BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0520.2
(280 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216058 similar to UP|MCAT_ARATH (Q93XM7) Mitochondrial carniti... 245 2e-65
TC216059 similar to GB|BAB08924.1|9758516|AB016882 carnitine/acy... 151 4e-37
BG790037 96 2e-20
TC210623 similar to UP|MCAT_ARATH (Q93XM7) Mitochondrial carniti... 88 4e-18
BE329901 86 2e-17
TC231040 similar to UP|Q9MBE7 (Q9MBE7) SfUCPa, partial (67%) 59 2e-09
TC222418 UP|Q8W1A3 (Q8W1A3) Uncoupling protein 1b (Fragment), pa... 58 5e-09
TC227864 uncoupling protein 1a [Glycine max] 55 3e-08
TC233338 55 4e-08
TC230846 similar to PIR|H86274|H86274 F7A19.22 protein - Arabido... 53 1e-07
TC215421 weakly similar to UP|DIC_MOUSE (Q9QZD8) Mitochondrial d... 52 3e-07
TC215423 weakly similar to GB|AAH19631.1|18043006|BC019631 solut... 50 9e-07
TC228779 similar to PIR|T05577|T05577 uncoupling protein homolog... 46 2e-05
TC215271 similar to PIR|T01729|T01729 mitochondrial solute carri... 46 2e-05
TC215274 similar to PIR|T01729|T01729 mitochondrial solute carri... 46 2e-05
TC228373 similar to GB|AAM19967.1|20466091|AY098957 AT5g01340/T1... 45 5e-05
TC221832 similar to UP|Q75AH6 (Q75AH6) ADL049Wp, partial (3%) 44 8e-05
TC221857 similar to UP|Q8LFJ3 (Q8LFJ3) Contains similarity to pe... 44 8e-05
TC224733 similar to GB|AAP12888.1|30017309|BT006239 At5g48970 {A... 43 2e-04
TC215270 similar to PIR|T01729|T01729 mitochondrial solute carri... 42 4e-04
>TC216058 similar to UP|MCAT_ARATH (Q93XM7) Mitochondrial
carnitine/acylcarnitine carrier-like protein (A BOUT DE
SOUFFLE) (Carnitine/acylcarnitine translocase-like
protein) (CAC-like protein), partial (97%)
Length = 1441
Score = 245 bits (625), Expect = 2e-65
Identities = 158/303 (52%), Positives = 179/303 (58%), Gaps = 24/303 (7%)
Frame = +2
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
MGDVAKDL AGTV GAAQLI GHPFDTIKVKLQSQP P+PGQLP+YSGA DAVKQT+AAE
Sbjct: 380 MGDVAKDLAAGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQLPKYSGAFDAVKQTIAAE 559
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAVSF 108
G RGLYKG GAPLATVAAFNA LFTVRGQME L RS+P GAGAG+AVS
Sbjct: 560 GARGLYKGMGAPLATVAAFNAVLFTVRGQMETLVRSNPGAPLTVDQQVVCGAGAGVAVSI 739
Query: 109 LVCPTELIKCRFH*WRFNCHVLVTFSVHSFYQLM*ILSSLITNK---KNLTIKLVLVLQQ 165
L CPTELIKCR + M + ++ ++ + L LV + +
Sbjct: 740 LACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLKSEGGMRGLFKGLVPTMGR 919
Query: 166 PMP*NQIAKGTS*MNLSACLEILQQFI--------LKS*SVMVAEGLTVASFRFLVYGTG 217
+P N I G E L+Q L S++VA GL ASF FLVY T
Sbjct: 920 EIPGNAIMFGV--------YEALKQKFAGGTDTSGLSRGSLIVAGGLAGASFWFLVYPTD 1075
Query: 218 VVKK*FK*MTREIQNFQVQLMLLEGF-*PEGITGLYKGFGTAMFRSVPVNAACFLAYKMT 276
V+K + F EG GLYKGFG AM RSVP NAACFLAY+MT
Sbjct: 1076VIKSVIQVDDHRNPKFSGSFDAFRKIRATEGFKGLYKGFGPAMARSVPANAACFLAYEMT 1255
Query: 277 RSA 279
RSA
Sbjct: 1256RSA 1264
>TC216059 similar to GB|BAB08924.1|9758516|AB016882 carnitine/acylcarnitine
translocase-like protein {Arabidopsis thaliana;} ,
partial (29%)
Length = 581
Score = 151 bits (381), Expect = 4e-37
Identities = 74/84 (88%), Positives = 77/84 (91%)
Frame = +1
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
MGDVAKDL AGTV GAAQLI GHPFDTIKVKLQSQP P+PGQLP+YSGA DAVKQT+AAE
Sbjct: 328 MGDVAKDLAAGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQLPKYSGAFDAVKQTIAAE 507
Query: 61 GPRGLYKGRGAPLATVAAFNAALF 84
GPRGLYKG GAPLATVAAFNA LF
Sbjct: 508 GPRGLYKGMGAPLATVAAFNAVLF 579
>BG790037
Length = 431
Score = 95.9 bits (237), Expect = 2e-20
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +2
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAI 50
MGDVAKDL AGTV GAAQLIVGHPFDTIKVKLQSQPTP+PGQ PRYSGAI
Sbjct: 281 MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQFPRYSGAI 430
>TC210623 similar to UP|MCAT_ARATH (Q93XM7) Mitochondrial
carnitine/acylcarnitine carrier-like protein (A BOUT DE
SOUFFLE) (Carnitine/acylcarnitine translocase-like
protein) (CAC-like protein), partial (63%)
Length = 690
Score = 88.2 bits (217), Expect = 4e-18
Identities = 72/193 (37%), Positives = 93/193 (47%), Gaps = 12/193 (6%)
Frame = +1
Query: 99 GAGAGLAVSFLVCPTELIKCRFH*WRFNCHVLVTFSVHSFYQLM*ILSSLITNK---KNL 155
GAGAG+AVSFL CPTELIKCR + M + ++ ++ K L
Sbjct: 37 GAGAGVAVSFLACPTELIKCRLQAQSVLAGTGTAAVAVKYGGPMDVARQVLRSEGGVKGL 216
Query: 156 TIKLVLVLQQPMP*NQIAKGTS*MNLSACLEILQQFI--------LKS*SVMVAEGLTVA 207
LV + + +P N G E L++ + L S+M++ GL A
Sbjct: 217 FKGLVPTMAREVPGNAAMFGV--------YEALKRLLAGGTDTSGLGRGSLMLSGGLAGA 372
Query: 208 SFRFLVYGTGVVKK*FK*MTREIQNFQVQLMLLEGF*P-EGITGLYKGFGTAMFRSVPVN 266
+F VY T VVK + + F + EGI GLYKGFG AM RSVP N
Sbjct: 373 AFWLAVYPTDVVKSVIQVDDYKNPKFSGSIDAFRRISASEGIKGLYKGFGPAMARSVPAN 552
Query: 267 AACFLAYKMTRSA 279
AACFLAY+MTRSA
Sbjct: 553 AACFLAYEMTRSA 591
Score = 50.1 bits (118), Expect = 1e-06
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
+++G + GAA + +P D +K +Q + P++SG+IDA ++ A+EG +GLYK
Sbjct: 346 MLSGGLAGAAFWLAVYPTDVVKSVIQVDDY----KNPKFSGSIDAFRRISASEGIKGLYK 513
Query: 68 GRGAPLATVAAFNAALF 84
G G +A NAA F
Sbjct: 514 GFGPAMARSVPANAACF 564
Score = 43.9 bits (102), Expect = 8e-05
Identities = 36/132 (27%), Positives = 57/132 (42%), Gaps = 18/132 (13%)
Frame = +1
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQP----TPIPGQLPRYSGAIDAVKQTLAA 59
+ + ++ G G A + P + IK +LQ+Q T +Y G +D +Q L +
Sbjct: 16 INQQVVCGAGAGVAVSFLACPTELIKCRLQAQSVLAGTGTAAVAVKYGGPMDVARQVLRS 195
Query: 60 EGP-RGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSH-------------PGAGAGLA 105
EG +GL+KG +A NAA+F V ++ L G AG A
Sbjct: 196 EGGVKGLFKGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSGLGRGSLMLSGGLAGAA 375
Query: 106 VSFLVCPTELIK 117
V PT+++K
Sbjct: 376 FWLAVYPTDVVK 411
>BE329901
Length = 463
Score = 85.9 bits (211), Expect = 2e-17
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLP 44
MGDVAKDL AGTV GAAQLIVGHPFDTIKVKLQSQPTP+PGQLP
Sbjct: 330 MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLP 461
>TC231040 similar to UP|Q9MBE7 (Q9MBE7) SfUCPa, partial (67%)
Length = 980
Score = 59.3 bits (142), Expect = 2e-09
Identities = 44/130 (33%), Positives = 66/130 (49%), Gaps = 18/130 (13%)
Frame = +3
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLP-----RYSGAIDAVKQTLAAEGP 62
++A + GA + + +P D +KV+LQ++ GQLP RYSGAIDA L EG
Sbjct: 81 ILAALLTGALAITIANPTDLVKVRLQAE-----GQLPSGVPRRYSGAIDAYLTILRQEGI 245
Query: 63 RGLYKGRGAPLATVAAFNAA-----------LFTVRGQMEALFRSH--PGAGAGLAVSFL 109
L+ G G +A A NAA + + G M+ ++ +H G GAGL F+
Sbjct: 246 GALWTGLGPNIARNAIINAAELASYDKVKRTILKIPGFMDNVY-THLLAGLGAGLFAVFI 422
Query: 110 VCPTELIKCR 119
P +++K R
Sbjct: 423 GSPVDVVKSR 452
>TC222418 UP|Q8W1A3 (Q8W1A3) Uncoupling protein 1b (Fragment), partial (98%)
Length = 884
Score = 57.8 bits (138), Expect = 5e-09
Identities = 44/134 (32%), Positives = 65/134 (47%), Gaps = 15/134 (11%)
Frame = +3
Query: 1 MGDV--AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLA 58
+GDV +K ++AG GA + V +P D +KV+LQ++ PG RYSG+++A +
Sbjct: 201 VGDVPLSKKILAGFTTGAMAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVR 380
Query: 59 AEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHPG----------AGAGLAVSF 108
EG L+ G G +A NAA Q++ PG AG G A F
Sbjct: 381 QEGVGALWTGIGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLG-AGFF 557
Query: 109 LVC---PTELIKCR 119
VC P +++K R
Sbjct: 558 AVCVGSPVDVVKSR 599
Score = 37.0 bits (84), Expect = 0.010
Identities = 22/89 (24%), Positives = 38/89 (41%)
Frame = +3
Query: 3 DVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGP 62
+V L+AG G + VG P D +K ++ + Y +D +TL +GP
Sbjct: 513 NVVTHLLAGLGAGFFAVCVGSPVDVVKSRMMGDSS--------YKSTLDCFVKTLKNDGP 668
Query: 63 RGLYKGRGAPLATVAAFNAALFTVRGQME 91
YKG + ++N +F Q++
Sbjct: 669 FAFYKGFIPNFGRLGSWNVIMFLTLEQVQ 755
>TC227864 uncoupling protein 1a [Glycine max]
Length = 1434
Score = 55.5 bits (132), Expect = 3e-08
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Frame = +1
Query: 1 MGDV--AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLA 58
+GDV +K ++A GA + V +P D +KV+LQ++ PG RYSG+++A +
Sbjct: 547 VGDVPLSKKILAAFTTGAFAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVR 726
Query: 59 AEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHPG----------AGAGLAVSF 108
EG L+ G G +A NAA Q++ PG AG G A F
Sbjct: 727 QEGVGALWTGLGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLG-AGFF 903
Query: 109 LVC---PTELIKCR 119
VC P +++K R
Sbjct: 904 AVCIGSPVDVVKSR 945
Score = 37.0 bits (84), Expect = 0.010
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +1
Query: 3 DVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGP 62
+V L+AG G + +G P D +K ++ + Y +D +TL +GP
Sbjct: 859 NVVTHLLAGLGAGFFAVCIGSPVDVVKSRMMGDSS--------YKNTLDCFIKTLKNDGP 1014
Query: 63 RGLYKGRGAPLATVAAFNAALFTVRGQMEALFRS 96
YKG + ++N +F Q + +S
Sbjct: 1015LAFYKGFLPNFGRLGSWNVIMFLTLEQTKKFVKS 1116
Score = 34.7 bits (78), Expect = 0.049
Identities = 19/48 (39%), Positives = 24/48 (49%), Gaps = 3/48 (6%)
Frame = +1
Query: 24 PFDTIKVKLQSQPTPIPGQ---LPRYSGAIDAVKQTLAAEGPRGLYKG 68
P DT KV+LQ Q + G LP+Y G + V EG L+KG
Sbjct: 310 PLDTAKVRLQLQKQAVAGDVVSLPKYKGMLGTVGTIAREEGLSALWKG 453
>TC233338
Length = 398
Score = 55.1 bits (131), Expect = 4e-08
Identities = 39/124 (31%), Positives = 56/124 (44%), Gaps = 14/124 (11%)
Frame = +3
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
K+ +AG G A +I G+P DT++V QS S A ++ +A EGP L
Sbjct: 51 KEFVAGGFGGTAGIISGYPLDTLRVMQQSSNNG--------SAAFTILRNLVAKEGPTAL 206
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALFR---------SHPGAG-----AGLAVSFLVC 111
Y+G APLA+V NA +F + + F S+ G +G S L+
Sbjct: 207 YRGMAAPLASVTFQNAMVFQIYAVLSRAFSTSVSVNDPPSYKGVALGGFCSGALQSMLLS 386
Query: 112 PTEL 115
P EL
Sbjct: 387 PVEL 398
>TC230846 similar to PIR|H86274|H86274 F7A19.22 protein - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (59%)
Length = 754
Score = 53.1 bits (126), Expect = 1e-07
Identities = 35/124 (28%), Positives = 61/124 (48%), Gaps = 13/124 (10%)
Frame = +2
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIP-GQLPRYSGAIDAVKQTLAAEGPRGLYK 67
+ G + G ++ P D +KV++Q+ + G PRYSG DA+ + + AEG +GL+K
Sbjct: 53 VVGGISGVLAQVIASPADLVKVRMQADGQRVSQGLQPRYSGPFDALNKIVRAEGFQGLWK 232
Query: 68 G-----RGAPLATVAAF----NAALFTVRGQM---EALFRSHPGAGAGLAVSFLVCPTEL 115
G + A L + +A F +R ++ + +GLA + L CP ++
Sbjct: 233 GVFPNIQRAFLVNMGELACYDHAKQFVIRSRIADDNVFAHTFASIMSGLAATSLSCPADV 412
Query: 116 IKCR 119
+K R
Sbjct: 413 VKTR 424
>TC215421 weakly similar to UP|DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate
carrier, partial (13%)
Length = 1292
Score = 52.0 bits (123), Expect = 3e-07
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +1
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
A G + +P D IK ++ + PG+ P Y+GA+D +T+ AEGP LYKG
Sbjct: 880 ASFAAGFVAAVASNPIDVIKTRVMNMRVE-PGEAPPYAGALDCALKTVRAEGPMALYKGF 1056
Query: 70 GAPLATVAAFNAALFTVRGQMEALFR 95
++ F LF Q+ L +
Sbjct: 1057IPTISRQGPFTVVLFVTLEQVRKLLK 1134
Score = 39.3 bits (90), Expect = 0.002
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+ K + AG + G VG+P D V++Q+ P Q Y +DA+ + EG
Sbjct: 562 LGKKIEAGLIAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITRMAKQEGVT 741
Query: 64 GLYKG 68
L++G
Sbjct: 742 SLWRG 756
Score = 27.7 bits (60), Expect = 6.0
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Frame = +1
Query: 9 IAGTVEGA-AQLIVG---HPFDTIKVKLQSQ-----PTPIPGQLPRYSGAIDAVKQTLAA 59
+ G VEG A +I G HP D IKV++Q Q P P+ P + + AA
Sbjct: 196 VKGFVEGGIASIIAGCSTHPLDLIKVRMQLQGENNLPKPVQNLRPALAFQTGSTLHVAAA 375
Query: 60 EGP 62
P
Sbjct: 376 VPP 384
>TC215423 weakly similar to GB|AAH19631.1|18043006|BC019631 solute carrier
family 25 (mitochondrial carrier oxoglutarate carrier),
member 11 {Mus musculus;} , partial (25%)
Length = 773
Score = 50.4 bits (119), Expect = 9e-07
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +2
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
A G + +P D IK ++ + PG P Y+GA+D +T+ AEGP LYKG
Sbjct: 293 ASFAAGFVAAVASNPVDVIKTRVMNMRVE-PGATPPYAGALDCALKTVRAEGPMALYKGF 469
Query: 70 GAPLATVAAFNAALFTVRGQMEALFR 95
++ F LF Q+ L +
Sbjct: 470 IPTISRQGPFTVVLFVTLEQVRKLLK 547
Score = 32.7 bits (73), Expect = 0.19
Identities = 30/119 (25%), Positives = 49/119 (40%), Gaps = 12/119 (10%)
Frame = +2
Query: 13 VEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGRG-- 70
+ G VG+P D V++Q+ Q Y +DA+ + EG L++G
Sbjct: 2 IAGGIGAAVGNPADVAMVRMQADGRLXXAQRRNYKSVVDAITRMAKQEGVTSLWRGSSLT 181
Query: 71 ---APLAT---VAAFNAALFTV--RGQMEALFRSHPGA--GAGLAVSFLVCPTELIKCR 119
A L T +A+++ T+ G M +H A AG + P ++IK R
Sbjct: 182 VNRAMLVTASQLASYDQFKETILENGMMRDGLGTHVTASFAAGFVAAVASNPVDVIKTR 358
>TC228779 similar to PIR|T05577|T05577 uncoupling protein homolog F22K18.230
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(45%)
Length = 666
Score = 46.2 bits (108), Expect = 2e-05
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
++A G I +P D IK ++ + + Y+GA+D +T+ AEGP LYK
Sbjct: 171 VLASFAAGFVASIASNPIDVIKTRVMNM------KAEAYNGALDCALKTVRAEGPLALYK 332
Query: 68 GRGAPLATVAAFNAALFTVRGQMEALFR 95
G ++ F LF Q+ LF+
Sbjct: 333 GFIPTISRQGPFTVVLFVTLEQVRKLFK 416
>TC215271 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (78%)
Length = 1089
Score = 45.8 bits (107), Expect = 2e-05
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 19/138 (13%)
Frame = +3
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
+ + K L+AG V G P + +K+ LQ Q P + +Y+G + +K E
Sbjct: 318 LASICKSLVAGGVAGGVSRTAVAPLERLKILLQVQN---PHNI-KYNGTVQGLKYIWRTE 485
Query: 61 GPRGLYKGRGAPLATVAAFNAALF-------------------TVRGQMEALFRSHPGAG 101
G RGL+KG G A + +A F Q+ L R GA
Sbjct: 486 GFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILHLYKQQTGNEDAQLTPLLRLGAGAC 665
Query: 102 AGLAVSFLVCPTELIKCR 119
AG+ P ++++ R
Sbjct: 666 AGIIAMSATYPMDMVRGR 719
Score = 37.4 bits (85), Expect = 0.008
Identities = 33/128 (25%), Positives = 50/128 (38%), Gaps = 18/128 (14%)
Frame = +3
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
AG G + +P D ++ ++ Q P Q Y G A+ L EGPR LYKG
Sbjct: 654 AGACAGIIAMSATYPMDMVRGRITVQTEASPYQ---YRGMFHALSTVLREEGPRALYKGW 824
Query: 70 GAPLATVAAFNAALFTVRGQM-EALFRSHP-----------------GAGAGLAVSFLVC 111
+ V + F V + + L +S+P GA AG +
Sbjct: 825 LPSVIGVIPYVGLNFAVYESLKDYLIKSNPFDLVENSELSVTTRLACGAAAGTVGQTVAY 1004
Query: 112 PTELIKCR 119
P ++I+ R
Sbjct: 1005PLDVIRRR 1028
>TC215274 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (77%)
Length = 1034
Score = 45.8 bits (107), Expect = 2e-05
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Frame = +2
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQ-PTPIPGQLPRYSGAIDAVKQTLAAEGP 62
+ K L+AG V G P + +K+ LQ Q P I +Y+G I +K EG
Sbjct: 266 ICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNPHSI-----KYNGTIQGLKYIWRTEGF 430
Query: 63 RGLYKGRGAPLATVAAFNAALF-------------------TVRGQMEALFRSHPGAGAG 103
RGL+KG G A + +A F Q+ L R GA AG
Sbjct: 431 RGLFKGNGTNCARIVPNSAVKFFSYEQASKGILHLYRKQTGNEDAQLTPLLRLGAGACAG 610
Query: 104 LAVSFLVCPTELIKCR 119
+ P ++++ R
Sbjct: 611 IIAMSATYPMDMVRGR 658
Score = 36.2 bits (82), Expect = 0.017
Identities = 20/59 (33%), Positives = 27/59 (44%)
Frame = +2
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
AG G + +P D ++ ++ Q P Q Y G A+ L EGPR LYKG
Sbjct: 593 AGACAGIIAMSATYPMDMVRGRITVQTEKSPYQ---YRGMFHALSTVLREEGPRALYKG 760
>TC228373 similar to GB|AAM19967.1|20466091|AY098957 AT5g01340/T10O8_50
{Arabidopsis thaliana;} , partial (96%)
Length = 1424
Score = 44.7 bits (104), Expect = 5e-05
Identities = 28/101 (27%), Positives = 49/101 (47%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 GDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEG 61
G + AG +E +I+ PF+ +K++LQ Q P +L +Y G + + + EG
Sbjct: 590 GRILSGFGAGVLEA---IIIVTPFEVVKIRLQQQRGLSP-ELLKYKGPVHCARMIIREEG 757
Query: 62 PRGLYKGRGAPLATVAAFNAALFTVRGQMEA-LFRSHPGAG 101
RGL+ G + +A+FT + + L++ H G G
Sbjct: 758 FRGLWAGVAPTVMRNGKNQSAMFTAKNAFDVLLWKKHEGDG 880
Score = 41.2 bits (95), Expect = 5e-04
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +2
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
+ +I+G + G A I PFD +K +L +Q T G + +Y G I A++ EG L
Sbjct: 899 QSMISGFLAGTAGPICTGPFDVVKTRLMAQ-TREGGGVLKYKGMIHAIRTIYVEEGLLAL 1075
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALF 94
+KG L + A ++ V Q+ L+
Sbjct: 1076WKGLLPRLMRIPPGQAIMWGVADQIIGLY 1162
>TC221832 similar to UP|Q75AH6 (Q75AH6) ADL049Wp, partial (3%)
Length = 675
Score = 43.9 bits (102), Expect = 8e-05
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
L+ G + G+ + PFD IK +LQ+Q IPG +Y + A+ + +EG +GLY+
Sbjct: 73 LVCGGLAGSTAALFTTPFDVIKTRLQTQ---IPGSANQYDSVLHALYKISKSEGFKGLYR 243
Query: 68 G 68
G
Sbjct: 244 G 246
>TC221857 similar to UP|Q8LFJ3 (Q8LFJ3) Contains similarity to peroxisomal
membrane carrier protein, partial (93%)
Length = 945
Score = 43.9 bits (102), Expect = 8e-05
Identities = 25/78 (32%), Positives = 39/78 (49%)
Frame = +1
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
+ G A +++ +PF I+ +LQ +P+ +PRY + VK+T E RG YKG
Sbjct: 655 VLGATSKLAAVLLTYPFQVIRARLQQRPSG--DGVPRYMDTLHVVKETARFESVRGFYKG 828
Query: 69 RGAPLATVAAFNAALFTV 86
A L A ++ F V
Sbjct: 829 ITANLLKNAPASSITFIV 882
Score = 40.4 bits (93), Expect = 9e-04
Identities = 34/122 (27%), Positives = 47/122 (37%), Gaps = 12/122 (9%)
Frame = +1
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG- 68
AG G A + V HP D ++ + Q + P Y AV +EG RGLY G
Sbjct: 37 AGAAAGFATVAVMHPLDVVRTRFQVNDGRV-SNFPSYKNTAHAVFTIARSEGLRGLYAGF 213
Query: 69 RGAPLATVAAFNAALFTVRGQMEALFRSHPG-----------AGAGLAVSFLVCPTELIK 117
L + +++ F + R+ G A AG VSF P L+K
Sbjct: 214 LPGVLGSTISWSLYFFFYDRAKQRYARNREGKLSPGLHLASAAEAGAIVSFFTNPVWLVK 393
Query: 118 CR 119
R
Sbjct: 394 TR 399
Score = 30.4 bits (67), Expect = 0.93
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
L + GA +P +K +LQ Q TP+ P YSG DA + + EG LY+
Sbjct: 328 LASAAEAGAIVSFFTNPVWLVKTRLQLQ-TPLHQTRP-YSGVYDAFRTIMREEGFSALYR 501
Query: 68 G 68
G
Sbjct: 502 G 504
>TC224733 similar to GB|AAP12888.1|30017309|BT006239 At5g48970 {Arabidopsis
thaliana;} , partial (61%)
Length = 1210
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Frame = +2
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPG---------QLPRYSGAIDAVKQTL 57
D AG + G V P D IK++ Q Q P +Y+G A K L
Sbjct: 215 DSWAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLAAASKYTGMFQATKDIL 394
Query: 58 AAEGPRGLYKGRGAPLATVAAFNAALFTV 86
EG +G ++G L V + A FTV
Sbjct: 395 REEGVQGFWRGNVPALLMVMPYTAIQFTV 481
>TC215270 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (31%)
Length = 585
Score = 41.6 bits (96), Expect = 4e-04
Identities = 25/84 (29%), Positives = 39/84 (45%)
Frame = +3
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
+ + K L+AG V G P + +K+ LQ Q P + +Y+G + +K E
Sbjct: 303 LASICKSLVAGGVAGGVSRTAVAPLERLKILLQVQN---PHNI-KYNGTVQGLKYIWRTE 470
Query: 61 GPRGLYKGRGAPLATVAAFNAALF 84
G RGL+KG A + +A F
Sbjct: 471 GFRGLFKGNDTNCAKIVPNSAVKF 542
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.341 0.150 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,021,865
Number of Sequences: 63676
Number of extensions: 126036
Number of successful extensions: 1066
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of query: 280
length of database: 12,639,632
effective HSP length: 96
effective length of query: 184
effective length of database: 6,526,736
effective search space: 1200919424
effective search space used: 1200919424
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0520.2