BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0544.11
(200 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208112 weakly similar to GB|AAM98099.1|22655016|AY139793 At1g0... 193 5e-50
CD390601 160 5e-40
TC207445 105 1e-23
TC216973 103 4e-23
TC207446 similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7... 103 4e-23
TC228828 similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7... 99 1e-21
TC228827 weakly similar to GB|AAM98099.1|22655016|AY139793 At1g0... 97 5e-21
TC227145 homologue to UP|Q9M426 (Q9M426) Homoglutathione synthet... 42 2e-04
BE059889 40 0.001
CD487297 39 0.002
TC229741 31 0.43
TC221006 31 0.43
TC226157 similar to UP|Q86EG2 (Q86EG2) Clone ZZD434 mRNA sequenc... 29 1.7
TC224361 29 1.7
BG882960 28 3.7
TC227398 similar to GB|BAC75820.1|30038524|AB099346 YGHL1-C3HC4 ... 28 3.7
TC210258 weakly similar to UP|Q9LPM7 (Q9LPM7) F2J10.6 protein, p... 27 4.8
TC206919 weakly similar to UP|Q9LPZ7 (Q9LPZ7) T23J18.4, partial ... 27 4.8
TC207824 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F1... 27 4.8
TC213423 similar to UP|C933_SOYBN (O81973) Cytochrome P450 93A3 ... 27 8.2
>TC208112 weakly similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7A14_6
{Arabidopsis thaliana;} , partial (29%)
Length = 827
Score = 193 bits (490), Expect = 5e-50
Identities = 95/157 (60%), Positives = 116/157 (73%), Gaps = 10/157 (6%)
Frame = +2
Query: 53 VIVEFGPLSRWRLKESASTESPCHHPCDCYCSSAESPPDTF----------DCGKHDPVM 102
++ GP SR +K+SAS++ PCDC+CSSAE D DCGKHDPV+
Sbjct: 173 LVFTVGPPSRSMVKKSASSQFSSCPPCDCFCSSAEYLLDPLGLVNGSIYGADCGKHDPVL 352
Query: 103 NEEMNKDLLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKCNVAMETCEE 162
NEEMNK +L MLSEELNLQ+IV NETLE T +L+M+AR SHYQ E EKCN+ +ETCEE
Sbjct: 353 NEEMNKGILKMLSEELNLQKIVANETLEHTKQLIMDARKTFSHYQKEAEKCNIGVETCEE 532
Query: 163 ARERAEAELIEEHRVTALWENRAREYGWKDKRRTRLR 199
ARERAEAELIEEH++TALWENRAREYGW + ++ L+
Sbjct: 533 ARERAEAELIEEHKLTALWENRAREYGWVE*QKNTLK 643
>CD390601
Length = 528
Score = 160 bits (404), Expect = 5e-40
Identities = 72/106 (67%), Positives = 86/106 (80%)
Frame = -1
Query: 94 DCGKHDPVMNEEMNKDLLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKC 153
DCGKHDP++NEEMNK LLTMLSEELNLQ+IV NET+E T +L+M+AR SHYQ E EKC
Sbjct: 486 DCGKHDPILNEEMNKGLLTMLSEELNLQKIVANETMEHTKQLIMDARKTFSHYQKEAEKC 307
Query: 154 NVAMETCEEARERAEAELIEEHRVTALWENRAREYGWKDKRRTRLR 199
N+ +ETCEEARER E ELIEEH++T LWENRA YGW + + L+
Sbjct: 306 NIGVETCEEARERXEXELIEEHKLTTLWENRASPYGWXE*LKNTLK 169
>TC207445
Length = 765
Score = 105 bits (263), Expect = 1e-23
Identities = 55/131 (41%), Positives = 77/131 (57%), Gaps = 6/131 (4%)
Frame = +1
Query: 68 SASTESPCHHPCDCYCSSAESPPDTF------DCGKHDPVMNEEMNKDLLTMLSEELNLQ 121
S+ST +PC CDC S P DC K DP ++ + K+ +L+EEL LQ
Sbjct: 103 SSSTCAPCI--CDCSSQPILSIPQGLSNTSFGDCAKPDPEVSGDTEKNFAELLTEELKLQ 276
Query: 122 RIVTNETLEQTDRLVMNARNASSHYQMETEKCNVAMETCEEARERAEAELIEEHRVTALW 181
E ++ D ++ A+ +S YQ E +KCN METCEEARE+AE L+ + ++TALW
Sbjct: 277 ESQAVENQQRADMALLEAKKIASQYQKEADKCNSGMETCEEAREKAELTLVTQKKLTALW 456
Query: 182 ENRAREYGWKD 192
E RAR+ GWK+
Sbjct: 457 ELRARQKGWKE 489
>TC216973
Length = 911
Score = 103 bits (258), Expect = 4e-23
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Frame = +1
Query: 50 IVQVIVEFGPLSRWRLKESASTESPCHHPCDCYCSSAESPP--------------DTFDC 95
+V + GP WR K + + + ++ C + PP DC
Sbjct: 64 VVSALGVCGPALYWRFKNAITLRNN-NNKLSCPSCLCDCPPPLSLFQLAPGLANLSVSDC 240
Query: 96 GKHDPVMNEEMNKDLLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKCNV 155
G +DP + EEM K + +LSEEL LQ VT + + A+ +S YQ E +KC
Sbjct: 241 GSNDPDLKEEMEKQFVDLLSEELKLQESVTEANTRHMNITLAEAKRVASQYQREADKCIT 420
Query: 156 AMETCEEARERAEAELIEEHRVTALWENRAREYGWK 191
A ETCE+ARERA+A L +E ++T++WE RAR+ GW+
Sbjct: 421 ATETCEQARERAQAILTKEKKMTSVWEKRARQMGWE 528
>TC207446 similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7A14_6
{Arabidopsis thaliana;} , partial (73%)
Length = 817
Score = 103 bits (258), Expect = 4e-23
Identities = 58/148 (39%), Positives = 80/148 (53%), Gaps = 13/148 (8%)
Frame = +1
Query: 58 GPLSRWRLKE-------SASTESPCHHPCDCYCSSAESPPDTF------DCGKHDPVMNE 104
GP W E S+ST +PC CDC S P DC K DP ++
Sbjct: 241 GPPLYWHFVEGLAAVNHSSSTCAPCI--CDCSSQPILSIPQGLSNTSFGDCAKPDPEVSG 414
Query: 105 EMNKDLLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKCNVAMETCEEAR 164
+ K+ +L+EEL L+ E + D ++ A+ +S YQ E +KCN METCEEAR
Sbjct: 415 DTEKNFAELLAEELKLRENQAVENQQHADMALLEAKKIASQYQKEADKCNSGMETCEEAR 594
Query: 165 ERAEAELIEEHRVTALWENRAREYGWKD 192
E+AE L+ + ++TALWE RAR+ GWK+
Sbjct: 595 EKAELTLVTQKKLTALWELRARKKGWKE 678
>TC228828 similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7A14_6
{Arabidopsis thaliana;} , partial (54%)
Length = 815
Score = 99.0 bits (245), Expect = 1e-21
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Frame = +2
Query: 60 LSRWRLKESASTE-----SPCHHPCDCYCSSAESPPDT------------FDCGKHDPVM 102
+S WR +S E CHH S + P T +C KH+P +
Sbjct: 41 VSAWRYNKSLRAEFLFCLQLCHHKNTASMSFSYPTPFTNCYFFS*LIELSLECAKHNPKV 220
Query: 103 NEEMNKDLLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKCNVAMETCEE 162
+ + ++ +LSEELNL+ + + D ++ ++ +S YQ E +KCN METCEE
Sbjct: 221 DGDTENNVAELLSEELNLRETEALKNQHRADMALLESKKIASQYQKEADKCNSGMETCEE 400
Query: 163 ARERAEAELIEEHRVTALWENRAREYGWKD 192
ARE+AE L+ + +++ALWE RAR+ GW +
Sbjct: 401 AREKAEMALVAQKKLSALWEQRARQKGWNE 490
>TC228827 weakly similar to GB|AAM98099.1|22655016|AY139793 At1g05070/T7A14_6
{Arabidopsis thaliana;} , partial (71%)
Length = 808
Score = 97.1 bits (240), Expect = 5e-21
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Frame = +3
Query: 63 WRLKE-----SASTESPCHHPCDCYCSSAE--------SPPDTFDCGKHDPVMNEEMNKD 109
W L E S S+ S PC C CSS S +C KH+P ++ + +
Sbjct: 156 WHLIELLNHSSVSSSSSSCAPCVCDCSSQPIITIPQGLSNSSFEECAKHNPKVDGDTENN 335
Query: 110 LLTMLSEELNLQRIVTNETLEQTDRLVMNARNASSHYQMETEKCNVAMETCEEARERAEA 169
+ +LSEEL L+ + + D ++ ++ +S YQ E +KCN METCEEARE+AE
Sbjct: 336 VAELLSEELTLRETEALKNQHRADMALLESKKIASQYQKEADKCNSGMETCEEAREKAEM 515
Query: 170 ELIEEHRVTALWENRAREYGWKD 192
L+ + ++TALWE RA + GW +
Sbjct: 516 ALVAQKKLTALWELRACQKGWNE 584
>TC227145 homologue to UP|Q9M426 (Q9M426) Homoglutathione synthetase ,
partial (39%)
Length = 919
Score = 42.0 bits (97), Expect = 2e-04
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -1
Query: 141 NASSHYQMETEKCNVAMETCEEARERAEAELIEEHRVTALWENRAREYGWKDKRRT 196
N+ SHYQ E EKC+V M EEAR RA+ ELI+ R+ E + + W + R+
Sbjct: 904 NSFSHYQKEAEKCSVGM---EEARGRAQTELIDGDRL----EEQFINFYWLESNRS 758
>BE059889
Length = 388
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Frame = +1
Query: 50 IVQVIVEFGPLSRWR------LKESASTESPCHHPCDCYC----SSAESPP-----DTFD 94
+V + GP WR L+ S S++ C PC C C S + P D
Sbjct: 130 VVSXLGVCGPALYWRFKNAITLRNSHSSKLSCP-PCLCDCPPPLSLFQLAPGLANLSISD 306
Query: 95 CGKHDPVMNEEMNKDLLTMLSEELNLQ 121
CG +DP + EEM + +LSEEL LQ
Sbjct: 307 CGSNDPDLKEEMEEQFGDLLSEELKLQ 387
>CD487297
Length = 594
Score = 38.9 bits (89), Expect = 0.002
Identities = 17/35 (48%), Positives = 25/35 (70%)
Frame = +3
Query: 53 VIVEFGPLSRWRLKESASTESPCHHPCDCYCSSAE 87
++ GP SR R+++S S++ C PCDC+CSSAE
Sbjct: 411 LVFTVGPPSRSRVRKSVSSQLSCP-PCDCFCSSAE 512
>TC229741
Length = 610
Score = 30.8 bits (68), Expect = 0.43
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 64 RLKESASTESPCHHPCDCYCSSAESP 89
R K++ E P H+ C CYCSS+ P
Sbjct: 53 RKKKTHGHEHPPHYCCSCYCSSSIQP 130
>TC221006
Length = 720
Score = 30.8 bits (68), Expect = 0.43
Identities = 43/160 (26%), Positives = 60/160 (36%), Gaps = 4/160 (2%)
Frame = +1
Query: 14 DSHPFISEHTASSQSPRSSNGSVSVDV---HITCESPSDIVQVIVEFGPLSRWRLKESAS 70
DS SE A S+S +V D S D + F LS E
Sbjct: 106 DSQEVKSEDIALSRSDGGGGDAVEFDDKEGESLSRSEDDKTDDFIGFSRLSL----EDKG 273
Query: 71 TESPCHHPCDCYCSSAESPPDTFDCGKHDPVMNEEMNKDLLTMLSEELNLQRIVTNETLE 130
SP P YCSS+ S + D + + NKDLL+ S + L
Sbjct: 274 WVSP---PDSIYCSSSGSDISLAEVSLPDSLNDSAGNKDLLSQGSGSRIPTGYMHTTLLS 444
Query: 131 QTDRLVMNARNASSHYQMETEKCNV-AMETCEEARERAEA 169
QTD ++ S +ET+ ++++ EA E AEA
Sbjct: 445 QTDVEQISPFELSESSPVETDLNRAGSVKSINEATEHAEA 564
>TC226157 similar to UP|Q86EG2 (Q86EG2) Clone ZZD434 mRNA sequence, partial
(12%)
Length = 563
Score = 28.9 bits (63), Expect = 1.7
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 4/43 (9%)
Frame = +1
Query: 52 QVIVEFGPL----SRWRLKESASTESPCHHPCDCYCSSAESPP 90
QVI+ F P SRWR + +ST S C C S E+PP
Sbjct: 148 QVILIFPPRKRCRSRWRRRRRSSTRSWWCARCRCTRSRREAPP 276
>TC224361
Length = 679
Score = 28.9 bits (63), Expect = 1.7
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 97 KHDPVMNEEMNKDLLTMLSEELNLQRIVTNETLEQTDRL-VMNARNASSHYQMETEKCNV 155
+H ++ E+++ DL TML E+ N + ETL+ RL + R +H+ ++
Sbjct: 295 QHKQLLCEQVS-DLKTMLDEKQNQLKCCELETLKIETRLGDLKRRMLETHFTLKER---- 459
Query: 156 AMETCEEARERAE 168
+E EEAR+++E
Sbjct: 460 -VEQTEEARKQSE 495
>BG882960
Length = 386
Score = 27.7 bits (60), Expect = 3.7
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
Frame = -2
Query: 68 SASTESPCHHPC-------DCYCSSAESPPDTF 93
SA SPCH+PC DC S PP F
Sbjct: 265 SAPQRSPCHYPCPPFLHTEDC*KSLESFPPGVF 167
>TC227398 similar to GB|BAC75820.1|30038524|AB099346 YGHL1-C3HC4 RING fusion
protein {Arabidopsis thaliana;} , partial (19%)
Length = 714
Score = 27.7 bits (60), Expect = 3.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 66 KESASTESPCHHPCDCYC 83
+E AS+E C H C CYC
Sbjct: 145 REEASSEPFCPHWCTCYC 198
>TC210258 weakly similar to UP|Q9LPM7 (Q9LPM7) F2J10.6 protein, partial (66%)
Length = 608
Score = 27.3 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 6 FSIHVNLTDSHPFISEHTASSQSPR 30
FS+ NLT S PFIS + ++ SP+
Sbjct: 356 FSVSQNLTASEPFISPYPSARFSPK 282
>TC206919 weakly similar to UP|Q9LPZ7 (Q9LPZ7) T23J18.4, partial (15%)
Length = 1095
Score = 27.3 bits (59), Expect = 4.8
Identities = 21/73 (28%), Positives = 31/73 (41%), Gaps = 7/73 (9%)
Frame = -1
Query: 64 RLKESASTESPCH----HPCDCYCSSAESPPDTF---DCGKHDPVMNEEMNKDLLTMLSE 116
R S SP H PC CSS+ SPP +F C + + M+K + S+
Sbjct: 282 RRSSKQSRSSPSHILKTPPC---CSSSPSPPPSFPQLPCELCNATEEQSMSKSKTAIPSK 112
Query: 117 ELNLQRIVTNETL 129
L+ ++ TL
Sbjct: 111 SLSFSPSASSSTL 73
>TC207824 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F14F18_180
{Arabidopsis thaliana;} , partial (38%)
Length = 847
Score = 27.3 bits (59), Expect = 4.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 59 PLSRWRLKESASTESPCHHPCDCYCSSAE-SPPDT 92
P S W S ++P HHP D + + SPP T
Sbjct: 516 PSSSWSSLTSRQPQAPSHHPSDQPSAQGQSSPPST 412
>TC213423 similar to UP|C933_SOYBN (O81973) Cytochrome P450 93A3 (P450 CP5)
, partial (21%)
Length = 514
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/70 (32%), Positives = 28/70 (39%)
Frame = +3
Query: 24 ASSQSPRSSNGSVSVDVHITCESPSDIVQVIVEFGPLSRWRLKESASTESPCHHPCDCYC 83
+S P S N + S+ VH PS + P S ST SP C
Sbjct: 108 SSPLEPYSPNSATSLAVH-RAHGPSPSSATSISSPPCLT-----SLSTRSPRATAPPCKS 269
Query: 84 SSAESPPDTF 93
SSA SPP +F
Sbjct: 270 SSAPSPPWSF 299
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.128 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,371,556
Number of Sequences: 63676
Number of extensions: 151430
Number of successful extensions: 1110
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of query: 200
length of database: 12,639,632
effective HSP length: 92
effective length of query: 108
effective length of database: 6,781,440
effective search space: 732395520
effective search space used: 732395520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0544.11