BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0437a.8
(446 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC204178 homologue to UP|TBB7_MAIZE (Q41784) Tubulin beta-7 chai... 901 0.0
TC204175 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chai... 877 0.0
TC204179 UP|TBB1_LUPAL (P37392) Tubulin beta-1 chain, complete 871 0.0
TC204177 homologue to UP|TBB1_ARATH (P12411) Tubulin beta-1 chai... 870 0.0
TC204180 homologue to UP|TBB_CICAR (Q39445) Tubulin beta chain, ... 868 0.0
TC204187 homologue to UP|TBB6_ARATH (P29514) Tubulin beta-6 chai... 862 0.0
TC204185 homologue to UP|TBB1_SOYBN (P12459) Tubulin beta-1 chai... 848 0.0
TC222968 homologue to UP|O18343 (O18343) Beta-tubulin, partial (... 431 e-144
TC204176 homologue to UP|Q8RU83 (Q8RU83) Tubulin beta-1 (Beta-tu... 488 e-138
TC204181 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chai... 436 e-122
TC203804 homologue to UP|Q6VAF9 (Q6VAF9) Alpha-tubulin 4, complete 384 e-107
TC203651 UP|TBA1_PEA (P46259) Tubulin alpha-1 chain, complete 382 e-106
TC204183 homologue to UP|TBB3_SOYBN (P28551) Tubulin beta chain ... 252 e-105
TC203740 homologue to UP|TBA2_MAIZE (P14641) Tubulin alpha-2 cha... 374 e-104
TC204182 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chai... 362 e-100
TC204184 homologue to UP|Q6TYR5 (Q6TYR5) Beta-tubulin 3, partial... 335 3e-92
TC203306 homologue to UP|TBA3_HORVU (Q9ZRR5) Tubulin alpha-3 cha... 323 8e-91
TC214501 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 328 2e-90
TC214605 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 327 9e-90
AW756982 similar to GP|15408819|db tubulin beta-4 chain {Oryza s... 311 4e-85
>TC204178 homologue to UP|TBB7_MAIZE (Q41784) Tubulin beta-7 chain (Beta-7
tubulin), complete
Length = 1720
Score = 901 bits (2328), Expect = 0.0
Identities = 435/446 (97%), Positives = 444/446 (99%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKY+GD+ELQLERINVYYNEA+GGRYV
Sbjct: 147 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 326
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 327 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 506
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 507 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 686
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
Sbjct: 687 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 866
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMM
Sbjct: 867 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 1046
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG
Sbjct: 1047CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 1226
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
Sbjct: 1227LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 1406
Query: 421 EYQQYQDATADEDEYEEEEEEEPVDA 446
EYQQYQDATADE+EYEEEEEEE + A
Sbjct: 1407EYQQYQDATADEEEYEEEEEEEEIGA 1484
>TC204175 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chain, complete
Length = 1653
Score = 877 bits (2265), Expect = 0.0
Identities = 423/442 (95%), Positives = 436/442 (97%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y GD+ELQLERINVYYNEA+ GR+V
Sbjct: 73 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQLERINVYYNEASCGRFV 252
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 253 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 432
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 433 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 612
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 613 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 792
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL+VPELTQQMWDSKNMM
Sbjct: 793 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMM 972
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKS+VCDIPP G
Sbjct: 973 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPTG 1152
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1153LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1332
Query: 421 EYQQYQDATADEDEYEEEEEEE 442
EYQQYQDATADEDEYEEEEEEE
Sbjct: 1333EYQQYQDATADEDEYEEEEEEE 1398
>TC204179 UP|TBB1_LUPAL (P37392) Tubulin beta-1 chain, complete
Length = 1929
Score = 871 bits (2251), Expect = 0.0
Identities = 419/443 (94%), Positives = 434/443 (97%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y GD ELQLER+NVYYNEA+ GR+V
Sbjct: 111 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDNELQLERVNVYYNEASCGRFV 290
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 291 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 470
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 471 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 650
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 651 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 830
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMM
Sbjct: 831 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 1010
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPP G
Sbjct: 1011CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 1190
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1191LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1370
Query: 421 EYQQYQDATADEDEYEEEEEEEP 443
EYQQYQDATAD++ YE E+EEEP
Sbjct: 1371EYQQYQDATADDEGYEYEDEEEP 1439
>TC204177 homologue to UP|TBB1_ARATH (P12411) Tubulin beta-1 chain, partial
(98%)
Length = 1663
Score = 870 bits (2248), Expect = 0.0
Identities = 420/444 (94%), Positives = 435/444 (97%), Gaps = 2/444 (0%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGD--AELQLERINVYYNEATGGR 58
MREILH+QGGQCGNQIG+KFWEVICDEHGID +GKY GD ++LQLERINVYYNEA+GGR
Sbjct: 52 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYTGDEASDLQLERINVYYNEASGGR 231
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
YVPRAVLMDLEPGTMDS+RSGP+G+IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 232 YVPRAVLMDLEPGTMDSIRSGPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 411
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 412 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 591
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTC
Sbjct: 592 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 771
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQMWD+KN
Sbjct: 772 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 951
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 952 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1131
Query: 359 KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
+ LKMS TFIGNSTSIQEMFRRVSEQFTAM+RRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 1132RNLKMSCTFIGNSTSIQEMFRRVSEQFTAMYRRKAFLHWYTGEGMDEMEFTEAESNMNDL 1311
Query: 419 VAEYQQYQDATADEDEYEEEEEEE 442
VAEYQQYQDATADEDEY+EEE EE
Sbjct: 1312VAEYQQYQDATADEDEYDEEEVEE 1383
>TC204180 homologue to UP|TBB_CICAR (Q39445) Tubulin beta chain, partial
(97%)
Length = 1729
Score = 868 bits (2242), Expect = 0.0
Identities = 417/447 (93%), Positives = 438/447 (97%), Gaps = 2/447 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYN--GDAELQLERINVYYNEATGGR 58
MREILH+QGGQCGNQIG+KFWEVICDEHGID +GKYN G++ +QLERINVYYNEA+GGR
Sbjct: 62 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYNEEGNSSIQLERINVYYNEASGGR 241
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
YVPRAVLMDLEPGTMDS+RSGP+G+IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 242 YVPRAVLMDLEPGTMDSIRSGPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 421
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 422 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 601
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISATMSGVTC
Sbjct: 602 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 781
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQMWD+KN
Sbjct: 782 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 961
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 962 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1141
Query: 359 KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
+ LKMSSTFIGNSTSIQEMFRRVSEQFTAM+RRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 1142RNLKMSSTFIGNSTSIQEMFRRVSEQFTAMYRRKAFLHWYTGEGMDEMEFTEAESNMNDL 1321
Query: 419 VAEYQQYQDATADEDEYEEEEEEEPVD 445
VAEYQQYQDATA+EDEYE++ +E+ D
Sbjct: 1322VAEYQQYQDATAEEDEYEDDGDEQQYD 1402
>TC204187 homologue to UP|TBB6_ARATH (P29514) Tubulin beta-6 chain, partial
(98%)
Length = 1882
Score = 862 bits (2226), Expect = 0.0
Identities = 413/446 (92%), Positives = 436/446 (97%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILH+QGGQCGNQIG+KFWEV+CDEHGID +GKY G+++LQLER+NVYYNEA+ GR+V
Sbjct: 53 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGKYVGNSDLQLERVNVYYNEASCGRFV 232
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 233 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 412
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 413 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 592
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 593 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 772
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMM
Sbjct: 773 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 952
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 953 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 1132
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
L M+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1133LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1312
Query: 421 EYQQYQDATADEDEYEEEEEEEPVDA 446
EYQQYQDATA++D E+EE++ V+A
Sbjct: 1313EYQQYQDATAEDDGEYEDEEDDDVEA 1390
>TC204185 homologue to UP|TBB1_SOYBN (P12459) Tubulin beta-1 chain, complete
Length = 1732
Score = 848 bits (2190), Expect = 0.0
Identities = 403/441 (91%), Positives = 426/441 (96%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILH+Q GQCGNQIG KFWEV+CDEHGID +G Y G++ LQLER+NVYYNEA+GGRYV
Sbjct: 149 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNSHLQLERVNVYYNEASGGRYV 328
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGPFG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 329 PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 508
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 509 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 688
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLIS TMSGVTCCL
Sbjct: 689 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 868
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LT+PELTQQMWD++NMM
Sbjct: 869 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMM 1048
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVD+QMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 1049CAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 1228
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
L MSSTF+GNSTSIQEMFRRVSEQFT MF+RKAFLHWYTGEGMDEMEFTEAESNMNDLVA
Sbjct: 1229LSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 1408
Query: 421 EYQQYQDATADEDEYEEEEEE 441
EYQQYQDATA +D +E+E+E
Sbjct: 1409EYQQYQDATAVDDHEDEDEDE 1471
>TC222968 homologue to UP|O18343 (O18343) Beta-tubulin, partial (66%)
Length = 1005
Score = 431 bits (1107), Expect(2) = e-144
Identities = 204/242 (84%), Positives = 229/242 (94%), Gaps = 1/242 (0%)
Frame = +1
Query: 206 ALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
ALYDICFRTLKL TPT+GDLNHL+SA MSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF
Sbjct: 181 ALYDICFRTLKLTTPTYGDLNHLVSAVMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHF 360
Query: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
FMVG APLTSRGSQQYRALTVPELTQQM+D+KNMM A+DPRHGRYLT +AMFRG+MS KE
Sbjct: 361 FMVGXAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRHGRYLTVAAMFRGRMSMKE 540
Query: 326 VDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQF 385
VDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPKGLKMS TFIGNST+IQE+F+R+S+QF
Sbjct: 541 VDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSVTFIGNSTAIQELFKRISDQF 720
Query: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADED-EYEEEEEEEPV 444
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA+E+ E++EEE E
Sbjct: 721 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEGEAEA 900
Query: 445 DA 446
+A
Sbjct: 901 EA 906
Score = 100 bits (250), Expect(2) = e-144
Identities = 49/57 (85%), Positives = 52/57 (90%)
Frame = +2
Query: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
MGTLLISKIREEYPDRMM +FSV PSPKVSDTVVEPYNATLSVHQLVEN+DE +D
Sbjct: 2 MGTLLISKIREEYPDRMMCSFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCID 172
>TC204176 homologue to UP|Q8RU83 (Q8RU83) Tubulin beta-1 (Beta-tubulin),
partial (57%)
Length = 824
Score = 488 bits (1255), Expect = e-138
Identities = 232/253 (91%), Positives = 244/253 (95%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y GD+ELQLERINVYYNEA+ GR+V
Sbjct: 63 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQLERINVYYNEASCGRFV 242
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 243 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 422
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP+RMMLTFSVFPSPKVS+TVV
Sbjct: 423 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPNRMMLTFSVFPSPKVSNTVV 602
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENAD+CMVLDNE LYDICF TLKL TP FGDLNHLISATMSGVTCCL
Sbjct: 603 EPYNATLSVHQLVENADKCMVLDNEXLYDICFHTLKLTTPXFGDLNHLISATMSGVTCCL 782
Query: 241 RFPGQLNSDLRKL 253
+FP QLNS+LRKL
Sbjct: 783 KFPSQLNSNLRKL 821
>TC204181 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chain, partial
(50%)
Length = 904
Score = 436 bits (1120), Expect = e-122
Identities = 211/217 (97%), Positives = 216/217 (99%)
Frame = +1
Query: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL+
Sbjct: 1 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALS 180
Query: 286 VPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI 345
VPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI
Sbjct: 181 VPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI 360
Query: 346 PNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 405
P+NVKS+VCDIPP GLKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE
Sbjct: 361 PHNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 540
Query: 406 MEFTEAESNMNDLVAEYQQYQDATADEDEYEEEEEEE 442
MEFTEAESNMNDLV+EYQQYQDATADEDEYEEEEEEE
Sbjct: 541 MEFTEAESNMNDLVSEYQQYQDATADEDEYEEEEEEE 651
>TC203804 homologue to UP|Q6VAF9 (Q6VAF9) Alpha-tubulin 4, complete
Length = 1692
Score = 384 bits (986), Expect = e-107
Identities = 185/451 (41%), Positives = 284/451 (62%), Gaps = 10/451 (2%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+
Sbjct: 133 MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 312
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 313 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 492
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 493 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 672
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 673 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 852
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 853 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1032
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 1033MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1212
Query: 359 --------KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1213TVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1392
Query: 411 AESNMNDLVAEYQQYQDATADEDEYEEEEEE 441
A DL A + Y++ A+ E ++E+E+
Sbjct: 1393AR---EDLAALEKDYEEVGAESGEGQDEDED 1476
>TC203651 UP|TBA1_PEA (P46259) Tubulin alpha-1 chain, complete
Length = 1725
Score = 382 bits (982), Expect = e-106
Identities = 182/451 (40%), Positives = 283/451 (62%), Gaps = 10/451 (2%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+
Sbjct: 102 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 281
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 282 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 461
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 462 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 641
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 642 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 821
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 822 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1001
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 1002MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1181
Query: 359 --------KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1182TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1361
Query: 411 AESNMNDLVAEYQQYQDATADEDEYEEEEEE 441
A ++ L +Y++ + D D+ E +++
Sbjct: 1362AREDLAALEKDYEEVGAESGDGDDDGEGDDD 1454
>TC204183 homologue to UP|TBB3_SOYBN (P28551) Tubulin beta chain (Fragment),
partial (50%)
Length = 851
Score = 252 bits (643), Expect(3) = e-105
Identities = 117/122 (95%), Positives = 122/122 (99%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKY+GD+ELQLERINVYYNEA+GGRYV
Sbjct: 240 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 419
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 420 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 599
Query: 121 RK 122
RK
Sbjct: 600 RK 605
Score = 85.1 bits (209), Expect(3) = e-105
Identities = 40/44 (90%), Positives = 42/44 (94%)
Frame = +2
Query: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV NAD C+VL+
Sbjct: 719 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVXNADXCLVLE 850
Score = 84.3 bits (207), Expect(3) = e-105
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
K AENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP
Sbjct: 604 KXAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 720
>TC203740 homologue to UP|TBA2_MAIZE (P14641) Tubulin alpha-2 chain (Alpha-2
tubulin), complete
Length = 1600
Score = 374 bits (961), Expect = e-104
Identities = 180/450 (40%), Positives = 279/450 (62%), Gaps = 10/450 (2%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + I GQ G Q+G WE+ C EH I G+ D + + N +++E G+
Sbjct: 61 MRECISIHIGQAGIQVGNACWELYCLEHAIQADGQMPSDKTIGGGDDAFNTFFSETGAGK 240
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E+ D LD
Sbjct: 241 HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIGDLCLD 420
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQG V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 421 RIRKLADNCTGLQGSLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 600
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 601 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 780
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 781 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 960
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 961 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAIIKTKRTIQFVDWCPTGFKCGINYQPP 1140
Query: 359 --------KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1141TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1320
Query: 411 AESNMNDLVAEYQQYQDATADEDEYEEEEE 440
A ++ L +Y++ + DE E+ +E
Sbjct: 1321AREDLAALEKDYEEVGAEATEGDEGEDGDE 1410
>TC204182 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chain, partial
(40%)
Length = 823
Score = 362 bits (929), Expect = e-100
Identities = 176/181 (97%), Positives = 179/181 (98%)
Frame = +3
Query: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
FMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 3 FMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 182
Query: 326 VDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQF 385
VDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKM+STFIGNSTSIQEMFRRVSEQF
Sbjct: 183 VDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQF 362
Query: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEEEEEEPVD 445
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEEEEEE +
Sbjct: 363 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEEEEEEEIA 542
Query: 446 A 446
A
Sbjct: 543 A 545
>TC204184 homologue to UP|Q6TYR5 (Q6TYR5) Beta-tubulin 3, partial (43%)
Length = 1030
Score = 335 bits (858), Expect = 3e-92
Identities = 167/211 (79%), Positives = 181/211 (85%), Gaps = 1/211 (0%)
Frame = +2
Query: 237 TCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT-QQMWD 295
TCCLR PGQLNSDLRKL VNLIPFPRLHFFMV FAPLTSRGSQ YR+LT+PELT +
Sbjct: 2 TCCLRCPGQLNSDLRKLVVNLIPFPRLHFFMVSFAPLTSRGSQHYRSLTIPELTPSNVGH 181
Query: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
+++ + HG YLTA AMFRGKMSTKEVD+QMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 182 AEHDVRRRSLWHGMYLTAPAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCD 361
Query: 356 IPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
IPP GL MSSTF+GNSTSIQEMFRRVSEQFT MF+RKAFLHWYT EGMDEMEFTEAESNM
Sbjct: 362 IPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTAEGMDEMEFTEAESNM 541
Query: 416 NDLVAEYQQYQDATADEDEYEEEEEEEPVDA 446
NDLVAEYQQYQDA A E+ E ++EE + A
Sbjct: 542 NDLVAEYQQYQDAAASEEGENEIDDEEAMAA 634
>TC203306 homologue to UP|TBA3_HORVU (Q9ZRR5) Tubulin alpha-3 chain, partial
(93%)
Length = 1671
Score = 323 bits (827), Expect(2) = 8e-91
Identities = 151/360 (41%), Positives = 231/360 (63%), Gaps = 2/360 (0%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+
Sbjct: 129 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 308
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 309 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVELCLD 488
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 489 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 668
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 669 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 848
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 849 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQLSVGEITNSAFEPSS 1028
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 1029MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQFVDWCPTGFKCGINYQPP 1208
Score = 29.6 bits (65), Expect(2) = 8e-91
Identities = 10/22 (45%), Positives = 15/22 (67%)
Frame = +2
Query: 386 TAMFRRKAFLHWYTGEGMDEME 407
T+ + + AF+HWY GEG + E
Sbjct: 1316 TSCYAKXAFVHWYVGEGYGKKE 1381
>TC214501 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (92%)
Length = 1514
Score = 328 bits (842), Expect = 2e-90
Identities = 154/399 (38%), Positives = 247/399 (61%), Gaps = 8/399 (2%)
Frame = +2
Query: 48 NVYYNEATGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
N +E GR V AV+ LEP + V G + Q+F P+ + G+ N++ + HY+
Sbjct: 47 NTCLSETXSGRDVRGAVVXXLEPAVVXXVPCGSYRQLFHPEQLISGKENGANDFXRXHYS 226
Query: 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 167
G E+++ LD VRK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F
Sbjct: 227 GGKEIVNLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 406
Query: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
+++PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN
Sbjct: 407 TIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR 586
Query: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
LIS +S +T LRF G +N D+ + NL+P+PR+HF + +AP+ S + L+VP
Sbjct: 587 LISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVP 766
Query: 288 ELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN 347
E+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P
Sbjct: 767 EITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPT 946
Query: 348 NVKSSVCDIPPK--------GLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
K + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY
Sbjct: 947 GFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYV 1126
Query: 400 GEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEE 438
GEGM+E EF+EA ++ L +Y++ A++DE E+
Sbjct: 1127GEGMEEGEFSEAREDLAALEKDYEEVGAEGAEDDEEGED 1243
>TC214605 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (77%)
Length = 1456
Score = 327 bits (837), Expect = 9e-90
Identities = 151/346 (43%), Positives = 227/346 (64%), Gaps = 2/346 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MREI+ I GQ G Q+G WE+ C EHGI G D+ + + N +++E G+
Sbjct: 128 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSFGVAHDAFNTFFSETGSGK 307
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 308 HVPRAVFVDLEPTVIDEVRCGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 487
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VRK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 488 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 667
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 668 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 847
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + L+VPE+T +++ +
Sbjct: 848 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 1027
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEW 344
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W
Sbjct: 1028MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDW 1165
>AW756982 similar to GP|15408819|db tubulin beta-4 chain {Oryza sativa
(japonica cultivar-group)}, partial (43%)
Length = 586
Score = 311 bits (797), Expect = 4e-85
Identities = 159/195 (81%), Positives = 169/195 (86%)
Frame = +2
Query: 139 LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADE 198
LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP P VSDTVVEPYNA LSVHQLV+NADE
Sbjct: 2 LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPCPNVSDTVVEPYNAALSVHQLVDNADE 181
Query: 199 CMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258
CMVLDNEALYDIC RTLKL TP++GDLNHLISAT++GVTC LR P QL SDLR LAVNLI
Sbjct: 182 CMVLDNEALYDICCRTLKLTTPSYGDLNHLISATLNGVTCSLRDPAQLISDLRILAVNLI 361
Query: 259 PFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFR 318
PFPRLH+ MVG APLTSRG QY ALTV LTQ MWD++NMMCAADPRHGR LTA M R
Sbjct: 362 PFPRLHYVMVGTAPLTSRGYPQYIALTVL*LTQLMWDAENMMCAADPRHGRDLTAYRMLR 541
Query: 319 GKMSTKEVDEQMINV 333
+ST +VDEQMI V
Sbjct: 542 R*ISTGDVDEQMIYV 586
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,344,967
Number of Sequences: 63676
Number of extensions: 238621
Number of successful extensions: 1919
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of query: 446
length of database: 12,639,632
effective HSP length: 100
effective length of query: 346
effective length of database: 6,272,032
effective search space: 2170123072
effective search space used: 2170123072
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0437a.8