TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0544.8
         (1753 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE474477                                                              138  2e-32
TC212810 similar to UP|Q9W1I6 (Q9W1I6) CG18426-PA (LD12035p), pa...    36  0.17
TC221718                                                               35  0.29
BE473768                                                               34  0.64
TC205389 similar to GB|AAL16135.1|16226325|AF428303 AT3g05910/F2...    33  0.84
TC225702 UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), partial (98%)            33  1.1
TC225553 weakly similar to UP|Q06106 (Q06106) Ypr112cp, partial ...    32  3.2
TC205388 similar to UP|Q8L7Z5 (Q8L7Z5) At1g57590/T8L23_6, partia...    31  5.4
TC227740 similar to UP|Q8LBD3 (Q8LBD3) Cytochrome-b5 reductase-l...    30  7.1
TC203960 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-...    30  7.1
TC232133 weakly similar to UP|Q9V5S5 (Q9V5S5) CG33473-PB (Transc...    30  7.1
TC227793                                                               30  7.1
TC233522                                                               30  7.1
TC227566 similar to UP|Q9MA20 (Q9MA20) T5E21.13, partial (7%)          30  7.1
TC221950 similar to UP|Q9FL07 (Q9FL07) RING zinc finger protein-...    30  9.3
TC214884 similar to UP|P93169 (P93169) Early light-induced prote...    30  9.3
TC228002                                                               30  9.3
TC228095 similar to GB|AAO42974.1|28416887|BT004728 At3g53470 {A...    30  9.3
TC214824 UP|Q9MAZ9 (Q9MAZ9) Nonclathrin coat protein zeta1-COP, ...    30  9.3

>BE474477 
          Length = 354

 Score =  138 bits (348), Expect = 2e-32
 Identities = 62/115 (53%), Positives = 84/115 (72%), Gaps = 2/115 (1%)
 Frame = +3

Query: 1477 LFETTLCEIISWETLEARTSLDPKGYLSTYNEKDIQLICCQSDASTLWLVPPIVQARFMK 1536
            L++TTLCE + W+ L +  + DP GYL  YN+ DIQLICCQ+DASTLWLVP +V+ R ++
Sbjct: 9    LYQTTLCERLQWDLLNSNINPDPYGYLGAYNKNDIQLICCQADASTLWLVPLVVRTRLIQ 188

Query: 1537 SLSWNMDLAF--SWEFTRDRPRGKEVVKYELTIQEQDLPKSSEVTEVFNGTSNSF 1589
            SL WN+D+    +W  +RDRP+GKE+VKYE  +  Q LP  S+V +V NG+ NSF
Sbjct: 189  SLEWNIDMEIFSTWILSRDRPKGKEIVKYEKAVDPQYLPTRSDVQKVLNGSMNSF 353


>TC212810 similar to UP|Q9W1I6 (Q9W1I6) CG18426-PA (LD12035p), partial (11%)
          Length = 407

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 20/70 (28%), Positives = 35/70 (49%)
 Frame = -1

Query: 236 PNETTACTPQNKQAETSTSATIKRLARSRSCPTVNSALSQGTDSGIEGDSTKKLRQLHFW 295
           P +TTA    ++Q  +S S  ++  A  RS         +   S +E  S++K   + FW
Sbjct: 284 PIKTTALNSASQQRNSSRS--LRSHAMERSASPEEEVEEEEESSEVEDKSSEKRSPMCFW 111

Query: 296 ESSKDSLKWN 305
           +SS+ S+ W+
Sbjct: 110 KSSRSSISWS 81


>TC221718 
          Length = 860

 Score = 35.0 bits (79), Expect = 0.29
 Identities = 15/29 (51%), Positives = 19/29 (64%)
 Frame = -3

Query: 889 VRHIWSRMRSNNEVVCYCCFILIYLWNFS 917
           +R +WSR   NN ++  CCFIL  LWN S
Sbjct: 102 MRRVWSRREINNYIIL-CCFILQSLWNAS 19


>BE473768 
          Length = 431

 Score = 33.9 bits (76), Expect = 0.64
 Identities = 15/47 (31%), Positives = 28/47 (58%)
 Frame = -3

Query: 1255 FVLVLMVVFFLIVLDRIIYLCSFATAKVIFYLFSLVLFTYSVTKYAW 1301
            F + +++ F L    R+  LC ++ A+ IF++F ++L  +S T Y W
Sbjct: 147  FSVYILLYFCLYFCSRLSLLCLYS-ARFIFFIFLILLLCFSYTYYPW 10


>TC205389 similar to GB|AAL16135.1|16226325|AF428303 AT3g05910/F2O10_3
           {Arabidopsis thaliana;} , partial (16%)
          Length = 538

 Score = 33.5 bits (75), Expect = 0.84
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 905 YCCFILIYLWNFSLLSVVYLAALFLYALCQN-TGPSYIFWVLILIYTEVCILLQYLYQI 962
           YC F    +W F +LS+  +   F+Y    N  G  Y +W+ + +   VC+L+ +  +I
Sbjct: 338 YCLF----MWQFDILSISSV*LPFVYLTFINCNGNKYHYWLRLQLIRSVCLLISHFNKI 502


>TC225702 UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), partial (98%)
          Length = 1431

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 1255 FVLVLMVVFFLIVLDRIIYLCSFATAKVIFYLFSLVLF 1292
            F+ +L V FFL +L    +L + A A   F+LF +V+F
Sbjct: 788  FLFLLAVAFFLFLLTTAFFLLAAAAAAAAFFLFLIVVF 675


>TC225553 weakly similar to UP|Q06106 (Q06106) Ypr112cp, partial (6%)
          Length = 1371

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 23/81 (28%), Positives = 41/81 (50%)
 Frame = +1

Query: 286  TKKLRQLHFWESSKDSLKWNRKRLLFLRKERLEMQKTALKVSLKFWIENMFTLFGLEINM 345
            +KK +Q+ F +  K  +K+ R    +  K+      + L++S KFW  N    F + INM
Sbjct: 1111 SKKRKQVDFLDEGK--MKFGRMAD*YSSKDL----NSILRMSWKFWDHNFVIGFQVYINM 1272

Query: 346  IALLLASFAVLNAISLLYIAS 366
                L+S   + ++SL + +S
Sbjct: 1273 PCCFLSSSVKITSLSLGFYSS 1335


>TC205388 similar to UP|Q8L7Z5 (Q8L7Z5) At1g57590/T8L23_6, partial (86%)
          Length = 1433

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 905  YCCFILIYLWNFSLLSVVYLAALFLYALCQN-TGPSYIFWVLILIYTEVCILL 956
            YC F    +W F +LS+  L   F+Y    N  G  Y  W+ + ++  +C+L+
Sbjct: 1279 YCLF----MW*FDILSI*SLLLPFVYLTFINCNGNKYHSWLRLQLFRSICLLI 1425


>TC227740 similar to UP|Q8LBD3 (Q8LBD3) Cytochrome-b5 reductase-like protein,
            partial (78%)
          Length = 1368

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 12/32 (37%), Positives = 18/32 (55%)
 Frame = +2

Query: 1066 CRYWKSLTWGAETPPYFVQLSMEVNLWPKEGI 1097
            C+ W S+      PPYF+  S+ VN  P +G+
Sbjct: 1259 CQQWASVGVNLLLPPYFLTFSLRVNYSPLKGL 1354


>TC203960 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha),
           partial (31%)
          Length = 699

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 3/66 (4%)
 Frame = +1

Query: 891 HIWSRMRSNNEVVCYCCFILIYLWNFSLLSVVY---LAALFLYALCQNTGPSYIFWVLIL 947
           +I+ +     +    CCF L+   N + L VV+   L  LFLY LC N G       L+ 
Sbjct: 481 YIFVKRSEFQDFAALCCFGLL---NVNFLFVVFNFWLGLLFLYNLCSNFG-------LVC 630

Query: 948 IYTEVC 953
            Y  +C
Sbjct: 631 FYYNLC 648


>TC232133 weakly similar to UP|Q9V5S5 (Q9V5S5) CG33473-PB (Transcription
           factor DKLF) (HL07808p), partial (5%)
          Length = 461

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = +1

Query: 817 QSLGNMAVNNLVNYLKIEREG--QEP---TDDSSEDEEYYEIENQNSGAE 861
           +S+G +     V+Y + E+ G  ++P   +D   +DEEY E+E++N G E
Sbjct: 304 RSIGAIKSYKDVSYFQTEQVGSWEDPDTGSDSECDDEEYEEVEDENFGFE 453


>TC227793 
          Length = 444

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = +3

Query: 895 RMRSNNEVVCYCCFILIYLWNFSLLSVVYLAALFLYALCQNTGPSYIFWVLI-----LIY 949
           RM S   + C C F  I    F +L +++L   F+          YI+ +L+     +IY
Sbjct: 210 RMASQELLACQCGFYCITF--FFILDILFLFFNFV--------SWYIYLILV*NYCVIIY 359

Query: 950 TEVCILLQYLYQIIIQHTEFEFP 972
               IL  +LY+II  + E  FP
Sbjct: 360 IYYMILSFHLYEIIQVNKEIGFP 428


>TC233522 
          Length = 800

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 894 SRMRSNNEVVCYCCFILIYLWN----FSLLSVVYLAALFLYALC 933
           S M + +EV C C ++++ LWN     +  S VY  +L+L ++C
Sbjct: 492 SMMMNISEVECVCWYVVLCLWNKI*ISTASSYVYERSLWLCSIC 623


>TC227566 similar to UP|Q9MA20 (Q9MA20) T5E21.13, partial (7%)
          Length = 819

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 19/47 (40%), Positives = 24/47 (50%)
 Frame = +3

Query: 593 INELVGFQKYDYGFRITSRSALVEIIIYMLVSLQSYMFSFPEFDYVS 639
           + E  G ++  Y F   SR  L  +  Y   S+ SYM  FPEF YVS
Sbjct: 636 LRERGGRKR*AYCFHFRSRRLL*SLPYYKAYSIDSYMMLFPEF-YVS 773


>TC221950 similar to UP|Q9FL07 (Q9FL07) RING zinc finger protein-like,
           partial (11%)
          Length = 550

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 23/59 (38%), Positives = 27/59 (44%), Gaps = 3/59 (5%)
 Frame = +2

Query: 79  EVGPFPFTRRLLVRHTEK---ILFLALFYASLSPISAFGFLYLLGLINCSRLPKSSQIP 134
           EVG FPF     +  TEK   +L L +F+AS SP S   F            P SS IP
Sbjct: 311 EVGNFPFFGHNQILDTEKLSPLLTLLIFFASTSPSSTETF------------PSSSSIP 451


>TC214884 similar to UP|P93169 (P93169) Early light-induced protein, partial
            (98%)
          Length = 2021

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 15/49 (30%), Positives = 26/49 (52%), Gaps = 2/49 (4%)
 Frame = -3

Query: 1396 IHASLFLVKCDVDLNRASHQQGQKQTKMTKF--CNGICLFFVLMCVIWA 1442
            +HA +FL+ C + L+R           + +F    G C FF+++ +IWA
Sbjct: 216  LHAYIFLLNCIISLSRCCVMS----LSLFQFV*AMGRCFFFIILILIWA 82


>TC228002 
          Length = 805

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 17/64 (26%), Positives = 34/64 (52%)
 Frame = +1

Query: 654 QEKKAAWKTAQLRHIRKAEELKHLRSLQVEKMKSEMLNLQNQLHSMSTDANYSNASLKND 713
           Q  ++ W T    +  +  ELK   +++V+++++E  +L+  L     D     ASL+N 
Sbjct: 316 QSWRSKWDTQVKVYRDELSELKKTLNVEVDQLRAEFQDLRTTLQQQQEDV---TASLRNL 486

Query: 714 GLRE 717
           GL++
Sbjct: 487 GLQD 498


>TC228095 similar to GB|AAO42974.1|28416887|BT004728 At3g53470 {Arabidopsis
           thaliana;} , partial (50%)
          Length = 918

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 294 FWESSKDSLKWNRKRLLFLRKERLEMQKTALKVSLKFWIENMFTLFGLEINMIALLL 350
           F + S   + WN +R  F   E ++  K   + +L FW    FTL G  I +  LLL
Sbjct: 286 FSKFSDKYVSWNPRRSEFPLSEEVDPIKRTERSNLSFWNSPTFTLGGAIIIVTFLLL 456


>TC214824 UP|Q9MAZ9 (Q9MAZ9) Nonclathrin coat protein zeta1-COP, partial (68%)
          Length = 1686

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 19/80 (23%), Positives = 41/80 (50%), Gaps = 3/80 (3%)
 Frame = -3

Query: 332  IENMFTLFGLEINMIALLLASFAVLNAISLLYIASLAACVLLH---RLLIKKLWPIFVFL 388
            +  +  +  LEI M+A      A  +++  LY+AS  +C + H   R L+   +  F F+
Sbjct: 1357 VARLLCIESLEIPMLAESCGEGATTHSVLCLYVAS--SCRIRHEGERELVSSFFFFFFFM 1184

Query: 389  FASVVTVEYLAIWMRLTFMN 408
             + ++  E ++ +  +T++N
Sbjct: 1183 SSQILIDERISRYWIVTYLN 1124


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.325    0.139    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,979,105
Number of Sequences: 63676
Number of extensions: 1317497
Number of successful extensions: 10473
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 10209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10465
length of query: 1753
length of database: 12,639,632
effective HSP length: 111
effective length of query: 1642
effective length of database: 5,571,596
effective search space: 9148560632
effective search space used: 9148560632
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)