TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0382.4
         (684 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE824323                                                               30  2.7
TC223621 weakly similar to UP|Q9FNI5 (Q9FNI5) Gb|AAC80581.1, par...    30  3.5
BM732581                                                               29  7.9

>BE824323 
          Length = 555

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 31  FDHSEIPKFKICCMKEKITLPFLRKPPQLLYNLMNEINDRY 71
           F+HSE P    CC+     +    KP  + +   NE  ++Y
Sbjct: 356 FEHSEFPTIDSCCVSSSTGITMCSKPLSVPFTTPNESYNKY 478


>TC223621 weakly similar to UP|Q9FNI5 (Q9FNI5) Gb|AAC80581.1, partial (5%)
          Length = 436

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/31 (41%), Positives = 20/31 (63%), Gaps = 1/31 (3%)
 Frame = +1

Query: 7  YLGDASYVC-SNCQSIMWYEEEAVKFDHSEI 36
          Y+ D +Y+C   CQ+  WY  EAV+ + S+I
Sbjct: 34 YMSDLTYICCETCQN--WYHAEAVELEESKI 120


>BM732581 
          Length = 457

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -1

Query: 516 GCKVKGSLKHGMTLIR*YQLSYRILCYILLCQQQFQII*CMVHV 559
           G  + GSL + +      Q  + +LC++ LC Q   ++ C+VH+
Sbjct: 337 GEAITGSLSNSL------QTLFLLLCHLHLCLQTLDVVDCLVHL 224


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.345    0.151    0.500 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,596,718
Number of Sequences: 63676
Number of extensions: 484817
Number of successful extensions: 4474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3282
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 1148
Number of HSP's gapped (non-prelim): 3466
length of query: 684
length of database: 12,639,632
effective HSP length: 104
effective length of query: 580
effective length of database: 6,017,328
effective search space: 3490050240
effective search space used: 3490050240
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 62 (28.5 bits)