 10


>BM525744 
          Length = 411

 Score =  150 bits (378), Expect = 3e-36
 Identities = 70/137 (51%), Positives = 101/137 (73%)
 Frame = +3

Query: 132 AMVGEMIEERVKASDILIAIRKHNPTNLTRIKQIYNEKQAYNRLKRGSLTEMQHLMKLLE 191
           ++V +M ++ V+  +IL+ ++ HN  N T I+ IYN +QAY   ++G  TEMQHL+KLLE
Sbjct: 3   SLVIDMTKKMVEPRNILLTLKDHN--NDTTIRHIYNARQAYRSSQKGPRTEMQHLLKLLE 176

Query: 192 EHKYAHWSRVQDGTDVVRSLFWAHPDSIHLFNEFPHVVILDSTYKTNRYRIPLLEMVGVT 251
             +Y  WSR  D +D +R +FWAHPD+I L   F  V+ LD+TYK NRY++PLLE+VGVT
Sbjct: 177 HDQYVCWSRKVDDSDAIRDIFWAHPDAIKLLGSFHTVLFLDNTYKVNRYQLPLLEIVGVT 356

Query: 252 STNLTYSIAFAYMQNEQ 268
           ST LT+S+AFAYM++++
Sbjct: 357 STELTFSVAFAYMESDE 407


>TC218095 
          Length = 925

 Score =  149 bits (375), Expect = 7e-36
 Identities = 74/201 (36%), Positives = 121/201 (59%), Gaps = 2/201 (0%)
 Frame = +1

Query: 696 LKQIPGEFHPFVVDFINVKGDGHCGYRCVASLKGLAEDDWPLIRRELLTEIDSDANMYIN 755
           + Q P E HPF+ D I+VKGD +CGYR VA+  G+ E+ W L+R++L+ E+    + Y  
Sbjct: 103 MDQFPVEIHPFIEDIIDVKGDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAK 282

Query: 756 MFGASE-VNQMRLALTVKDTKPVGEDKWMMIPNMAYLISTTYKFIVLTIANTGCNTFYPL 814
           +FG+++ V ++R +L V   K      WM IP+M Y+I++ Y  +++T++   C TF+PL
Sbjct: 283 LFGSNDRVAELRKSLYV--GKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPL 456

Query: 815 KGKADLVE-EHKFMPIVLVNKDHFVGVTLREGHPMPTTAHLWAYNCHPDARKWEEPYKER 873
           +G+  L +  H+ + I  V+K HFV V L+    +P TA  W+  C+ ++R WE  Y  R
Sbjct: 457 RGRPPLSQSSHRLISIGFVHKCHFVQVVLKADSAIPPTALQWSRYCNAESRSWETSYVSR 636

Query: 874 IEEYAAYLKQKNGGCSDDIID 894
           ++++ +   QK  G  D I D
Sbjct: 637 MQQFRSLFPQKEIGYVDIIED 699


>TC218096 
          Length = 806

 Score =  140 bits (352), Expect = 3e-33
 Identities = 70/195 (35%), Positives = 117/195 (59%), Gaps = 2/195 (1%)
 Frame = +3

Query: 702 EFHPFVVDFINVKGDGHCGYRCVASLKGLAEDDWPLIRRELLTEIDSDANMYINMFGASE 761
           E HPF+ D I+VKG  +CGYR VA+  G+ E+ W L+R++L+ E+    + Y  +FG+++
Sbjct: 54  EIHPFIEDIIDVKGXSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLFGSND 233

Query: 762 -VNQMRLALTVKDTKPVGEDKWMMIPNMAYLISTTYKFIVLTIANTGCNTFYPLKGKADL 820
            V ++R +L V   K      WM IP+M Y+I++ Y  +++T++   C TF+PL+G+  L
Sbjct: 234 RVAELRQSLYV--GKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPL 407

Query: 821 VE-EHKFMPIVLVNKDHFVGVTLREGHPMPTTAHLWAYNCHPDARKWEEPYKERIEEYAA 879
            +  ++ + I  V+K HFV V L+    +P TA  W+  C+ ++R WE  Y  R++++ +
Sbjct: 408 SQSSYRLISIGFVHKCHFVQVVLKADSVLPPTALQWSRYCNAESRSWETSYVSRMQQFRS 587

Query: 880 YLKQKNGGCSDDIID 894
              QK  G  D I D
Sbjct: 588 LFPQKEIGYVDIIED 632


>BG839904 
          Length = 712

 Score =  118 bits (296), Expect = 1e-26
 Identities = 67/174 (38%), Positives = 100/174 (56%), Gaps = 10/174 (5%)
 Frame = -3

Query: 6   SVDLTKAFTTSQAFESSKDLVNWAKAVGKEHGYVIIIQKSDYGS--------DKRRAVMT 57
           S D + AF T++ F S + ++NWA+ V KE+G+V+II +S+  +        ++R+  + 
Sbjct: 524 SDDCSDAFNTTEVFPSREAMLNWARDVAKENGFVLIILRSETSTTCTRSTRCNQRKTFVI 345

Query: 58  LGCERGGKYK-PSTSVLKRNRTGTKKCNCPFRLRARRSNKDKMWTVLVHSGIHNHDTAEV 116
           +GC+R GKY+ P  + L R  +GT+KC CPF+L+ +   K + W V V  G HNHD  E 
Sbjct: 344 MGCDRSGKYRGPYKNELSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCGCHNHDLXET 165

Query: 117 LQGHSYVGRLNPEEKAMVGEMIEERVKASDILIAIRK-HNPTNLTRIKQIYNEK 169
           L GH Y GRL+ EEK+      +E  +A    I   K      +T IKQIYN +
Sbjct: 164 LVGHPYAGRLSAEEKSFGRCFDKEHDEAXRHSIDH*KIITWVTVTTIKQIYNAR 3


>TC234242 
          Length = 478

 Score =  104 bits (260), Expect = 2e-22
 Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
 Frame = +3

Query: 182 EMQHLMKLLEEHKYAHWSRVQDGTDVVRSLFWAHPDSIHLFNEFPHVVILDSTYKTNRYR 241
           EMQHLMK LE  +Y HW R++D  DVVR +FW HPDS+ L N    V ++DSTY+TNRYR
Sbjct: 15  EMQHLMKFLERDQYIHWHRIKD-EDVVRDIFWCHPDSVKLVNACNLVFLIDSTYRTNRYR 191

Query: 242 IPL-----LEMVGVTSTNLTYSIAFAYMQNEQ 268
           +PL     L+ VG+T T +T+S +FAY++ E+
Sbjct: 192 LPLLDFVVLDFVGMTPTGMTFSASFAYVEGER 287


>BU545334 
          Length = 556

 Score =  102 bits (255), Expect = 6e-22
 Identities = 52/153 (33%), Positives = 86/153 (55%), Gaps = 2/153 (1%)
 Frame = -1

Query: 5   PSVDLTKAFTTSQAFESSKDLVNWAKAVGKEHGYVIIIQKSDY--GSDKRRAVMTLGCER 62
           P VD + AF T Q F +   ++   ++V  E+G+  +I +SD   GS  R + + +GCER
Sbjct: 463 PHVDCSYAFNTXQVFGTRDYVLQ*XRSVAHENGFAAVIMRSDTHTGSRGRSSFVLIGCER 284

Query: 63  GGKYKPSTSVLKRNRTGTKKCNCPFRLRARRSNKDKMWTVLVHSGIHNHDTAEVLQGHSY 122
            G+YK           G++K  CPF+LR +     + W + +  GIHNH+ A+ L  H Y
Sbjct: 283 NGQYKCRNKXXVIRAIGSRKYGCPFKLRGKPVIGGQGWMMKLICGIHNHELAKSLVEHPY 104

Query: 123 VGRLNPEEKAMVGEMIEERVKASDILIAIRKHN 155
            GRL  +EK ++ ++ +  VK  +IL+ +++HN
Sbjct: 103 AGRLTKDEKTIIVDITKSMVKPRNILLILKEHN 5


>TC210791 
          Length = 456

 Score = 59.7 bits (143), Expect(2) = 5e-17
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
 Frame = +2

Query: 330 KKLVKDIETREDIT-DRWNRLMYAANEVEYDKAVGAM----SNTGELWTYIETNWL-PLR 383
           +KL+   + R D+  D W+ +M + NE EY + +  +    S+      Y++  WL P +
Sbjct: 149 RKLIVHPKERYDLVMDAWDSVMNSPNEGEYMQRLTLLEKVCSDFPTFGDYVKNTWLIPHK 328

Query: 384 SKFVKFEIDTCMHMGCTTTNRVEGAHSKLKKLLSDSKGDL 423
            KFV   +D  MH+G TT +R E AH +L+ LL DS GD+
Sbjct: 329 EKFVMAWVDRVMHLGNTTIDRFETAHWRLENLLQDSGGDM 448



 Score = 47.0 bits (110), Expect(2) = 5e-17
 Identities = 19/46 (41%), Positives = 33/46 (71%)
 Frame = +1

Query: 280 KDLIINEDNLPKVFVTDKDQVLMEALETVFPAARCLLCQFHVLKSV 325
           + LI  ++ +P V +T +D  LM+A++ VFP++  LLC+FH+ K+V
Sbjct: 1   RGLIFKDNEMPPVIITVRDIALMDAVQVVFPSSSNLLCRFHISKNV 138


>AW761314 
          Length = 331

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 41/94 (43%), Positives = 57/94 (60%)
 Frame = +1

Query: 107 GIHNHDTAEVLQGHSYVGRLNPEEKAMVGEMIEERVKASDILIAIRKHNPTNLTRIKQIY 166
           G  NH+  + L  H Y  RL  +E  ++  M +  VK  +IL+ +++HN  + T IKQIY
Sbjct: 49  GSDNHELVKSLVRHPYASRLTKDENIIITNMTKSMVKPKNILLTLKEHNVNSYTAIKQIY 228

Query: 167 NEKQAYNRLKRGSLTEMQHLMKLLEEHKYAHWSR 200
           N + AY    RGS T+MQ LMKLLE+ +Y HW R
Sbjct: 229 NARSAYCSSIRGSDTKMQQLMKLLEQDQYIHWHR 330


>BE057981 
          Length = 268

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 39/86 (45%), Positives = 57/86 (65%)
 Frame = +2

Query: 187 MKLLEEHKYAHWSRVQDGTDVVRSLFWAHPDSIHLFNEFPHVVILDSTYKTNRYRIPLLE 246
           MKL E  +Y HW R++D   VVR LFW H D++ L N    V ++++ YKTNRYR+ LL+
Sbjct: 2   MKLFERDQYIHWHRLKDEF-VVRDLFWCHLDAVKLCNACHLVFLINNAYKTNRYRLLLLD 178

Query: 247 MVGVTSTNLTYSIAFAYMQNEQKDEV 272
             GVT   +T+S+ FAY++ E+ + V
Sbjct: 179 FAGVTPARMTFSVGFAYLEGERVNNV 256


>TC218819 similar to UP|O03160 (O03160) NADH dehydrogenase subunit 2, partial
           (5%)
          Length = 732

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
 Frame = +1

Query: 486 IGVGGIYCECVLRRTHGLPCACELMKF----ESVPLLAIHPHWRKLTWDSSDRDM-DPTL 540
           I + G  C C +R THGLPCACEL K+      +PL AIH HWR L +  SD++M +  L
Sbjct: 28  IDIDGSLCGCTIRTTHGLPCACELAKYSRTWHPIPLQAIHVHWRTLNF--SDQEMNNEGL 201

Query: 541 GLSFESEFDKLRTKFEESSHGVRMSIIESLRMITYPETTSMC 582
            L+ + E D L  +F+E  +  ++++   LR + +P+   MC
Sbjct: 202 ELALQREVDALHNQFQELDYAGKITLKAKLRELAFPDAILMC 327


>BI786825 
          Length = 421

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 5/190 (2%)
 Frame = +1

Query: 570 LRMITYPETTSMC-APTKKKTRGRPMGSTNKPKKFAKGCGETSTKRIPCRWETIDKEYPG 628
           LR I YP+  SMC  P K  T+G P  S N+  +        STKR P  W+ +D  +  
Sbjct: 13  LREIAYPDQNSMCHPPAKVNTKGAPKKSMNRNPR--------STKRDPSYWKYVDAFH-- 162

Query: 629 SWRDSNTTPLQEPSPKVRSQKASKASKASKASKVSTASKASKVQSPLIRMVCTKNKKPVS 688
           S ++SN                         S V  +  +S   +P              
Sbjct: 163 SVQNSN-------------------------SSVRHSVSSSYQPNP-------------- 225

Query: 689 SYLRWRYLKQIPGEFHPFVVDFIN----VKGDGHCGYRCVASLKGLAEDDWPLIRRELLT 744
                R +  +  +F  F+ DFI+    VK D +CGYR VASL G+ E+ W L+   LL 
Sbjct: 226 -----RRIMPMLDQFQSFIQDFIDNIVDVKPDRNCGYRSVASLLGMGENSWSLVCNHLLK 390

Query: 745 EIDSDANMYI 754
           E+D  +N YI
Sbjct: 391 ELDKFSNDYI 420


>AW507853 
          Length = 440

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = +1

Query: 643 PKVRSQKASKASKASKASKVSTASKASKVQSPLIRMVCTKNKKPVSSYLRWRYLKQIPGE 702
           P  +SQ+++K   +      +  S  S   S      C++  +P +       L Q    
Sbjct: 28  PMKKSQRSTKRDPSYWEYVDAFHSVQSSNSSVKCSASCSEPPQPTTII---SMLDQFAPF 198

Query: 703 FHPFVVDFINVKGDGHCGYRCVASLKGLAEDDWPLIRRELLTEIDSDANMYINMFGASE- 761
              F+ D ++VK D + GYR +A+  G+ ED WPL+R EL+ E+   ++ Y+N+FG +E 
Sbjct: 199 IQGFIRDVVDVKADDNYGYRSIAAXLGMGEDSWPLLRNELIKELGRWSHEYMNLFGGTER 378

Query: 762 VNQMRLALTV 771
             Q++L+L V
Sbjct: 379 FEQLKLSLLV 408


>TC224081 
          Length = 512

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
 Frame = +1

Query: 514 SVPLLAIHPHWRKLTWDSSDRDMDPTLGLSFESEFDKLRTKFEESSHGVRMSIIESLRMI 573
           S+PL  IH  WR+L++  SD+ +  T  ++   E + +  +FE+     ++ +   L  I
Sbjct: 16  SIPLETIHIFWRRLSF--SDQGLCETQ-VTITEEKETILKRFEQLDVCGKLHLKSKL*EI 186

Query: 574 TYPETTSMCAPTKK-KTRGRPMGSTNKPKKFAKGCGETSTKRIPCRWETIDKEYPGSWRD 632
            YP   SMC P +K KT+G       K +K        STKR P  W+ +D  +  S ++
Sbjct: 187 AYPNMNSMCPPPEKVKTKGASKKPLTKQQK--------STKRYPSYWKYVDVLH--SVQN 336

Query: 633 SNTTPLQEPSPKVRSQKASKASKASKASKVSTASKASKVQSPLIRMVCTKNKKPVSSYLR 692
           SN+                                       L++   + +++P+    R
Sbjct: 337 SNS---------------------------------------LVKHSASSSEEPIQ---R 390

Query: 693 WRYLKQIPGEFHPFVVD----FINVKGDGHCGYRCVASL 727
           W     +  +FHP + D     I VK +G+CGYR +A+L
Sbjct: 391 WNI--PMLDQFHPCIQDSIENIIGVKANGNCGYRAIAAL 501


>AW781991 
          Length = 419

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 24/92 (26%), Positives = 43/92 (46%)
 Frame = +3

Query: 183 MQHLMKLLEEHKYAHWSRVQDGTDVVRSLFWAHPDSIHLFNEFPHVVILDSTYKTNRYRI 242
           + +L ++  E+    ++   D    + ++FWA P +   +  F   V  D+TY++NRYR+
Sbjct: 129 LDYLRQMHAENPNFFYAVQGDEDQSITNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRL 308

Query: 243 PLLEMVGVTSTNLTYSIAFAYMQNEQKDEVVW 274
           P     GV           A++ NE +   VW
Sbjct: 309 PFAFFTGVNHHGQPVLFGCAFLINESEASFVW 404


>TC234876 similar to UP|Q7RNR5 (Q7RNR5) 60S ribosomal protein L27 homolog,
           partial (15%)
          Length = 920

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = -3

Query: 81  KKCNCPFRLRARRSNKDKMWTVLVHSGIHNHDTAEVLQGHSYVGRLNPEEKAMVGEMIEE 140
           +KC C F+L+ +     + W   +    HNH  A++L  H YV RL   EK ++G+MI+ 
Sbjct: 600 RKCGCLFKLQVKPVLGGEGWMKKLIRESHNHALAKLLVRHPYVDRLTINEKIIIGDMIKL 421

Query: 141 RVKASDILIAIRKHNPTNLTRIKQIYNEKQAYNRL 175
            +K+ +  I   K  P        +YN K + +++
Sbjct: 420 IIKSKNCGIEGAKCYP--------LYNNKASNSKI 340


>BM892478 
          Length = 429

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 26/101 (25%), Positives = 45/101 (43%)
 Frame = +3

Query: 210 SLFWAHPDSIHLFNEFPHVVILDSTYKTNRYRIPLLEMVGVTSTNLTYSIAFAYMQNEQK 269
           ++FWA   S +  + F  V++LD++Y+   Y +P    VGV        +  A + +E +
Sbjct: 111 NIFWADGRSRYSCSHFGDVLVLDTSYRKTVYLVPFATFVGVNHHKQPVLLGCALIADESE 290

Query: 270 DEVVWAVNRLKDLIINEDNLPKVFVTDKDQVLMEALETVFP 310
           +   W       L      LP   + D+D  +  A+  VFP
Sbjct: 291 ESFTWLFQTW--LRAMSGRLPLTVIADQDIAIQRAIAKVFP 407


>AI736706 
          Length = 426

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 6   SVDLTKAFTTSQAFESSKDLVNWAKAVGKEHGYVIIIQKSDYGSDKRRAVMTLGCER 62
           SVD + AF T++ F S + ++NWA+ V KE+G+V+II +S+  +   +   +  C +
Sbjct: 237 SVDCSDAFNTTEVFPSREAMLNWARDVAKENGFVLIILRSETSTRSTKYTRSTRCNQ 407


>BG882562 
          Length = 416

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/101 (24%), Positives = 44/101 (42%)
 Frame = +3

Query: 208 VRSLFWAHPDSIHLFNEFPHVVILDSTYKTNRYRIPLLEMVGVTSTNLTYSIAFAYMQNE 267
           +R++FW    S   ++ F  VV  DST  +N Y IPL+  VGV     +  +    + +E
Sbjct: 120 LRNVFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVAFVGVNHHGKSVLLGCGLLADE 299

Query: 268 QKDEVVWAVNRLKDLIINEDNLPKVFVTDKDQVLMEALETV 308
             +  +W       L       P+  +T+  + +  A+  V
Sbjct: 300 TFETYIWLFRAW--LTCMTGRPPQTIITNXCKAMQSAIAEV 416


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,354,830
Number of Sequences: 63676
Number of extensions: 596621
Number of successful extensions: 3204
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3186
length of query: 898
length of database: 12,639,632
effective HSP length: 106
effective length of query: 792
effective length of database: 5,889,976
effective search space: 4664860992
effective search space used: 4664860992
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)