BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0391.10
(1159 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220322 212 9e-55
TC232149 69 6e-24
TC210254 similar to GB|AAM26637.1|20855902|AY101516 AT3g06940/F1... 71 2e-12
TC222000 weakly similar to PIR|H84710|H84710 Mutator-like transp... 67 6e-11
BF425842 66 1e-10
BE806360 similar to GP|6175165|gb| Mutator-like transposase {Ara... 56 1e-07
TC232194 weakly similar to UP|Q9LSN6 (Q9LSN6) Arabidopsis thalia... 49 1e-05
TC212788 similar to GB|AAF04891.1|6175165|ATAC011437 Mutator-lik... 47 4e-05
TC215998 similar to UP|Q9LV44 (Q9LV44) Similarity to signal pept... 46 8e-05
TC227025 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate d... 46 8e-05
TC214511 weakly similar to PIR|C85356|C85356 glycine-rich protei... 46 8e-05
TC220753 45 2e-04
TC204097 homologue to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-bindin... 44 5e-04
TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, co... 44 5e-04
TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F2... 44 5e-04
TC204868 similar to UP|Q9LKY8 (Q9LKY8) Proline-rich protein, par... 43 7e-04
CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 42 0.002
TC222036 similar to PIR|E96668|E96668 protein F1N19.3 [imported]... 42 0.002
TC219729 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 41 0.003
BE211286 similar to GP|7267978|emb| auxilin-like protein {Arabid... 41 0.003
>TC220322
Length = 1264
Score = 212 bits (539), Expect = 9e-55
Identities = 95/179 (53%), Positives = 119/179 (66%)
Frame = +2
Query: 702 ECARARTIPEFNDKMDKLKAKNVQAWNYLNKWPKEAWTKAYFRDHPKIDNICNNACEAFN 761
+CA++ T+ EF M LK N QAW YLNKWPK+AWTKA+F PK+DNICNN CE FN
Sbjct: 2 QCAKSTTVAEFEGHMAHLKTINCQAWEYLNKWPKQAWTKAHFSTIPKVDNICNNTCEVFN 181
Query: 762 AKILKYRGKPILTLLEEVRCYIMRTVANNKMKLRGHQGMLPPLQQSRLEHQKEASNGWTP 821
+IL+YR KPI+T+LEE+R YIMRT+A K+KL G G L +Q RLE + +N WTP
Sbjct: 182 FRILQYRCKPIITMLEEIRSYIMRTMAARKVKLSGKPGPLCLVQYKRLEKEFHFANQWTP 361
Query: 822 VWCGDGDGYEYQLQCWGETVGVHLSNGTCHCRFWQLTGMPCKHVVAACAHKNEPPENYC 880
+WCGD G Y++ WG V V+L+ TC C WQLTGMPC+H +A E C
Sbjct: 362 IWCGDNMGLRYEVHMWGNKVEVNLAGWTCTCGVWQLTGMPCRHAIATITLTKEGSLRTC 538
Score = 113 bits (283), Expect = 4e-25
Identities = 64/175 (36%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Frame = +1
Query: 849 TCHCRFWQLTGMPCKHVVAACAHKNEPPENYCHAWLTMGAYRSTYEFYVHPTRSQQYWEP 908
TCHC +HK PE+ CH WL++ AY TY+ ++ P + QYW
Sbjct: 487 TCHCN--------------NNSHKGGKPEDMCHEWLSIEAYNKTYQHFIEPVQGPQYWAQ 624
Query: 909 TDYVKPLPPNVPKRKAGRPKRKRRRDATEQQVAGGSRTRLRRTYPDITCTRCGLTGHNSR 968
T Y P+PP + + GRPK+ R+R E V G +L+R + TC RCG T HN R
Sbjct: 625 TQYTHPVPP-YKRVQRGRPKKNRKRSVDEDNVTG---HKLKRKLAEFTCGRCGQTNHNIR 792
Query: 969 GCHRQGVSRMPRNWVPPPPEEPGQTENVDAQLGLQTEIDLSQSA--PNEIDVSQP 1021
C GV P+ +V P T N D L Q E L+++ P EI++SQP
Sbjct: 793 SCKNIGVPVRPKKYVAP------STANEDDHLLSQDEQALNEAEKDPVEINLSQP 939
>TC232149
Length = 1005
Score = 69.3 bits (168), Expect(2) = 6e-24
Identities = 42/138 (30%), Positives = 61/138 (43%), Gaps = 30/138 (21%)
Frame = -3
Query: 772 ILTLLEEVRCYIMRTVANNKMKLRGHQGMLPPLQQSRLEHQKEASNGWTPVWCGDGDGYE 831
IL + E++R YIM + ++K+K+ L P+QQSR+E K SN T W GD DG
Sbjct: 427 ILNMCEDIRTYIMCKMKSDKLKMATRLRPLVPMQQSRIEKGKVESNK*TANWVGDPDGTR 248
Query: 832 YQLQCWGETVGVHLSNGTCHCRFWQL------------------------------TGMP 861
+++ + + V L N + CR WQL GMP
Sbjct: 247 FKVCHYDTRLNVDLQN*SFTCRMWQLIGIPLS*LNLSILDIMYCVTMNLMFFWFIYIGMP 68
Query: 862 CKHVVAACAHKNEPPENY 879
C+H + A + PE Y
Sbjct: 67 CRHAIVAIRYNYHIPEGY 14
Score = 61.2 bits (147), Expect(2) = 6e-24
Identities = 32/70 (45%), Positives = 45/70 (63%)
Frame = -1
Query: 701 WECARARTIPEFNDKMDKLKAKNVQAWNYLNKWPKEAWTKAYFRDHPKIDNICNNACEAF 760
++CAR+ T EFN M +K N +AW YL+K P+E+WTKAYF ++ K E++
Sbjct: 618 YKCARSPTELEFNVIMKVVKRMNEKAWAYLDKGPRESWTKAYFSENCK-------DYESY 460
Query: 761 NAKILKYRGK 770
NAKILK + K
Sbjct: 459 NAKILKLKNK 430
>TC210254 similar to GB|AAM26637.1|20855902|AY101516 AT3g06940/F17A9_9
{Arabidopsis thaliana;} , partial (6%)
Length = 814
Score = 71.2 bits (173), Expect = 2e-12
Identities = 46/140 (32%), Positives = 64/140 (44%), Gaps = 7/140 (5%)
Frame = +1
Query: 838 GETVG-VHLSNGTCHCRFWQLTGMPCKHVVAACAHKNEPPENYCHAWLTMGAYRSTYEFY 896
GE+V V + N C C+ WQLTG+PC H +A P +YC + T+ YR TY
Sbjct: 49 GESVDIVDIDNWDCSCKGWQLTGVPCCHAIAVFECVGRSPYDYCSRYFTVENYRLTYAES 228
Query: 897 VHPT----RSQQYWEPTDYVKPLPPNVPKRKAGRPKRKRRR--DATEQQVAGGSRTRLRR 950
+HP + E T V +PP KR GRPK K+ D ++Q
Sbjct: 229 IHPVPNVDKPPVQGESTALVMVIPPPT-KRPPGRPKMKQVESIDIIKRQ----------- 372
Query: 951 TYPDITCTRCGLTGHNSRGC 970
+ C++C GHN + C
Sbjct: 373 ----LQCSKCKGLGHNRKTC 420
>TC222000 weakly similar to PIR|H84710|H84710 Mutator-like transposase
[imported] - Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (12%)
Length = 617
Score = 66.6 bits (161), Expect = 6e-11
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Frame = +2
Query: 843 VHLSNGTCHCRFWQLTGMPCKHVVAACAHKNEPPENYCHAWLTMGAYRSTYEFYVHPTRS 902
V++ + +C CR WQL G+PC H AA + + T ++R TY +HP
Sbjct: 20 VNIGSHSCSCRDWQLNGIPCSHAAAALISCRKDVYAFSQKCFTAASFRDTYAETIHPIPG 199
Query: 903 QQYWEPT------DYVKPLPPNVPKRKAGRPKRKRRRDATEQQVAGGSRTRLRRTYPDIT 956
+ W T D + + P +R GRP+++ D L R +
Sbjct: 200 KLEWSKTGNSSMDDNILVVRPPKLRRPPGRPEKRMCVD------------DLNREKHTVH 343
Query: 957 CTRCGLTGHNSRGCHRQGVS 976
C+RC TGH R C + ++
Sbjct: 344 CSRCNQTGHYKRTCKAEMIN 403
>BF425842
Length = 414
Score = 65.9 bits (159), Expect = 1e-10
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +3
Query: 527 RIYICLDGCKRGFKAGCRPLIGLDGCFLKGYYGGQLLSAVGQDANNHLYVIAYAVVNVEN 586
R++ + C GFK C+PL+ +DG FL G Y LL+A+GQD + + +A+A+V E
Sbjct: 30 RVF*AFNPCIEGFKY-CKPLVQVDGTFLTGKYNDTLLTAIGQDGSRDNFPLAFAIVESET 206
Query: 587 KDNWKWFLELL 597
K+ W WFL L
Sbjct: 207 KEAWIWFLHYL 239
>BE806360 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (17%)
Length = 431
Score = 55.8 bits (133), Expect = 1e-07
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 2/189 (1%)
Frame = +2
Query: 578 AYAVVNVENKDNWKWFLELLH--ADLGDYQQYGWCFISDMQKVTFSVKYLLYFLGLVWKI 635
A+ VV+ EN DNW WFL LH ++ +SD QK
Sbjct: 2 AFGVVDEENDDNWMWFLSELHNLLEIHTENMLRLTILSDRQK------------------ 127
Query: 636 VYSFED*LE*S*DL*GLM*MFYVFDQGLIPAMQEVMPGVHHRFCAMHLWRNFTKQWKDKE 695
G++ ++ P H FC HL +F K++ +
Sbjct: 128 --------------------------GIVDGVEASFPTAFHGFCMQHLSDSFRKEFNNTM 229
Query: 696 MKNVVWECARARTIPEFNDKMDKLKAKNVQAWNYLNKWPKEAWTKAYFRDHPKIDNICNN 755
+ N++WE A A T E N K + K +++ W AYF H + ++ N
Sbjct: 230 LVNLLWEAANALT--ELNLKQRFWRLKRYHKMLHIDSRIPSLWATAYFEGH-RFGHLTAN 400
Query: 756 ACEAFNAKI 764
E+ I
Sbjct: 401 IVESLTLDI 427
>TC232194 weakly similar to UP|Q9LSN6 (Q9LSN6) Arabidopsis thaliana genomic
DNA, chromosome 3, TAC clone:K14A17, partial (40%)
Length = 550
Score = 48.9 bits (115), Expect = 1e-05
Identities = 42/129 (32%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Frame = +2
Query: 93 PKPLSMIPPPPPPP----PPPPAGEDGAVVVIESIVADEDGLGCGVGNVSEEGSGIGAED 148
P P+S + P PPP P PP + +S +G G G GSGIG
Sbjct: 131 PSPMSPLAPSTPPPSRSLPAPPTSLTPPLPSTDSAPTPPPPIGFGGGG----GSGIGKGG 298
Query: 149 GNERVN-GEGSEIGADNGNERVTGEGSGIGSVHGNERVTGEGSGIGACNGNESVTGEGSG 207
G V G GS G G G+G G+G G TG G G +S G G
Sbjct: 299 GGSGVGIGSGSGSGGVQGGG---GQGRGVGIGSGVGSGTGYGGGGTGIGSGDSSRGGGGR 469
Query: 208 IGGVHGNER 216
GV ER
Sbjct: 470 FAGVGY*ER 496
Score = 38.9 bits (89), Expect = 0.013
Identities = 31/87 (35%), Positives = 35/87 (39%), Gaps = 4/87 (4%)
Frame = -2
Query: 91 PHPKPLSMIPPPPPPPPPPPAGEDGAVVVIESIVADEDGLGCGVGNVSEEGSGIGAED-- 148
P P+P P P PPPPP P G G GVG S +GSG G D
Sbjct: 315 PTPEPPPPFPIPLPPPPPNPIG------------------GGGVGAESVDGSG-GVRDVG 193
Query: 149 --GNERVNGEGSEIGADNGNERVTGEG 173
G ER G D G+ V G+G
Sbjct: 192 GAGRERDGGGVEGAKGDIGDGIVEGDG 112
Score = 36.2 bits (82), Expect = 0.086
Identities = 28/76 (36%), Positives = 33/76 (42%), Gaps = 9/76 (11%)
Frame = -2
Query: 91 PHPKPLSMIPPPPP----PPPPPPAGEDGAVVVIESIVADEDGLGCGVGNVSEEGSGIGA 146
P P+P+ PPPP PPPPP G V ES+ D G VG E G G
Sbjct: 333 PLPEPIPTPEPPPPFPIPLPPPPPNPIGGGGVGAESV--DGSGGVRDVGGAGRERDGGGV 160
Query: 147 ED-----GNERVNGEG 157
E G+ V G+G
Sbjct: 159 EGAKGDIGDGIVEGDG 112
Score = 30.8 bits (68), Expect = 3.6
Identities = 15/70 (21%), Positives = 37/70 (52%)
Frame = +1
Query: 1026 PEVNYPHNFTSSLYYNEIINSI*FLVVGNFKCFS*SNAHSSS*RWQSKKEFK*GHKRWYR 1085
P V++ +T+++ ++ +++ + ++ S HSS+ W ++ +K KRW+
Sbjct: 136 PNVSFGTFYTTTVPFSSCSSNVSYATTSIYRFRS----HSSTTYWIWRRWWKWNWKRWWW 303
Query: 1086 KKGWYRKKRW 1095
+ W R ++W
Sbjct: 304 LRRWNRLRKW 333
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Frame = -1
Query: 1082 RWYRKKG------WYRKKRWYMKKR*KRW--ERCK 1108
RW+R W+RK+RW +KR RW RC+
Sbjct: 253 RWWRSGSGICRWKWWRKRRWRSRKRTGRWWCRRCQ 149
>TC212788 similar to GB|AAF04891.1|6175165|ATAC011437 Mutator-like
transposase {Arabidopsis thaliana;} , partial (11%)
Length = 646
Score = 47.4 bits (111), Expect = 4e-05
Identities = 28/104 (26%), Positives = 50/104 (47%), Gaps = 7/104 (6%)
Frame = +3
Query: 308 DDDNNSYCSEDLHSPVSTDDEGNCRVKQ-------TFPQFDETAGYGNIHLELGMEFPNL 360
D D N+ S +S + D + V+ T P + L +G EFP++
Sbjct: 303 DLDENTALSVVQNSDMGIDSANDMDVQHPQLVAVSTPPIIQARTASPSYELSVGQEFPDV 482
Query: 361 QSFKEAVIDYTVEVGRQIRWLKNDKDRCRAECMGETCKWKIYCA 404
+S + A+ D + + +++ +K+DK R A+C E C W+I+ A
Sbjct: 483 KSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIHAA 614
>TC215998 similar to UP|Q9LV44 (Q9LV44) Similarity to signal peptidase,
partial (33%)
Length = 542
Score = 46.2 bits (108), Expect = 8e-05
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -1
Query: 56 SEDIVLNELSTDRDIMDICKAAKLNSGEIEIYFEHPHPKPLSMI-----PPPPPPPPPPP 110
SE + L + DR+ +I +AA E+ F H P S PPPP PPPPPP
Sbjct: 377 SEGMNLGSATNDRNASEIARAASTVFASSEVKFNHSDKGPSSFSASRSPPPPPSPPPPPP 198
Query: 111 AGED 114
D
Sbjct: 197 LSSD 186
>TC227025 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate
dehydrogenase, complete
Length = 2097
Score = 46.2 bits (108), Expect = 8e-05
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Frame = -1
Query: 121 ESIVADEDGLGCGVGNVSEEGSGIG---AEDGNERVNGEGSEIGADNGNERVTGEGSGIG 177
E ++ DG CG G V E+G G AEDG R++G G ++G D+G+ G G G G
Sbjct: 525 EGVIVLHDGGRCGEGGVGEDGDAAGLRFAEDG--RLDG-GGDVGVDDGDAAEGGHGGGHG 355
Query: 178 SV------HGNERVTGEGSGIGACNGNESVTGEGSGIGGVHGNERVAVEDVNEIVNEE 229
+ GN+R G G A V GS + V G + + V E + EE
Sbjct: 354 GLRHGVHRRGNKR---HGKGKAAREARGEVHDVGSEV-DVVGEKDDVIVCVGEALREE 193
>TC214511 weakly similar to PIR|C85356|C85356 glycine-rich protein [imported]
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(88%)
Length = 1085
Score = 46.2 bits (108), Expect = 8e-05
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 129 GLGCGVGNVSEEGSGIGAEDGNERVNGEGSEIGADNGNERVTGE--GSGIGSVHGNERVT 186
GLG G+G S G+G GA G+ +G S + + + + GSG GS G+ +
Sbjct: 500 GLGLGIGGGSGSGAGAGAGSGSGSGSGSSSSSASSSASSSSSSGSGGSGAGSEAGSYAGS 679
Query: 187 GEGSGIGACNGNESVTGEGSGIGGVHGN 214
GSG G G G G G GG G+
Sbjct: 680 RAGSGSGRSQGRGGGGGGGGGGGGGGGS 763
Score = 36.6 bits (83), Expect = 0.066
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P P P PPPPPPPPPPP
Sbjct: 783 PSP*P*PEPPPPPPPPPPPP 724
Score = 36.2 bits (82), Expect = 0.086
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P P P PPPPPPPPPPP
Sbjct: 765 PEPPP----PPPPPPPPPPP 718
Score = 35.0 bits (79), Expect = 0.19
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPP 109
P P+P PPPPPPPPPP
Sbjct: 771 P*PEPPPPPPPPPPPPPPP 715
Score = 34.3 bits (77), Expect = 0.33
Identities = 34/104 (32%), Positives = 46/104 (43%), Gaps = 6/104 (5%)
Frame = +2
Query: 116 AVVVIESIVADEDGLGCGVGNVSEEGSGIGAEDGNERVNGEGSEIGADNGNERVTGEGSG 175
+ +V ES VA +D LG +G G G+G G G GS GA G +G GSG
Sbjct: 419 STIVSESRVARKD-LGLDLG-----GLGVGLGLGLGLGIGGGSGSGAGAGAGSGSGSGSG 580
Query: 176 IGSVHGNERVTGE------GSGIGACNGNESVTGEGSGIGGVHG 213
S + + GSG G+ G+ + + GSG G G
Sbjct: 581 SSSSSASSSASSSSSSGSGGSGAGSEAGSYAGSRAGSGSGRSQG 712
Score = 33.1 bits (74), Expect = 0.72
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P P P PPPPPPPPPP
Sbjct: 789 P*PSP*P*PEPPPPPPPPPP 730
Score = 32.7 bits (73), Expect = 0.95
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -3
Query: 89 EHPHPKPLSMIPPPPPPPPPPP 110
E P P P PPPPPPPPP P
Sbjct: 762 EPPPPPP----PPPPPPPPPLP 709
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/63 (34%), Positives = 26/63 (40%)
Frame = +2
Query: 131 GCGVGNVSEEGSGIGAEDGNERVNGEGSEIGADNGNERVTGEGSGIGSVHGNERVTGEGS 190
G G G+ + +G A G+ R G G G G G G G G HG GEG
Sbjct: 638 GSGAGSEAGSYAGSRAGSGSGRSQGRGGGGGGGGGG----GGGGGSGYGHGEGYGHGEGY 805
Query: 191 GIG 193
G G
Sbjct: 806 GQG 814
>TC220753
Length = 1312
Score = 44.7 bits (104), Expect = 2e-04
Identities = 32/136 (23%), Positives = 55/136 (39%), Gaps = 3/136 (2%)
Frame = +2
Query: 838 GETVGVHLSNGTCHCRFWQLTGMPCKHVVAACAHKNEPPENYCHAWLTMGAYRSTYEFYV 897
G V L+ C +Q +PC H +AACA N +++ + Y+ +
Sbjct: 200 GMACTVKLNEWLCDYGQFQALRLPCSHAIAACAFCNLNYDDFVDPVYKLENIFKVYQHHF 379
Query: 898 HPTRSQQYWEPTDYVKP---LPPNVPKRKAGRPKRKRRRDATEQQVAGGSRTRLRRTYPD 954
H S+ W Y+ P P+ ++ +GRP R + ++ + RL++
Sbjct: 380 HSLGSEDTW--PQYLGPHFMSDPSKRRQISGRPATTRIHNEMDESIP----NRLKK---- 529
Query: 955 ITCTRCGLTGHNSRGC 970
C+ C GHN C
Sbjct: 530 --CSLCKTEGHNQSNC 571
>TC204097 homologue to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein,
partial (82%)
Length = 764
Score = 43.5 bits (101), Expect = 5e-04
Identities = 16/30 (53%), Positives = 21/30 (69%)
Frame = -1
Query: 91 PHPKPLSMIPPPPPPPPPPPAGEDGAVVVI 120
P+P P + PPPPPPPPPPP + ++ VI
Sbjct: 536 PYPPPPRLYPPPPPPPPPPPPRD*ASLTVI 447
Score = 34.7 bits (78), Expect = 0.25
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 90 HPHPKPLSMIPPPPPPPPPP 109
+P P L PPPPPPPPPP
Sbjct: 533 YPPPPRLYPPPPPPPPPPPP 474
>TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, complete
Length = 1937
Score = 43.5 bits (101), Expect = 5e-04
Identities = 16/30 (53%), Positives = 21/30 (69%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPPPAGEDGAVVVI 120
P+P P + PPPPPPPPPPP + ++ VI
Sbjct: 1542 PYPPPPRLYPPPPPPPPPPPPRD*ASLTVI 1453
Score = 34.7 bits (78), Expect = 0.25
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 90 HPHPKPLSMIPPPPPPPPPP 109
+P P L PPPPPPPPPP
Sbjct: 1539 YPPPPRLYPPPPPPPPPPPP 1480
Score = 31.2 bits (69), Expect = 2.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPP 109
P P S+ PP PPPPPPP
Sbjct: 1668 PRE*PRSLPPP*PPPPPPP 1612
Score = 30.8 bits (68), Expect = 3.6
Identities = 15/41 (36%), Positives = 19/41 (45%), Gaps = 10/41 (24%)
Frame = -3
Query: 90 HPHPKPLSMIPPP----------PPPPPPPPAGEDGAVVVI 120
+P P P + PP PPPPPPPP D A + +
Sbjct: 1578 YPPPPPPPPLRPPYPPPPRLYPPPPPPPPPPPPRD*ASLTV 1456
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPP 109
P P P S + PPPPPPPP
Sbjct: 1608 PPP*PPSRLRYPPPPPPPP 1552
Score = 30.8 bits (68), Expect = 3.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 99 IPPPPPPPPPPP 110
+PPP PPPPPPP
Sbjct: 1647 LPPP*PPPPPPP 1612
Score = 30.0 bits (66), Expect = 6.1
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3
Query: 100 PPPPPPPPPPP 110
PPPPPPP PPP
Sbjct: 1632 PPPPPPP*PPP 1600
Score = 29.6 bits (65), Expect = 8.0
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -3
Query: 93 PKPLSMIPPPPPPP-----PPPP 110
P L PPPPPPP PPPP
Sbjct: 1593 PSRLRYPPPPPPPPLRPPYPPPP 1525
>TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F28L1_7
{Arabidopsis thaliana;} , partial (26%)
Length = 1081
Score = 43.5 bits (101), Expect = 5e-04
Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Frame = +3
Query: 89 EHPHPKPLSMIPPPPPPPP--PPPAGEDGAVVVIESIVADEDGLGCGVGNVSEEGSGIGA 146
+HP K + M PP PP P G +GA ++ S++ + G G N + G G G
Sbjct: 204 QHPLNKMMMMKPPMGAKPPIGSVPMG-NGAQMMSNSMMNAQKGGNGGGNNGKKGGGGSGG 380
Query: 147 E---------DGNERVNGEGSEI-GADNGNERVTGEGSGIGSVHGNERVTGEGSGIGACN 196
GNE NG G + G GN + G G+ N G G G N
Sbjct: 381 PVPVQVHNMGGGNEGKNGNGGKKEGGGGGNNQTQGGGN-----KNNGGKNGGGVPEGK-N 542
Query: 197 GNESVTGEGSGIGGVHGN 214
GN G G GI +GN
Sbjct: 543 GNNKNNGGGGGIPNNNGN 596
>TC204868 similar to UP|Q9LKY8 (Q9LKY8) Proline-rich protein, partial (91%)
Length = 865
Score = 43.1 bits (100), Expect = 7e-04
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -2
Query: 129 GLGCGVGNVSEEGSGIGAEDGNERVNGEGSE-IGADNGNERVTGEGSGIGSVHGNERVTG 187
G+G GVG V G G G E G + G G +G V G G G+G V V G
Sbjct: 363 GVGFGVGGVG--GVGFGGEGGGQPALGVGGVGVGVGGVGFGVGGVGFGVGGVGFG--VGG 196
Query: 188 EGSGIGACNGNESVTGEGSGIGG 210
G G+G G G+G G+GG
Sbjct: 195 VGFGVGGVGGVGFGDGDGVGVGG 127
Score = 30.4 bits (67), Expect = 4.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 91 PHPKPLSMIPPPPPPPPPPPAGEDG 115
P PKP P P P PP PP + G
Sbjct: 344 PTPKPTPPTPTPTPTPPTPPTPKAG 418
Score = 29.6 bits (65), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P PKP PP P P PP P
Sbjct: 149 PSPKPTPPTPPTPKPTPPTP 208
>CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (23%)
Length = 159
Score = 42.0 bits (97), Expect = 0.002
Identities = 15/21 (71%), Positives = 16/21 (75%)
Frame = -1
Query: 91 PHPKPLSMIPPPPPPPPPPPA 111
P P PL PPPPPPPPPPP+
Sbjct: 132 PPPSPLXXPPPPPPPPPPPPS 70
Score = 38.1 bits (87), Expect = 0.023
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = -2
Query: 91 PHPKPL---SMIPPPPPPPPPPP 110
P P PL S PPPPPPPPPPP
Sbjct: 143 PPPPPLLLXSXXPPPPPPPPPPP 75
Score = 36.6 bits (83), Expect = 0.066
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 91 PHPKPLSMIPPPPPPPPPPPAG 112
P P P P PPPPPPPPP G
Sbjct: 102 PPPPPPPPPPSPPPPPPPPPPG 37
Score = 35.4 bits (80), Expect = 0.15
Identities = 15/24 (62%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = -3
Query: 91 PHPKPLSM----IPPPPPPPPPPP 110
P P P S PPPPPPPPPPP
Sbjct: 145 PPPPPPSFSXLXAPPPPPPPPPPP 74
Score = 34.3 bits (77), Expect = 0.33
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P P P PPPPPPP PPP
Sbjct: 104 PPPPPPPPPPPPPPPPXPPP 45
Score = 34.3 bits (77), Expect = 0.33
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 91 PHPKPLSMIPPPPPPPPPPP 110
P P P PPPPPPPP PP
Sbjct: 107 PPPPPPPPPPPPPPPPPXPP 48
Score = 33.9 bits (76), Expect = 0.42
Identities = 13/21 (61%), Positives = 14/21 (65%)
Frame = -3
Query: 91 PHPKPLSMIPPPPPPPPPPPA 111
P P P + PPPP PPPP PA
Sbjct: 94 PPPPPPPLPPPPPXPPPPRPA 32
Score = 32.0 bits (71), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 6/24 (25%)
Frame = -1
Query: 93 PKPLSMIPPPPP------PPPPPP 110
P PL PPPPP PPPPPP
Sbjct: 159 PPPLPPPPPPPPSPLXXPPPPPPP 88
Score = 30.8 bits (68), Expect = 3.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 100 PPPPPPPPPPPA 111
PP PPPPPPPP+
Sbjct: 156 PPLPPPPPPPPS 121
>TC222036 similar to PIR|E96668|E96668 protein F1N19.3 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(48%)
Length = 622
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Frame = -3
Query: 135 GNVSEEGSGIGAEDGNERVNGEGSEIGADNGNER-------------VTGEGSGIGSVHG 181
G +G G+ E G ++ G ++ N +E V GEG+ + +G
Sbjct: 410 GGPQAQGKGLNGEGGGHVLSPAGGDLSGRNEHEADLSAVVEKLERAVVVGEGASVRVPNG 231
Query: 182 NERVTGEGSGIGACNGNESVTGEGSGIGGVHGNERVAVEDVNEIVNEEENRRRNDK 237
V GEG GA +G GEG + G HG+ V + +E+ +E+ N + + +
Sbjct: 230 G--VLGEGEVDGAVSG-----GEGRDLDGAHGDFGVLRLEHSEVNDEDHNEKEDQE 84
>TC219729 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (7%)
Length = 785
Score = 40.8 bits (94), Expect = 0.003
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +3
Query: 91 PHPKPLSMIPPPP-----PPPPPPPAGEDGAVVVIESIVADEDG 129
P PKPL + PPPP PPPP PP G G ++ + DG
Sbjct: 288 PPPKPLPLPPPPPVVVECPPPPKPPCGGGGVDCLLPTFPETPDG 419
Score = 37.4 bits (85), Expect = 0.038
Identities = 21/58 (36%), Positives = 25/58 (42%)
Frame = +3
Query: 54 TVSEDIVLNELSTDRDIMDICKAAKLNSGEIEIYFEHPHPKPLSMIPPPPPPPPPPPA 111
TVS L + R + D CK P PKP+ PPP PPPP PP+
Sbjct: 93 TVSSTSTLEKHQVPRIMCDECKLPP----------PPPPPKPIECPPPPSPPPPIPPS 236
Score = 30.8 bits (68), Expect = 3.6
Identities = 22/74 (29%), Positives = 29/74 (38%), Gaps = 3/74 (4%)
Frame = -2
Query: 142 SGIGAEDGNERVNGEGSEIGADNGNERVT---GEGSGIGSVHGNERVTGEGSGIGACNGN 198
SG+ + G+++ G G T G GSG G G +TG G G G
Sbjct: 415 SGVSGKVGSKQSTPPPPHGGFGGGGHSTTTGGGGGSGSGFGGGGHLITGGGGDGGNGGGG 236
Query: 199 ESVTGEGSGIGGVH 212
+ G G GG H
Sbjct: 235 DGGIGGGGDGGGGH 194
Score = 29.6 bits (65), Expect = 8.0
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +3
Query: 93 PKPLSMIPPPPPP---PPPPP 110
P P+ PPPP P PPPPP
Sbjct: 264 PPPVIKCPPPPKPLPLPPPPP 326
>BE211286 similar to GP|7267978|emb| auxilin-like protein {Arabidopsis
thaliana}, partial (3%)
Length = 420
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -3
Query: 117 VVVIESIVADE---DGLGCGVGNVSEEGSGIGAEDGNERVNGEGSEIGADNGNERVT-GE 172
V V++ V D DGLG +G +++G G+ E EGS G D G T G
Sbjct: 400 VFVVDRFVEDRSVVDGLGTEIGGGAKDGGGVAEEIV------EGSGGGVDGGIGGATSGS 239
Query: 173 GSGIGSVHGNERVTGEGSGIGACNGNESVTGEGSGIGG 210
G+ I G+ V G G G G C+ G IGG
Sbjct: 238 GT*IEVERGSFVVVGGGGGFGCCHWCRFALGFEPEIGG 125
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.139 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,369,847
Number of Sequences: 63676
Number of extensions: 1277577
Number of successful extensions: 35316
Number of sequences better than 10.0: 628
Number of HSP's better than 10.0 without gapping: 11932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22569
length of query: 1159
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1051
effective length of database: 5,762,624
effective search space: 6056517824
effective search space used: 6056517824
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0391.10