BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0437b.10
(101 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC232349 similar to UP|O81241 (O81241) Dc3 promoter-binding fact... 75 7e-15
TC213541 similar to UP|Q9LES3 (Q9LES3) Promoter-binding factor-l... 63 2e-11
TC222446 similar to UP|O81241 (O81241) Dc3 promoter-binding fact... 60 2e-10
BG155969 similar to PIR|T12622|T126 Dc3 promoter-binding factor-... 54 1e-08
TC229348 homologue to UP|Q94KA6 (Q94KA6) BZIP transcription fact... 50 2e-07
TC208968 similar to UP|GBF4_ARATH (P42777) G-box binding factor ... 43 2e-05
TC222296 similar to UP|P93426 (P93426) Leucine zipper protein, p... 43 2e-05
CO983201 42 5e-05
TC233650 similar to UP|Q84JC9 (Q84JC9) BZIP transcription factor... 40 2e-04
TC232589 similar to UP|Q8LK78 (Q8LK78) ABA response element bind... 40 2e-04
BI970547 weakly similar to GP|29027731|dbj bZIP transcription fa... 39 3e-04
TC205053 homologue to UP|Q8L5W2 (Q8L5W2) BZIP transcription fact... 28 0.55
BM308283 similar to GP|13346151|gb| bZIP protein {Arabidopsis th... 28 0.93
TC228829 similar to UP|Q9FMN3 (Q9FMN3) Emb|CAB53482.1, partial (... 26 2.7
TC207693 similar to UP|Q945B9 (Q945B9) Growth-on protein GRO11, ... 26 3.5
TC228232 homologue to UP|Q43449 (Q43449) G-box binding factor, c... 25 4.6
TC205903 similar to UP|Q41113 (Q41113) BZIP transcriptional repr... 25 4.6
TC225141 type 2 metallothionein [Glycine max] 25 6.0
TC227769 similar to UP|Q75VR0 (Q75VR0) Two-pore calcium channel,... 25 7.9
TC209241 similar to GB|AAS99693.1|46518423|BT012549 At2g26460 {A... 25 7.9
>TC232349 similar to UP|O81241 (O81241) Dc3 promoter-binding factor-3
(Fragment), partial (50%)
Length = 834
Score = 74.7 bits (182), Expect = 7e-15
Identities = 42/78 (53%), Positives = 51/78 (64%)
Frame = +3
Query: 9 VSNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVE 68
+S+ Q GRK EDM+E TV+RRQKRMIKN S A SRA KQAY N LE V LE E
Sbjct: 342 MSDTQTPGRKKSTSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEE 521
Query: 69 IERLMKQTAIQNLLTQIP 86
ERL K+ ++ +L+ P
Sbjct: 522 NERLRKRKELEQMLSCAP 575
>TC213541 similar to UP|Q9LES3 (Q9LES3) Promoter-binding factor-like
protein (ABA-responsive element binding protein 3)
(AREB3), partial (31%)
Length = 741
Score = 63.2 bits (152), Expect = 2e-11
Identities = 39/74 (52%), Positives = 44/74 (58%)
Frame = +1
Query: 13 QKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERL 72
Q GRK A ++VE V+RRQKRMIKN S A SRA KQAY LE V LE E ERL
Sbjct: 7 QTAGRKRDASGNVVEKIVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERL 186
Query: 73 MKQTAIQNLLTQIP 86
+Q I+ L P
Sbjct: 187RRQNEIERALPSAP 228
>TC222446 similar to UP|O81241 (O81241) Dc3 promoter-binding factor-3
(Fragment), partial (46%)
Length = 765
Score = 60.1 bits (144), Expect = 2e-10
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = +3
Query: 9 VSNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVE 68
+S+ Q GRK +VE TV+RRQKRMIKN S A SRA +QAY LE V LE E
Sbjct: 300 LSDTQTLGRKRGVSGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEE 479
Query: 69 IERLMKQTAIQNLLTQIP 86
ERL + ++ L +P
Sbjct: 480 NERLRRLNEMERALPSVP 533
>BG155969 similar to PIR|T12622|T126 Dc3 promoter-binding factor-2 - common
sunflower, partial (43%)
Length = 414
Score = 53.9 bits (128), Expect = 1e-08
Identities = 31/60 (51%), Positives = 37/60 (61%)
Frame = +2
Query: 27 ENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQTAIQNLLTQIP 86
E TV+RRQKRMIKN S A SRA +QAY LE V LE E ERL + ++ L +P
Sbjct: 2 EKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLRRLNEMERALPSVP 181
>TC229348 homologue to UP|Q94KA6 (Q94KA6) BZIP transcription factor 6,
partial (34%)
Length = 786
Score = 50.1 bits (118), Expect = 2e-07
Identities = 33/75 (44%), Positives = 40/75 (53%)
Frame = +1
Query: 3 TSSTYDVSNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV 62
TSS V + G + VE ++RRQ+RMIKN S A SRA KQAY LE V
Sbjct: 157 TSSVSPVPYVFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEV 336
Query: 63 *SLEVEIERLMKQTA 77
L+ E E L K+ A
Sbjct: 337 AKLKEENEELQKKQA 381
>TC208968 similar to UP|GBF4_ARATH (P42777) G-box binding factor 4
(AtbZIP40), partial (27%)
Length = 1199
Score = 43.1 bits (100), Expect = 2e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 10 SNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEI 69
+++QK R+ A+E+ V+ ++Q+RMIKN S A SR KQAY + LE V LE E
Sbjct: 479 NSVQKGKRR--AVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQEN 652
Query: 70 ERLMKQTA 77
+L+ + A
Sbjct: 653 VQLLNEEA 676
>TC222296 similar to UP|P93426 (P93426) Leucine zipper protein, partial (24%)
Length = 945
Score = 43.1 bits (100), Expect = 2e-05
Identities = 28/66 (42%), Positives = 41/66 (61%)
Frame = +3
Query: 10 SNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEI 69
+++QK R+ A+E+ V+ ++ +RMIKN S A SR KQAY + LE V LE E
Sbjct: 432 NSVQKGKRR--AVEEPVDKATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQEN 605
Query: 70 ERLMKQ 75
RL+K+
Sbjct: 606 ARLLKE 623
>CO983201
Length = 774
Score = 42.0 bits (97), Expect = 5e-05
Identities = 27/63 (42%), Positives = 33/63 (51%)
Frame = -3
Query: 24 DMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQTAIQNLLT 83
D E T++RR +R IKN A SRA KQAY N L V LE E +L K+ + L
Sbjct: 739 DAYEKTLERRLRRKIKNREXAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLL 560
Query: 84 QIP 86
P
Sbjct: 559 PDP 551
>TC233650 similar to UP|Q84JC9 (Q84JC9) BZIP transcription factor, partial
(17%)
Length = 792
Score = 39.7 bits (91), Expect = 2e-04
Identities = 29/95 (30%), Positives = 47/95 (48%), Gaps = 9/95 (9%)
Frame = +3
Query: 3 TSSTYDVSNIQKHGRKMMALEDMV--------ENTVDRRQKRMIKN*VSGASSRAVKQAY 54
TS++ V +I H ++++ + +D+R R+IKN S SRA KQAY
Sbjct: 225 TSTSSSVFHIHDHDHSLLSVSNTSFEASGSKKTTLLDQRHARIIKNRESAVRSRARKQAY 404
Query: 55 INVLERNV*SLEVEIERLMKQTA-IQNLLTQIPCC 88
LEVEI RL ++ + ++ L ++ CC
Sbjct: 405 RK-------GLEVEIARLTEENSRLKRQLKELQCC 488
>TC232589 similar to UP|Q8LK78 (Q8LK78) ABA response element binding factor,
partial (10%)
Length = 464
Score = 39.7 bits (91), Expect = 2e-04
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 3 TSSTYDVSNIQKHGRKMMALEDMVENTV-DRRQKRMIKN*VSGASSRAVKQAYINVLERN 61
TS++ S KH ++++ D NT+ D+R R+IKN S SRA KQAY
Sbjct: 257 TSTSSSSSVFHKHDHSLLSVSD--PNTLQDQRHTRVIKNRESAVRSRARKQAYRK----- 415
Query: 62 V*SLEVEIERLMKQTA 77
LEVEI RL ++ +
Sbjct: 416 --GLEVEISRLTEENS 457
>BI970547 weakly similar to GP|29027731|dbj bZIP transcription factor
{Arabidopsis thaliana}, partial (15%)
Length = 697
Score = 39.3 bits (90), Expect = 3e-04
Identities = 28/74 (37%), Positives = 39/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 3 TSSTYDVSNIQKHGRKMMALEDMVENTV-DRRQKRMIKN*VSGASSRAVKQAYINVLERN 61
T ++ S KH ++++ D NT+ D+R R+IKN S SRA KQAY LE
Sbjct: 574 TXTSSSSSVFHKHDHSLLSVSD--PNTLQDQRHTRVIKNRESAVRSRARKQAYRKGLEVE 401
Query: 62 V*SLEVEIERLMKQ 75
+ L E RL +Q
Sbjct: 400 ISRLTEENSRLKRQ 359
>TC205053 homologue to UP|Q8L5W2 (Q8L5W2) BZIP transcription factor ATB2,
partial (89%)
Length = 1432
Score = 28.5 bits (62), Expect = 0.55
Identities = 20/62 (32%), Positives = 31/62 (49%)
Frame = +2
Query: 23 EDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQTAIQNLL 82
ED+ R++KRMI N S SR KQ +++ L V L E ++++ N+
Sbjct: 776 EDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSV---NIT 946
Query: 83 TQ 84
TQ
Sbjct: 947 TQ 952
>BM308283 similar to GP|13346151|gb| bZIP protein {Arabidopsis thaliana},
partial (6%)
Length = 433
Score = 27.7 bits (60), Expect = 0.93
Identities = 15/28 (53%), Positives = 21/28 (74%)
Frame = +1
Query: 16 GRKMMALEDMVENTVDRRQKRMIKN*VS 43
GRK + ++ VE V+RRQ+R+IKN VS
Sbjct: 337 GRKRV-VDCHVEKVVERRQRRLIKNRVS 417
>TC228829 similar to UP|Q9FMN3 (Q9FMN3) Emb|CAB53482.1, partial (75%)
Length = 1178
Score = 26.2 bits (56), Expect = 2.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 64 SLEVEIERLMKQTAIQNLLTQIPCCFVHAFLTC 96
S ++E +R+MK+ + + CCF+ FLTC
Sbjct: 1013 SAKIENQRIMKE***KKIFFFPMCCFLIPFLTC 915
>TC207693 similar to UP|Q945B9 (Q945B9) Growth-on protein GRO11, partial
(32%)
Length = 1071
Score = 25.8 bits (55), Expect = 3.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 74 KQTAIQNLLTQIPCCFVHAFLTCI 97
K+ +++ LLT CC ++ +TC+
Sbjct: 915 KEGSVERLLTLRSCCLLYIAITCV 986
>TC228232 homologue to UP|Q43449 (Q43449) G-box binding factor, complete
Length = 1723
Score = 25.4 bits (54), Expect = 4.6
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 GRKMMALEDMVENTVD-RRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMK 74
GR++ E +++ + ++QKR N S SR KQA L++ V SL E + L +
Sbjct: 781 GREVALGEHWIQDERELKKQKRKQSNRESARRSRLRKQAECEELQKRVESLGSENQTLRE 960
Query: 75 Q 75
+
Sbjct: 961 E 963
>TC205903 similar to UP|Q41113 (Q41113) BZIP transcriptional repressor ROM1,
partial (46%)
Length = 827
Score = 25.4 bits (54), Expect = 4.6
Identities = 17/44 (38%), Positives = 23/44 (51%)
Frame = +1
Query: 32 RRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQ 75
+RQKR N S SR KQA L++ V SL E + L ++
Sbjct: 232 KRQKRKQSNRESARRSRLRKQAECEELQKRVESLGGENQTLREE 363
>TC225141 type 2 metallothionein [Glycine max]
Length = 912
Score = 25.0 bits (53), Expect = 6.0
Identities = 8/28 (28%), Positives = 14/28 (49%)
Frame = +1
Query: 74 KQTAIQNLLTQIPCCFVHAFLTCINSHP 101
K + L + C +H+ + C+N HP
Sbjct: 430 KLYVVSKLQNYVVCIMLHSGVLCLNKHP 513
>TC227769 similar to UP|Q75VR0 (Q75VR0) Two-pore calcium channel, partial (47%)
Length = 1534
Score = 24.6 bits (52), Expect = 7.9
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = -2
Query: 76 TAIQNLLTQIPCCFVHAFL 94
TA L Q+PC F+H FL
Sbjct: 1038 TAFDIYLLQLPCHFLHKFL 982
>TC209241 similar to GB|AAS99693.1|46518423|BT012549 At2g26460 {Arabidopsis
thaliana;} , partial (22%)
Length = 699
Score = 24.6 bits (52), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 77 AIQNLLTQIPCCFVHAFLTCINSHP 101
AI +L T++ C F H FL I S P
Sbjct: 419 AILHLHTELECSFWHCFLLLIVSCP 345
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.333 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,929,701
Number of Sequences: 63676
Number of extensions: 31378
Number of successful extensions: 384
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of query: 101
length of database: 12,639,632
effective HSP length: 77
effective length of query: 24
effective length of database: 7,736,580
effective search space: 185677920
effective search space used: 185677920
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 51 (24.3 bits)
Lotus: description of TM0437b.10