BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0544.6
(285 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220290 similar to UP|Q8CFL1 (Q8CFL1) Stxbp4 protein, partial (4%) 85 4e-17
BU550052 similar to GP|7291176|gb|A CG15295-PA {Drosophila melan... 72 3e-13
BE800333 65 5e-11
CK606020 59 2e-09
BU548803 58 6e-09
TC231640 homologue to UP|Q918P0 (Q918P0) Latency associated anti... 57 1e-08
TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1... 55 3e-08
TC213554 weakly similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protei... 52 3e-07
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 48 4e-06
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 48 6e-06
TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), ... 47 8e-06
BU927182 47 1e-05
TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 47 1e-05
CF921229 47 1e-05
BF068812 47 1e-05
TC222732 similar to UP|Q9LM48 (Q9LM48) F2E2.18, partial (24%) 46 2e-05
TC226274 similar to UP|Q8L5W5 (Q8L5W5) VERNALIZATION INDEPENDENC... 45 3e-05
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 45 4e-05
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 45 4e-05
CO981458 43 2e-04
>TC220290 similar to UP|Q8CFL1 (Q8CFL1) Stxbp4 protein, partial (4%)
Length = 800
Score = 84.7 bits (208), Expect = 4e-17
Identities = 51/146 (34%), Positives = 73/146 (49%), Gaps = 21/146 (14%)
Frame = -3
Query: 75 CTESLGFESSDEIHNKNVGDGDGDGGDEIWRRTMMRAEGRGNRRKLR------------- 121
CTE LGFESSD++ + + + +G +E W + E N + L
Sbjct: 435 CTEGLGFESSDDVEDSK--NNEVNGSNECWENDVREKECYENTKCLGLEDWCEWRTRSSI 262
Query: 122 --------SFPPPLSSLNRNGKPSFFLRPVRKDGRLELTEVRIHRAEILHASRHDGRLTL 173
+PPP+SS+ R+GKP R +GR L EVR E LHA R DGRL L
Sbjct: 261 RVSNNNGVEYPPPISSIGRSGKPCVSFMFYRDNGRFVLKEVRTPIQEFLHAHREDGRLKL 82
Query: 174 HLIPDQVSLEEEEEEIEEEDDQDEIE 199
H + + +EE+EE +++D DE+E
Sbjct: 81 HFVQPE---DEEKEEDGDDEDYDEVE 13
>BU550052 similar to GP|7291176|gb|A CG15295-PA {Drosophila melanogaster},
partial (4%)
Length = 703
Score = 72.0 bits (175), Expect = 3e-13
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Frame = -1
Query: 117 RRKLRSFPPPLSSLNRNGKPSFFLRPVRKDGRLELTEVRIH-RAEILHASRHDGRLTLHL 175
+ K ++FPPPL+++ R G S +RP R+DGRL + ++ + HA R GRL L
Sbjct: 571 KAKTQNFPPPLTTI-RGGSESLRVRPHREDGRLVIEVTKVPPSSSCFHAERSHGRLRLCF 395
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIE----------EDQEQEEEELVEEEEELEEEVALDDD 225
+ + E E EEEDD +E E E Q ++ EE+EE E+E +
Sbjct: 394 LTNHTPSFETEAAAEEEDDVEEKEPFVNDKGFENEIGGQVKDTTKEEQEETEDETG---E 224
Query: 226 EKEEEEEEIEC-------------EREERVAEWGFHEGY 251
E+E++EE + C ER R E G HE Y
Sbjct: 223 EEEQDEECVACGYVKSDVIIMEKYERLRRCKEGGDHENY 107
>BE800333
Length = 342
Score = 64.7 bits (156), Expect = 5e-11
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Frame = -3
Query: 75 CTESLGFESSDEIHNKNVGDGDGDG------------GDEIWRRTMMRAEGRGNRRKLRS 122
CTE LGFESSD++ ++ + + D G E W R+ R N +K
Sbjct: 325 CTEGLGFESSDDVEDRKNNEVNSDERENECYENKKSLGLEDWCEWRTRSSIRVNNKKKND 146
Query: 123 ---FPPPLSSLNRNGKPSFFLRPVRKDGRLELTEVRIHRAEILHASR 166
+PPP+SS+ R+GKP R +GR L EVRI E LHA R
Sbjct: 145 GVEYPPPISSIGRSGKPCVSFMSYRDNGRFVLKEVRIPIQEFLHAHR 5
>CK606020
Length = 340
Score = 59.3 bits (142), Expect = 2e-09
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
SL+EEEEE EEE+ EE++E+EEEE+ EEEEE EEEV + +E+E E EE+E
Sbjct: 190 SLDEEEEEEEEEE-----EEEEEEEEEEIEEEEEEEEEEVEEEVEEEEVEGEEVE 339
Score = 55.5 bits (132), Expect = 3e-08
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = +1
Query: 163 HASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVAL 222
H+ R + +PD S ++EI+ D++E EE++E+EEEE EEEEE+EEE
Sbjct: 109 HSLRFQIQFNPMSLPD--SPVANDDEIDPSLDEEEEEEEEEEEEEE-EEEEEEIEEEEEE 279
Query: 223 DDDEKEEEEEEIECEREE 240
+++E EEE EE E E EE
Sbjct: 280 EEEEVEEEVEEEEVEGEE 333
Score = 51.2 bits (121), Expect = 5e-07
Identities = 28/52 (53%), Positives = 37/52 (70%)
Frame = +1
Query: 193 DDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
DD+ + D+E+EEEE EEEEE EEE ++++E EEEEEE+E E EE E
Sbjct: 172 DDEIDPSLDEEEEEEEEEEEEEEEEEEEEIEEEE-EEEEEEVEEEVEEEEVE 324
Score = 27.7 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 210 VEEEEELEEEVALDDDEKEEEEEEIECEREERVAEWGFHEGYRRCHEMVNQ 260
V ++E++ + +++E+EEEEEE E E EE E E E V +
Sbjct: 163 VANDDEIDPSLD-EEEEEEEEEEEEEEEEEEEEIEEEEEEEEEEVEEEVEE 312
>BU548803
Length = 715
Score = 57.8 bits (138), Expect = 6e-09
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = -2
Query: 122 SFPPPLSSLNRNGKPSFFLRPVRKDGRLELTEVRIHRAE-ILHASRHDGRLTLHLIPDQV 180
+ PPPL+++ +RP R+ GRL L V H R DGRL L L+
Sbjct: 588 NLPPPLTTITDXX--GVHVRPHREGGRLVLEAVASPSPRPYFHIERGDGRLRLCLLESFS 415
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEEL--EEEVALDDDEKEEEE 231
+ + ++E + E+ DE +E++ + E+ EEEE+ EE++A +E+EEEE
Sbjct: 414 ASDSDDEVCDAEEGVDEQQEEENESEKNRGEEEEKECGEEDIATGAEEEEEEE 256
>TC231640 homologue to UP|Q918P0 (Q918P0) Latency associated antigen, partial
(7%)
Length = 466
Score = 56.6 bits (135), Expect = 1e-08
Identities = 29/57 (50%), Positives = 42/57 (72%), Gaps = 2/57 (3%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEE--VALDDDEKEEEEEEIECE 237
EEEE+E EEE++++E EE++E+EEEE EEEEE E V +D+D+ + EE +CE
Sbjct: 28 EEEEKEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEGNVLVIIDEDKHDTEELNKKCE 198
Score = 47.0 bits (110), Expect = 1e-05
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +1
Query: 196 DEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
D + D ++EEEE EEEEE EEE +++E+EEEE+E E E E V
Sbjct: 1 DNVLSDTQEEEEEKEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEGNV 141
>TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(70%)
Length = 2075
Score = 55.5 bits (132), Expect = 3e-08
Identities = 25/53 (47%), Positives = 42/53 (79%)
Frame = +2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
EE EEE+EEE+ ++E+EE++E+EEE+ EEEEE EEE D ++++++++ E
Sbjct: 128 EEVEEEVEEEEVEEEVEEEEEEEEEDEEEEEEEEEEEEENDVVKQQQQQQQDE 286
Score = 53.9 bits (128), Expect = 8e-08
Identities = 25/57 (43%), Positives = 43/57 (74%)
Frame = +2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEI 234
++V E EEEE+EEE +++E EE++++EEEE EEEEE E +V +++++E++I
Sbjct: 128 EEVEEEVEEEEVEEEVEEEEEEEEEDEEEEEEEEEEEE-ENDVVKQQQQQQQDEDDI 295
Score = 53.5 bits (127), Expect = 1e-07
Identities = 26/58 (44%), Positives = 43/58 (73%)
Frame = +2
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREER 241
+E EE+EEE +++E+EE+ E+EEEE E+EEE EEE E+EEEE ++ +++++
Sbjct: 119 QEYEEVEEEVEEEEVEEEVEEEEEEEEEDEEEEEEE------EEEEEENDVVKQQQQQ 274
Score = 49.7 bits (117), Expect = 2e-06
Identities = 26/55 (47%), Positives = 38/55 (68%)
Frame = +2
Query: 185 EEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECERE 239
++++ + E+ E EE +E+ EEE VEEE E EEE +D+E+EEEEEE E E +
Sbjct: 86 KQQQPKPENPPQEYEEVEEEVEEEEVEEEVEEEEEEEEEDEEEEEEEEEEEEEND 250
Score = 40.4 bits (93), Expect = 0.001
Identities = 16/44 (36%), Positives = 35/44 (79%)
Frame = +2
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEE 219
+ ++V EEEEEE ED+++E EE++E+EE ++V+++++ +++
Sbjct: 161 VEEEVEEEEEEEE---EDEEEEEEEEEEEEENDVVKQQQQQQQD 283
Score = 34.7 bits (78), Expect = 0.051
Identities = 14/54 (25%), Positives = 35/54 (63%)
Frame = +2
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEE 229
+ ++ EEE+EE EEE++++E E D +++++ ++E+++ L+ K++
Sbjct: 173 VEEEEEEEEEDEEEEEEEEEEEEENDVVKQQQQQQQDEDDIPISKLLEPLGKDQ 334
>TC213554 weakly similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1,
partial (18%)
Length = 451
Score = 52.0 bits (123), Expect = 3e-07
Identities = 21/51 (41%), Positives = 40/51 (78%)
Frame = +2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
EE EEE+EEE+ ++E+EE++E+EE+E EEEEE +++ +++++E++
Sbjct: 194 EEVEEEVEEEEVEEEVEEEEEEEEDEEDEEEEEEDQKDQYQHQQQQQDEDD 346
Score = 52.0 bits (123), Expect = 3e-07
Identities = 25/65 (38%), Positives = 43/65 (65%)
Frame = +2
Query: 171 LTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
L H + + +E EEE+EEE +++E+EE+ E+EEEE +EE+E EEE D + ++
Sbjct: 146 LKQHQPKPENAAQEYEEEVEEEVEEEEVEEEVEEEEEEEEDEEDEEEEEEDQKDQYQHQQ 325
Query: 231 EEEIE 235
+++ E
Sbjct: 326 QQQDE 340
Score = 48.9 bits (115), Expect = 3e-06
Identities = 20/50 (40%), Positives = 37/50 (74%)
Frame = +2
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDD 225
+ ++V EE EEE+EEE++++E EED+E+EEE+ ++ + +++ DDD
Sbjct: 200 VEEEVEEEEVEEEVEEEEEEEEDEEDEEEEEEDQKDQYQHQQQQQDEDDD 349
Score = 45.8 bits (107), Expect = 2e-05
Identities = 21/57 (36%), Positives = 40/57 (69%)
Frame = +2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEI 234
++V E EEEE+EEE +++E EE+ E++EE EEEE+ +++ +++E+++ I
Sbjct: 194 EEVEEEVEEEEVEEEVEEEEEEEEDEEDEE---EEEEDQKDQYQHQQQQQDEDDDPI 355
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/47 (42%), Positives = 36/47 (76%)
Frame = +2
Query: 195 QDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREER 241
++ +E +E+ EEE+ EEEE+EEEV +++E+E+EE+E E E +++
Sbjct: 170 ENAAQEYEEEVEEEV--EEEEVEEEVEEEEEEEEDEEDEEEEEEDQK 304
Score = 35.4 bits (80), Expect = 0.030
Identities = 22/45 (48%), Positives = 29/45 (63%)
Frame = +2
Query: 200 EDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
E+ QE EE VEEE E EE ++++ +EEEEEE + E EE E
Sbjct: 170 ENAAQEYEEEVEEEVEEEE---VEEEVEEEEEEEEDEEDEEEEEE 295
Score = 32.3 bits (72), Expect = 0.25
Identities = 15/41 (36%), Positives = 28/41 (67%)
Frame = +2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALD 223
E+EE+E EEE+DQ + + Q+Q+++E + +L E ++ D
Sbjct: 263 EDEEDEEEEEEDQKDQYQHQQQQQDEDDDPISKLLEPLSKD 385
Score = 31.6 bits (70), Expect = 0.43
Identities = 20/47 (42%), Positives = 27/47 (56%)
Frame = +2
Query: 198 IEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
+++ Q + E E EEE+EEEV +E+E EEE E E EE E
Sbjct: 146 LKQHQPKPENAAQEYEEEVEEEV----EEEEVEEEVEEEEEEEEDEE 274
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 48.1 bits (113), Expect = 4e-06
Identities = 22/51 (43%), Positives = 37/51 (72%)
Frame = -1
Query: 185 EEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
EE+E E+ DDQD+ E+D + +++E E EE +E+ A D++ +E+EE+E E
Sbjct: 418 EEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEE 266
Score = 47.4 bits (111), Expect = 8e-06
Identities = 18/59 (30%), Positives = 43/59 (72%)
Frame = -1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREER 241
+E+E+ +++DD+D+ ++D ++E+E EE+E+ E+ ++DE++EEEE ++ ++ +
Sbjct: 412 DEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEALQPPKKRK 236
Score = 45.4 bits (106), Expect = 3e-05
Identities = 19/51 (37%), Positives = 38/51 (74%)
Frame = -1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
E+E+E+ +++DD ++ ++D + EE+E EEE+E E +++++E+EEEE
Sbjct: 415 EDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEE 263
Score = 42.0 bits (97), Expect = 3e-04
Identities = 20/53 (37%), Positives = 36/53 (67%)
Frame = -1
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
DQ E+++++ ++E+D+ EED++ E+E EE+EE EEE AL +K ++
Sbjct: 391 DQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEALQPPKKRKK 233
Score = 37.4 bits (85), Expect = 0.008
Identities = 16/49 (32%), Positives = 33/49 (66%)
Frame = -1
Query: 192 EDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREE 240
E+D+DE +DQ+ +E++ ++++E +E +D++ E+EE E E +E
Sbjct: 418 EEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDE 272
Score = 28.1 bits (61), Expect = 4.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 260 QHHHHHHNVHGNHHHNHIRM 279
+HH H H+ H + H+H+R+
Sbjct: 349 RHHRHRHHPHHHLDHHHLRL 408
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 47.8 bits (112), Expect = 6e-06
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -3
Query: 185 EEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
EE+E E+ DDQD+ +ED + ++EE +E E E+E +D+E EE+EE+ E
Sbjct: 451 EEDEDEDGDDQDDDDEDDDDDDEE--DEAGEEEDEDGAEDEENEEDEEDEE 305
Score = 45.1 bits (105), Expect = 4e-05
Identities = 18/48 (37%), Positives = 36/48 (74%)
Frame = -3
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
E+E+E+ +++DD DE ++D ++E+E EE+E+ E+ ++DE++EE
Sbjct: 448 EDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEE 305
Score = 38.9 bits (89), Expect = 0.003
Identities = 16/54 (29%), Positives = 35/54 (64%)
Frame = -3
Query: 190 EEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVA 243
EE ++DE E+ +Q++++ +++++ E+E ++DE E+EE E + E+ A
Sbjct: 463 EENGEEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEEA 302
Score = 29.3 bits (64), Expect = 2.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 258 VNQHHHHHHNVHGNHHHNHI 277
+ HH H H H +HHH H+
Sbjct: 382 LRHHHRHPHRRHLDHHHLHL 441
>TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), partial (7%)
Length = 1040
Score = 47.4 bits (111), Expect = 8e-06
Identities = 23/75 (30%), Positives = 52/75 (68%), Gaps = 9/75 (12%)
Frame = +2
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELE-----EEVALDDDEKE----E 229
+V + EE++E+E +++ E+E +E++E E+++E++E+E +EV + +++KE E
Sbjct: 809 EVEVAEEKKEVEGTEEKKEVEVAEEKKETEVIKEKKEVEVTEEKKEVEVTEEKKEAEVIE 988
Query: 230 EEEEIECEREERVAE 244
E++E++ E++ AE
Sbjct: 989 EKKEVDATEEKKEAE 1033
Score = 45.1 bits (105), Expect = 4e-05
Identities = 21/66 (31%), Positives = 42/66 (62%)
Frame = +2
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECER 238
+ + EE++E+E +++ E+E +E++E E+ EE++E E + E EE++E+E
Sbjct: 782 EAEVTEEKKEVEVAEEKKEVEGTEEKKEVEVAEEKKETEVIKEKKEVEVTEEKKEVEVTE 961
Query: 239 EERVAE 244
E++ AE
Sbjct: 962 EKKEAE 979
Score = 44.3 bits (103), Expect = 6e-05
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 9/73 (12%)
Frame = +2
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELE-----EEVALDDDEKE----EEE 231
+LE++EEE+ EE + E+E +E++E E+ EE++E E +EV + +++KE EE+
Sbjct: 686 ALEKKEEEVSEE--KKEVEVTEEKKEAEVTEEKKEAEVTEEKKEVEVAEEKKEVEGTEEK 859
Query: 232 EEIECEREERVAE 244
+E+E E++ E
Sbjct: 860 KEVEVAEEKKETE 898
Score = 42.0 bits (97), Expect = 3e-04
Identities = 23/75 (30%), Positives = 48/75 (63%), Gaps = 9/75 (12%)
Frame = +2
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELE-----EEVALDDDEKE----E 229
+V + EE++E E +++ E E +E++E E+ EE++E+E +EV + +++KE +
Sbjct: 728 EVEVTEEKKEAEVTEEKKEAEVTEEKKEVEVAEEKKEVEGTEEKKEVEVAEEKKETEVIK 907
Query: 230 EEEEIECEREERVAE 244
E++E+E E++ E
Sbjct: 908 EKKEVEVTEEKKEVE 952
>BU927182
Length = 447
Score = 47.0 bits (110), Expect = 1e-05
Identities = 26/88 (29%), Positives = 46/88 (51%)
Frame = +3
Query: 157 HRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEEL 216
H E + D R + + E+E E + + + E+E+D+ + E+E+ ++ E
Sbjct: 87 HEGERVRVREKDRREREKEVEKERREREKEVEKDRREREKEVEKDRREREKEVEKDRREK 266
Query: 217 EEEVALDDDEKEEEEEEIECEREERVAE 244
E+EV D EKE+E E+ ERE+ V +
Sbjct: 267 EKEVEKDRREKEKEVEKDRREREKEVVK 350
>TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (5%)
Length = 858
Score = 46.6 bits (109), Expect = 1e-05
Identities = 48/235 (20%), Positives = 103/235 (43%)
Frame = +1
Query: 10 HSLFTFTTVAAAATTATTTTTTASISELGIITSTNGVDSAPNVLESAKLKPDPPPDWIDE 69
HS+F+ ++ ++ A AS E+ + + N P+ E+ ++ + +++
Sbjct: 58 HSVFSSIFISIQSSMAEEPQKPASAEEVVAVPAEN----PPSEAEAENIEAEKAQSGVED 225
Query: 70 TGLVSCTESLGFESSDEIHNKNVGDGDGDGGDEIWRRTMMRAEGRGNRRKLRSFPPPLSS 129
++S+ F+ + VGD + + E N P P
Sbjct: 226 ----KISQSVSFKEETNV----VGDLPEAQKKALDELKKLVQEALNNHELTAPKPEP--- 372
Query: 130 LNRNGKPSFFLRPVRKDGRLELTEVRIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEI 189
KP+ K +E+TE + AE++ + + + ++ + EE++E
Sbjct: 373 --EKKKPA-----AEKKEEVEVTEGK-KEAEVIEEKKE---VEVTEEKKEIEVTEEKKEA 519
Query: 190 EEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
E +++ E+E +E++E E+ EE++E E + + E EE++E+E E++ AE
Sbjct: 520 EVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKKEAE 684
Score = 40.8 bits (94), Expect = 7e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +1
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEE 231
+V + EE++E+E + + E+E +E++E E+ EE++E+E EV +EK+E E
Sbjct: 706 EVEVTEEKKEVEVTEGKKEVEVIEEKKETEVTEEKKEVEVEVR---EEKKESE 855
Score = 38.9 bits (89), Expect = 0.003
Identities = 29/94 (30%), Positives = 56/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 149 LELTEVRIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEE 208
+E+TE + AE+ + +G +T +V+ E++E E+ E+ + E+E +E++E E
Sbjct: 571 IEVTEEK-KEAEVKEEKK-EGEVTEEKKEVEVTEEKKEAEVIVEEKK-EVEVTEEKKEVE 741
Query: 209 LVEEEEELEEEVALDDDEKEEEEEEIECE-REER 241
+ E ++E+E + E EE++E+E E REE+
Sbjct: 742 VTEGKKEVEVIEEKKETEVTEEKKEVEVEVREEK 843
Score = 38.9 bits (89), Expect = 0.003
Identities = 30/107 (28%), Positives = 61/107 (56%), Gaps = 11/107 (10%)
Frame = +1
Query: 149 LELTEVRIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQ---- 204
+E+TE + AE++ + + +T +V+ E++E E++EE + E+ E++++
Sbjct: 490 IEVTEEK-KEAEVIEEKK-EVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVT 663
Query: 205 ----EEEELVEEEEEL---EEEVALDDDEKEEEEEEIECEREERVAE 244
E E +VEE++E+ EE+ ++ E ++E E IE ++E V E
Sbjct: 664 EEKKEAEVIVEEKKEVEVTEEKKEVEVTEGKKEVEVIEEKKETEVTE 804
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/57 (33%), Positives = 38/57 (66%)
Frame = +1
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREE 240
EE++E+E +++ E+E + ++E E++EE++E E +EK+E E E+ E++E
Sbjct: 694 EEKKEVEVTEEKKEVEVTEGKKEVEVIEEKKETEV-----TEEKKEVEVEVREEKKE 849
>CF921229
Length = 680
Score = 46.6 bits (109), Expect = 1e-05
Identities = 26/69 (37%), Positives = 43/69 (61%), Gaps = 1/69 (1%)
Frame = -3
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECE- 237
+V + EE++E+E + + E+E +E++E E+ EE++E+E EV + E E +EEE E
Sbjct: 480 EVEVTEEKKEVEVTEGKKEVEVIEEKKETEVTEEKKEVEVEVREEKKESEVKEEEKGQEV 301
Query: 238 REERVAEWG 246
E V WG
Sbjct: 300 VPEEVEIWG 274
Score = 42.4 bits (98), Expect = 2e-04
Identities = 24/71 (33%), Positives = 46/71 (63%), Gaps = 10/71 (14%)
Frame = -3
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELE-----EEVALDDDEKE-----EEEEE 233
EE++E+E +++ EIE +E++E E+ EE++E E +EV + +++KE EE++E
Sbjct: 657 EEKKEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKKEAEVIVEEKKE 478
Query: 234 IECEREERVAE 244
+E E++ E
Sbjct: 477 VEVTEEKKEVE 445
Score = 40.0 bits (92), Expect = 0.001
Identities = 19/59 (32%), Positives = 38/59 (64%)
Frame = -3
Query: 186 EEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
++E E +++ E+E +E++E E+ EE++E E + + E EE++E+E E++ AE
Sbjct: 678 KKEAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKKEAE 502
Score = 38.9 bits (89), Expect = 0.003
Identities = 29/94 (30%), Positives = 56/94 (58%), Gaps = 1/94 (1%)
Frame = -3
Query: 149 LELTEVRIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEE 208
+E+TE + AE+ + +G +T +V+ E++E E+ E+ + E+E +E++E E
Sbjct: 615 IEVTEEK-KEAEVKEEKK-EGEVTEEKKEVEVTEEKKEAEVIVEEKK-EVEVTEEKKEVE 445
Query: 209 LVEEEEELEEEVALDDDEKEEEEEEIECE-REER 241
+ E ++E+E + E EE++E+E E REE+
Sbjct: 444 VTEGKKEVEVIEEKKETEVTEEKKEVEVEVREEK 343
Score = 38.5 bits (88), Expect = 0.004
Identities = 23/70 (32%), Positives = 46/70 (64%), Gaps = 4/70 (5%)
Frame = -3
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEE-LVEEEEEL---EEEVALDDDEKEEEEEEI 234
+ ++EE++E E +++ E+E +E++E E +VEE++E+ EE+ ++ E ++E E I
Sbjct: 591 EAEVKEEKKEGEVTEEKKEVEVTEEKKEAEVIVEEKKEVEVTEEKKEVEVTEGKKEVEVI 412
Query: 235 ECEREERVAE 244
E ++E V E
Sbjct: 411 EEKKETEVTE 382
>BF068812
Length = 379
Score = 46.6 bits (109), Expect = 1e-05
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 121 RSFPPPLSSLNRNGKPSFF--LRPVRKDGRLELTEVRIHRAEILHASRHDGRLTLHLIPD 178
R+FPPPL SL+ + S +R R +GRL L V + R DGRL L
Sbjct: 106 RAFPPPLPSLSHHQASSSVTHMRSHRDNGRLVLEAVSVPSHNNFSIQRQDGRLVL----- 270
Query: 179 QVSLEEEEEEIEEEDDQDEIEED 201
S +EEEE + +D +E+EE+
Sbjct: 271 TFSNHQEEEEEDNDDHVEELEEE 339
>TC222732 similar to UP|Q9LM48 (Q9LM48) F2E2.18, partial (24%)
Length = 930
Score = 46.2 bits (108), Expect = 2e-05
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Frame = +2
Query: 63 PPDWIDETGLVSCTESLGFESSDEIHNKNVGDGDGDGGDEIWRRTMMRAEGRGNRRKLRS 122
PP+ D G SCT+ ++ D + + + D G++ + + ++ +
Sbjct: 341 PPNSDDYIGTESCTD---LQNIDHVIDNHQSFKSNDAGNKT------KVKNNIKMKENKV 493
Query: 123 FPPPLSSLNRNGK-----PSFFLRPVRKDGRLELTEVRIHRAEILHASRHDGRLTLHLIP 177
FPPP+ L R P R +GRL L E ++ E A +GRLTL L+
Sbjct: 494 FPPPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLV- 670
Query: 178 DQVSLEEEEEEIEE--------EDDQDEIEEDQEQEEEELVEEEEELE 217
V ++ +E EE D D + D + +E+EE E
Sbjct: 671 -NVPFDDHDEYFEEATPSPHEAADIIDNVTHDNDITSNGRFDEDEENE 811
>TC226274 similar to UP|Q8L5W5 (Q8L5W5) VERNALIZATION INDEPENDENCE 4, partial
(4%)
Length = 664
Score = 45.4 bits (106), Expect = 3e-05
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = -1
Query: 183 EEEEEEIEEEDDQD---EIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECERE 239
EE E E EEED++ + +ED E E E+ EEEE EE ++D EEEEEE + + +
Sbjct: 652 EEXEYETEEEDERXPSRKRDEDTEPEYEDEEEEEEHYEEAEQVNDASDEEEEEEPKQKNK 473
Query: 240 E 240
E
Sbjct: 472 E 470
Score = 32.7 bits (73), Expect = 0.19
Identities = 13/42 (30%), Positives = 26/42 (60%)
Frame = -1
Query: 192 EDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+D+++E E + E+E+E + + + E +D+E+EEE E
Sbjct: 664 DDEREEXEYETEEEDERXPSRKRDEDTEPEYEDEEEEEEHYE 539
Score = 29.3 bits (64), Expect = 2.1
Identities = 16/45 (35%), Positives = 23/45 (50%)
Frame = -1
Query: 200 EDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
+D+ +E E EEE+E D+D + E E+E E E AE
Sbjct: 664 DDEREEXEYETEEEDERXPSRKRDEDTEPEYEDEEEEEEHYEEAE 530
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
+EEEEE E+ + + E+EEEE ++ +E E +E+ + R+
Sbjct: 568 DEEEEEEHYEEAEQVNDASDEEEEEEPKQKNKEFRGSAKRKGFESDEDSPPRKTTTHRRM 389
Query: 243 A 243
A
Sbjct: 388 A 386
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 45.1 bits (105), Expect = 4e-05
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +2
Query: 179 QVSLEEEEEEIEE--------EDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
+V +EE++EE E EDD+DE E+D + E ++ +EE++ + DDDE +EE
Sbjct: 269 KVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDEDDEE 448
Query: 231 EEEIE 235
E +++
Sbjct: 449 EGDVQ 463
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/76 (35%), Positives = 42/76 (54%), Gaps = 18/76 (23%)
Frame = +2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEE-----------EELEEEVALDDDEK---- 227
E ++++ + +DD D+ E++ E++EEE EEE E EEE A D E
Sbjct: 473 EPDDDDNDSDDDSDDDEDEDEEDEEEQGEEEDLGTEYLIRPLETAEEEEASSDFEPEENG 652
Query: 228 EEEEEEI---ECEREE 240
EEEEE++ +CE+ E
Sbjct: 653 EEEEEDVDDEDCEKAE 700
Score = 42.4 bits (98), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (50%), Gaps = 22/85 (25%)
Frame = +2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVE-----EEEELEEEVAL---------- 222
D+V + E++E EEEDD D+ +D + EE++ + ++E+ EEE +
Sbjct: 311 DEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDD 490
Query: 223 -------DDDEKEEEEEEIECEREE 240
DDDE E+EE+E E EE
Sbjct: 491 NDSDDDSDDDEDEDEEDEEEQGEEE 565
Score = 39.3 bits (90), Expect = 0.002
Identities = 23/83 (27%), Positives = 47/83 (55%), Gaps = 2/83 (2%)
Frame = +2
Query: 155 RIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEE--EELVEE 212
R A+ + SR + + L + +E E++EE + + +EED E+ E +E+V++
Sbjct: 149 REEAAQRISKSRGERNVLWFLDSKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDD 328
Query: 213 EEELEEEVALDDDEKEEEEEEIE 235
E+ E+E DDD++ ++ ++ E
Sbjct: 329 AEDDEDEEEDDDDDEGDDNDDEE 397
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/76 (27%), Positives = 45/76 (58%), Gaps = 13/76 (17%)
Frame = +2
Query: 176 IPDQVSLEEEEEEIEEEDDQ--------DEIEEDQEQEEEELVEEEEELEEEV-----AL 222
+ +QV E + +EE+D++ D+ E+D+++EE++ +E ++ ++E
Sbjct: 239 LSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGG 418
Query: 223 DDDEKEEEEEEIECER 238
DDD+ E++EEE + +R
Sbjct: 419 DDDDDEDDEEEGDVQR 466
Score = 32.0 bits (71), Expect = 0.33
Identities = 18/43 (41%), Positives = 28/43 (64%), Gaps = 2/43 (4%)
Frame = +2
Query: 199 EEDQEQEEEELVEEEEELEEEV--ALDDDEKEEEEEEIECERE 239
E+ +E E + LVEE++E E V +DD E +E+EEE + + E
Sbjct: 245 EQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDE 373
Score = 29.3 bits (64), Expect = 2.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +2
Query: 187 EEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVA------LDDDEKEEEEEEIECEREE 240
E EEE+ + E ++ EEEE ++E+ E+ A D D+ ++++ + ER
Sbjct: 599 ETAEEEEASSDFEPEENGEEEEEDVDDEDCEKAEAPPKRKRSDKDDSDDDDGGEDDERPS 778
Query: 241 RVAEW 245
+ W
Sbjct: 779 KR*SW 793
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 45.1 bits (105), Expect = 4e-05
Identities = 18/62 (29%), Positives = 40/62 (64%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
++++ E EE+DD+D+ + + +++E EEE +++ DDD+ ++++E+ + E EE
Sbjct: 214 DDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEEDEEEQ 393
Query: 243 AE 244
E
Sbjct: 394 GE 399
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/64 (31%), Positives = 41/64 (63%), Gaps = 7/64 (10%)
Frame = +1
Query: 179 QVSLEEEEEEIEEEDDQD-------EIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEE 231
++S +++++ +EEDD + + ++D+++EEE V+ E +++ DDDE E+EE
Sbjct: 199 RLSFDDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEE 378
Query: 232 EEIE 235
+E E
Sbjct: 379 DEEE 390
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/66 (37%), Positives = 38/66 (56%), Gaps = 9/66 (13%)
Frame = +1
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEE-------LVEEEEELEEEVALDDDEKEE--EEEEI 234
E +++ ++DD+DE EED+E++ EE L+ EEE A D E EE EEEE
Sbjct: 328 EPDDDDNDDDDEDEDEEDEEEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEE 507
Query: 235 ECEREE 240
+ + E+
Sbjct: 508 DVDDED 525
Score = 36.6 bits (83), Expect = 0.013
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Frame = +1
Query: 183 EEEEEEIEE--EDDQDEIEEDQEQEEEELVEEEEELEEEVALDDD-------EKEEEEEE 233
EEEE +++ E D D+ ++D E E+E E+EEE EE L + EEEE
Sbjct: 295 EEEESDVQRGGEPDDDDNDDDDEDEDE---EDEEEQGEEADLGTEYLIRPLVTAEEEEAS 465
Query: 234 IECEREERVAE 244
+ E EE E
Sbjct: 466 SDFEPEENGEE 498
Score = 34.3 bits (77), Expect = 0.066
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREER 241
+E+E+E +EE+ +E + E LV EEE ++ EEEEE+++ E E+
Sbjct: 358 DEDEDEEDEEEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEEDVDDEDGEK 534
Score = 32.3 bits (72), Expect = 0.25
Identities = 13/38 (34%), Positives = 27/38 (70%)
Frame = +2
Query: 171 LTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEE 208
L+ H+ ++V++ +EEE EE + +DE+ +D E +E++
Sbjct: 83 LSQHVEENEVTVLVDEEEDEEYESEDEVVDDGEDDEDD 196
Score = 28.5 bits (62), Expect = 3.6
Identities = 23/77 (29%), Positives = 37/77 (47%), Gaps = 10/77 (12%)
Frame = +1
Query: 172 TLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVA---------- 221
T +LI V+ EEEE + E E+ +EEEE V++E+ + E
Sbjct: 415 TEYLIRPLVTAEEEEASSDFEP------EENGEEEEEDVDDEDGEKSEAPPKRKRSDKDD 576
Query: 222 LDDDEKEEEEEEIECER 238
DDD+ E+++E +R
Sbjct: 577 SDDDDGGEDDDERPSKR 627
Score = 28.1 bits (61), Expect = 4.7
Identities = 12/47 (25%), Positives = 30/47 (63%)
Frame = +2
Query: 187 EEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+E+ + +++E+ ++EE+E E E+E+ +DD E +E++++
Sbjct: 77 KELSQHVEENEVTVLVDEEEDEEYESEDEV-----VDDGEDDEDDDD 202
>CO981458
Length = 793
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = -3
Query: 122 SFPPPLSSLNRNGKPSFFLRPVRKDGRLELTEVRIHRAE-ILHASRHDGRLTLHLIPDQV 180
+FPPPL+S+ +R R+DGRL L V + R DGRL L L
Sbjct: 539 TFPPPLTSMG-----GVRVRSHREDGRLILEAVTSSSPQPYFQVERGDGRLRLRLFESVA 375
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDE 226
S E D D + +D+ +E+ V E E+LEE + +DE
Sbjct: 374 SAYYE--------DDDGVADDEALNQEDAVVE-EDLEEYIGNAEDE 264
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,890,154
Number of Sequences: 63676
Number of extensions: 276457
Number of successful extensions: 13062
Number of sequences better than 10.0: 752
Number of HSP's better than 10.0 without gapping: 5171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9084
length of query: 285
length of database: 12,639,632
effective HSP length: 96
effective length of query: 189
effective length of database: 6,526,736
effective search space: 1233553104
effective search space used: 1233553104
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0544.6